HHsearch alignment for GI: 254780827 and conserved domain: cd03218
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=94.79 E-value=0.025 Score=35.53 Aligned_cols=24 Identities=29% Similarity=0.495 Sum_probs=20.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 999527866673379999999997
Q gi|254780827|r 85 VVGITGSVAVGKSTFARILCILLQ 108 (311)
Q Consensus 85 IIGIAG~~asGKST~Ar~L~~lL~ 108 (311)
T Consensus 28 i~~llGpNGAGKSTll~~i~Gl~~ 51 (232)
T cd03218 28 IVGLLGPNGAGKTTTFYMIVGLVK 51 (232)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 999999999619999999977999