BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780828|ref|YP_003065241.1| ATP-dependent protease
peptidase subunit [Candidatus Liberibacter asiaticus str. psy62]
(190 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780828|ref|YP_003065241.1| ATP-dependent protease peptidase subunit [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040505|gb|ACT57301.1| ATP-dependent protease peptidase subunit [Candidatus Liberibacter
asiaticus str. psy62]
Length = 190
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/190 (100%), Positives = 190/190 (100%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG
Sbjct: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV
Sbjct: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI
Sbjct: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
Query: 181 VLETLKVGDE 190
VLETLKVGDE
Sbjct: 181 VLETLKVGDE 190
>gi|315122052|ref|YP_004062541.1| ATP-dependent protease peptidase subunit [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495454|gb|ADR52053.1| ATP-dependent protease peptidase subunit [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 189
Score = 318 bits (816), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 154/177 (87%), Positives = 167/177 (94%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
VKMHATTILTVRK G+VVIA DGQVS+G TVMK NARKVRRLGKGNIIAGFAGSSADAFT
Sbjct: 11 VKMHATTILTVRKGGIVVIASDGQVSVGNTVMKGNARKVRRLGKGNIIAGFAGSSADAFT 70
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L+E+LEKKLEQYP QLLR+SVEL KDWR DKYLRNLEAMIL+ADKT+TLVITG GDVLEP
Sbjct: 71 LVEKLEKKLEQYPGQLLRASVELTKDWRADKYLRNLEAMILVADKTVTLVITGAGDVLEP 130
Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
E+GVMAIGSGGSYAL+AARALM+TQ SAEEIAR+AMSIAADICVYTNH I+LETL+V
Sbjct: 131 EHGVMAIGSGGSYALAAARALMNTQKSAEEIAREAMSIAADICVYTNHEIILETLEV 187
>gi|110635820|ref|YP_676028.1| ATP-dependent protease peptidase subunit [Mesorhizobium sp. BNC1]
gi|123353080|sp|Q11CL2|HSLV_MESSB RecName: Full=ATP-dependent protease subunit HslV
gi|110286804|gb|ABG64863.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Chelativorans sp. BNC1]
Length = 182
Score = 294 bits (752), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 140/176 (79%), Positives = 158/176 (89%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MH TTI+TVRK G VVIAGDGQVSLGQTVMK NARKVRR+GKGN+IAGFAG++ADAFTLL
Sbjct: 7 MHGTTIVTVRKGGKVVIAGDGQVSLGQTVMKGNARKVRRIGKGNVIAGFAGATADAFTLL 66
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLEKKLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+ADK +TL +TG GDVLEPE
Sbjct: 67 ERLEKKLEQYPDQLMRASVELAKDWRTDRYLRRLEAMMLVADKNVTLALTGTGDVLEPEE 126
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM IAA ICVYTN NI++ETL G
Sbjct: 127 GVMAIGSGGNYALAAARALIDTDKSAEEIARKAMEIAASICVYTNSNIIVETLDAG 182
>gi|306842804|ref|ZP_07475444.1| ATP-dependent protease peptidase subunit [Brucella sp. BO2]
gi|306286998|gb|EFM58509.1| ATP-dependent protease peptidase subunit [Brucella sp. BO2]
Length = 211
Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 136/179 (75%), Positives = 160/179 (89%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 30 EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 89
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 90 DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 149
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM+IAADIC+YTNHNI++E+L
Sbjct: 150 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESL 208
>gi|225626460|ref|ZP_03784499.1| ATP-dependent protease hslV [Brucella ceti str. Cudo]
gi|254718123|ref|ZP_05179934.1| ATP-dependent protease peptidase subunit [Brucella sp. 83/13]
gi|256158579|ref|ZP_05456469.1| ATP-dependent protease peptidase subunit [Brucella ceti M490/95/1]
gi|256253990|ref|ZP_05459526.1| ATP-dependent protease peptidase subunit [Brucella ceti B1/94]
gi|260169489|ref|ZP_05756300.1| ATP-dependent protease peptidase subunit [Brucella sp. F5/99]
gi|261221130|ref|ZP_05935411.1| ATP-dependent protease hslV [Brucella ceti B1/94]
gi|261759014|ref|ZP_06002723.1| pyridine nucleotide-disulphide oxidoreductase [Brucella sp. F5/99]
gi|265983075|ref|ZP_06095810.1| ATP-dependent protease hslV [Brucella sp. 83/13]
gi|265997090|ref|ZP_06109647.1| ATP-dependent protease hslV [Brucella ceti M490/95/1]
gi|306839750|ref|ZP_07472552.1| ATP-dependent protease peptidase subunit [Brucella sp. NF 2653]
gi|225618117|gb|EEH15160.1| ATP-dependent protease hslV [Brucella ceti str. Cudo]
gi|260919714|gb|EEX86367.1| ATP-dependent protease hslV [Brucella ceti B1/94]
gi|261738998|gb|EEY26994.1| pyridine nucleotide-disulphide oxidoreductase [Brucella sp. F5/99]
gi|262551558|gb|EEZ07548.1| ATP-dependent protease hslV [Brucella ceti M490/95/1]
gi|264661667|gb|EEZ31928.1| ATP-dependent protease hslV [Brucella sp. 83/13]
gi|306405210|gb|EFM61487.1| ATP-dependent protease peptidase subunit [Brucella sp. NF 2653]
Length = 184
Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 136/179 (75%), Positives = 160/179 (89%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRTSVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM+IAADIC+YTNHNI++E+L
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESL 181
>gi|62290924|ref|YP_222717.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 1
str. 9-941]
gi|82700835|ref|YP_415409.1| ATP-dependent protease peptidase subunit [Brucella melitensis
biovar Abortus 2308]
gi|189025137|ref|YP_001935905.1| ATP-dependent protease peptidase subunit [Brucella abortus S19]
gi|237816431|ref|ZP_04595424.1| ATP-dependent protease hslV [Brucella abortus str. 2308 A]
gi|254696330|ref|ZP_05158158.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 2
str. 86/8/59]
gi|254731246|ref|ZP_05189824.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 4
str. 292]
gi|260546186|ref|ZP_05821926.1| pyridine nucleotide-disulphide oxidoreductase [Brucella abortus
NCTC 8038]
gi|260758977|ref|ZP_05871325.1| ATP-dependent protease hslV [Brucella abortus bv. 4 str. 292]
gi|260760701|ref|ZP_05873044.1| ATP-dependent protease hslV [Brucella abortus bv. 2 str. 86/8/59]
gi|75496073|sp|Q57AH8|HSLV_BRUAB RecName: Full=ATP-dependent protease subunit HslV
gi|123547310|sp|Q2YQZ3|HSLV_BRUA2 RecName: Full=ATP-dependent protease subunit HslV
gi|238065812|sp|B2S979|HSLV_BRUA1 RecName: Full=ATP-dependent protease subunit HslV
gi|62197056|gb|AAX75356.1| HslV, heat shock protein [Brucella abortus bv. 1 str. 9-941]
gi|82616936|emb|CAJ12037.1| Pyridine nucleotide-disulphide oxidoreductase,
class-II:Multispecific proteasome protease [Brucella
melitensis biovar Abortus 2308]
gi|189020709|gb|ACD73431.1| Pyridine nucleotide-disulphide oxidoreductase, class-II [Brucella
abortus S19]
gi|237788498|gb|EEP62713.1| ATP-dependent protease hslV [Brucella abortus str. 2308 A]
gi|260096293|gb|EEW80169.1| pyridine nucleotide-disulphide oxidoreductase [Brucella abortus
NCTC 8038]
gi|260669295|gb|EEX56235.1| ATP-dependent protease hslV [Brucella abortus bv. 4 str. 292]
gi|260671133|gb|EEX57954.1| ATP-dependent protease hslV [Brucella abortus bv. 2 str. 86/8/59]
Length = 184
Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 136/179 (75%), Positives = 160/179 (89%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGTTA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM+IAADIC+YTNHNI++E+L
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESL 181
>gi|23502928|ref|NP_699055.1| ATP-dependent protease peptidase subunit [Brucella suis 1330]
gi|161619993|ref|YP_001593880.1| ATP-dependent protease peptidase subunit [Brucella canis ATCC
23365]
gi|163844098|ref|YP_001628502.1| ATP-dependent protease peptidase subunit [Brucella suis ATCC 23445]
gi|225853511|ref|YP_002733744.1| ATP-dependent protease peptidase subunit [Brucella melitensis ATCC
23457]
gi|254690213|ref|ZP_05153467.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 6
str. 870]
gi|254694703|ref|ZP_05156531.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 3
str. Tulya]
gi|254700712|ref|ZP_05162540.1| ATP-dependent protease peptidase subunit [Brucella suis bv. 5 str.
513]
gi|254705084|ref|ZP_05166912.1| ATP-dependent protease peptidase subunit [Brucella suis bv. 3 str.
686]
gi|254707399|ref|ZP_05169227.1| ATP-dependent protease peptidase subunit [Brucella pinnipedialis
M163/99/10]
gi|254709058|ref|ZP_05170869.1| ATP-dependent protease peptidase subunit [Brucella pinnipedialis
B2/94]
gi|256030583|ref|ZP_05444197.1| ATP-dependent protease peptidase subunit [Brucella pinnipedialis
M292/94/1]
gi|256045684|ref|ZP_05448562.1| ATP-dependent protease peptidase subunit [Brucella melitensis bv. 1
str. Rev.1]
gi|256060045|ref|ZP_05450227.1| ATP-dependent protease peptidase subunit [Brucella neotomae 5K33]
gi|256112405|ref|ZP_05453326.1| ATP-dependent protease peptidase subunit [Brucella melitensis bv. 3
str. Ether]
gi|256258468|ref|ZP_05464004.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 9
str. C68]
gi|256263007|ref|ZP_05465539.1| pyridine nucleotide-disulphide oxidoreductase [Brucella melitensis
bv. 2 str. 63/9]
gi|256370478|ref|YP_003107989.1| ATP-dependent protease peptidase subunit [Brucella microti CCM
4915]
gi|260567449|ref|ZP_05837919.1| pyridine nucleotide-disulphide oxidoreductase [Brucella suis bv. 4
str. 40]
gi|260755753|ref|ZP_05868101.1| ATP-dependent protease hslV [Brucella abortus bv. 6 str. 870]
gi|260884779|ref|ZP_05896393.1| ATP-dependent protease hslV [Brucella abortus bv. 9 str. C68]
gi|261215030|ref|ZP_05929311.1| ATP-dependent protease hslV [Brucella abortus bv. 3 str. Tulya]
gi|261314886|ref|ZP_05954083.1| ATP-dependent protease hslV [Brucella pinnipedialis M163/99/10]
gi|261316556|ref|ZP_05955753.1| ATP-dependent protease hslV [Brucella pinnipedialis B2/94]
gi|261324021|ref|ZP_05963218.1| ATP-dependent protease hslV [Brucella neotomae 5K33]
gi|261751221|ref|ZP_05994930.1| heat shock protein hslV [Brucella suis bv. 5 str. 513]
gi|261755786|ref|ZP_05999495.1| ATP-dependent protease hslV [Brucella suis bv. 3 str. 686]
gi|265987630|ref|ZP_06100187.1| ATP-dependent protease hslV [Brucella pinnipedialis M292/94/1]
gi|265992105|ref|ZP_06104662.1| ATP-dependent protease hslV [Brucella melitensis bv. 1 str. Rev.1]
gi|265993842|ref|ZP_06106399.1| ATP-dependent protease hslV [Brucella melitensis bv. 3 str. Ether]
gi|294851309|ref|ZP_06791982.1| ATP-dependent protease hslV [Brucella sp. NVSL 07-0026]
gi|297247308|ref|ZP_06931026.1| ATP-dependent protease hslV [Brucella abortus bv. 5 str. B3196]
gi|306843499|ref|ZP_07476100.1| ATP-dependent protease peptidase subunit [Brucella sp. BO1]
gi|38258147|sp|Q8FY11|HSLV_BRUSU RecName: Full=ATP-dependent protease subunit HslV
gi|189043930|sp|A9M9R4|HSLV_BRUC2 RecName: Full=ATP-dependent protease subunit HslV
gi|189043931|sp|B0CJI0|HSLV_BRUSI RecName: Full=ATP-dependent protease subunit HslV
gi|254802407|sp|C0RFW8|HSLV_BRUMB RecName: Full=ATP-dependent protease subunit HslV
gi|23348961|gb|AAN30970.1| heat shock protein HslV [Brucella suis 1330]
gi|161336804|gb|ABX63109.1| ATP-dependent protease hslV [Brucella canis ATCC 23365]
gi|163674821|gb|ABY38932.1| ATP-dependent protease hslV [Brucella suis ATCC 23445]
gi|225641876|gb|ACO01790.1| ATP-dependent protease hslV [Brucella melitensis ATCC 23457]
gi|256000641|gb|ACU49040.1| ATP-dependent protease peptidase subunit [Brucella microti CCM
4915]
gi|260156967|gb|EEW92047.1| pyridine nucleotide-disulphide oxidoreductase [Brucella suis bv. 4
str. 40]
gi|260675861|gb|EEX62682.1| ATP-dependent protease hslV [Brucella abortus bv. 6 str. 870]
gi|260874307|gb|EEX81376.1| ATP-dependent protease hslV [Brucella abortus bv. 9 str. C68]
gi|260916637|gb|EEX83498.1| ATP-dependent protease hslV [Brucella abortus bv. 3 str. Tulya]
gi|261295779|gb|EEX99275.1| ATP-dependent protease hslV [Brucella pinnipedialis B2/94]
gi|261300001|gb|EEY03498.1| ATP-dependent protease hslV [Brucella neotomae 5K33]
gi|261303912|gb|EEY07409.1| ATP-dependent protease hslV [Brucella pinnipedialis M163/99/10]
gi|261740974|gb|EEY28900.1| heat shock protein hslV [Brucella suis bv. 5 str. 513]
gi|261745539|gb|EEY33465.1| ATP-dependent protease hslV [Brucella suis bv. 3 str. 686]
gi|262764823|gb|EEZ10744.1| ATP-dependent protease hslV [Brucella melitensis bv. 3 str. Ether]
gi|263003171|gb|EEZ15464.1| ATP-dependent protease hslV [Brucella melitensis bv. 1 str. Rev.1]
gi|263092880|gb|EEZ17055.1| pyridine nucleotide-disulphide oxidoreductase [Brucella melitensis
bv. 2 str. 63/9]
gi|264659827|gb|EEZ30088.1| ATP-dependent protease hslV [Brucella pinnipedialis M292/94/1]
gi|294819898|gb|EFG36897.1| ATP-dependent protease hslV [Brucella sp. NVSL 07-0026]
gi|297174477|gb|EFH33824.1| ATP-dependent protease hslV [Brucella abortus bv. 5 str. B3196]
gi|306276190|gb|EFM57890.1| ATP-dependent protease peptidase subunit [Brucella sp. BO1]
gi|326410078|gb|ADZ67143.1| ATP-dependent protease peptidase subunit [Brucella melitensis M28]
gi|326539794|gb|ADZ88009.1| ATP-dependent protease hslV [Brucella melitensis M5-90]
Length = 184
Score = 291 bits (746), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 136/179 (75%), Positives = 160/179 (89%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM+IAADIC+YTNHNI++E+L
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESL 181
>gi|254713515|ref|ZP_05175326.1| ATP-dependent protease peptidase subunit [Brucella ceti M644/93/1]
gi|254716129|ref|ZP_05177940.1| ATP-dependent protease peptidase subunit [Brucella ceti M13/05/1]
gi|261217899|ref|ZP_05932180.1| ATP-dependent protease hslV [Brucella ceti M13/05/1]
