HHsearch results for GI: 254780828 and protein with PDBid: 1q5r_H
>1q5r_H Proteasome beta-type subunit 1; proteasome assembly, Pro-peptide, inter-subunit contacts, hydrolase; 3.10A {Rhodococcus erythropolis} SCOP: d.153.1.4 PDB: 2h6j_H
Probab=100.00 E-value=8.3e-34 Score=229.85 Aligned_cols=175 Identities=21% Similarity=0.167 Sum_probs=140.9
Q ss_pred ECCEEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC--CCH
Q ss_conf 637179999979979998136545053677445105798159759997313058899999999999998536656--306
Q gi|254780828|r 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL--RSS 90 (190)
Q Consensus 13 ~~GTTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~~~~~--~~~ 90 (190)
.||||||||+|+||||||+|+|+|+|++|.+++++||++++++++++ ++|.++|++.+.+.++.++++++.... .++
T Consensus 63 ~hGTTiVai~~~dGVviAaD~r~t~g~~i~~~~~~KI~~i~d~i~i~-~aG~~aD~~~l~~~l~~e~~~y~~~~g~~~s~ 141 (294)
T 1q5r_H 63 PHGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEAVYVTDEYSAAG-IAGTAGIAIELVRLFAVELEHYEKIEGVPLTF 141 (294)
T ss_dssp CBCCCEEEEECSSCEEEEECCCEEETTEEEESCCCCEEEEETTEEEE-EEEBHHHHHHHHHHHHHHHHHHHHHHSSCCCH
T ss_pred CCCCEEEEEEECCEEEEEECCCCCCCCEEECCCCCEEEEECCCEEEE-EEECHHHHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 98554999998999999988865678765358765399968988999-85568999999999999888888760998668
Q ss_pred HHHHHHHHHHHHH------HHCC--CEEEECC------CCCCEEEEECCCCCEE--CCCEEEEECCHHHHHHHHHHHHCC
Q ss_conf 7999999761122------2013--1045137------8764699805863114--132799606423457889852078
Q gi|254780828|r 91 VELAKDWRMDKYL------RNLE--AMILIAD------KTITLVITGMGDVLEP--ENGVMAIGSGGSYALSAARALMST 154 (190)
Q Consensus 91 ~~~~~~~~~~~y~------~~~~--~~~~~~~------~~~~~~~~~d~~g~~~--~~~~~a~GSGs~~A~g~Le~~y~~ 154 (190)
...++.+....+. +++. +.+.+.| ..++.+|.+|+.|+.. ..+|+|+|||+.+|+++||+.|++
T Consensus 142 ~~~a~~la~~l~~~~~~~~~~~~v~~l~aG~d~~g~d~~~~g~L~~~D~~G~~~~~~~~~~AiGsGs~~A~~~Lek~~~~ 221 (294)
T 1q5r_H 142 DGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSP 221 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTCEEEEEEEECTTCSCTTSCEEEEEECSSSCEEECCSSEEEESTTHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCEECEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCEEEEECCHHHHHHHHHHHCCC
T ss_conf 89999999999752343567744011067884247767788659999547987886257689847899999999875326
Q ss_pred CCCHHH---HHHHHHHHHHCCCEEECCC-------EEEEEEECC
Q ss_conf 999899---9999999754011022595-------699999417
Q gi|254780828|r 155 QNSAEE---IARKAMSIAADICVYTNHN-------IVLETLKVG 188 (190)
Q Consensus 155 ~~sa~e---la~~Al~~A~erDvyTgd~-------i~i~~i~~~ 188 (190)
+|+.+| ++++||..|+++|.+||+. +.+.+|+-+
T Consensus 222 ~ms~eeA~~la~~AL~~a~~~D~~sGG~d~~~~~~~~v~~i~~~ 265 (294)
T 1q5r_H 222 DSDEETALRAAIESLYDAADDDSATGGPDLTRGIYPTAVTITQA 265 (294)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHCTTTCCCBTTTTBCCEEEEEETT
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECC
T ss_conf 99999999999999999996244568854345550489999589