HHsearch alignment for GI: 254780827 and conserved domain: cd02030
>cd02030 NDUO42 NADH:Ubiquinone oxioreductase, 42 kDa (NDUO42) is a family of proteins that are highly similar to deoxyribonucleoside kinases (dNK). Members of this family have been identified as one of the subunits of NADH:Ubiquinone oxioreductase (complex I), a multi-protein complex located in the inner mitochondrial membrane. The main function of the complex is to transport electrons from NADH to ubiquinone, which is accompanied by the translocation of protons from the mitochondrial matrix to the inter membrane space.
Probab=96.56 E-value=0.0017 Score=43.52 Aligned_cols=24 Identities=33% Similarity=0.527 Sum_probs=21.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 999527866673379999999997
Q gi|254780827|r 85 VVGITGSVAVGKSTFARILCILLQ 108 (311)
Q Consensus 85 IIGIAG~~asGKST~Ar~L~~lL~ 108 (311)
T Consensus 1 iI~IEGnIG~GKTTl~~~La~~l~ 24 (219)
T cd02030 1 VITVDGNIASGKGKLAKELAEKLG 24 (219)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 989967856799999999999859