gi|261321251|ref|ZP_05960448.1| ATP-dependent protease hslV [Brucella ceti M644/93/1]
gi|260922988|gb|EEX89556.1| ATP-dependent protease hslV [Brucella ceti M13/05/1]
gi|261293941|gb|EEX97437.1| ATP-dependent protease hslV [Brucella ceti M644/93/1]
Length = 184
Score = 290 bits (743), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 136/179 (75%), Positives = 159/179 (88%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R SVELAKDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRVSVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM+IAADIC+YTNHNI++E+L
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESL 181
>gi|17988330|ref|NP_540964.1| ATP-dependent protease peptidase subunit [Brucella melitensis bv. 1
str. 16M]
gi|260562985|ref|ZP_05833471.1| heat shock protein hslV [Brucella melitensis bv. 1 str. 16M]
gi|21759172|sp|Q8YE31|HSLV_BRUME RecName: Full=ATP-dependent protease subunit HslV
gi|17984105|gb|AAL53228.1| heat shock protein hslv [Brucella melitensis bv. 1 str. 16M]
gi|260153001|gb|EEW88093.1| heat shock protein hslV [Brucella melitensis bv. 1 str. 16M]
Length = 184
Score = 290 bits (742), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 135/179 (75%), Positives = 159/179 (88%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVEL KDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRASVELTKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM+IAADIC+YTNHNI++E+L
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESL 181
>gi|148559699|ref|YP_001259885.1| ATP-dependent protease peptidase subunit [Brucella ovis ATCC 25840]
gi|166221628|sp|A5VT38|HSLV_BRUO2 RecName: Full=ATP-dependent protease subunit HslV
gi|148370956|gb|ABQ60935.1| heat shock protein HslV [Brucella ovis ATCC 25840]
Length = 184
Score = 290 bits (742), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 136/179 (75%), Positives = 159/179 (88%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKATLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM+IAADIC+YTNHNI++E+L
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESL 181
>gi|239833122|ref|ZP_04681451.1| ATP-dependent protease hslV [Ochrobactrum intermedium LMG 3301]
gi|239825389|gb|EEQ96957.1| ATP-dependent protease hslV [Ochrobactrum intermedium LMG 3301]
Length = 184
Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/179 (74%), Positives = 160/179 (89%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H+ ++ TTI+TVRK G VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHHPTTIYGTTIVTVRKGGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE+GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM IAADIC+YTNHN+++E+L
Sbjct: 123 VLEPEHGVMAIGSGGNYALAAARALVDTDKSAEEIARKAMEIAADICIYTNHNVIVESL 181
>gi|227823915|ref|YP_002827888.1| ATP-dependent protease peptidase subunit [Sinorhizobium fredii
NGR234]
gi|254802420|sp|C3MBC6|HSLV_RHISN RecName: Full=ATP-dependent protease subunit HslV
gi|227342917|gb|ACP27135.1| ATP-dependent protease HslV [Sinorhizobium fredii NGR234]
Length = 185
Score = 288 bits (736), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 134/173 (77%), Positives = 158/173 (91%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MHATTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRRL KG++IAGFAG++ADAFTLL
Sbjct: 10 MHATTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRLSKGDVIAGFAGATADAFTLL 69
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLEQYP+QL+R++VELAKDWR +KYLRNLEAM+L+ADK++TL ITG GDVLEPE+
Sbjct: 70 ERLEAKLEQYPDQLMRAAVELAKDWRTNKYLRNLEAMMLVADKSVTLAITGNGDVLEPEH 129
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G +AIGSGG+YA +AARALM + SAEEIAR+A+ IA DICVYTNHN+V+ETL
Sbjct: 130 GTIAIGSGGNYAFAAARALMDSDKSAEEIARRALQIAGDICVYTNHNVVMETL 182
>gi|150398456|ref|YP_001328923.1| ATP-dependent protease peptidase subunit [Sinorhizobium medicae
WSM419]
gi|189036241|sp|A6UEK8|HSLV_SINMW RecName: Full=ATP-dependent protease subunit HslV
gi|150029971|gb|ABR62088.1| 20S proteasome A and B subunits [Sinorhizobium medicae WSM419]
Length = 185
Score = 288 bits (736), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 135/173 (78%), Positives = 158/173 (91%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MHATTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRRL KG++IAGFAG++ADAFTLL
Sbjct: 10 MHATTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRLSKGDVIAGFAGATADAFTLL 69
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLEQYP+QL+R++VELAKDWR +KYLRNLEAM+L+AD+++TL ITG GDVLEPE+
Sbjct: 70 ERLEVKLEQYPDQLMRAAVELAKDWRTNKYLRNLEAMMLVADRSVTLAITGNGDVLEPEH 129
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G +AIGSGG+YA +AARALM T SAEEIAR+A+ IA DICVYTNHN+VLETL
Sbjct: 130 GTIAIGSGGNYAFAAARALMDTDRSAEEIARRALEIAGDICVYTNHNVVLETL 182
>gi|21759190|sp|Q92TA9|HSLV_RHIME RecName: Full=ATP-dependent protease subunit HslV
Length = 176
Score = 287 bits (735), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 134/173 (77%), Positives = 158/173 (91%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MHATTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRRL KG++IAGFAG++ADAFTLL
Sbjct: 1 MHATTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRLSKGDVIAGFAGATADAFTLL 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLEQYP+QL+R++VELAKDWR +KYLRNLEAM+L+AD+T+TL ITG GDVLEPE+
Sbjct: 61 ERLEAKLEQYPDQLMRAAVELAKDWRTNKYLRNLEAMMLVADRTVTLAITGNGDVLEPEH 120
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G +AIGSGG+YA +AARALM + SAEEIAR+A+ IA DICVYTNHN+V+ETL
Sbjct: 121 GTIAIGSGGNYAFAAARALMDSDKSAEEIARRALEIAGDICVYTNHNVVVETL 173
>gi|15963809|ref|NP_384162.1| ATP-dependent protease peptidase subunit [Sinorhizobium meliloti
1021]
gi|307310997|ref|ZP_07590642.1| 20S proteasome A and B subunits [Sinorhizobium meliloti BL225C]
gi|307321945|ref|ZP_07601327.1| 20S proteasome A and B subunits [Sinorhizobium meliloti AK83]
gi|15072984|emb|CAC41443.1| Probable heat shock protein [Sinorhizobium meliloti 1021]
gi|306892415|gb|EFN23219.1| 20S proteasome A and B subunits [Sinorhizobium meliloti AK83]
gi|306899677|gb|EFN30304.1| 20S proteasome A and B subunits [Sinorhizobium meliloti BL225C]
Length = 185
Score = 287 bits (735), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 134/173 (77%), Positives = 158/173 (91%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MHATTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRRL KG++IAGFAG++ADAFTLL
Sbjct: 10 MHATTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRLSKGDVIAGFAGATADAFTLL 69
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLEQYP+QL+R++VELAKDWR +KYLRNLEAM+L+AD+T+TL ITG GDVLEPE+
Sbjct: 70 ERLEAKLEQYPDQLMRAAVELAKDWRTNKYLRNLEAMMLVADRTVTLAITGNGDVLEPEH 129
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G +AIGSGG+YA +AARALM + SAEEIAR+A+ IA DICVYTNHN+V+ETL
Sbjct: 130 GTIAIGSGGNYAFAAARALMDSDKSAEEIARRALEIAGDICVYTNHNVVVETL 182
>gi|153008175|ref|YP_001369390.1| ATP-dependent protease peptidase subunit [Ochrobactrum anthropi
ATCC 49188]
gi|166222988|sp|A6WX57|HSLV_OCHA4 RecName: Full=ATP-dependent protease subunit HslV
gi|151560063|gb|ABS13561.1| 20S proteasome A and B subunits [Ochrobactrum anthropi ATCC 49188]
Length = 184
Score = 287 bits (735), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 134/179 (74%), Positives = 159/179 (88%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H+ ++ TTI+TVRK VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHHPTTIYGTTIVTVRKGNKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE+GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM IAADIC+YTNHNI++E+L
Sbjct: 123 VLEPEHGVMAIGSGGNYALAAARALVDTDKSAEEIARKAMDIAADICIYTNHNIIVESL 181
>gi|222084249|ref|YP_002542775.1| heat shock protease HslVU [Agrobacterium radiobacter K84]
gi|254802324|sp|B9JG70|HSLV_AGRRK RecName: Full=ATP-dependent protease subunit HslV
gi|221721697|gb|ACM24853.1| heat shock protease HslVU [Agrobacterium radiobacter K84]
Length = 175
Score = 287 bits (734), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 133/170 (78%), Positives = 158/170 (92%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+T+RK G VV+AGDGQVSLGQTVMK NARKVRR+GKG++IAGFAG++ADAFTLLERL
Sbjct: 2 TTIVTIRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGDVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK++TL ITG GDVLEPE+G +
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSVTLAITGNGDVLEPEHGAL 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YAL+AARALM T SAE++AR+A+ IAADICVYTNHN+V+ETL
Sbjct: 122 AIGSGGNYALAAARALMDTDKSAEDVARRALDIAADICVYTNHNVVIETL 171
>gi|209551553|ref|YP_002283470.1| ATP-dependent protease peptidase subunit [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|238065933|sp|B5ZV98|HSLV_RHILW RecName: Full=ATP-dependent protease subunit HslV
gi|209537309|gb|ACI57244.1| 20S proteasome A and B subunits [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 175
Score = 286 bits (732), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 136/172 (79%), Positives = 156/172 (90%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG++A +AARALM T SAEEIAR+A+ IAADICVYTNHNIV+E+L V
Sbjct: 122 AIGSGGNFAFAAARALMDTDKSAEEIARRALEIAADICVYTNHNIVVESLDV 173
>gi|327189985|gb|EGE57107.1| ATP-dependent protease peptidase subunit [Rhizobium etli CNPAF512]
Length = 175
Score = 286 bits (732), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 136/172 (79%), Positives = 156/172 (90%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG++A +AARALM T SAEEIAR+A+ IAADICVYTNHNIV+E+L V
Sbjct: 122 AIGSGGNFAFAAARALMDTDKSAEEIARRALDIAADICVYTNHNIVVESLDV 173
>gi|218508804|ref|ZP_03506682.1| ATP-dependent protease peptidase subunit [Rhizobium etli Brasil 5]
Length = 175
Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 135/172 (78%), Positives = 155/172 (90%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG++A +AARALM T SAEEIAR+A+ IAADICVYTNHNIV+E+L V
Sbjct: 122 AIGSGGNFAFAAARALMDTDKSAEEIARRALDIAADICVYTNHNIVVESLDV 173
>gi|86355716|ref|YP_467608.1| ATP-dependent protease peptidase subunit [Rhizobium etli CFN 42]
gi|123513488|sp|Q2KE55|HSLV_RHIEC RecName: Full=ATP-dependent protease subunit HslV
gi|86279818|gb|ABC88881.1| heat shock protease HslVU, subunit HslV protein [Rhizobium etli CFN
42]
Length = 175
Score = 284 bits (727), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/172 (78%), Positives = 155/172 (90%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG++IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGDVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG++A +AARALM T AEEIAR+A+ IAADICVYTNHNIV+E L V
Sbjct: 122 AIGSGGNFAFAAARALMDTDKPAEEIARRALDIAADICVYTNHNIVVELLDV 173
>gi|190889690|ref|YP_001976232.1| ATP-dependent heat shock protease HslVU protein, peptidase subunit
HslV [Rhizobium etli CIAT 652]
gi|238065932|sp|B3PWI6|HSLV_RHIE6 RecName: Full=ATP-dependent protease subunit HslV
gi|190694969|gb|ACE89054.1| ATP-dependent heat shock protease HslVU protein, peptidase subunit
HslV [Rhizobium etli CIAT 652]
Length = 175
Score = 284 bits (726), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 134/172 (77%), Positives = 155/172 (90%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG ++AGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVVAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG++A +AARALM T SAEEIAR+A+ IAADICVYTNHNIV+E+L V
Sbjct: 122 AIGSGGNFAFAAARALMDTDKSAEEIARRALDIAADICVYTNHNIVVESLDV 173
>gi|260460978|ref|ZP_05809227.1| 20S proteasome A and B subunits [Mesorhizobium opportunistum
WSM2075]
gi|259033012|gb|EEW34274.1| 20S proteasome A and B subunits [Mesorhizobium opportunistum
WSM2075]
Length = 183
Score = 283 bits (725), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 136/177 (76%), Positives = 157/177 (88%), Gaps = 1/177 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSSADAFTL 71
MHATTI+TVRK VVIAGDGQVSLGQT+MK NARKVRR+GKG N+IAGFAG++ADAFTL
Sbjct: 7 MHATTIVTVRKGNKVVIAGDGQVSLGQTIMKGNARKVRRIGKGGNVIAGFAGATADAFTL 66
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLEQYP+QL R+ VELAKDWR D+YLR LEAM+L+ADK+++L +TG GDVLEPE
Sbjct: 67 LERLEAKLEQYPDQLTRACVELAKDWRTDRYLRRLEAMMLVADKSVSLALTGTGDVLEPE 126
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+GVMAIGSGG+YAL+AARALM T AEEIARKAM IA+DICVYTN+N V+ETL G
Sbjct: 127 HGVMAIGSGGNYALAAARALMDTDKDAEEIARKAMQIASDICVYTNNNFVVETLDAG 183
>gi|218458684|ref|ZP_03498775.1| ATP-dependent protease peptidase subunit [Rhizobium etli Kim 5]
Length = 175
Score = 283 bits (725), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 134/172 (77%), Positives = 155/172 (90%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG++A +AARALM T SAEEIAR+A+ IAADICVYTNHN+V+E+L V
Sbjct: 122 AIGSGGNFAFAAARALMDTDKSAEEIARRALEIAADICVYTNHNLVVESLDV 173
>gi|325291498|ref|YP_004277362.1| heat shock protein HslV [Agrobacterium sp. H13-3]
gi|325059351|gb|ADY63042.1| heat shock protein HslV [Agrobacterium sp. H13-3]
Length = 174
Score = 283 bits (723), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 132/170 (77%), Positives = 155/170 (91%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLL+RL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLDRL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G +
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGAI 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AARA+M T SAEE+ARK++ IAADICVYTNHN+V+ETL
Sbjct: 122 AIGSGGNYAFAAARAMMDTDKSAEEVARKSLDIAADICVYTNHNLVIETL 171
>gi|13474179|ref|NP_105747.1| ATP-dependent protease peptidase subunit [Mesorhizobium loti
MAFF303099]
gi|21759196|sp|Q98CT8|HSLV_RHILO RecName: Full=ATP-dependent protease subunit HslV
