HHsearch alignment for GI: 254780827 and conserved domain: PRK06067
>PRK06067 flagellar accessory protein FlaH; Validated.
Probab=95.36 E-value=0.033 Score=34.71 Aligned_cols=41 Identities=22% Similarity=0.212 Sum_probs=29.7
Q ss_pred CCCCEEEEEECCCCCCHHHHHH-HHHHHHHHCCCCCEEEEEECC
Q ss_conf 7876799952786667337999-999999733898689995088
Q gi|254780827|r 80 SKIPFVVGITGSVAVGKSTFAR-ILCILLQQISNFKVSLITTDG 122 (311)
Q Consensus 80 ~k~PfIIGIAG~~asGKST~Ar-~L~~lL~~~~~~~V~lis~Dg 122 (311)
T Consensus 29 ~p~g~~~li~G~~G~GKt~~~~~f~~~~~~--~g~~~~~~~~ee 70 (241)
T PRK06067 29 IPFGSLILIEGENDTGKSVLSQQFVWGALN--QGKRGLAITTEN 70 (241)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHH--CCCEEEEEEECC
T ss_conf 779908999807998879999999999986--798299999428