HHsearch alignment for GI: 254780827 and conserved domain: TIGR03269
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=95.68 E-value=0.0071 Score=39.26 Aligned_cols=19 Identities=42% Similarity=0.728 Sum_probs=7.8
Q ss_pred EEEEECCCCCCHHHHHHHH
Q ss_conf 9995278666733799999
Q gi|254780827|r 85 VVGITGSVAVGKSTFARIL 103 (311)
Q Consensus 85 IIGIAG~~asGKST~Ar~L 103 (311)
T Consensus 28 i~~LvG~sGsGKSTL~~~l 46 (520)
T TIGR03269 28 VLGILGRSGAGKSVLMHVL 46 (520)
T ss_pred EEEEECCCCCHHHHHHHHH
T ss_conf 9999999996999999999