gi|14024931|dbj|BAB51533.1| heat shock protein HslV, proteasome-related peptidase subunit
[Mesorhizobium loti MAFF303099]
Length = 177
Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/174 (77%), Positives = 156/174 (89%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSSADAFTL 71
MHATTI+TVRK VVIAGDGQVSLGQT+MK NARKVRR+GKG N+IAGFAG++ADAFTL
Sbjct: 1 MHATTIVTVRKGNKVVIAGDGQVSLGQTIMKGNARKVRRIGKGGNVIAGFAGATADAFTL 60
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLEQYP+QL R+ VELAKDWR D+YLR LEAM+L+ADK+++L +TG GDVLEPE
Sbjct: 61 LERLEAKLEQYPDQLTRACVELAKDWRTDRYLRRLEAMMLVADKSVSLALTGTGDVLEPE 120
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+GVMAIGSGG+YAL+AARALM T AEEIARKAM IA+DICVYTN+N V+ETL
Sbjct: 121 HGVMAIGSGGNYALAAARALMDTDKDAEEIARKAMQIASDICVYTNNNFVVETL 174
>gi|229007174|ref|NP_353083.3| ATP-dependent protease peptidase subunit [Agrobacterium tumefaciens
str. C58]
gi|21759163|sp|Q8UJ88|HSLV_AGRT5 RecName: Full=ATP-dependent protease subunit HslV
Length = 174
Score = 281 bits (719), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/170 (77%), Positives = 155/170 (91%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLL+RL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLDRL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G +
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGAI 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AARA+M T SAEE+AR+++ IAADICVYTNHN+V+ETL
Sbjct: 122 AIGSGGNYAFAAARAMMDTDKSAEEVARQSLDIAADICVYTNHNLVVETL 171
>gi|222147042|ref|YP_002547999.1| ATP-dependent protease peptidase subunit [Agrobacterium vitis S4]
gi|254802325|sp|B9JXW5|HSLV_AGRVS RecName: Full=ATP-dependent protease subunit HslV
gi|221734032|gb|ACM34995.1| heat shock protein hslV [Agrobacterium vitis S4]
Length = 186
Score = 280 bits (716), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 137/174 (78%), Positives = 160/174 (91%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MH TTI+TVRK G+VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLL
Sbjct: 10 MHGTTIITVRKGGMVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLL 69
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLEKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADKT+TL ITG GDVLEPE+
Sbjct: 70 ERLEKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKTVTLAITGNGDVLEPEH 129
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G +AIGSGG+YAL+AA ALM T+ SAEE+ARKAM IAADICVYTN N+++ETL+
Sbjct: 130 GTIAIGSGGNYALAAALALMDTEKSAEEVARKAMKIAADICVYTNENVLVETLE 183
>gi|319780229|ref|YP_004139705.1| 20S proteasome A and subunit betas [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166117|gb|ADV09655.1| 20S proteasome A and B subunits [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 183
Score = 278 bits (711), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 133/174 (76%), Positives = 155/174 (89%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSSADAFTL 71
MHATTI+TVRK VVIAGDGQVSLGQT+MK NA+KVRR+GKG N+IAGFAG++ADAFTL
Sbjct: 7 MHATTIVTVRKGNKVVIAGDGQVSLGQTIMKGNAKKVRRIGKGGNVIAGFAGATADAFTL 66
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLEQYP+QL R+ VELAKDWR D+YLR LEAM+L+ADK+++L +TG GDVLEPE
Sbjct: 67 LERLEAKLEQYPDQLTRACVELAKDWRTDRYLRRLEAMMLVADKSVSLALTGTGDVLEPE 126
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GVMAIGSGG+YAL+AARALM + AEEIARKAM IA+DICVYTN+N V+ETL
Sbjct: 127 FGVMAIGSGGNYALAAARALMDSDKDAEEIARKAMQIASDICVYTNNNFVVETL 180
>gi|163757485|ref|ZP_02164574.1| ATP-dependent protease peptidase subunit [Hoeflea phototrophica
DFL-43]
gi|162284987|gb|EDQ35269.1| ATP-dependent protease peptidase subunit [Hoeflea phototrophica
DFL-43]
Length = 186
Score = 277 bits (709), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 134/177 (75%), Positives = 156/177 (88%), Gaps = 1/177 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAFT 70
+MHATTI+TVRK VV+AGDGQVSLGQTVMK NARKVRR+GK N ++AGFAG++ADAFT
Sbjct: 9 QMHATTIITVRKGNQVVMAGDGQVSLGQTVMKGNARKVRRIGKDNSVVAGFAGATADAFT 68
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LLERLE KLEQYP+QL R++VELAKDWR D+YLR LEAM+L+ADKT+TL ITG GDVLEP
Sbjct: 69 LLERLEAKLEQYPDQLTRAAVELAKDWRTDRYLRRLEAMMLVADKTVTLAITGNGDVLEP 128
Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
E+G MAIGSGG+YA +AARALM SAEEIAR+AM IA DICVYTN NIV+ETL++
Sbjct: 129 EHGTMAIGSGGNYAYAAARALMDGDKSAEEIARRAMEIAGDICVYTNTNIVIETLEL 185
>gi|312114750|ref|YP_004012346.1| 20S proteasome A and subunit betas [Rhodomicrobium vannielii ATCC
17100]
gi|311219879|gb|ADP71247.1| 20S proteasome A and B subunits [Rhodomicrobium vannielii ATCC
17100]
Length = 190
Score = 275 bits (704), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/183 (71%), Positives = 156/183 (85%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
H H TTILTVRK G VVIAGDGQVSLGQTV+KANA+KVR LGKGN+I+GFAG++A
Sbjct: 8 PHDPTGWHGTTILTVRKGGRVVIAGDGQVSLGQTVIKANAKKVRTLGKGNVISGFAGATA 67
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ERLE KLE YP+QL+R+ V+LAKDWR D+YLR LEAM+++ADK TLV+TG GD
Sbjct: 68 DAFTLFERLESKLEMYPDQLVRACVDLAKDWRTDRYLRRLEAMMIVADKNATLVLTGTGD 127
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
VLEPE+ +M IGSGG+YALSAARAL+ T SAE+IARKAM+IAADICVYTN+NI++E+L
Sbjct: 128 VLEPEHAIMGIGSGGNYALSAARALLDTDLSAEDIARKAMAIAADICVYTNNNIIVESLP 187
Query: 187 VGD 189
D
Sbjct: 188 SND 190
>gi|241206992|ref|YP_002978088.1| ATP-dependent protease peptidase subunit [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240860882|gb|ACS58549.1| 20S proteasome A and B subunits [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 175
Score = 271 bits (692), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/170 (78%), Positives = 155/170 (91%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++AL+AA ALM T SAEEIAR+A+ IAADICVYTNHN+V+E+L
Sbjct: 122 AIGSGGNFALAAALALMDTDKSAEEIARRALDIAADICVYTNHNVVVESL 171
>gi|121602221|ref|YP_989510.1| ATP-dependent protease peptidase subunit [Bartonella bacilliformis
KC583]
gi|120614398|gb|ABM44999.1| peptidase, T1 family [Bartonella bacilliformis KC583]
Length = 193
Score = 270 bits (691), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 155/180 (86%), Gaps = 1/180 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSS 65
+H +M+ TTI+TVRK VVIAGDGQVSLGQT+MK+NARKVRRLGK G +IAGFAG++
Sbjct: 3 EHKPDRMYGTTIITVRKGSKVVIAGDGQVSLGQTIMKSNARKVRRLGKDGTVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERL KLEQYPNQL+R+ VELAKDWR D+YLR LEAM+L+ADK TLV+TG+G
Sbjct: 63 ADAFTLLERLGMKLEQYPNQLMRACVELAKDWRTDRYLRRLEAMMLVADKKTTLVLTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEP++G+MAIGSGG++ALSAARALM AE IARKAM+IAA+ICVYTN N +ETL
Sbjct: 123 DVLEPKDGIMAIGSGGNFALSAARALMDMDLDAEAIARKAMNIAAEICVYTNDNFTIETL 182
>gi|319898328|ref|YP_004158421.1| heat shock protein [Bartonella clarridgeiae 73]
gi|319402292|emb|CBI75831.1| heat shock protein [Bartonella clarridgeiae 73]
Length = 193
Score = 269 bits (688), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 153/180 (85%), Gaps = 1/180 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSS 65
+H M+ TTI+TVRKD VV+AGDGQVSLGQT+MK+NARKVRRLGKG +IAGFAG++
Sbjct: 3 EHKPNIMYGTTIVTVRKDNKVVMAGDGQVSLGQTIMKSNARKVRRLGKGGTVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK +TL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKVTLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GVMAIGSGG++ALSAAR LM AE IA KAMSIAA ICVYTN N +ETL
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARVLMDIDLDAEAIACKAMSIAAKICVYTNDNFTIETL 182
>gi|163867503|ref|YP_001608702.1| ATP-dependent protease peptidase subunit [Bartonella tribocorum CIP
105476]
gi|161017149|emb|CAK00707.1| heat shock protein [Bartonella tribocorum CIP 105476]
Length = 193
Score = 269 bits (687), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 154/180 (85%), Gaps = 1/180 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSS 65
+H M+ TTI+TVRK G VV+AGDGQVSLGQT+MK NARKVRRLGK G +IAGFAG++
Sbjct: 3 EHKPDIMYGTTIITVRKGGKVVMAGDGQVSLGQTIMKGNARKVRRLGKSGVVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK +TL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKVTLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GVMAIGSGG++ALSAARALM AE IARKAM+IAA ICVYTN + +ETL
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARALMDLDLDAETIARKAMAIAAKICVYTNDHFTIETL 182
>gi|116249815|ref|YP_765653.1| ATP-dependent protease peptidase subunit [Rhizobium leguminosarum
bv. viciae 3841]
gi|189036232|sp|Q1MNB5|HSLV_RHIL3 RecName: Full=ATP-dependent protease subunit HslV
gi|115254463|emb|CAK05537.1| ATP-dependent protease hslV (EC 3.4.25.-) (Heat shock protein hslV)
[Rhizobium leguminosarum bv. viciae 3841]
Length = 175
Score = 269 bits (687), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/170 (78%), Positives = 154/170 (90%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG ++AGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVVAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++AL+AA ALM T SAEEIAR+A+ IAADICVYTNHN+V+E L
Sbjct: 122 AIGSGGNFALAAALALMDTDKSAEEIARRALDIAADICVYTNHNVVVELL 171
>gi|39933385|ref|NP_945661.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
palustris CGA009]
gi|47605596|sp|P61477|HSLV_RHOPA RecName: Full=ATP-dependent protease subunit HslV
gi|39653010|emb|CAE25752.1| heat shock protein HslV, proteasome-related peptidase subunit
[Rhodopseudomonas palustris CGA009]
Length = 189
Score = 268 bits (686), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 149/172 (86%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTILTVRK G VVI GDGQVS+GQTV+KANA+KVR+LGKG++I GFAG++ADAFTL E
Sbjct: 16 HGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAFTLFE 75
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVLEPE G
Sbjct: 76 RLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEAG 135
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VMAIGSGG+YAL+AARAL+ T AE I RK++ IAADICVYTN N+ LETL
Sbjct: 136 VMAIGSGGNYALAAARALIDTDQDAETIVRKSLGIAADICVYTNGNLTLETL 187
>gi|240849873|ref|YP_002971261.1| heat shock protein HslV [Bartonella grahamii as4aup]
gi|240266996|gb|ACS50584.1| heat shock protein HslV [Bartonella grahamii as4aup]
Length = 193
Score = 268 bits (686), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 154/180 (85%), Gaps = 1/180 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSS 65
+H M+ TTI+TVRK G VV+AGDGQVSLGQT+MK NARKVRRLGK G +IAGFAG++
Sbjct: 3 EHKPDIMYGTTIITVRKGGKVVMAGDGQVSLGQTIMKGNARKVRRLGKNGVVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK +TL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKVTLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GVMAIGSGG++ALSAARALM AE IARKAM+IAA ICVYTN + +ETL
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARALMDLDLDAETIARKAMAIAAKICVYTNDHFTIETL 182
>gi|148251767|ref|YP_001236352.1| ATP-dependent protease peptidase subunit [Bradyrhizobium sp. BTAi1]
gi|166221626|sp|A5E8F2|HSLV_BRASB RecName: Full=ATP-dependent protease subunit HslV
gi|146403940|gb|ABQ32446.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Bradyrhizobium sp. BTAi1]
Length = 186
Score = 268 bits (684), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 125/178 (70%), Positives = 149/178 (83%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H H TTILTVRK G VVI GDGQVS+GQTV+K+NARKVR+LGKG++I GFAG++AD
Sbjct: 6 HEPAVWHGTTILTVRKGGRVVIGGDGQVSIGQTVIKSNARKVRKLGKGDVIGGFAGATAD 65
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDV
Sbjct: 66 AFTLFERLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKEVSLVLTGTGDV 125
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE GVMAIGSGG+YAL+AARAL+ T AE I R+++ IAADICVYTN NI +E L
Sbjct: 126 LEPEAGVMAIGSGGNYALAAARALIDTDKDAESIVRRSLDIAADICVYTNRNITIEAL 183
>gi|323138812|ref|ZP_08073876.1| 20S proteasome, A and B subunits [Methylocystis sp. ATCC 49242]
gi|322395960|gb|EFX98497.1| 20S proteasome, A and B subunits [Methylocystis sp. ATCC 49242]
Length = 187
Score = 267 bits (683), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/177 (72%), Positives = 152/177 (85%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MHATTI+ V+K G VIAGDGQVSLGQT+MK NARKVRRLGKG++IAGFAG++ADAFTL
Sbjct: 11 MHATTIILVKKQGQTVIAGDGQVSLGQTIMKGNARKVRRLGKGDVIAGFAGATADAFTLF 70
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
ERLE KL+QYP QL+R+ VELAKDWRMD+YLR LEAM+L+AD+ + LV+TG GDVLEPE
Sbjct: 71 ERLESKLDQYPGQLMRACVELAKDWRMDRYLRRLEAMMLVADQNVGLVLTGSGDVLEPEG 130
Query: 132 --NG-VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
NG V AIGSGG+YAL+A RAL+ T AE IAR+AMSIAADICVYTNHN+V+E +
Sbjct: 131 DANGAVAAIGSGGNYALAAGRALIDTPADAETIARRAMSIAADICVYTNHNVVVEKI 187
>gi|85714081|ref|ZP_01045070.1| ATP-dependent protease peptidase subunit [Nitrobacter sp. Nb-311A]
gi|85699207|gb|EAQ37075.1| ATP-dependent protease peptidase subunit [Nitrobacter sp. Nb-311A]
Length = 177
Score = 267 bits (683), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 149/172 (86%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTILTVRK G VVI GDGQVS+GQTV+K+NA+KVRRLGKG++I GFAG++ADAFTL E
Sbjct: 3 HGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNAKKVRRLGKGDVIGGFAGATADAFTLFE 62
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL R++VELAKDWR D+YLR LEAM+L+ADK ++LV+TG GDVLEPE G
Sbjct: 63 RLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMLVADKDVSLVLTGTGDVLEPEAG 122
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VMAIGSGG+YAL+AARAL+ + N AE I R+++ IAADICVYTN N+ +E L
Sbjct: 123 VMAIGSGGNYALAAARALIDSDNEAESIVRRSLDIAADICVYTNRNLTIEAL 174
>gi|49475019|ref|YP_033060.1| ATP-dependent protease peptidase subunit [Bartonella henselae str.
