>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=94.85  E-value=0.015  Score=36.98  Aligned_cols=23  Identities=39%  Similarity=0.582  Sum_probs=20.3

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             99952786667337999999999
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILL  107 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL  107 (311)
T Consensus        27 ~~~i~G~nGaGKSTLl~~l~gl~   49 (157)
T cd00267          27 IVALVGPNGSGKSTLLRAIAGLL   49 (157)
T ss_pred             EEEEECCCCCCHHHHHHHHHCCC
T ss_conf             99998788999899999995884