HHsearch alignment for GI: 254780827 and conserved domain: PRK09302

>PRK09302 circadian clock protein KaiC; Reviewed.
Probab=95.21  E-value=0.083  Score=32.05  Aligned_cols=35  Identities=26%  Similarity=0.304  Sum_probs=19.6

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHC--CCCCEEEEEEC
Q ss_conf             99952786667337999999999733--89868999508
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILLQQI--SNFKVSLITTD  121 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL~~~--~~~~V~lis~D  121 (311)
T Consensus        26 ~~LV~G~pGsGKTtla--~QfL~~Ga~~~GE~~lyitl~   62 (501)
T PRK09302         26 PTLVSGTAGTGKTLFA--LQFLHNGIKSFGEPGVFVTFE   62 (501)
T ss_pred             EEEEEECCCCCHHHHH--HHHHHHHHHHCCCCEEEEECC
T ss_conf             7999838999999999--999999988559978999857