Houston-1]
gi|85542196|sp|Q6G5G1|HSLV_BARHE RecName: Full=ATP-dependent protease subunit HslV
gi|49237824|emb|CAF27019.1| Heat shock protein hslV [Bartonella henselae str. Houston-1]
Length = 193
Score = 267 bits (683), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 154/180 (85%), Gaps = 1/180 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSS 65
+H M+ TTI+TVRK G VV+AGDGQVSLGQT+MK NARKVRRLGK G +IAGFAG++
Sbjct: 3 EHKPDIMYGTTIITVRKGGKVVMAGDGQVSLGQTIMKGNARKVRRLGKSGAVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK ITL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKITLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+G+MAIGSGG++ALSAARAL+ AE IARKAM+IAA ICVYTN + +ETL
Sbjct: 123 DVLEPEDGIMAIGSGGNFALSAARALIDMDLDAETIARKAMNIAAKICVYTNDHFTIETL 182
>gi|319408003|emb|CBI81657.1| heat shock protein [Bartonella schoenbuchensis R1]
Length = 186
Score = 267 bits (682), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 156/180 (86%), Gaps = 1/180 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSS 65
+H + +M+ TTI+TVRK VV+AGDGQVSLGQT+MK NARKVRRLGKG +IAGFAG++
Sbjct: 3 EHKSDRMYGTTIVTVRKGDKVVMAGDGQVSLGQTIMKGNARKVRRLGKGGTVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK +TL +TG+G
Sbjct: 63 ADAFTLLERLEIKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKVTLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+G+MAIGSGG++ALSAARAL+ T A+ IA KAMSIAA+ICVYTN N +ETL
Sbjct: 123 DVLEPEDGIMAIGSGGNFALSAARALIDTDLDAKAIACKAMSIAAEICVYTNGNFTIETL 182
>gi|92115753|ref|YP_575482.1| ATP-dependent protease peptidase subunit [Nitrobacter hamburgensis
X14]
gi|122418928|sp|Q1QRX5|HSLV_NITHX RecName: Full=ATP-dependent protease subunit HslV
gi|91798647|gb|ABE61022.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Nitrobacter hamburgensis X14]
Length = 184
Score = 267 bits (682), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 149/172 (86%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTILTVRK G VVI GDGQVS+GQTV+K+NA+KVR+LGKG++I GFAG++ADAFTL E
Sbjct: 10 HGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNAKKVRKLGKGDVIGGFAGATADAFTLFE 69
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL R++VELAKDWR D+YLR LEAM+L+ADK ++LV+TG GDVLEPE G
Sbjct: 70 RLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMLVADKDVSLVLTGTGDVLEPEAG 129
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VMAIGSGG+YALSAARAL+ + AE I R+++ IAADICVYTN N+ +ETL
Sbjct: 130 VMAIGSGGNYALSAARALIDSDKDAETIVRRSLDIAADICVYTNRNLTIETL 181
>gi|115522399|ref|YP_779310.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
palustris BisA53]
gi|115516346|gb|ABJ04330.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodopseudomonas palustris BisA53]
Length = 190
Score = 267 bits (682), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 150/172 (87%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTILTVRK G VVI GDGQVS+GQTV+K NA+KVRRLGKG++I GFAG++ADAFTL E
Sbjct: 17 HGTTILTVRKGGKVVIGGDGQVSIGQTVIKHNAKKVRRLGKGDVIGGFAGATADAFTLFE 76
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVLEPE G
Sbjct: 77 RLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEAG 136
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VMAIGSGG+YAL+AARAL+ T+ AE I RKA++IAADICVYTN ++ +ETL
Sbjct: 137 VMAIGSGGNYALAAARALVDTEQDAEAIVRKALAIAADICVYTNGHVTIETL 188
>gi|316931712|ref|YP_004106694.1| 20S proteasome subunits A/B [Rhodopseudomonas palustris DX-1]
gi|315599426|gb|ADU41961.1| 20S proteasome A and B subunits [Rhodopseudomonas palustris DX-1]
Length = 187
Score = 267 bits (682), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 125/172 (72%), Positives = 149/172 (86%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTILTVRK G VVI GDGQVS+GQTV+KANA+KVR+LGKG++I GFAG++ADAFTL E
Sbjct: 16 HGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAFTLFE 75
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVLEPE G
Sbjct: 76 RLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEAG 135
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VMAIGSGG+YAL+AARAL+ T AE I RK++ IAADICVYTN N+ +ETL
Sbjct: 136 VMAIGSGGNYALAAARALIDTDQDAEAIVRKSLGIAADICVYTNGNLTIETL 187
>gi|90421827|ref|YP_530197.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
palustris BisB18]
gi|90103841|gb|ABD85878.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodopseudomonas palustris BisB18]
Length = 190
Score = 266 bits (679), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 149/172 (86%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTILTVRK G VVI GDGQVS+GQTV+K+NARKVR+LGKG++I GFAG++ADAFTL E
Sbjct: 17 HGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNARKVRKLGKGDVIGGFAGATADAFTLFE 76
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVLEPE G
Sbjct: 77 RLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKEVSLVLTGTGDVLEPEAG 136
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VMAIGSGG+YAL+AARAL+ + AE I R+++ IAADICVYTN N+ +ETL
Sbjct: 137 VMAIGSGGNYALAAARALIDSDKDAEAIVRRSLDIAADICVYTNRNVTVETL 188
>gi|75674326|ref|YP_316747.1| ATP-dependent protease peptidase subunit [Nitrobacter winogradskyi
Nb-255]
gi|123614341|sp|Q3SWE6|HSLV_NITWN RecName: Full=ATP-dependent protease subunit HslV
gi|74419196|gb|ABA03395.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Nitrobacter winogradskyi Nb-255]
Length = 184
Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 148/172 (86%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTILTVRK G VVI GDGQVS+GQTV+K+NA+KVR+LGKG++I GFAG++ADAFTL E
Sbjct: 10 HGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNAKKVRKLGKGDVIGGFAGATADAFTLFE 69
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL R++VELAKDWR D+YLR LEAM+L+ADK ++LV+TG GDVLEPE+G
Sbjct: 70 RLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMLVADKDVSLVLTGTGDVLEPESG 129
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VMAIGSGG+YAL+AARAL+ + AE I R A+ IAADICVYTN N+ +E L
Sbjct: 130 VMAIGSGGNYALAAARALIDSDKDAETIVRSALDIAADICVYTNRNLTIEAL 181
>gi|209883548|ref|YP_002287405.1| ATP-dependent protease HslV [Oligotropha carboxidovorans OM5]
gi|229486363|sp|B6JAL5|HSLV_OLICO RecName: Full=ATP-dependent protease subunit HslV
gi|209871744|gb|ACI91540.1| ATP-dependent protease HslV [Oligotropha carboxidovorans OM5]
Length = 183
Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/176 (69%), Positives = 150/176 (85%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
A H TTILTVRK G VVI GDGQVS+GQTV+K+NARKVR+LGKG++I GFAG++ADAF
Sbjct: 6 AESWHGTTILTVRKGGRVVIGGDGQVSIGQTVIKSNARKVRKLGKGDVIGGFAGATADAF 65
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ERLE KLEQYP QL R+ VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVLE
Sbjct: 66 TLFERLEAKLEQYPGQLTRACVELAKDWRTDRYLRRLEAMMIVADKEVSLVLTGTGDVLE 125
Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
PE+GVMAIGSGG+YAL+AARAL +++ AE I R+++ IAADICVYTN N+ +E L
Sbjct: 126 PEDGVMAIGSGGNYALAAARALSDSEHDAETIVRRSLEIAADICVYTNRNVTIEAL 181
>gi|49473862|ref|YP_031904.1| ATP-dependent protease peptidase subunit [Bartonella quintana str.
