HHsearch alignment for GI: 254780827 and conserved domain: TIGR00174

>TIGR00174 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro: IPR002627 tRNA isopentenyltransferases 2.5.1.8 from EC also known as tRNA delta(2)-isopentenylpyrophosphate transferases or IPP transferases. These enzymes modify both cytoplasmic and mitochondrial tRNAs at A(37) to give isopentenyl A(37) .; GO: 0004811 tRNA isopentenyltransferase activity, 0005524 ATP binding, 0008033 tRNA processing.
Probab=95.50  E-value=0.013  Score=37.48  Aligned_cols=66  Identities=27%  Similarity=0.390  Sum_probs=38.9

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC-C---------CHH-HHH--HHCHHHCCCCHHHHHHHHHH
Q ss_conf             9995278666733799999999973389868999508875-8---------826-887--60002018981331289999
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFL-F---------PNA-VLT--ANNLMQRKGFPESYDSNKLL  151 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~-~---------~n~-~l~--~~~l~~rkGfPeS~D~~~L~  151 (311)
T Consensus         1 vi~i~GpTAvGKs~L~i~La~------~lnaEiI~~DS~qiYK~~dIgtaKp~~~e~~~ipH~l~Dildp~e~y~~~~F~   74 (307)
T TIGR00174         1 VIVIMGPTAVGKSNLAIQLAK------KLNAEIISVDSMQIYKGMDIGTAKPSLQERKGIPHHLIDILDPSESYSAADFQ   74 (307)
T ss_pred             CEEEEECCCCCHHHHHHHHHH------HCCEEEEECCCHHHHCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCHHHH
T ss_conf             967740885547789999887------68957874350232237875357889687534981585134712003708899


Q ss_pred             HHHHH
Q ss_conf             99997
Q gi|254780827|r  152 TFLSD  156 (311)
Q Consensus       152 ~~L~~  156 (311)
T Consensus        75 ~~~~~   79 (307)
T TIGR00174        75 TQALN   79 (307)
T ss_pred             HHHHH
T ss_conf             99999