HHsearch alignment for GI: 254780827 and conserved domain: cd03225

>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=95.74  E-value=0.0066  Score=39.49  Aligned_cols=73  Identities=29%  Similarity=0.318  Sum_probs=39.8

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHC-CC-----------------CCEEEEEECC--CCCCHHHHHHHCH-HHCCCCHH
Q ss_conf             99952786667337999999999733-89-----------------8689995088--7588268876000-20189813
Q gi|254780827|r   85 VVGITGSVAVGKSTFARILCILLQQI-SN-----------------FKVSLITTDG--FLFPNAVLTANNL-MQRKGFPE  143 (311)
Q Consensus        85 IIGIAG~~asGKST~Ar~L~~lL~~~-~~-----------------~~V~lis~Dg--F~~~n~~l~~~~l-~~rkGfPe  143 (311)
T Consensus        29 i~~iiG~nGaGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ig~v~Q~p~~~~~~~tv~e~i~~~~~~~~~~~  108 (211)
T cd03225          29 FVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGPTVEEEVAFGLENLGLPE  108 (211)
T ss_pred             EEEEECCCCCCHHHHHHHHHCCCCCCCCCEEECCEECCCCCHHHHHCCEEEEEECCHHHCCCCCHHHHHHHHHHHCCCCH
T ss_conf             99998899998999999996467798887789999999799899840389997783253055869999999999869999


Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             31289999999974
Q gi|254780827|r  144 SYDSNKLLTFLSDV  157 (311)
Q Consensus       144 S~D~~~L~~~L~~l  157 (311)
T Consensus       109 ~~~~~~~~~~l~~~  122 (211)
T cd03225         109 EEIEERVEEALELV  122 (211)
T ss_pred             HHHHHHHHHHHHHC
T ss_conf             99999999999986