HHsearch alignment for GI: 254780827 and conserved domain: TIGR03453
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=95.29 E-value=0.076 Score=32.29 Aligned_cols=49 Identities=24% Similarity=0.323 Sum_probs=35.8
Q ss_pred HHHHHCCCCCCCCCEEEEEE---CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 99871677667876799952---78666733799999999973389868999508
Q gi|254780827|r 70 YNKFLNLKEESKIPFVVGIT---GSVAVGKSTFARILCILLQQISNFKVSLITTD 121 (311)
Q Consensus 70 ~~~fl~~~~~~k~PfIIGIA---G~~asGKST~Ar~L~~lL~~~~~~~V~lis~D 121 (311)
T Consensus 91 ~~~~~p~R~~g~~~~VIav~N~KGG--VGKTTtav~LA~~LA~~-G~RVLvIDLD 142 (387)
T TIGR03453 91 ALRYLPHRRGGEHLQVIAVTNFKGG--SGKTTTSAHLAQYLALR-GYRVLAIDLD 142 (387)
T ss_pred CCCCCCCCCCCCCCEEEEEECCCCC--CHHHHHHHHHHHHHHHC-CCCEEEEECC
T ss_conf 5545899999998808999788876--56999999999999977-9988999537