HHsearch alignment for GI: 254780828 and conserved domain: COG5405
>COG5405 HslV ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Posttranslational modification, protein turnover, chaperones].
Probab=99.97 E-value=3.7e-31 Score=214.64 Aligned_cols=176 Identities=69% Similarity=1.068 Sum_probs=170.1
Q ss_pred EECCEEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf 76371799999799799981365450536774451057981597599973130588999999999999985366563067
Q gi|254780828|r 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSV 91 (190)
Q Consensus 12 ~~~GTTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~~~~~~~~~ 91 (190)
T Consensus 1 ~~h~TTiv~vr~~gkv~iagDGQVtlG~tvmK~narKvRkl~~gkvlaGFAGstADaftLfe~fe~kle~~~g~L~raav 80 (178)
T COG5405 1 TFHMTTIVAVRKNGKVVIAGDGQVTLGNTVMKGNARKVRRLYNGKVLAGFAGSTADAFTLFERFEAKLEQYQGDLFRAAV 80 (178)
T ss_pred CCEEEEEEEEEECCEEEEECCCEEEECCEEEECCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 91168999996398699952764765324340448989876078388874354016999999999999875680899999
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHH
Q ss_conf 999999761122201310451378764699805863114132799606423457889852078-9998999999999754
Q gi|254780828|r 92 ELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAA 170 (190)
Q Consensus 92 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~~-~~sa~ela~~Al~~A~ 170 (190)
T Consensus 81 elaKdwr~Dk~lr~LEAmllVad~~~~l~isG~gdV~epe~~~~aIGSGgnyAl~AarAl~~~~~lsA~eIa~~sl~iA~ 160 (178)
T COG5405 81 ELAKDWRTDKYLRKLEAMLLVADKTHILIITGNGDVIEPEDDIIAIGSGGNYALSAARALMENTELSAREIAEKSLKIAG 160 (178)
T ss_pred HHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 99875610158888662447867885899952762565788868872783389999999986369999999999986553
Q ss_pred CCCEEECCCEEEEEEEC
Q ss_conf 01102259569999941
Q gi|254780828|r 171 DICVYTNHNIVLETLKV 187 (190)
Q Consensus 171 erDvyTgd~i~i~~i~~ 187 (190)
T Consensus 161 eiciyTN~ni~ve~l~~ 177 (178)
T COG5405 161 DICIYTNHNIVVEELRL 177 (178)
T ss_pred EEEEECCCCEEEEEEEC
T ss_conf 18885399579998306