HHsearch alignment for GI: 254780827 and conserved domain: PRK12723

Probab=97.71  E-value=0.0002  Score=49.79  Aligned_cols=78  Identities=19%  Similarity=0.190  Sum_probs=48.5

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC---CCCEEEEEECCCCCCHHHHHHHCHHHCCCCH--HHHHHHHHHHHHH
Q ss_conf             8767999527866673379999999997338---9868999508875882688760002018981--3312899999999
Q gi|254780827|r   81 KIPFVVGITGSVAVGKSTFARILCILLQQIS---NFKVSLITTDGFLFPNAVLTANNLMQRKGFP--ESYDSNKLLTFLS  155 (311)
Q Consensus        81 k~PfIIGIAG~~asGKST~Ar~L~~lL~~~~---~~~V~lis~DgF~~~n~~l~~~~l~~rkGfP--eS~D~~~L~~~L~  155 (311)
T Consensus       172 ~k~~vi~lVGPTGvGKTTTiAKLAa~~~l~~~~k~~~V~lit~Dty-RigAveQLktya~il~vp~~v~~~~~dl~~~l~  250 (388)
T PRK12723        172 LKKRIFILVGPTGVGKTTTIAKLAAIYGINSDDKSLNIKIITIDNY-RIGAKKQIQTYGDIMGIPVKAIESFKDLKEEIT  250 (388)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC-CHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHH
T ss_conf             5762899989988757879999999999862676773799980787-588999999999997880698578899999999


Q ss_pred             HHHC
Q ss_conf             7412
Q gi|254780827|r  156 DVKS  159 (311)
Q Consensus       156 ~lK~  159 (311)
T Consensus       251 ~~~~  254 (388)
T PRK12723        251 QSKD  254 (388)
T ss_pred             HHCC
T ss_conf             7249