HHsearch alignment for GI: 254780827 and conserved domain: PRK13643

Probab=96.51  E-value=0.0081  Score=38.89  Aligned_cols=104  Identities=23%  Similarity=0.330  Sum_probs=52.0

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHC-CC---------------------CCEEEEEE--CCCCCCHHHHHH--HCHHHC
Q ss_conf             99952786667337999999999733-89---------------------86899950--887588268876--000201
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILLQQI-SN---------------------FKVSLITT--DGFLFPNAVLTA--NNLMQR  138 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL~~~-~~---------------------~~V~lis~--DgF~~~n~~l~~--~~l~~r  138 (311)
T Consensus        34 ~vaiiG~nGsGKSTLl~~l~Gll~p~~G~V~~~~~~i~~~~~~~~~~~~~~~vG~VfQ~p~~ql~~~tV~e~vafg~-~n  112 (288)
T PRK13643         34 YTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQLFEETVLKDVAFGP-QN  112 (288)
T ss_pred             EEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHH-HH
T ss_conf             99999999947999999997488888856999999856877354479877517999977732024336999999899-98


Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCE-------EEECCCCEEEEEC
Q ss_conf             8981331289999999974126640587404432256589836-------9986896599706
Q gi|254780827|r  139 KGFPESYDSNKLLTFLSDVKSGKKKVAVPRYSHSQYDILEGEY-------DTIIQPDILLIEG  194 (311)
Q Consensus       139 kGfPeS~D~~~L~~~L~~lK~G~~~V~~PvYsh~~~D~vp~~~-------~vi~~pdIIIvEG  194 (311)
T Consensus       113 ~g~~~~e~~~~v~~~l~~vgl~d-----~~~~r~p~~LSGGqkqRvaiA~aLa~~P~vLlLDE  170 (288)
T PRK13643        113 FGIPKEKAEKIAAEKLEMVGLAD-----EFWEKSPFELSGGQMRRVAIAGILAMEPEVLVLDE  170 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCHH-----HHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             69998999999999999759936-----67527976399999999999999974999999958