HHsearch results for GI: 254780828 and protein with PDBid: 1ryp_L
>1ryp_L 20S proteasome; multicatalytic proteinase, protein degradation, antigen processing, hydrolase, protease; 1.90A {Saccharomyces cerevisiae} SCOP: d.153.1.4 PDB: 1fnt_L 1vsy_L 1z7q_L 3l5q_P 1g0u_K 1jd2_K* 2f16_K* 2fak_K* 2fny_K* 2gpl_K* 2zcy_K* 3bdm_K* 3d29_K* 3dy3_K* 3dy4_K* 3e47_K* 3gpj_K* 3gpt_K* 3gpw_K* 3hye_K* ...
Probab=100.00 E-value=9.2e-32 Score=217.07 Aligned_cols=172 Identities=19% Similarity=0.143 Sum_probs=147.7
Q ss_pred EEEEEEEECCEEEEEECCCCCCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHC--CCCCCCHHHH
Q ss_conf 17999997997999813654505367744510579815975999731305889999999999999853--6656306799
Q gi|254780828|r 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP--NQLLRSSVEL 93 (190)
Q Consensus 16 TTivgi~~~dgVviAaDtR~S~G~~v~sr~~~KI~~i~d~~~~~g~ag~a~d~~~~~~~~~~~~~~~~--~~~~~~~~~~ 93 (190)
||+|||+++||||||+|+|+|.|+++.+++.+||++++++++++ ++|.++|.+.+.+.++.++.+++ .....++..+
T Consensus 1 TT~iai~~~dgVvlaaD~r~t~g~~i~~~~~~KI~~i~~~i~~~-~sG~~~D~~~l~~~~~~~~~~~~~~~~~~~~v~~l 79 (212)
T 1ryp_L 1 TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKRVIEINPFLLGT-MAGGAADCQFWETWLGSQCRLHELREKERISVAAA 79 (212)
T ss_dssp CCEEEEEETTEEEEEECCCEEETTEEEESCCCCEEEEETTEEEE-CCBCHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHH
T ss_pred CEEEEEEECCEEEEEECCCCCCCCEEECCCCCEEEEECCCEEEE-EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 93999998999999985875658676358754189967957999-74271768999999999988888750898878999
Q ss_pred HHHHHHHHHHHHCCC-----EEEEC-CCCCCEEEEECCCCCEECCCEEEEECCHHHHHHHHHHHHCCCCCHH---HHHHH
Q ss_conf 999976112220131-----04513-7876469980586311413279960642345788985207899989---99999
Q gi|254780828|r 94 AKDWRMDKYLRNLEA-----MILIA-DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARK 164 (190)
Q Consensus 94 ~~~~~~~~y~~~~~~-----~~~~~-~~~~~~~~~~d~~g~~~~~~~~a~GSGs~~A~g~Le~~y~~~~sa~---ela~~ 164 (190)
++.+....|.++..+ .+++. +..+|++|..|+.|+..+.+++|+|+|+.+|+++||+.|+++|+.+ +++++
T Consensus 80 a~~l~~~~~~~~~~p~~~~~li~G~~~~~gp~Ly~~d~~G~~~~~~~~a~G~g~~~~~~~Le~~~~~~ms~eea~~l~~~ 159 (212)
T 1ryp_L 80 SKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKR 159 (212)
T ss_dssp HHHHHHHHHHTTTSCCCBEEEEEEEETTTEEEEEEEETTCCEEECSEEEESTTHHHHHHHHHHHCCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEECCCEEEEECCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 99999999985379861688998996189528999859868997671798885288999999874369998999999999
Q ss_pred HHHHHHCCCEEECCCEEEEEEECC
Q ss_conf 999754011022595699999417
Q gi|254780828|r 165 AMSIAADICVYTNHNIVLETLKVG 188 (190)
Q Consensus 165 Al~~A~erDvyTgd~i~i~~i~~~ 188 (190)
||..|.+||.++|++++|.+|+-+
T Consensus 160 al~~~~~rd~~sg~~v~v~vvtkd 183 (212)
T 1ryp_L 160 SILAAAHRDAYSGGSVNLYHVTED 183 (212)
T ss_dssp HHHHHHHHBTTCCSEEEEEEEETT
T ss_pred HHHHHHHHCCCCCCCEEEEEECCC
T ss_conf 999999746878996599999389