HHsearch alignment for GI: 254780827 and conserved domain: PRK06762
>PRK06762 hypothetical protein; Provisional.
Probab=97.68 E-value=8.8e-05 Score=52.18 Aligned_cols=103 Identities=17% Similarity=0.268 Sum_probs=65.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 99952786667337999999999733898689995088758826887600020189813312899999999741266405
Q gi|254780827|r 85 VVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLTANNLMQRKGFPESYDSNKLLTFLSDVKSGKKKV 164 (311)
Q Consensus 85 IIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~~~~l~~rkGfPeS~D~~~L~~~L~~lK~G~~~V 164 (311)
T Consensus 4 LIiiRGNSgSGKtT~Ak~L~~~~---G-~g~lLvsQD~v--------RR~mLr~kD~~g~~~i~Li~~~~~y---g~--- 65 (166)
T PRK06762 4 LIIIRGNSGSGKTTIAKQLQERL---G-RGTLLVSQDVV--------RRDMLRVKDGPGNLSIDLIEQLVRY---GL--- 65 (166)
T ss_pred EEEEECCCCCCHHHHHHHHHHHH---C-CCCEEEEHHHH--------HHHHHHCCCCCCCCCHHHHHHHHHH---HH---
T ss_conf 89997888888789999999986---8-88578537589--------9998405577999786899999999---98---
Q ss_pred EEECCCCCCCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCCCCCCEEECCCCC---EEEEEECCHHHH
Q ss_conf 874044322565898369986896599706100357654575777401000231---157730889998
Q gi|254780827|r 165 AVPRYSHSQYDILEGEYDTIIQPDILLIEGINVLQQNSLSDNQKATPMISDFLD---FSIYIDADKRDI 230 (311)
Q Consensus 165 ~~PvYsh~~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~fD---~sIyVDad~~~i 230 (311)
T Consensus 66 --------------------~~~~~VIlEGIL~a~~-----Yg~ml~~l~~~~~~~~~~YY~Di~FeET 109 (166)
T PRK06762 66 --------------------QHCEFVILEGILNSDR-----YGPMLKELIHLFGGNAYTYYFDLSFEET 109 (166)
T ss_pred --------------------HCCCEEEEEEECCHHH-----HHHHHHHHHHHCCCCEEEEEEECCHHHH
T ss_conf --------------------5699899974100448-----9999999998657866999994877999