HHsearch alignment for GI: 254780827 and conserved domain: PRK09361
>PRK09361 radB DNA repair and recombination protein RadB; Provisional.
Probab=94.90 E-value=0.06 Score=32.99 Aligned_cols=51 Identities=22% Similarity=0.253 Sum_probs=33.5
Q ss_pred HHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 987167766787679995278666733799999999973389868999508875
Q gi|254780827|r 71 NKFLNLKEESKIPFVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFL 124 (311)
Q Consensus 71 ~~fl~~~~~~k~PfIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~ 124 (311)
T Consensus 13 D~~LgG--Gi~~G~itei~G~pG~GKTtl~lq~a~~~~~-~g~~vlYidtE~~~ 63 (224)
T PRK09361 13 DELLGG--GIERGTITQIYGPPGSGKTNICIQLAVEAAR-QGKKVIYIDTEGLS 63 (224)
T ss_pred HHHHCC--CCCCCEEEEEECCCCCCHHHHHHHHHHHHHH-CCCCEEEECCCCCC
T ss_conf 986269--9888879999899998599999999999997-49909996787678