Toulouse]
gi|85542197|sp|Q6G0Q0|HSLV_BARQU RecName: Full=ATP-dependent protease subunit HslV
gi|49239365|emb|CAF25698.1| Heat shock protein hslV [Bartonella quintana str. Toulouse]
Length = 193
Score = 264 bits (675), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 151/180 (83%), Gaps = 1/180 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSS 65
+H M+ TTI+TVRK G VVIAGDGQVS GQT+MK NARKVRRLGK G +IAGFAG++
Sbjct: 3 EHKPDIMYGTTIITVRKGGKVVIAGDGQVSFGQTIMKGNARKVRRLGKSGTVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK ITL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKITLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+G+MAIGSGG++ALSAA AL+ AE IARKAM IAA ICVYTN + +ETL
Sbjct: 123 DVLEPEDGIMAIGSGGNFALSAAWALVDMNLDAETIARKAMDIAAKICVYTNDHFTIETL 182
>gi|319403620|emb|CBI77205.1| heat shock protein [Bartonella rochalimae ATCC BAA-1498]
Length = 193
Score = 263 bits (673), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 151/180 (83%), Gaps = 1/180 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSS 65
+H M+ TTI+TVRK VV+AGDGQVSLGQT+MK+NARKVRRLGK G +IAGFAG++
Sbjct: 3 EHKPDIMYGTTIVTVRKGNKVVMAGDGQVSLGQTIMKSNARKVRRLGKSGAVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+AD+ TL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADQKTTLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GVMAIGSGG++ALSAAR LM AE IA KAMSIAA ICVYTN N +ETL
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARVLMDMDLDAETIASKAMSIAAKICVYTNDNFTIETL 182
>gi|159139475|gb|AAK85868.2| heat shock protein hslV [Agrobacterium tumefaciens str. C58]
Length = 160
Score = 263 bits (673), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 121/157 (77%), Positives = 144/157 (91%)
Query: 29 IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLL+RLEKKLEQYP QL+R
Sbjct: 1 MAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLDRLEKKLEQYPGQLMR 60
Query: 89 SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA 148
++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G +AIGSGG+YA +AA
Sbjct: 61 AAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGAIAIGSGGNYAFAAA 120
Query: 149 RALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
RA+M T SAEE+AR+++ IAADICVYTNHN+V+ETL
Sbjct: 121 RAMMDTDKSAEEVARQSLDIAADICVYTNHNLVVETL 157
>gi|319405091|emb|CBI78695.1| heat shock protein [Bartonella sp. AR 15-3]
Length = 193
Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 152/180 (84%), Gaps = 1/180 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSS 65
+H M+ TTI+TVRK VV+AGDGQVSLGQT+MK+NARKVRRLGKG +IAGFAG++
Sbjct: 3 EHKPDIMYGTTIVTVRKGNKVVMAGDGQVSLGQTIMKSNARKVRRLGKGGAVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+AD+ TL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADQKATLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GVMAIGSGG++ALSAAR LM T AE IA KAMSIAA ICVYTN + +ETL
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARVLMDTDLDAETIACKAMSIAAKICVYTNDHFTIETL 182
>gi|240137219|ref|YP_002961688.1| ATP-dependent protease hslV [Methylobacterium extorquens AM1]
gi|240007185|gb|ACS38411.1| ATP-dependent protease hslV [Methylobacterium extorquens AM1]
Length = 186
Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/176 (71%), Positives = 147/176 (83%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++ADAFTL
Sbjct: 10 QMHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGTVIGGFAGATADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+ADK ++L+++G GDVLEPE
Sbjct: 70 FERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADKEVSLLLSGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
GVMAIGSGG+YALSAARAL + AE I R++M IAA+ICVYTN N+V+ETL V
Sbjct: 130 TGVMAIGSGGNYALSAARALEDGELDAEAIVRRSMKIAAEICVYTNGNLVIETLDV 185
>gi|319406536|emb|CBI80178.1| heat shock protein [Bartonella sp. 1-1C]
Length = 193
Score = 261 bits (668), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/180 (71%), Positives = 150/180 (83%), Gaps = 1/180 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSS 65
+H M+ TTI+TVRK VV+AGDGQVSLGQT+MK+NARKVRRLGK G +IAGFAG++
Sbjct: 3 EHKPDIMYGTTIVTVRKGNKVVMAGDGQVSLGQTIMKSNARKVRRLGKSGAVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+AD+ TL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADQKTTLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GVMAIGSGG++ALSAAR LM AE IA KAMSIAA ICVYTN N +E L
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARVLMDMDLDAETIASKAMSIAAKICVYTNDNFTIEAL 182
>gi|254470862|ref|ZP_05084265.1| ATP-dependent protease HslV [Pseudovibrio sp. JE062]
gi|211960004|gb|EEA95201.1| ATP-dependent protease HslV [Pseudovibrio sp. JE062]
Length = 182
Score = 261 bits (668), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/174 (71%), Positives = 146/174 (83%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTILTVRK G VVIAGDGQVSLG TV+K ARKVR L G +IAGFAG++ADAFTL
Sbjct: 6 QWHGTTILTVRKGGKVVIAGDGQVSLGSTVIKGTARKVRPLAGGKVIAGFAGATADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERLE KLEQYPNQL+R+ VE+AKDWR D+YLR LEAM+L+ADK +LV+TG GDVLEPE
Sbjct: 66 FERLEAKLEQYPNQLMRACVEMAKDWRTDRYLRRLEAMMLVADKKHSLVLTGTGDVLEPE 125
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
NGVM IGSGG++ALSAARAL+ +AEEI RK+M+IAADICVYTN N+ +E L
Sbjct: 126 NGVMGIGSGGNFALSAARALVDMDLTAEEICRKSMTIAADICVYTNSNVTVEIL 179
>gi|163850086|ref|YP_001638129.1| ATP-dependent protease peptidase subunit [Methylobacterium
extorquens PA1]
gi|254559231|ref|YP_003066326.1| ATP-dependent protease hslV [Methylobacterium extorquens DM4]
gi|226704545|sp|A9W0F2|HSLV_METEP RecName: Full=ATP-dependent protease subunit HslV
gi|163661691|gb|ABY29058.1| 20S proteasome A and B subunits [Methylobacterium extorquens PA1]
gi|254266509|emb|CAX22273.1| ATP-dependent protease hslV [Methylobacterium extorquens DM4]
Length = 186
Score = 261 bits (666), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 124/174 (71%), Positives = 146/174 (83%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++ADAFTL
Sbjct: 10 QMHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGTVIGGFAGATADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+ADK ++L+++G GDVLEPE
Sbjct: 70 FERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADKEVSLLLSGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GVMAIGSGG+YALSAARAL + AE I R++M IAA+ICVYTN N+V+ETL
Sbjct: 130 TGVMAIGSGGNYALSAARALEDGELDAEAIVRRSMKIAAEICVYTNGNLVIETL 183
>gi|188579891|ref|YP_001923336.1| ATP-dependent protease peptidase subunit [Methylobacterium populi
BJ001]
gi|179343389|gb|ACB78801.1| 20S proteasome A and B subunits [Methylobacterium populi BJ001]
Length = 206
Score = 260 bits (664), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 122/177 (68%), Positives = 148/177 (83%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG++I GFAG++ADAFTL
Sbjct: 30 QMHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGSVIGGFAGATADAFTL 89
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+ADK ++L+++G GDVLEPE
Sbjct: 90 FERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADKDVSLLLSGSGDVLEPE 149
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
GVMAIGSGG++AL+AARAL ++ AE I R++M IAA+ICVYTN N+V+E L G
Sbjct: 150 TGVMAIGSGGNFALAAARALEDGEHDAEAIVRRSMKIAAEICVYTNGNLVIEALDAG 206
>gi|218528689|ref|YP_002419505.1| ATP-dependent protease peptidase subunit [Methylobacterium
chloromethanicum CM4]
gi|254802418|sp|B7KZ47|HSLV_METC4 RecName: Full=ATP-dependent protease subunit HslV
gi|218520992|gb|ACK81577.1| 20S proteasome A and B subunits [Methylobacterium chloromethanicum
CM4]
Length = 186
Score = 258 bits (660), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/174 (71%), Positives = 145/174 (83%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++ADAFTL
Sbjct: 10 QMHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGAVIGGFAGATADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+ADK + L+++G GDVLEPE
Sbjct: 70 FERLEAKLEQYPGQLSRACVELTKDWRTDRYLRRLEAMMLVADKEVGLLLSGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GVMAIGSGG+YALSAARAL + AE I R++M IAA+ICVYTN N+V+ETL
Sbjct: 130 TGVMAIGSGGNYALSAARALEDGELDAEAIVRRSMKIAAEICVYTNGNLVIETL 183
>gi|190571156|ref|YP_001975514.1| heat shock protein HslV [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|226704549|sp|B3CLU4|HSLV_WOLPP RecName: Full=ATP-dependent protease subunit HslV
gi|190357428|emb|CAQ54862.1| heat shock protein HslV [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 184
Score = 258 bits (658), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/180 (66%), Positives = 155/180 (86%), Gaps = 1/180 (0%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H + KM+ TTIL++R+D VV+ GDGQVSLG TV+K+ ARKVRRL ++IAGFAG++AD
Sbjct: 4 HDSSKMYGTTILSIRRDKNVVVIGDGQVSLGHTVIKSGARKVRRLSGDSVIAGFAGATAD 63
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ERLE KL+++P QL+R+ VELAKDWRMDKYLR LEAM+++ADK+I+LVITG GDV
Sbjct: 64 AFTLFERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGDV 123
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
LEPE+G+ AIGSGG++ALSAA+AL+ + S EEIA+KAM IAADICVYTNHN+++E ++
Sbjct: 124 LEPEDGIAAIGSGGNFALSAAKALIDVEGISIEEIAKKAMKIAADICVYTNHNLIIEKIE 183
>gi|225677228|ref|ZP_03788221.1| ATP-dependent protease peptidase subunit [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590752|gb|EEH11986.1| ATP-dependent protease peptidase subunit [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 184
Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 121/181 (66%), Positives = 155/181 (85%), Gaps = 1/181 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H KM+ TTIL++RKD VV+ GDGQVSLG TV+K+ A+KVRRL ++IAGFAG++A
Sbjct: 3 QHDNNKMYGTTILSIRKDKSVVVIGDGQVSLGHTVIKSGAKKVRRLSGDSVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ERLE KL+++P QL+R+ VELAKDWRMDKYLR LEAM+++ADK+I+LVITG GD
Sbjct: 63 DAFTLFERLESKLDKHPGQLVRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE+G+ AIGSGG++ALSAARAL+ + S EEIA+KAM IAADICVYTNHN+++E +
Sbjct: 123 VLEPEDGIAAIGSGGNFALSAARALIDIKGISIEEIAKKAMKIAADICVYTNHNVIIEKI 182
Query: 186 K 186
+
Sbjct: 183 E 183
>gi|94496359|ref|ZP_01302936.1| ATP-dependent protease peptidase subunit [Sphingomonas sp. SKA58]
gi|94424105|gb|EAT09129.1| ATP-dependent protease peptidase subunit [Sphingomonas sp. SKA58]
Length = 180
Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 120/172 (69%), Positives = 149/172 (86%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI++VRK+G VV+AGDGQVS+GQTVMK NARKVRRL G++I GFAG++ADAFTL E
Sbjct: 5 HGTTIMSVRKNGKVVVAGDGQVSMGQTVMKPNARKVRRLHDGSVIGGFAGATADAFTLFE 64
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLE++ QL+R++VELAKDWR DKYLRNLEAM+++ADK +TL++TG GDVLEP NG
Sbjct: 65 RLEAKLERHNGQLMRAAVELAKDWRTDKYLRNLEAMMIVADKDVTLILTGNGDVLEPLNG 124
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG++AL+AARALM + AE +ARKAM++AADICVYTN + +ETL
Sbjct: 125 VAAIGSGGNFALAAARALMDYEQDAEALARKAMAVAADICVYTNDQLTIETL 176
>gi|42520986|ref|NP_966901.1| ATP-dependent protease peptidase subunit [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|58696798|ref|ZP_00372329.1| heat shock protein HslV [Wolbachia endosymbiont of Drosophila
simulans]
gi|58698622|ref|ZP_00373518.1| protease HslVU, subunit HslV [Wolbachia endosymbiont of Drosophila
ananassae]
gi|99036089|ref|ZP_01315123.1| hypothetical protein Wendoof_01000042 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|225630855|ref|YP_002727646.1| ATP-dependent protease, peptidase subunit [Wolbachia sp. wRi]
gi|47605598|sp|P61479|HSLV_WOLPM RecName: Full=ATP-dependent protease subunit HslV
gi|254765623|sp|C0R4L3|HSLV_WOLWR RecName: Full=ATP-dependent protease subunit HslV
gi|42410727|gb|AAS14835.1| heat shock protein HslV [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|58534867|gb|EAL58970.1| protease HslVU, subunit HslV [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58537007|gb|EAL60155.1| heat shock protein HslV [Wolbachia endosymbiont of Drosophila
simulans]
gi|225592836|gb|ACN95855.1| ATP-dependent protease, peptidase subunit [Wolbachia sp. wRi]
Length = 184
Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 122/181 (67%), Positives = 154/181 (85%), Gaps = 1/181 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H KM+ TTIL++RKD VV+ GDGQVSLG TV+K+ A+KVRRL ++IAGFAG++A
Sbjct: 3 QHDNNKMYGTTILSIRKDKSVVVIGDGQVSLGHTVIKSGAKKVRRLSGDSVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ERLE KL+++P QL+R+ VELAKDWRMDKYLR LEAM+++ADK+I+LVITG GD
Sbjct: 63 DAFTLFERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE+GV AIGSGG++ALSAARAL+ + S EEIA+KAM IA DICVYTNHN+V+E +
Sbjct: 123 VLEPEDGVAAIGSGGNFALSAARALIDIKGISIEEIAKKAMKIAGDICVYTNHNVVIEKI 182
Query: 186 K 186
+
Sbjct: 183 E 183
>gi|304392728|ref|ZP_07374668.1| ATP-dependent protease HslVU, peptidase subunit [Ahrensia sp.
R2A130]
gi|303295358|gb|EFL89718.1| ATP-dependent protease HslVU, peptidase subunit [Ahrensia sp.
