HHsearch alignment for GI: 254780827 and conserved domain: KOG3354

Probab=97.15  E-value=0.0024  Score=42.45  Aligned_cols=81  Identities=21%  Similarity=0.266  Sum_probs=46.8

Q ss_pred             CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC-HHHHHHHCHHHC-C-CCHHHHHHHHHHHH
Q ss_conf             76678767999527866673379999999997338986899950887588-268876000201-8-98133128999999
Q gi|254780827|r   77 KEESKIPFVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFP-NAVLTANNLMQR-K-GFPESYDSNKLLTF  153 (311)
Q Consensus        77 ~~~~k~PfIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~-n~~l~~~~l~~r-k-GfPeS~D~~~L~~~  153 (311)
T Consensus         6 ~t~~~~k~~i~vmGvsGsGKSTigk~L~~~l~------~~F~dgDd~Hp~~NveKM~~GipLnD~DR~pWL~~i~--~~~   77 (191)
T KOG3354           6 KTMGPFKYVIVVMGVSGSGKSTIGKALSEELG------LKFIDGDDLHPPANVEKMTQGIPLNDDDRWPWLKKIA--VEL   77 (191)
T ss_pred             CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHC------CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHH--HHH
T ss_conf             56677760599983588774459999999858------8624555579878899883699888532117999999--999


Q ss_pred             HHHHHCCCCEEE
Q ss_conf             997412664058
Q gi|254780827|r  154 LSDVKSGKKKVA  165 (311)
Q Consensus       154 L~~lK~G~~~V~  165 (311)
T Consensus        78 ~~~l~~~q~vVl   89 (191)
T KOG3354          78 RKALASGQGVVL   89 (191)
T ss_pred             HHHHHCCCEEEE
T ss_conf             987632781899