HHsearch results for GI: 254780828 and protein with PDBid: 1iru_L
>1iru_L 20S proteasome; cell cycle, immune response, proteolysis, ubiquitin, hydrolase; 2.75A {Bos taurus} SCOP: d.153.1.4
Probab=100.00 E-value=2.3e-32 Score=220.80 Aligned_cols=172 Identities=21% Similarity=0.158 Sum_probs=150.2
Q ss_pred EEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHC--CCCCCCHHHH
Q ss_conf 17999997997999813654505367744510579815975999731305889999999999999853--6656306799
Q gi|254780828|r 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP--NQLLRSSVEL 93 (190)
Q Consensus 16 TTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~--~~~~~~~~~~ 93 (190)
||+|||+++||||||||+|+|+|+++.+++++||++++|+++++ ++|.++|.+.+.+.++.++++++ .....++..+
T Consensus 1 TT~iai~~~dgVvlaaD~r~t~g~~i~~~~~~KI~~i~d~i~~~-~sG~~~D~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 79 (204)
T 1iru_L 1 TTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGT-MAGGAADCSFWERLLARQCRIYELRNKERISVAAA 79 (204)
T ss_dssp CCEEEEEETTEEEEEECCCEEETTEEEESCCCCEEEEETTEEEE-CCBCHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHH
T ss_pred CEEEEEEECCEEEEEECCCCCCCCEEECCCCCCEEEECCCEEEE-EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 95999998999999988864648777558755289978975899-84471678999999999999877630789867899
Q ss_pred HHHHHHHHHHHHCCC-----EEEECCCCCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHCCCCCHH---HHHHHH
Q ss_conf 999976112220131-----045137876469980586311413279960642345788985207899989---999999
Q gi|254780828|r 94 AKDWRMDKYLRNLEA-----MILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKA 165 (190)
Q Consensus 94 ~~~~~~~~y~~~~~~-----~~~~~~~~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~~~~sa~---ela~~A 165 (190)
++.+....|.++..| .+.+.|..+|.++..|+.|...+.+++|+|||+++|+++|++.|+++|+.+ +++++|
T Consensus 80 ~~~l~~~~~~~~~~p~~~~~i~~G~d~~g~~l~~~d~~G~~~~~~~~a~G~g~~~a~~~Le~~~~~~ms~~ea~~l~~~a 159 (204)
T 1iru_L 80 SKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRA 159 (204)
T ss_dssp HHHHHHHHHTTTTSCCCBEEEEEEECSSSEEEEEEESSSCEEECSEEEESTTHHHHHHHHHTTCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCCCEEEECCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 99999999972799852789999995488679999278328984357726885899999985545998999999999999
Q ss_pred HHHHHCCCEEECCCEEEEEEECC
Q ss_conf 99754011022595699999417
Q gi|254780828|r 166 MSIAADICVYTNHNIVLETLKVG 188 (190)
Q Consensus 166 l~~A~erDvyTgd~i~i~~i~~~ 188 (190)
|+.|.+||..+|+++++.+|+.+
T Consensus 160 l~~~~~~d~~sg~~i~v~~i~~~ 182 (204)
T 1iru_L 160 IYQATYRDAYSGGAVNLYHVRED 182 (204)
T ss_dssp HHHHHHHBTTCCSEEEEEEECSS
T ss_pred HHHHHHHCCCCCCCEEEEEEECC
T ss_conf 99999727778996699999489