HHsearch alignment for GI: 254780827 and conserved domain: PRK06995

>PRK06995 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=97.75  E-value=0.00016  Score=50.49  Aligned_cols=80  Identities=24%  Similarity=0.266  Sum_probs=52.9

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHH-HCCCCCEEEEEECCCCCCHHHHHHHCHHHCCCCH--HHHHHHHHHHHHHHHHCCC
Q ss_conf             999527866673379999999997-3389868999508875882688760002018981--3312899999999741266
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILLQ-QISNFKVSLITTDGFLFPNAVLTANNLMQRKGFP--ESYDSNKLLTFLSDVKSGK  161 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL~-~~~~~~V~lis~DgF~~~n~~l~~~~l~~rkGfP--eS~D~~~L~~~L~~lK~G~  161 (311)
T Consensus       178 V~alVGPTGVGKTTTiAKLAAr~~l~~g~~kVaLIT~DTY-RIgAvEQLktYa~IlgvPv~vv~~~~eL~~aL~~l~~~-  255 (404)
T PRK06995        178 VFALVGPTGVGKTTTTAKLAARCVMRHGASKVALLTTDSY-RIGGHEQLRIYGKILGVPVHAVKDAADLRLALAELRNK-  255 (404)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCC-CHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCC-
T ss_conf             5898668887637589999999999838983799976875-47899999999987595599959999999999970899-


Q ss_pred             CEEEE
Q ss_conf             40587
Q gi|254780827|r  162 KKVAV  166 (311)
Q Consensus       162 ~~V~~  166 (311)
T Consensus       256 dlILI  260 (404)
T PRK06995        256 HIVLI  260 (404)
T ss_pred             CEEEE
T ss_conf             99998