HHsearch alignment for GI: 254780827 and conserved domain: PRK00698
>PRK00698 tmk thymidylate kinase; Validated.
Probab=96.72 E-value=0.016 Score=36.89 Aligned_cols=130 Identities=19% Similarity=0.145 Sum_probs=60.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEE--EECCCCCCHHHHHHHCHHHCC--CCHHHHH------H-HHHHHH
Q ss_conf 9995278666733799999999973389868999--508875882688760002018--9813312------8-999999
Q gi|254780827|r 85 VVGITGSVAVGKSTFARILCILLQQISNFKVSLI--TTDGFLFPNAVLTANNLMQRK--GFPESYD------S-NKLLTF 153 (311)
Q Consensus 85 IIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~li--s~DgF~~~n~~l~~~~l~~rk--GfPeS~D------~-~~L~~~ 153 (311)
T Consensus 5 fIviEGiDGsGKsTq~~~L~~~L~~~g-~~v~~t~eP~~t~---~g~~ir~~~~~~~~~~~~~~~~lLf~adR~~~~~~~ 80 (204)
T PRK00698 5 FITIEGIDGAGKSTQIELLAERLEEQG-RDVVFTREPGGTP---LGEKLRELLLDPNEPMDDKTELLLFLAARAQHLEEV 80 (204)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCC-CCEEEEECCCCCC---HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 999988999989999999999999679-9789986999980---699999998277767998999999999999999999
Q ss_pred HH-HHHCCCCEEEEECCCCC--CCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCCCCCCEEECCCCCEEEEEECCHHHH
Q ss_conf 99-74126640587404432--2565898369986896599706100357654575777401000231157730889998
Q gi|254780827|r 154 LS-DVKSGKKKVAVPRYSHS--QYDILEGEYDTIIQPDILLIEGINVLQQNSLSDNQKATPMISDFLDFSIYIDADKRDI 230 (311)
Q Consensus 154 L~-~lK~G~~~V~~PvYsh~--~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~fD~sIyVDad~~~i 230 (311)
T Consensus 81 I~p~L~~g~-iVI~DRy~~S~~aYqg~~------~~~~~~~i~~l~~~~~~~~------------~PDl~i~Ldv~~e~~ 141 (204)
T PRK00698 81 IKPALARGK-WVISDRFIDSSLAYQGGG------RGLDIDLLAALNRFALGGF------------RPDLTLYLDVPPEVG 141 (204)
T ss_pred HHHHHHCCC-EEEEECCCCHHHHHHHHC------CCCCHHHHHHHHHHHHCCC------------CCCEEEEEECCHHHH
T ss_conf 998883699-899836405099999860------7999999999998872799------------998589981799999
Q ss_pred HHHHHHH
Q ss_conf 8799887
Q gi|254780827|r 231 HRWYLNR 237 (311)
Q Consensus 231 ~~wyi~R 237 (311)
T Consensus 142 ~~Ri~~R 148 (204)
T PRK00698 142 LARIAAR 148 (204)
T ss_pred HHHHHHC
T ss_conf 9999837