HHsearch alignment for GI: 254780827 and conserved domain: smart00382
>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=96.48 E-value=0.014 Score=37.28 Aligned_cols=40 Identities=33% Similarity=0.292 Sum_probs=28.1
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 79995278666733799999999973389868999508875
Q gi|254780827|r 84 FVVGITGSVAVGKSTFARILCILLQQISNFKVSLITTDGFL 124 (311)
Q Consensus 84 fIIGIAG~~asGKST~Ar~L~~lL~~~~~~~V~lis~DgF~ 124 (311)
T Consensus 3 ~~ill~G~~GsGKTtl~~~la~~~~~~~-~~v~~~~~~~~~ 42 (148)
T smart00382 3 EVILIVGPPGSGKTTLARALARELGPPG-GGVIYIDGEDIL 42 (148)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHCCCC-CCEEEEEHHHHH
T ss_conf 7899999997029999999998726689-968998759989