HHsearch alignment for GI: 254780827 and conserved domain: cd01131

>cd01131 PilT Pilus retraction ATPase PilT. PilT is a nucleotide binding protein responsible for the retraction of type IV pili, likely by pili disassembly. This retraction provides the force required for travel of bacteria in low water environments by a mechanism known as twitching motility.

Probab=95.30  E-value=0.027  Score=35.29  Aligned_cols=35  Identities=29%  Similarity=0.392  Sum_probs=23.3

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCC-CCCEEEEEECC
Q ss_conf             999527866673379999999997338-98689995088
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILLQQIS-NFKVSLITTDG  122 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL~~~~-~~~V~lis~Dg  122 (311)
T Consensus         3 liLitG~TGSGKTTtl~---all~~i~~~~~~~IiTiED   38 (198)
T cd01131           3 LVLVTGPTGSGKSTTLA---AMIDYINKNKTHHILTIED   38 (198)
T ss_pred             EEEEECCCCCCHHHHHH---HHHHHHCCCCCCEEEEECC
T ss_conf             89998999997999999---9998536378836999647