R2A130]
Length = 188
Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 130/181 (71%), Positives = 159/181 (87%), Gaps = 1/181 (0%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGS 64
++ + K+HATTI+ VRK G VV+AGDGQ S+GQTVMK+N++KVRR+GK G +IAGFAGS
Sbjct: 5 NESWLPKVHATTIIMVRKGGQVVLAGDGQASMGQTVMKSNSKKVRRIGKDGKVIAGFAGS 64
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
+ADAFTLLERLE KLEQYP QL+R+SVELAKDWR D+YLR LEAM+L+ADK ++L +TG+
Sbjct: 65 TADAFTLLERLEGKLEQYPGQLMRASVELAKDWRTDRYLRKLEAMMLVADKEVSLCLTGV 124
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
GDV EPE+GVMAIGSGG+YAL+AARAL T AE IARKAM+IAADICVYTNHN+V+ET
Sbjct: 125 GDVFEPEHGVMAIGSGGNYALAAARALYDTDADAETIARKAMTIAADICVYTNHNLVVET 184
Query: 185 L 185
+
Sbjct: 185 M 185
>gi|114706594|ref|ZP_01439495.1| ATP-dependent protease peptidase subunit [Fulvimarina pelagi
HTCC2506]
gi|114537986|gb|EAU41109.1| ATP-dependent protease peptidase subunit [Fulvimarina pelagi
HTCC2506]
Length = 185
Score = 257 bits (656), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 127/184 (69%), Positives = 160/184 (86%), Gaps = 1/184 (0%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFA 62
M D H +M+ TTI+TVRK+G VV+AGDGQVSLG T++K NARKVRR+GK G +IAGFA
Sbjct: 1 MMDSHKPDQMYGTTIVTVRKNGSVVVAGDGQVSLGNTMIKGNARKVRRIGKQGQVIAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+++ADKT+TL +T
Sbjct: 61 GATADAFTLLERLEGKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMIVADKTVTLTLT 120
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
G GDVLEPE GVMAIGSGG+YAL+AA+AL T+ SAEEIAR+AM IA++IC+YTN +I++
Sbjct: 121 GNGDVLEPEEGVMAIGSGGNYALAAAKALAETEYSAEEIARRAMKIASEICIYTNDSIIV 180
Query: 183 ETLK 186
E ++
Sbjct: 181 EKIE 184
>gi|91974896|ref|YP_567555.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
palustris BisB5]
gi|91681352|gb|ABE37654.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodopseudomonas palustris BisB5]
Length = 193
Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 148/172 (86%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTILTVRK G VVI GDGQVS+GQTV+KANA+KVR+LGKG++I GFAG++ADAFTL E
Sbjct: 20 HGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAFTLFE 79
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVLEPE G
Sbjct: 80 RLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEYG 139
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VMAIGSGG+YAL+AARAL T AE I RKA+ IAADICVYTN N+ LETL
Sbjct: 140 VMAIGSGGNYALAAARALADTDQDAETIVRKALDIAADICVYTNRNLTLETL 191
>gi|58584979|ref|YP_198552.1| ATP-dependent protease peptidase subunit [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|75497643|sp|Q5GRR4|HSLV_WOLTR RecName: Full=ATP-dependent protease subunit HslV
gi|58419295|gb|AAW71310.1| ATP-dependent protease HslV, peptidase subunit [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 176
Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 152/175 (86%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M+ TTIL++RKD V++ GDGQVSLG TV+K+ A+KVRRL ++IAGFAG++ADAFTL
Sbjct: 1 MYGTTILSIRKDKSVIVIGDGQVSLGHTVIKSGAKKVRRLSSDSVIAGFAGATADAFTLF 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KL+++P QL+R+ VELAKDWRMDKYLR LEAM+++ADK+I+LVITG GDVLEPE+
Sbjct: 61 ERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGDVLEPED 120
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG++ALSAA+AL+ + S EEIA+KAM IAADICVYTNHN+V+E ++
Sbjct: 121 GIAAIGSGGNFALSAAKALIDIKGISIEEIAKKAMKIAADICVYTNHNVVVEKIE 175
>gi|220925309|ref|YP_002500611.1| ATP-dependent protease peptidase subunit [Methylobacterium nodulans
ORS 2060]
gi|219949916|gb|ACL60308.1| 20S proteasome A and B subunits [Methylobacterium nodulans ORS
2060]
Length = 176
Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 119/174 (68%), Positives = 146/174 (83%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++ADAFTL
Sbjct: 1 MHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGAVIGGFAGATADAFTLF 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+AD+ ++L+++G GDVLEPE
Sbjct: 61 ERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADREVSLMLSGSGDVLEPEG 120
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+MAIGSGG+YAL+AARAL AE I R++++IAA+ICVYTN N+V+E+L+
Sbjct: 121 GIMAIGSGGNYALAAARALEDQDLDAESIVRRSLAIAAEICVYTNGNLVIESLE 174
>gi|86747530|ref|YP_484026.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
palustris HaA2]
gi|86570558|gb|ABD05115.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodopseudomonas palustris HaA2]
Length = 187
Score = 254 bits (649), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 148/172 (86%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTILTVRK G VVI GDGQVS+GQTV+KANA+KVR+LGKG++I GFAG++ADAFTL E
Sbjct: 14 HGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAFTLFE 73
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVLEPE G
Sbjct: 74 RLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEYG 133
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VMAIGSGG+YAL+AARAL T AE I RKA+ IAADICVYTN N+ LETL
Sbjct: 134 VMAIGSGGNYALAAARALADTDQDAETIVRKALDIAADICVYTNRNLTLETL 185
>gi|170738606|ref|YP_001767261.1| ATP-dependent protease peptidase subunit [Methylobacterium sp.
4-46]
gi|168192880|gb|ACA14827.1| 20S proteasome A and B subunits [Methylobacterium sp. 4-46]
Length = 176
Score = 254 bits (648), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 120/174 (68%), Positives = 145/174 (83%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++ADAFTL
Sbjct: 1 MHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGAVIGGFAGATADAFTLF 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+AD+ + L+++G GDVLEPE
Sbjct: 61 ERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADREVGLLLSGSGDVLEPEG 120
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
GVMAIGSGG+YAL+AARAL AE I R++++IAA+ICVYTN N+V+E+L+
Sbjct: 121 GVMAIGSGGNYALAAARALEDQDLDAEAIVRRSLAIAAEICVYTNGNLVIESLE 174
>gi|213018560|ref|ZP_03334368.1| heat shock protein HslV [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995511|gb|EEB56151.1| heat shock protein HslV [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 176
Score = 253 bits (647), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 152/175 (86%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M+ TTIL++R+D VV+ GDGQVSLG TV+K+ ARKVRRL ++IAGFAG++ADAFTL
Sbjct: 1 MYGTTILSIRRDKNVVVIGDGQVSLGHTVIKSGARKVRRLSGDSVIAGFAGATADAFTLF 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KL+++P QL+R+ VELAKDWRMDKYLR LEAM+++ADK+I+LVITG GDVLEPE+
Sbjct: 61 ERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGDVLEPED 120
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG++ALSAA+AL+ + S EEIA+KAM IAADICVYTNHN+++E ++
Sbjct: 121 GIAAIGSGGNFALSAAKALIDVEGISIEEIAKKAMKIAADICVYTNHNLIIEKIE 175
>gi|83594928|ref|YP_428680.1| ATP-dependent protease peptidase subunit [Rhodospirillum rubrum
ATCC 11170]
gi|83577842|gb|ABC24393.1| 20S proteasome, A and B subunits [Rhodospirillum rubrum ATCC 11170]
Length = 187
Score = 253 bits (647), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 147/176 (83%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
++ H TTIL+VRK+G VVIAGDGQV+ G TVMKANARKVR L G++IAGFAG++ADAF
Sbjct: 12 SIVWHGTTILSVRKNGKVVIAGDGQVTFGNTVMKANARKVRPLAGGSVIAGFAGATADAF 71
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ERLE KLEQYP QL R+ VE+AKDWR D+YLR LEAM+ +ADK ++LV+TG GDVLE
Sbjct: 72 TLFERLETKLEQYPGQLTRACVEMAKDWRTDRYLRRLEAMMAVADKGVSLVLTGTGDVLE 131
Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
PE+G++ IGSGG +AL+AARAL+S E IAR++++IAADIC+YTNHN+ +E L
Sbjct: 132 PEDGLIGIGSGGPFALAAARALVSEDLDPEVIARRSLAIAADICIYTNHNLTVEVL 187
>gi|114328900|ref|YP_746057.1| ATP-dependent protease peptidase subunit [Granulibacter
bethesdensis CGDNIH1]
gi|114317074|gb|ABI63134.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
[Granulibacter bethesdensis CGDNIH1]
Length = 212
Score = 253 bits (647), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 122/181 (67%), Positives = 150/181 (82%), Gaps = 2/181 (1%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSSA 66
H V H TTIL VR+ V +AGDGQVSLGQTV+K NARKVRR+G G ++AGFAG++A
Sbjct: 28 HDPVGWHGTTILCVRRGDTVTMAGDGQVSLGQTVVKGNARKVRRIGAGGQVLAGFAGATA 87
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLE++PNQL R+ VELAKDWR D+YLR LEAM+ +AD+ + +TG GD
Sbjct: 88 DAFTLLERLEAKLERFPNQLERACVELAKDWRTDRYLRRLEAMMAVADQNRSFTLTGNGD 147
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE+G++AIGSGG+YALSAARALM+ + AEEIAR+AM IAADICVYTN N+++ETL
Sbjct: 148 VLEPEDGIIAIGSGGNYALSAARALMTVEGLEAEEIARRAMRIAADICVYTNGNVIVETL 207
Query: 186 K 186
+
Sbjct: 208 R 208
>gi|254295472|ref|YP_003061495.1| ATP-dependent protease peptidase subunit [Hirschia baltica ATCC
49814]
gi|254044003|gb|ACT60798.1| 20S proteasome A and B subunits [Hirschia baltica ATCC 49814]
Length = 185
Score = 253 bits (646), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 148/175 (84%), Gaps = 1/175 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSSADAFTLL 72
H+TTIL VRK G VVI GDGQVS+G TVMK NARKVRRLG+G NIIAGFAG++ADAFTL
Sbjct: 11 HSTTILAVRKPGRVVIIGDGQVSMGNTVMKGNARKVRRLGEGGNIIAGFAGATADAFTLF 70
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++P QL R++VELAKDWR DKYL+ LEA++++ADK TLV+TGMGDVLEPE
Sbjct: 71 ERLELKLERFPGQLQRAAVELAKDWRTDKYLQKLEALLIVADKHTTLVLTGMGDVLEPEY 130
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
V+AIGSGG+YALSAARA+ + AE + RKAM +AA+ICVYTN+N V+E+L V
Sbjct: 131 DVVAIGSGGNYALSAARAIFDYEEDAEVLGRKAMEVAAEICVYTNNNFVVESLDV 185
>gi|192288741|ref|YP_001989346.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
palustris TIE-1]
gi|192282490|gb|ACE98870.1| 20S proteasome A and B subunits [Rhodopseudomonas palustris TIE-1]
Length = 189
Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 148/172 (86%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTILTVRK G VVI GDGQVS+GQTV+KANA+KVR+LGKG++I GFAG++ADAFTL E
Sbjct: 16 HGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAFTLFE 75
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVLEPE G
Sbjct: 76 RLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEAG 135
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VMAIGSGG+YAL+AARAL T AE I RKA+ IAA+ICVYTN N+ LETL
Sbjct: 136 VMAIGSGGNYALAAARALADTDQDAETIVRKALGIAAEICVYTNGNLTLETL 187
>gi|148557270|ref|YP_001264852.1| ATP-dependent protease peptidase subunit [Sphingomonas wittichii
RW1]
gi|189036242|sp|A5VEJ8|HSLV_SPHWW RecName: Full=ATP-dependent protease subunit HslV
gi|148502460|gb|ABQ70714.1| 20S proteasome, A and B subunits [Sphingomonas wittichii RW1]
Length = 183
Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/174 (67%), Positives = 148/174 (85%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K H TTIL+VRK G VV+ GDGQVS+G TVMK NARKVR+LG G++I GFAG++ADAFTL
Sbjct: 6 KWHGTTILSVRKGGKVVVIGDGQVSMGNTVMKPNARKVRKLGDGSVIGGFAGATADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+RLE+KLEQ+ QLLR++VELAKDWR DKYLRNLEAM+++AD+ +TL++TG GDVLEP
Sbjct: 66 FDRLERKLEQHGGQLLRAAVELAKDWRTDKYLRNLEAMMIVADREVTLILTGNGDVLEPV 125
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV AIGSGG++ALSAARAL+ + AE I RKAM+IAAD+CV+TN ++ +ETL
Sbjct: 126 GGVAAIGSGGNFALSAARALVDYEADAETICRKAMAIAADLCVFTNDSLTIETL 179
>gi|307292833|ref|ZP_07572679.1| 20S proteasome A and B subunits [Sphingobium chlorophenolicum L-1]
gi|306880899|gb|EFN12115.1| 20S proteasome A and B subunits [Sphingobium chlorophenolicum L-1]
Length = 180
Score = 251 bits (642), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 149/173 (86%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI++VRK+G V++AGDGQVS+GQTVMK NARKVRRL G++I GFAG++ADAFTL E
Sbjct: 5 HGTTIMSVRKNGKVIVAGDGQVSMGQTVMKPNARKVRRLHDGSVIGGFAGATADAFTLFE 64
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLE++ QL+R++VELAKDWR DKYLRNLEAM+++ADK +TL++TG GDVLEP G
Sbjct: 65 RLEAKLERHNGQLMRAAVELAKDWRTDKYLRNLEAMMIVADKEVTLILTGNGDVLEPIGG 124
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
V AIGSGG++AL+AARAL+ + AE +ARKAM++AADICVYTN +V+E L+
Sbjct: 125 VAAIGSGGNFALAAARALVEYEEDAETLARKAMAVAADICVYTNDQLVVEELE 177
>gi|148260412|ref|YP_001234539.1| ATP-dependent protease peptidase subunit [Acidiphilium cryptum
JF-5]
gi|189043927|sp|A5FYD8|HSLV_ACICJ RecName: Full=ATP-dependent protease subunit HslV
