HHsearch alignment for GI: 254780827 and conserved domain: PRK09302
>PRK09302 circadian clock protein KaiC; Reviewed.
Probab=95.21 E-value=0.083 Score=32.05 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=19.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC--CCCCEEEEEEC
Q ss_conf 99952786667337999999999733--89868999508
Q gi|254780827|r 85 VVGITGSVAVGKSTFARILCILLQQI--SNFKVSLITTD 121 (311)
Q Consensus 85 IIGIAG~~asGKST~Ar~L~~lL~~~--~~~~V~lis~D 121 (311)
T Consensus 26 ~~LV~G~pGsGKTtla--~QfL~~Ga~~~GE~~lyitl~ 62 (501)
T PRK09302 26 PTLVSGTAGTGKTLFA--LQFLHNGIKSFGEPGVFVTFE 62 (501)
T ss_pred EEEEEECCCCCHHHHH--HHHHHHHHHHCCCCEEEEECC
T ss_conf 7999838999999999--999999988559978999857