HHsearch alignment for GI: 254780828 and conserved domain: PRK05456
>PRK05456 ATP-dependent protease peptidase subunit; Provisional.
Probab=100.00 E-value=4.4e-32 Score=220.42 Aligned_cols=171 Identities=69% Similarity=1.075 Sum_probs=166.5
Q ss_pred CEEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 71799999799799981365450536774451057981597599973130588999999999999985366563067999
Q gi|254780828|r 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELA 94 (190)
Q Consensus 15 GTTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (190)
T Consensus 1 gTTIl~Vr~~g~v~iaGDGQVT~G~~V~K~~a~KVRrl~~~~Vi~GFAGstADAftLferfE~KLe~~~GnL~RaaVELA 80 (172)
T PRK05456 1 GTTILAVRRNGKVVIAGDGQVTLGNTVMKGNARKVRRLYNGKVLAGFAGSTADAFTLFERFEAKLEQHQGNLLRAAVELA 80 (172)
T ss_pred CCEEEEEEECCEEEEEECCEEEECCEEECCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 96899999899999982776531768880663267991699699983540778999999999999977306789999999
Q ss_pred HHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHCCC
Q ss_conf 99976112220131045137876469980586311413279960642345788985207-89998999999999754011
Q gi|254780828|r 95 KDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADIC 173 (190)
Q Consensus 95 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~-~~~sa~ela~~Al~~A~erD 173 (190)
T Consensus 81 K~WRtDk~LRrLEAmlivaD~~~~llisG~GDViEPddgi~aIGSGG~yA~aAArAL~~~~~l~a~~Ia~~al~IAa~iC 160 (172)
T PRK05456 81 KDWRTDRYLRRLEAMLIVADKEASLIISGNGDVIEPEDGIIAIGSGGNYALAAARALLENTDLSAEEIAEKALKIAGDIC 160 (172)
T ss_pred HHHHHHHHHHHHHHHEEEECCCCEEEEECCCCEECCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEE
T ss_conf 99854078887651347764575899925755668998768872867999999999987279999999999999886436
Q ss_pred EEECCCEEEEEE
Q ss_conf 022595699999
Q gi|254780828|r 174 VYTNHNIVLETL 185 (190)
Q Consensus 174 vyTgd~i~i~~i 185 (190)
T Consensus 161 iyTN~ni~ve~l 172 (172)
T PRK05456 161 IYTNHNITIEEL 172 (172)
T ss_pred EEECCCEEEEEC
T ss_conf 873894899849