gi|146402093|gb|ABQ30620.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Acidiphilium cryptum JF-5]
Length = 182
Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/176 (67%), Positives = 147/176 (83%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
V H TTIL VR+D V +AGDGQVSLG TV+K NARKVRR+G GN++AGFAG++ADAFT
Sbjct: 7 VGWHGTTILCVRRDEQVAMAGDGQVSLGNTVVKGNARKVRRIGNGNVVAGFAGATADAFT 66
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LLERLE KLE++PNQL R+ VELAKDWR D+YLR LEAM+ +AD+T +TG GDVLEP
Sbjct: 67 LLERLEAKLERFPNQLERACVELAKDWRTDRYLRRLEAMMAVADRTHAYTLTGNGDVLEP 126
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
E+G++AIGSGG+YAL+AARAL+S +AE+IAR+AM IA DICVYTNH++ +E L
Sbjct: 127 EDGIIAIGSGGNYALAAARALISVDGMTAEDIARRAMKIAGDICVYTNHHVTVEIL 182
>gi|326403604|ref|YP_004283686.1| ATP-dependent protease subunit HslV [Acidiphilium multivorum
AIU301]
gi|325050466|dbj|BAJ80804.1| ATP-dependent protease subunit HslV [Acidiphilium multivorum
AIU301]
Length = 183
Score = 251 bits (641), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 119/176 (67%), Positives = 147/176 (83%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
V H TTIL VR+D V +AGDGQVSLG TV+K NARKVRR+G GN++AGFAG++ADAFT
Sbjct: 8 VGWHGTTILCVRRDEQVAMAGDGQVSLGNTVVKGNARKVRRIGNGNVVAGFAGATADAFT 67
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LLERLE KLE++PNQL R+ VELAKDWR D+YLR LEAM+ +AD+T +TG GDVLEP
Sbjct: 68 LLERLEAKLERFPNQLERACVELAKDWRTDRYLRRLEAMMAVADRTHAYTLTGNGDVLEP 127
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
E+G++AIGSGG+YAL+AARAL+S +AE+IAR+AM IA DICVYTNH++ +E L
Sbjct: 128 EDGIIAIGSGGNYALAAARALISVDGMTAEDIARRAMKIAGDICVYTNHHVTVEIL 183
>gi|90420976|ref|ZP_01228880.1| heat shock protein HslV [Aurantimonas manganoxydans SI85-9A1]
gi|90334754|gb|EAS48530.1| heat shock protein HslV [Aurantimonas manganoxydans SI85-9A1]
Length = 194
Score = 251 bits (641), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 126/181 (69%), Positives = 155/181 (85%), Gaps = 1/181 (0%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGS 64
+ H ++ TTI+TVRK G VVIAGDGQVSLG TVMK NARKVRR+GK G++IAGFAG+
Sbjct: 10 ENHDPATIYGTTIVTVRKGGKVVIAGDGQVSLGNTVMKGNARKVRRIGKKGDVIAGFAGA 69
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
+ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+++AD+ +TL +TG
Sbjct: 70 TADAFTLLERLEAKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMIVADRQVTLTLTGN 129
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
GDVLEPE+GV+AIGSGG+YAL+AARAL T AEEIAR+AM IA +IC+YTN N+V+E+
Sbjct: 130 GDVLEPEHGVIAIGSGGNYALAAARALADTDYDAEEIARRAMKIAGEICIYTNDNVVVES 189
Query: 185 L 185
L
Sbjct: 190 L 190
>gi|221641022|ref|YP_002527284.1| ATP-dependent protease peptidase subunit [Rhodobacter sphaeroides
KD131]
gi|254802421|sp|B9KRG9|HSLV_RHOSK RecName: Full=ATP-dependent protease subunit HslV
gi|221161803|gb|ACM02783.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodobacter sphaeroides KD131]
Length = 185
Score = 251 bits (640), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 123/174 (70%), Positives = 144/174 (82%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTIL VR+ G VV+AGDGQVSLGQTV+K ARKVRRL G ++AGFAGS+ADAFTL
Sbjct: 10 HGTTILAVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHEVVAGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLEKKLE P QL R+ VELAKDWRMDKYLRNLEAM+++ D LV+TG GDVLEPE
Sbjct: 70 LERLEKKLEAAPGQLARACVELAKDWRMDKYLRNLEAMLIVTDGETLLVLTGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG++AL+AAR LM+T+ AEEIARKAM+IAADICVYTN N+ +E +
Sbjct: 130 HDVTAIGSGGNFALAAARGLMATELPAEEIARKAMAIAADICVYTNGNLTVERI 183
>gi|294011679|ref|YP_003545139.1| ATP-dependent HslUV protease peptidase subunit HslV [Sphingobium
japonicum UT26S]
gi|292675009|dbj|BAI96527.1| ATP-dependent HslUV protease peptidase subunit HslV [Sphingobium
japonicum UT26S]
Length = 188
Score = 250 bits (639), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/173 (67%), Positives = 148/173 (85%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI++VRK+G V++AGDGQVS+GQTVMK NARKVRRL G++I GFAG++ADAFTL E
Sbjct: 13 HGTTIMSVRKNGKVIVAGDGQVSMGQTVMKPNARKVRRLHDGSVIGGFAGATADAFTLFE 72
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLE++ QL+R++VELAKDWR DKYLRNLEAM+++AD+ +TL++TG GDVLEP G
Sbjct: 73 RLEAKLERHNGQLMRAAVELAKDWRTDKYLRNLEAMMIVADREVTLILTGNGDVLEPVGG 132
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
V AIGSGG++AL+AARAL+ + AE +ARKAM +AADICVYTN +V+E L+
Sbjct: 133 VAAIGSGGNFALAAARALVEYEEDAETLARKAMKVAADICVYTNDQLVVEELE 185
>gi|27375760|ref|NP_767289.1| ATP-dependent protease peptidase subunit [Bradyrhizobium japonicum
USDA 110]
gi|47605692|sp|Q89WM9|HSLV_BRAJA RecName: Full=ATP-dependent protease subunit HslV
gi|27348898|dbj|BAC45914.1| ATP-dependent protease [Bradyrhizobium japonicum USDA 110]
Length = 186
Score = 250 bits (638), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 122/175 (69%), Positives = 150/175 (85%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTILTVRK G VVI GDGQVS+GQTV+K+NA+KVR+LG+G++I GFAG++ADAFTL E
Sbjct: 12 HGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNAKKVRKLGRGDVIGGFAGATADAFTLFE 71
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVLEPE G
Sbjct: 72 RLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEAG 131
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
VMAIGSGG+YAL+AARAL+ T AE I R+++ IAADICVYTN N+ +E+L G
Sbjct: 132 VMAIGSGGNYALAAARALLDTDKDAETIVRRSLDIAADICVYTNRNVTIESLATG 186
>gi|126732957|ref|ZP_01748718.1| 20S proteasome, A and B subunits [Sagittula stellata E-37]
gi|126706574|gb|EBA05650.1| 20S proteasome, A and B subunits [Sagittula stellata E-37]
Length = 183
Score = 249 bits (637), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 122/174 (70%), Positives = 144/174 (82%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI+ VRKDG VV+AGDGQVSLGQTV+K ARKVRRL G +++AGFAGS+ADAFTL
Sbjct: 9 HGTTIIGVRKDGKVVVAGDGQVSLGQTVIKGTARKVRRLSPGGKDVVAGFAGSTADAFTL 68
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLEKKLE+ P QL R+SV+LAKDWR DKYL LEAM+++ D T VITG GDVLEPE
Sbjct: 69 LERLEKKLEETPGQLQRASVDLAKDWRTDKYLSKLEAMLIVTDGTDLFVITGAGDVLEPE 128
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG+YAL+AARA+M T AE +AR+AM+IAADICVYTN N+ +ETL
Sbjct: 129 HDVAAIGSGGNYALAAARAMMDTDKDAETVAREAMAIAADICVYTNGNLTVETL 182
>gi|77462069|ref|YP_351573.1| ATP-dependent protease peptidase subunit [Rhodobacter sphaeroides
2.4.1]
gi|332559996|ref|ZP_08414318.1| ATP-dependent protease subunit HslV [Rhodobacter sphaeroides WS8N]
gi|123593093|sp|Q3J6B2|HSLV_RHOS4 RecName: Full=ATP-dependent protease subunit HslV
gi|77386487|gb|ABA77672.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodobacter sphaeroides 2.4.1]
gi|332277708|gb|EGJ23023.1| ATP-dependent protease subunit HslV [Rhodobacter sphaeroides WS8N]
Length = 185
Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/174 (70%), Positives = 143/174 (82%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
H TTIL VR+ G VV+AGDGQVSLGQTV+K ARKVRRL G ++AGFAGS+ADAFTL
Sbjct: 10 HGTTILAVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHEVVAGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLEKKLE P QL R+ VELAKDWRMDKYLRNLEAM+++ D LV+TG GDVLEPE
Sbjct: 70 LERLEKKLEAAPGQLARACVELAKDWRMDKYLRNLEAMLIVTDGETLLVLTGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG++AL+AAR LM+T AEEIARKAM+IAADICVYTN N+ +E +
Sbjct: 130 HDVTAIGSGGNFALAAARGLMATDLPAEEIARKAMAIAADICVYTNGNLTVERI 183
>gi|126460958|ref|YP_001042072.1| ATP-dependent protease peptidase subunit [Rhodobacter sphaeroides
ATCC 17029]
gi|189036233|sp|A3PG34|HSLV_RHOS1 RecName: Full=ATP-dependent protease subunit HslV
gi|126102622|gb|ABN75300.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodobacter sphaeroides ATCC 17029]
Length = 185
Score = 248 bits (633), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 122/174 (70%), Positives = 143/174 (82%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
H TTIL VR+ G VV+AGDGQVSLGQTV+K ARKVRRL G ++AGFAGS+ADAFTL
Sbjct: 10 HGTTILAVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHEVVAGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLEKKLE P QL R+ V+LAKDWRMDKYLRNLEAM+++ D LV+TG GDVLEPE
Sbjct: 70 LERLEKKLEAAPGQLARACVQLAKDWRMDKYLRNLEAMLIVTDGETLLVLTGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG++AL+AAR LM+T AEEIARKAM+IAADICVYTN N+ +E +
Sbjct: 130 HDVTAIGSGGNFALAAARGLMATDLPAEEIARKAMAIAADICVYTNGNLTVERI 183
>gi|163797094|ref|ZP_02191049.1| 20S proteasome, A and B subunits [alpha proteobacterium BAL199]
gi|159177610|gb|EDP62163.1| 20S proteasome, A and B subunits [alpha proteobacterium BAL199]
Length = 186
Score = 248 bits (632), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 148/181 (81%), Gaps = 1/181 (0%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D +++ H TTIL+VRKDG VV+AGDGQV+ G TVMKA ARKVRRL G +IAGFAG++
Sbjct: 6 DNRHSMTWHGTTILSVRKDGRVVVAGDGQVTFGNTVMKAGARKVRRLAGGQVIAGFAGAT 65
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTL ERLE KLEQ+P+QL+R+ VELAKDWR D+YLR LEAM+ + D ++L+++G G
Sbjct: 66 ADAFTLFERLEAKLEQHPDQLMRACVELAKDWRTDRYLRRLEAMMAVVDPDVSLILSGTG 125
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLET 184
DVLEPE+G++ IGSGG++ALSAARAL + AE IAR++M+IAA+IC+YTN + LE+
Sbjct: 126 DVLEPEDGLIGIGSGGAFALSAARALADRPDMDAEAIARRSMAIAAEICIYTNDRVTLES 185
Query: 185 L 185
L
Sbjct: 186 L 186
>gi|103487079|ref|YP_616640.1| ATP-dependent protease peptidase subunit [Sphingopyxis alaskensis
RB2256]
gi|98977156|gb|ABF53307.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Sphingopyxis alaskensis RB2256]
Length = 188
Score = 248 bits (632), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 116/178 (65%), Positives = 146/178 (82%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
A H TTIL+ R +G VV+ GDGQVS+GQTVMK NARKVRRL G++I GFAG++ADAF
Sbjct: 9 AAPWHGTTILSARNEGKVVVIGDGQVSMGQTVMKPNARKVRRLHDGSVIGGFAGATADAF 68
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ERLE KLE++ QLLR++VELAKDWR DKYLRNLEAM+++AD+ +TLVITG GDVLE
Sbjct: 69 TLFERLEAKLERHNGQLLRAAVELAKDWRTDKYLRNLEAMMIVADREVTLVITGNGDVLE 128
Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
P G++AIGSGG++ALSAARAL + E +A+KAM++AA+ICVYTN LET+++
Sbjct: 129 PTGGIVAIGSGGNFALSAARALADYEKDPEVLAKKAMAVAAEICVYTNDQFTLETIEI 186
>gi|315497793|ref|YP_004086597.1| 20S proteasome a and b subunits [Asticcacaulis excentricus CB 48]
gi|315415805|gb|ADU12446.1| 20S proteasome A and B subunits [Asticcacaulis excentricus CB 48]
Length = 183
Score = 247 bits (631), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 120/183 (65%), Positives = 145/183 (79%), Gaps = 1/183 (0%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M DK++ H TTI+ VRK+G VIAGDGQVS+G T++K A+KVR L G +I GFAG
Sbjct: 1 MTDKNFP-NWHGTTIVAVRKNGKTVIAGDGQVSMGPTIVKGGAKKVRTLAGGKVIVGFAG 59
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTLLERLE KLE YP+QL R+ V+LAKDWR D+YLR LEAM+L+ DK L ITG
Sbjct: 60 ATADAFTLLERLEAKLELYPDQLARACVDLAKDWRTDRYLRRLEAMLLVGDKNHILTITG 119
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
+GDVLEPE+GV AIGSGG+YALSAARAL+ + AE IARKAM IA DICVYTNH++ LE
Sbjct: 120 VGDVLEPEDGVAAIGSGGTYALSAARALLEYEPDAEIIARKAMQIAGDICVYTNHSVTLE 179
Query: 184 TLK 186
L+
Sbjct: 180 KLE 182
>gi|146278981|ref|YP_001169140.1| ATP-dependent protease peptidase subunit [Rhodobacter sphaeroides
ATCC 17025]
gi|189036234|sp|A4WWS1|HSLV_RHOS5 RecName: Full=ATP-dependent protease subunit HslV
gi|145557222|gb|ABP71835.1| 20S proteasome, A and B subunits [Rhodobacter sphaeroides ATCC
17025]
Length = 185
Score = 246 bits (628), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/174 (70%), Positives = 142/174 (81%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
H TTIL VR+ G VV+AGDGQVSLGQTV+K ARKVRRL G ++AGFAGS+ADAFTL
Sbjct: 10 HGTTILAVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHEVVAGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLEKKLE QL R+ VELAKDWRMDKYLRNLEAM+++ D LVITG GDVLEPE
Sbjct: 70 LERLEKKLEAASGQLARACVELAKDWRMDKYLRNLEAMLIVTDGETLLVITGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG++AL+AAR LM+T AEE+ARKAM+IAADICVYTN N+ +E +
Sbjct: 130 HDVTAIGSGGNFALAAARGLMATDLPAEEVARKAMAIAADICVYTNGNLTVERI 183
>gi|330993963|ref|ZP_08317893.1| ATP-dependent protease subunit HslV [Gluconacetobacter sp. SXCC-1]
