HHsearch alignment for GI: 254780827 and conserved domain: cd03116

>cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In E. coli, the synthesis of Moco involves genes from several loci: moa, mob, mod, moe and mog. The mob locus contains mobA and mobB genes. MobB catalyzes the attachment of the guanine dinucleotide to molybdopterin.
Probab=97.56  E-value=0.00074  Score=45.93  Aligned_cols=97  Identities=24%  Similarity=0.372  Sum_probs=53.0

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             67999527866673379999999997338986899950887588268876000201898133128999999997412664
Q gi|254780827|r   83 PFVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLTANNLMQRKGFPESYDSNKLLTFLSDVKSGKK  162 (311)
Q Consensus        83 PfIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~~~~l~~rkGfPeS~D~~~L~~~L~~lK~G~~  162 (311)
T Consensus         1 mkii~ivG~snSGKTTLi~kli~~l~~~-G~~V~~iKH~~H~f~---------~D~~G-kDS~r~~~---------AGA~   60 (159)
T cd03116           1 MKVIGFVGYSGSGKTTLLEKLIPALSAR-GLRVAVIKHDHHDFD---------IDTPG-KDSYRHRE---------AGAE   60 (159)
T ss_pred             CEEEEEEECCCCCHHHHHHHHHHHHHHC-CCEEEEEEECCCCCC---------CCCCC-CHHHHHHH---------CCCC
T ss_conf             9299999679999999999999999977-985989973476777---------77898-44177675---------2973


Q ss_pred             EE--EEEC----CCCCCCCCCCC--CEEEECCCCEEEEECCHHCC
Q ss_conf             05--8740----44322565898--36998689659970610035
Q gi|254780827|r  163 KV--AVPR----YSHSQYDILEG--EYDTIIQPDILLIEGINVLQ  199 (311)
Q Consensus       163 ~V--~~Pv----Ysh~~~D~vp~--~~~vi~~pdIIIvEGi~vL~  199 (311)
T Consensus        61 ~v~v~s~~~~~l~~~~~~~~~~~~~~~~~~~~~DlvlvEG~K~~~  105 (159)
T cd03116          61 EVLVSSPRRWALIRELRDEPEPDLLLLLRLLDVDLVLVEGFKEEP  105 (159)
T ss_pred             EEEEECCCEEEEEEECCCCCCCCHHHHHHCCCCCEEEEECCCCCC
T ss_conf             799975671887774468888729999626788899983466788