HHsearch alignment for GI: 254780827 and conserved domain: PRK08356
>PRK08356 hypothetical protein; Provisional.
Probab=97.82 E-value=2.1e-05 Score=56.38 Aligned_cols=123 Identities=25% Similarity=0.332 Sum_probs=67.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHC-------HHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 799952786667337999999999733898689995088758826887600-------0201898133128999999997
Q gi|254780827|r 84 FVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLTANN-------LMQRKGFPESYDSNKLLTFLSD 156 (311)
Q Consensus 84 fIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~~~~-------l~~rkGfPeS~D~~~L~~~L~~ 156 (311)
T Consensus 6 mIIgitG~~gSGK~tva~~l~~~----G---~~~~s~sd~lrd--~~~~~~~~~~~~~e~~~~~e~tre~l~~~~~~LR~ 76 (195)
T PRK08356 6 MIVGIAGKIAAGKTTVAKFLEEL----G---FCRISCSEPLID--ILTGNVSDYSWVPEVPFKGEPTRENLIELGRYLKE 76 (195)
T ss_pred EEEEEECCCCCCHHHHHHHHHHC----C---CEEEECCHHHHH--HHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 69998589988789999999986----9---928842278999--98402320001155551479988999999999999
Q ss_pred HHCCCCEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCHHCCCCCCCCCCCCCEEECCCCCEEEEEECCHHHHHHHHHH
Q ss_conf 41266405874044322565898369986896599706100357654575777401000231157730889998879988
Q gi|254780827|r 157 VKSGKKKVAVPRYSHSQYDILEGEYDTIIQPDILLIEGINVLQQNSLSDNQKATPMISDFLDFSIYIDADKRDIHRWYLN 236 (311)
Q Consensus 157 lK~G~~~V~~PvYsh~~~D~vp~~~~vi~~pdIIIvEGi~vL~~~~l~~~~~~~~~vsD~fD~sIyVDad~~~i~~wyi~ 236 (311)
T Consensus 77 -~~G~~-i~a~----~~~~----~---i~~~~~vVIdgiR~~~Ev---------e~lk~~~~~lI~V~A~~~~R~eRl~~ 134 (195)
T PRK08356 77 -KYGED-ILIR----LAVD----K---LRHCKNIAIDGVRSRGEV---------EAIKRMGGKVIYVEAKPEIRFERLRR 134 (195)
T ss_pred -HHCCH-HHHH----HHHH----H---HHCCCCEEEECCCCHHHH---------HHHHHCCCEEEEEECCHHHHHHHHHH
T ss_conf -86925-8999----9999----9---744897899489988999---------99996599799996778789999997
Q ss_pred H
Q ss_conf 7
Q gi|254780827|r 237 R 237 (311)
Q Consensus 237 R 237 (311)
T Consensus 135 R 135 (195)
T PRK08356 135 R 135 (195)
T ss_pred C
T ss_conf 6