HHsearch alignment for GI: 254780827 and conserved domain: TIGR03345

>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system.
Probab=94.80  E-value=0.25  Score=28.81  Aligned_cols=44  Identities=32%  Similarity=0.459  Sum_probs=29.0

Q ss_pred             HCCCCCCCCCE-EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf             16776678767-9995278666733799999999973389868999508
Q gi|254780827|r   74 LNLKEESKIPF-VVGITGSVAVGKSTFARILCILLQQISNFKVSLITTD  121 (311)
Q Consensus        74 l~~~~~~k~Pf-IIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~D  121 (311)
T Consensus       587 aGl~-d~~rPigsFLFlGPTGVGKTElAK~LA~~L--Fg~-e~~liR~D  631 (852)
T TIGR03345       587 AGLE-DPRKPLGVFLLVGPSGVGKTETALALAELL--YGG-EQNLITIN  631 (852)
T ss_pred             CCCC-CCCCCCEEEEEECCCCCCHHHHHHHHHHHH--CCC-CCCEEEEC
T ss_conf             1799-999985689987899877899999999997--198-61147842