HHsearch alignment for GI: 254780827 and conserved domain: pfam00448
>pfam00448 SRP54 SRP54-type protein, GTPase domain. This family includes relatives of the G-domain of the SRP54 family of proteins.
Probab=98.04 E-value=1.5e-05 Score=57.49 Aligned_cols=47 Identities=30% Similarity=0.362 Sum_probs=37.5
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH
Q ss_conf 6799952786667337999999999733898689995088758826887
Q gi|254780827|r 83 PFVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFLFPNAVLT 131 (311)
Q Consensus 83 PfIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~~~n~~l~ 131 (311)
T Consensus 1 P~vi~lvGptGvGKTTTiaKLAa~~~~-~~~~V~lit~Dt~-R~gA~eQ 47 (196)
T pfam00448 1 PNVILLVGLQGSGKTTTIAKLAAYLKK-QGKKVLLVAADTF-RAAAIEQ 47 (196)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHH-CCCEEEEEECCCC-CHHHHHH
T ss_conf 969999899999889999999999997-7992899975877-6889999