HHsearch alignment for GI: 254780827 and conserved domain: KOG3308
>KOG3308 consensus.
Probab=99.42 E-value=4.4e-13 Score=108.43 Aligned_cols=140 Identities=23% Similarity=0.319 Sum_probs=100.3
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH-HHCHHHCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 876799952786667337999999999733898689995088758826887-6000201898133128999999997412
Q gi|254780827|r 81 KIPFVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLT-ANNLMQRKGFPESYDSNKLLTFLSDVKS 159 (311)
Q Consensus 81 k~PfIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~-~~~l~~rkGfPeS~D~~~L~~~L~~lK~ 159 (311)
T Consensus 2 ~K~~ivgiSG~TnsGKTTLak~l~~~f---~--~~~lIhqDDFyKp~~Ei~v~~~n~~~wd~~esLdm~~fl~~ia~~l~ 76 (225)
T KOG3308 2 MKTLIVGISGCTNSGKTTLAKSLHRFF---P--GCSLIHQDDFYKPENEIEVDYNNIDNWDLLESLDMEKFLEKIATWLD 76 (225)
T ss_pred CEEEEEEEECCCCCCHHHHHHHHHHHC---C--CCEEECCCCCCCCHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHC
T ss_conf 618999864246787768999999873---6--87464022346755342112377211101314209999878888850
Q ss_pred CCCEEEEECCC--CCCCCC---CCCC-EEEECCCCEEEEECCHHCCCCCCCCCCCCCEEECCCCCEEEEEECCHHHHHHH
Q ss_conf 66405874044--322565---8983-69986896599706100357654575777401000231157730889998879
Q gi|254780827|r 160 GKKKVAVPRYS--HSQYDI---LEGE-YDTIIQPDILLIEGINVLQQNSLSDNQKATPMISDFLDFSIYIDADKRDIHRW 233 (311)
Q Consensus 160 G~~~V~~PvYs--h~~~D~---vp~~-~~vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~fD~sIyVDad~~~i~~w 233 (311)
T Consensus 77 ~~~--~~~~ar~~~v~~~~~~~~~~~~q~~~~~~~iviidGfmiy~y~p----------~~~~~d~~im~~~~y~~~krR 144 (225)
T KOG3308 77 SRH--NAPEAREHLVSYANFEHYAQQFQIKAYKNHIVIIDGFMIYNYKP----------QVDLFDRIIMLTLDYETCKRR 144 (225)
T ss_pred CCC--CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEECCH----------HHHHHHHHEEEECCHHHHHHH
T ss_conf 755--56337565411667777764227520027679983614772632----------664555210220439999876
Q ss_pred HHHH
Q ss_conf 9887
Q gi|254780827|r 234 YLNR 237 (311)
Q Consensus 234 yi~R 237 (311)
T Consensus 145 r~~R 148 (225)
T KOG3308 145 REAR 148 (225)
T ss_pred HCCC
T ss_conf 2365