HHsearch results for GI: 254780828 and protein with PDBid: 1ryp_K
>1ryp_K 20S proteasome; multicatalytic proteinase, protein degradation, antigen processing, hydrolase, protease; 1.90A {Saccharomyces cerevisiae} SCOP: d.153.1.4 PDB: 1fnt_K 1g0u_J* 1jd2_J* 1g65_J 1vsy_K 1z7q_K 2f16_J* 2fak_J* 2fny_J* 2gpl_J* 2zcy_J* 3bdm_J* 3d29_J* 3dy3_J* 3dy4_J* 3e47_J* 3gpj_J* 3gpt_J* 3gpw_J* 3hye_J* ...
Probab=99.97 E-value=1.9e-29 Score=202.62 Aligned_cols=173 Identities=17% Similarity=0.186 Sum_probs=144.2
Q ss_pred CEEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHC--CCCCCCHHH
Q ss_conf 717999997997999813654505367744510579815975999731305889999999999999853--665630679
Q gi|254780828|r 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP--NQLLRSSVE 92 (190)
Q Consensus 15 GTTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~--~~~~~~~~~ 92 (190)
-||+|||+++|||+||||+|+|.|.++.+++.+|||+|+++++++ ++|.++|.+.+.+.++.++.+++ .....++..
T Consensus 1 M~Tivgi~~~dgVviaaD~r~~~g~~~~~~~~~Ki~~I~~~i~~~-~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~ 79 (198)
T 1ryp_K 1 MDIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMS-FAGEAGDTVQFAEYIQANIQLYSIREDYELSPQA 79 (198)
T ss_dssp CCCEEEEECSSCEEEEEECCEEETTEEEESCCCCEEEEETTEEEE-EEESHHHHHHHHHHHHHHHHHHHHHHTSCCCHHH
T ss_pred CEEEEEEEECCEEEEEECCCCCCCCEEECCCCCEEEEECCCEEEE-ECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 919999998999999997886669776447734499916978999-7677626899999999998888987299998889
Q ss_pred HHHHHHHHHHH-----HHCCCEE--EECC--CCCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHCCCCCHH---H
Q ss_conf 99999761122-----2013104--5137--876469980586311413279960642345788985207899989---9
Q gi|254780828|r 93 LAKDWRMDKYL-----RNLEAMI--LIAD--KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---E 160 (190)
Q Consensus 93 ~~~~~~~~~y~-----~~~~~~~--~~~~--~~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~~~~sa~---e 160 (190)
+++..+...|. +++...+ .+.| .++|++|..|+.|...+.+|.|+|+|+.+|+++|++.|+++|+.+ +
T Consensus 80 ~~~~~~~~~~~~~~~~rP~~~~~ivaG~D~~~~~p~L~~id~~G~~~~~~~~a~G~g~~~~~~~Le~~~~~~m~~~ea~~ 159 (198)
T 1ryp_K 80 VSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLD 159 (198)
T ss_dssp HHHHHHHHHHHHTTSSSCCCEEEEEEEEETTTTEEEEEEECTTCCEEECSEEECTTHHHHHHHHHHHHCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCEEEEECCCCCEEECCEEEEEECCCCHHHHHHHHCCCCCCHHHHHH
T ss_conf 99999999988765578731688898871678975798755986478647589973661026899965669979999999
Q ss_pred HHHHHHHHHHCCCEEECCCEEEEEEECC
Q ss_conf 9999999754011022595699999417
Q gi|254780828|r 161 IARKAMSIAADICVYTNHNIVLETLKVG 188 (190)
Q Consensus 161 la~~Al~~A~erDvyTgd~i~i~~i~~~ 188 (190)
++++||.++.+||.+++++++|.+|+.+
T Consensus 160 l~~~al~~~~~~d~~s~~~~~v~ii~k~ 187 (198)
T 1ryp_K 160 LLKLCVQELEKRMPMDFKGVIVKIVDKD 187 (198)
T ss_dssp HHHHHHHHHHHHCSBCCCCEEEEEEETT
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEEECCC
T ss_conf 9999999998646767995799999289