HHsearch results for GI: 254780828 and protein with PDBid: 1iru_K
>1iru_K 20S proteasome; cell cycle, immune response, proteolysis, ubiquitin, hydrolase; 2.75A {Bos taurus} SCOP: d.153.1.4
Probab=99.97 E-value=4.9e-30 Score=206.26 Aligned_cols=173 Identities=14% Similarity=0.095 Sum_probs=144.4
Q ss_pred CEEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC--CCCCCHHH
Q ss_conf 7179999979979998136545053677445105798159759997313058899999999999998536--65630679
Q gi|254780828|r 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPN--QLLRSSVE 92 (190)
Q Consensus 15 GTTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~~--~~~~~~~~ 92 (190)
-||+|||+++||||||||+|+|+|+++.+++.+|||+++++++++ .+|..+|++.+.+.++.++++++. .....+..
T Consensus 1 Mt~vvgi~~~dgVviaaDtr~~~g~~~~~~~~~KI~~i~~~i~~~-~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~ 79 (201)
T 1iru_K 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLL-CVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTA 79 (201)
T ss_dssp CCCEEEEECSSEEEEEEECCEEETTEEEESSCCCEEECSSSEEEE-EEESTTHHHHHHHHHHHHHHHHHHHHSSCCCHHH
T ss_pred CEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEE-ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 909999998999999987875679731168755199946968999-7146488999999998776666663088676899
Q ss_pred HHHHHHHHHHHH-----HCCC--EEEECC-CCCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHCCCCCH---HHH
Q ss_conf 999997611222-----0131--045137-87646998058631141327996064234578898520789998---999
Q gi|254780828|r 93 LAKDWRMDKYLR-----NLEA--MILIAD-KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA---EEI 161 (190)
Q Consensus 93 ~~~~~~~~~y~~-----~~~~--~~~~~~-~~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~~~~sa---~el 161 (190)
.++.+....|.. ++.. .+.+.+ ..+|.++..|+.|...+.+|+|+|||+.+|+++|++.|+++|+. .++
T Consensus 80 ~~~~~~~~~~~~~~~~~p~~~~~liaG~d~~~~~~l~~~d~~G~~~~~~~~a~Gsg~~~~~~~L~~~~~~~~~~~ea~~l 159 (201)
T 1iru_K 80 AANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVEL 159 (201)
T ss_dssp HHHHHHHHHHHHHTSSSCCCEEEEEEEEETTTEEEEEEECTTCCEEECSEEEESHHHHHHHHHHHHHCCTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEECCCEEEEECCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 99999999999986468850454461162589827999749853886683466055488999998651489599999999
Q ss_pred HHHHHHHHHCCCEEECCCEEEEEEECC
Q ss_conf 999999754011022595699999417
Q gi|254780828|r 162 ARKAMSIAADICVYTNHNIVLETLKVG 188 (190)
Q Consensus 162 a~~Al~~A~erDvyTgd~i~i~~i~~~ 188 (190)
+++||..|.+||++||++++|.+|+.+
T Consensus 160 ~~~~l~~~~~rd~~~g~~~~v~vv~~~ 186 (201)
T 1iru_K 160 LRKCLEELQKRFILNLPTFSVRIIDKN 186 (201)
T ss_dssp HHHHHHHHHHTBCBCCCCEEEEEEETT
T ss_pred HHHHHHHHHHHCCCCCCCEEEEEECCC
T ss_conf 999999999864877991599999389