HHsearch alignment for GI: 254780827 and conserved domain: PRK09452
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed.
Probab=95.51 E-value=0.013 Score=37.57 Aligned_cols=102 Identities=19% Similarity=0.310 Sum_probs=53.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHH--------------CC--CCCEEEEEECCCCCCHH-HHHH--HCHHHCCCCHHHH
Q ss_conf 9995278666733799999999973--------------38--98689995088758826-8876--0002018981331
Q gi|254780827|r 85 VVGITGSVAVGKSTFARILCILLQQ--------------IS--NFKVSLITTDGFLFPNA-VLTA--NNLMQRKGFPESY 145 (311)
Q Consensus 85 IIGIAG~~asGKST~Ar~L~~lL~~--------------~~--~~~V~lis~DgF~~~n~-~l~~--~~l~~rkGfPeS~ 145 (311)
T Consensus 45 ~~~llGpSGsGKSTLlr~iaGl~~p~sG~I~~~G~~v~~~~~~~R~ig~VfQ~~aLfp~lTV~eNv~~~l~-~~~~~~~e 123 (378)
T PRK09452 45 FLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLR-MQKTPAAE 123 (378)
T ss_pred EEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCEECCCCCHHHCCEEEEECCCCCCCCCCHHHHHHHHHH-HCCCCHHH
T ss_conf 99999899976999999997699998469999999989899789885899227643789869999998997-65998799
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCCCCE-------EEECCCCEEEEEC
Q ss_conf 289999999974126640587404-432256589836-------9986896599706
Q gi|254780827|r 146 DSNKLLTFLSDVKSGKKKVAVPRY-SHSQYDILEGEY-------DTIIQPDILLIEG 194 (311)
Q Consensus 146 D~~~L~~~L~~lK~G~~~V~~PvY-sh~~~D~vp~~~-------~vi~~pdIIIvEG 194 (311)
T Consensus 124 ~~~rv~e~L~~v~L~-------~~~~r~p~~LSGGqqQRVaiARAL~~~P~vLLLDE 173 (378)
T PRK09452 124 ITPRVMEALRMVQLE-------EFAQRKPHQLSGGQQQRVAIARAVVNKPKVLLLDE 173 (378)
T ss_pred HHHHHHHHHHHCCCH-------HHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 999999998750734-------35436835499889999999998623998999578