HHsearch alignment for GI: 254780827 and conserved domain: PRK11889

Probab=97.53  E-value=0.00069  Score=46.13  Aligned_cols=77  Identities=22%  Similarity=0.224  Sum_probs=46.6

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCHHHCCCCH--HHHHHHHHHHHHHHHH
Q ss_conf             87679995278666733799999999973389868999508875882688760002018981--3312899999999741
Q gi|254780827|r   81 KIPFVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLTANNLMQRKGFP--ESYDSNKLLTFLSDVK  158 (311)
Q Consensus        81 k~PfIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~~~~l~~rkGfP--eS~D~~~L~~~L~~lK  158 (311)
T Consensus       239 ~~~q~IALVGPTGVGKTTTIAKLAArf~-~~~KkVALITtDTY-RIGAVEQLKTYAeIMgVPV~VV~dp~eL~~AL~~lk  316 (436)
T PRK11889        239 KEVQTIALIGPTGVGKTTTLAKMAWQFH-GKKKTVGFITTDHS-RIGTVQQLQDYVKTIGFEVIAVRDEAAMTRALTYFK  316 (436)
T ss_pred             HHCEEEEEECCCCCCHHHHHHHHHHHHH-CCCCEEEEEECCCC-HHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHH
T ss_conf             4171799989999888999999999986-16980899980663-476999999999984994399688899999999876


Q ss_pred             C
Q ss_conf             2
Q gi|254780827|r  159 S  159 (311)
Q Consensus       159 ~  159 (311)
T Consensus       317 d  317 (436)
T PRK11889        317 E  317 (436)
T ss_pred             H
T ss_conf             3