HHsearch alignment for GI: 254780827 and conserved domain: pfam04665
>pfam04665 Pox_A32 Poxvirus A32 protein. The A32 protein is thought to be involved in viral DNA packaging.
Probab=96.36 E-value=0.0062 Score=39.66 Aligned_cols=49 Identities=29% Similarity=0.589 Sum_probs=34.7
Q ss_pred CCCCCEEEEEECCCCCCHHHHHH-HHHHHHHHCCCCCEEEEEE------CCCCCCHHH
Q ss_conf 67876799952786667337999-9999997338986899950------887588268
Q gi|254780827|r 79 ESKIPFVVGITGSVAVGKSTFAR-ILCILLQQISNFKVSLITT------DGFLFPNAV 129 (311)
Q Consensus 79 ~~k~PfIIGIAG~~asGKST~Ar-~L~~lL~~~~~~~V~lis~------DgF~~~n~~ 129 (311)
T Consensus 9 Ll~~pFrmaivGgSGSGKT~yLlsLf~tlv~ky--khIfLfTpv~N~~Yd~YVwPdHV 64 (241)
T pfam04665 9 LLAAPFRMAIVGGSGSGKTTYLLSLLRTLVRKF--KHIFLFTPVYNNAYDGYVWPDHI 64 (241)
T ss_pred HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH--EEEEEECCCCCCCCCCCCCCCCE
T ss_conf 740873599981588756699999999997741--58999624467323652577732