HHsearch alignment for GI: 254780828 and conserved domain: PRK05456

>PRK05456 ATP-dependent protease peptidase subunit; Provisional.
Probab=100.00  E-value=4.4e-32  Score=220.42  Aligned_cols=171  Identities=69%  Similarity=1.075  Sum_probs=166.5

Q ss_pred             CEEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf             71799999799799981365450536774451057981597599973130588999999999999985366563067999
Q gi|254780828|r   15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELA   94 (190)
Q Consensus        15 GTTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (190)
T Consensus         1 gTTIl~Vr~~g~v~iaGDGQVT~G~~V~K~~a~KVRrl~~~~Vi~GFAGstADAftLferfE~KLe~~~GnL~RaaVELA   80 (172)
T PRK05456          1 GTTILAVRRNGKVVIAGDGQVTLGNTVMKGNARKVRRLYNGKVLAGFAGSTADAFTLFERFEAKLEQHQGNLLRAAVELA   80 (172)
T ss_pred             CCEEEEEEECCEEEEEECCEEEECCEEECCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf             96899999899999982776531768880663267991699699983540778999999999999977306789999999


Q ss_pred             HHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHCCC
Q ss_conf             99976112220131045137876469980586311413279960642345788985207-89998999999999754011
Q gi|254780828|r   95 KDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADIC  173 (190)
Q Consensus        95 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~-~~~sa~ela~~Al~~A~erD  173 (190)
T Consensus        81 K~WRtDk~LRrLEAmlivaD~~~~llisG~GDViEPddgi~aIGSGG~yA~aAArAL~~~~~l~a~~Ia~~al~IAa~iC  160 (172)
T PRK05456         81 KDWRTDRYLRRLEAMLIVADKEASLIISGNGDVIEPEDGIIAIGSGGNYALAAARALLENTDLSAEEIAEKALKIAGDIC  160 (172)
T ss_pred             HHHHHHHHHHHHHHHEEEECCCCEEEEECCCCEECCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEE
T ss_conf             99854078887651347764575899925755668998768872867999999999987279999999999999886436


Q ss_pred             EEECCCEEEEEE
Q ss_conf             022595699999
Q gi|254780828|r  174 VYTNHNIVLETL  185 (190)
Q Consensus       174 vyTgd~i~i~~i  185 (190)
T Consensus       161 iyTN~ni~ve~l  172 (172)
T PRK05456        161 IYTNHNITIEEL  172 (172)
T ss_pred             EEECCCEEEEEC
T ss_conf             873894899849