gi|329758909|gb|EGG75423.1| ATP-dependent protease subunit HslV [Gluconacetobacter sp. SXCC-1]
Length = 219
Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/181 (65%), Positives = 146/181 (80%), Gaps = 2/181 (1%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSS 65
H V H TTIL VR+ G V +AGDGQV+LG TV+K NARKVRR+G G I+AGFAG++
Sbjct: 30 PHDPVGWHGTTILCVRRGGQVAMAGDGQVTLGATVIKGNARKVRRIGPTGQILAGFAGAT 89
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD + +TG G
Sbjct: 90 ADAFTLLERLENKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADAERSFTLTGNG 149
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLET 184
DVLEPE+G++AIGSGG+YALSAARAL+ SA +IAR++M IA DICVYTNH++++ET
Sbjct: 150 DVLEPEDGIIAIGSGGNYALSAARALLGIDGLSAVDIARRSMKIAGDICVYTNHSVIVET 209
Query: 185 L 185
L
Sbjct: 210 L 210
>gi|126734391|ref|ZP_01750138.1| 20S proteasome, A and B subunits [Roseobacter sp. CCS2]
gi|126717257|gb|EBA14121.1| 20S proteasome, A and B subunits [Roseobacter sp. CCS2]
Length = 185
Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 143/175 (81%), Gaps = 2/175 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI+ VRK G VVIAGDGQVSLGQTV+K ARKVRRL G ++I GFAGS+ADAFTL
Sbjct: 10 HGTTIIGVRKGGQVVIAGDGQVSLGQTVIKGTARKVRRLSPGGQDVICGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLEKKLE P QL R+S+ELAKDWR DKYL+ LEAM++++D + VITG GDVLEPE
Sbjct: 70 LERLEKKLEATPGQLARASIELAKDWRTDKYLQKLEAMLIVSDGSELFVITGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ + AIGSGG+YAL+A RALM T+ AE IAR+AM+IAADICVYTN N+ +E +K
Sbjct: 130 HDIAAIGSGGNYALAAGRALMDTKKDAETIAREAMAIAADICVYTNGNLTVEAIK 184
>gi|162149055|ref|YP_001603516.1| ATP-dependent protease peptidase subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|161787632|emb|CAP57228.1| ATP-dependent protease hslV [Gluconacetobacter diazotrophicus PAl
5]
Length = 211
Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 147/185 (79%), Gaps = 2/185 (1%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGF 61
+ +H + H TTIL VR+ V +AGDGQV+LG TV+K NARKVRR+G N I+AGF
Sbjct: 16 IHASQHDPIGWHGTTILCVRRGAQVAMAGDGQVTLGATVIKGNARKVRRIGPSNSILAGF 75
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AG++ADAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD+ + +
Sbjct: 76 AGATADAFTLLERLEAKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADQERSFTL 135
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI 180
TG GDVLEPE+G++AIGSGG+YALSAARAL SA EIAR+AM IA +ICVYTNH++
Sbjct: 136 TGNGDVLEPEDGIIAIGSGGNYALSAARALADIDGLSAAEIARRAMRIAGEICVYTNHSV 195
Query: 181 VLETL 185
+LETL
Sbjct: 196 ILETL 200
>gi|209966552|ref|YP_002299467.1| ATP-dependent protease peptidase subunit [Rhodospirillum centenum
SW]
gi|209960018|gb|ACJ00655.1| ATP-dependent protease HslV, putative [Rhodospirillum centenum SW]
Length = 187
Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 145/176 (82%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
V+ H TTIL+VRKDG VVIAGDGQVS+GQT++K+NARKVRRL G ++AGFAG++ADA
Sbjct: 12 VQWHGTTILSVRKDGQVVIAGDGQVSMGQTIIKSNARKVRRLAGGGVMAGFAGATADAMA 71
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ERLE KLEQ+P QL R+ VE+AKDWR D+YLR LEAM+ +AD+ ++LVITG GDVLEP
Sbjct: 72 LFERLEAKLEQHPGQLARACVEMAKDWRTDRYLRRLEAMMAVADRDVSLVITGTGDVLEP 131
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
E+G++ IGSGG++ALSAARAL+ AE IARKAM IA +ICVYTN +I LE +
Sbjct: 132 EDGLIGIGSGGAFALSAARALVDIPGMDAEAIARKAMRIAGEICVYTNASITLEKI 187
>gi|89067404|ref|ZP_01154917.1| ATP-dependent protease peptidase subunit [Oceanicola granulosus
HTCC2516]
gi|89046973|gb|EAR53027.1| ATP-dependent protease peptidase subunit [Oceanicola granulosus
HTCC2516]
Length = 186
Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/184 (67%), Positives = 144/184 (78%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D + H TTI+ VRK G VVI+GDGQVSLG TV+K ARKVRRL G ++IAGF
Sbjct: 1 MADSQFP-GWHGTTIIGVRKGGEVVISGDGQVSLGDTVIKGTARKVRRLSPGGYDVIAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLEKKLE P QL R+SVELAKDWR DKYL+ LEAM++++D VI
Sbjct: 60 AGSTADAFTLLERLEKKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGKDMFVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG+YAL+A RALM T++ AEEIAR+AM IAADICVYTN N
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNYALAAGRALMDTEHDAEEIARRAMQIAADICVYTNGNTT 179
Query: 182 LETL 185
+E L
Sbjct: 180 VEKL 183
>gi|209545198|ref|YP_002277427.1| ATP-dependent protease peptidase subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532875|gb|ACI52812.1| 20S proteasome A and B subunits [Gluconacetobacter diazotrophicus
PAl 5]
Length = 199
Score = 245 bits (626), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 147/185 (79%), Gaps = 2/185 (1%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGF 61
+ +H + H TTIL VR+ V +AGDGQV+LG TV+K NARKVRR+G N I+AGF
Sbjct: 4 IHASQHDPIGWHGTTILCVRRGAQVAMAGDGQVTLGATVIKGNARKVRRIGPSNSILAGF 63
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AG++ADAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD+ + +
Sbjct: 64 AGATADAFTLLERLEAKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADQERSFTL 123
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI 180
TG GDVLEPE+G++AIGSGG+YALSAARAL SA EIAR+AM IA +ICVYTNH++
Sbjct: 124 TGNGDVLEPEDGIIAIGSGGNYALSAARALADIDGLSAAEIARRAMRIAGEICVYTNHSV 183
Query: 181 VLETL 185
+LETL
Sbjct: 184 ILETL 188
>gi|258542119|ref|YP_003187552.1| ATP-dependent protease peptidase subunit [Acetobacter pasteurianus
IFO 3283-01]
gi|256633197|dbj|BAH99172.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-01]
gi|256636256|dbj|BAI02225.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-03]
gi|256639309|dbj|BAI05271.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-07]
gi|256642365|dbj|BAI08320.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-22]
gi|256645420|dbj|BAI11368.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-26]
gi|256648473|dbj|BAI14414.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-32]
gi|256651526|dbj|BAI17460.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654517|dbj|BAI20444.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-12]
Length = 199
Score = 245 bits (625), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 147/185 (79%), Gaps = 2/185 (1%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSA 66
H V H TTIL VR+ V +AGDGQV+LG TV+K NARKVRR+G + NI+AGFAG++A
Sbjct: 11 HDPVGWHGTTILCVRRGAEVAMAGDGQVTLGSTVVKGNARKVRRIGPQDNILAGFAGATA 70
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD + +TG GD
Sbjct: 71 DAFTLLERLEAKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADAEHSFTLTGNGD 130
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE+G++AIGSGG+YALSAARAL++ AEEI R++M IA DICVYTNH++ +ETL
Sbjct: 131 VLEPEDGIIAIGSGGNYALSAARALLTVDGLGAEEIVRRSMKIAGDICVYTNHSVRVETL 190
Query: 186 KVGDE 190
K +
Sbjct: 191 KAASD 195
>gi|296533580|ref|ZP_06896148.1| ATP-dependent protease HslVU [Roseomonas cervicalis ATCC 49957]
gi|296266088|gb|EFH12145.1| ATP-dependent protease HslVU [Roseomonas cervicalis ATCC 49957]
Length = 196
Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H + H TTIL VRKDG V +AGDGQVSLGQTV+K NARKVRR+ G ++ GFAG++AD
Sbjct: 18 HDPIGWHGTTILCVRKDGQVAMAGDGQVSLGQTVVKGNARKVRRIANGKVLTGFAGATAD 77
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTLLERLE KLE++P+QL R++VELAKDWR D+YLR LEA++ +ADK +L+ITG GDV
Sbjct: 78 AFTLLERLEAKLERFPDQLERAAVELAKDWRTDRYLRRLEALLAVADKDRSLLITGNGDV 137
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE+ ++ IGSGG++AL+AARAL+ SAEEIA+KAM IAA ICVYTN VLETL
Sbjct: 138 LEPEDQIIGIGSGGNFALAAARALIDVDGLSAEEIAKKAMGIAAGICVYTNGRYVLETL 196
>gi|329114129|ref|ZP_08242891.1| ATP-dependent protease subunit HslV [Acetobacter pomorum DM001]
gi|326696205|gb|EGE47884.1| ATP-dependent protease subunit HslV [Acetobacter pomorum DM001]
Length = 199
Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 147/185 (79%), Gaps = 2/185 (1%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSA 66
H V H TTIL VR+ V +AGDGQV+LG TV+K NARKVRR+G + NI+AGFAG++A
Sbjct: 11 HDPVGWHGTTILCVRRGAEVAMAGDGQVTLGSTVVKGNARKVRRIGPQDNILAGFAGATA 70
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD + +TG GD
Sbjct: 71 DAFTLLERLEAKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADAEHSFTLTGNGD 130
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE+G++AIGSGG+YALSAARAL++ AEEI R++M IA DICVYTNH++ +ETL
Sbjct: 131 VLEPEDGIIAIGSGGNYALSAARALLTVDGLGAEEIVRRSMKIAGDICVYTNHSVRVETL 190
Query: 186 KVGDE 190
K +
Sbjct: 191 KAASD 195
>gi|254439232|ref|ZP_05052726.1| peptidase, T1 family [Octadecabacter antarcticus 307]
gi|198254678|gb|EDY78992.1| peptidase, T1 family [Octadecabacter antarcticus 307]
Length = 186
Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/175 (69%), Positives = 142/175 (81%), Gaps = 2/175 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ VRK G VVIAGDGQVS+GQTVMK ARKVRRL G ++I GFAGS+ADAFTL
Sbjct: 10 HGTTIIGVRKGGEVVIAGDGQVSIGQTVMKGTARKVRRLTAGGNDVICGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLEKKLE P QL R+SVELAKDWR DKYL+ LEAM++++D VITG GDVLEPE
Sbjct: 70 LERLEKKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGKDLFVITGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
V AIGSGG++ALSA RALM +AEEIAR+AM+IA+DICVYTN N+ +ET+K
Sbjct: 130 YDVTAIGSGGNFALSAGRALMDLDFTAEEIARRAMAIASDICVYTNGNLTVETIK 184
>gi|114571526|ref|YP_758206.1| ATP-dependent protease peptidase subunit [Maricaulis maris MCS10]
gi|114341988|gb|ABI67268.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Maricaulis maris MCS10]
Length = 189
Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/173 (66%), Positives = 139/173 (80%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TTI+ VRK G +V+AGDGQVS+G TVMK NARKVRRL G++IAGFAG++ADAF L E
Sbjct: 16 RGTTIIAVRKGGRLVVAGDGQVSIGPTVMKGNARKVRRLAGGDVIAGFAGATADAFALFE 75
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL R+ VELAKDWR D+YLR LEAM+++ D T ++TG GDVLEPE+G
Sbjct: 76 RLEAKLEQYPKQLARACVELAKDWRTDRYLRRLEAMLIVGDSNETFLLTGAGDVLEPEDG 135
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
V+A+GSGG+YALSAARA+ + E IARKAM IAA ICVYTN N+ +ETL+
Sbjct: 136 VVAVGSGGNYALSAARAIFDYEADPEVIARKAMEIAARICVYTNENLTVETLE 188
>gi|83944943|ref|ZP_00957309.1| ATP-dependent protease peptidase subunit [Oceanicaulis alexandrii
HTCC2633]
gi|83851725|gb|EAP89580.1| ATP-dependent protease peptidase subunit [Oceanicaulis alexandrii
HTCC2633]
Length = 184
Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/172 (66%), Positives = 142/172 (82%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TTIL+VRK+G VV+AGDGQVS+G TV+KA ARKVR + G +I GFAG++ADAF L E
Sbjct: 12 RGTTILSVRKNGKVVLAGDGQVSIGDTVVKATARKVRPIASGKVITGFAGATADAFALFE 71
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP+QL R+ VELAKDWR D+Y+R LEAM+++ADK+ T +TG GDVLEPE+G
Sbjct: 72 RLEGKLEQYPDQLARACVELAKDWRTDRYMRRLEAMLIVADKSETFTLTGAGDVLEPEDG 131
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG+YALSAARAL+ + AE IARKAM IA++ICVY+N N+ +ETL
Sbjct: 132 VAAIGSGGNYALSAARALLDYEEDAEVIARKAMKIASEICVYSNGNLTVETL 183
>gi|254452129|ref|ZP_05065566.1| ATP-dependent protease HslV [Octadecabacter antarcticus 238]
gi|198266535|gb|EDY90805.1| ATP-dependent protease HslV [Octadecabacter antarcticus 238]
Length = 186
Score = 244 bits (623), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/175 (69%), Positives = 144/175 (82%), Gaps = 2/175 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ VRK G VVIAGDGQVS+GQTVMK ARKVRRL G ++I GFAGS+ADAFTL
Sbjct: 10 HGTTIIGVRKGGEVVIAGDGQVSVGQTVMKGTARKVRRLTAGGSDVICGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLEKKLE P QL R+SVELAK+WR DKYL+ LEAM++++D LVITG GDVLEPE
Sbjct: 70 LERLEKKLEATPGQLARASVELAKEWRTDKYLQKLEAMLIVSDGKDLLVITGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
V AIGSGG++AL+A RALM + SAEEIAR+AM+IA+DICVYTN N+ +ET+K
Sbjct: 130 YDVTAIGSGGNFALAAGRALMDLEFSAEEIARRAMAIASDICVYTNGNLTVETIK 184
>gi|294675592|ref|YP_003576207.1| ATP-dependent protease HslV [Rhodobacter capsulatus SB 1003]
gi|294474412|gb|ADE83800.1| ATP-dependent protease HslV [Rhodobacter capsulatus SB 1003]
Length = 185
Score = 244 bits (623), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/184 (67%), Positives = 145/184 (78%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGF 61
M D+ + H TTI+ VRK G VV+AGDGQVSLGQTV+K ARKVRRL G ++AGF
Sbjct: 1 MTDEKFP-GWHGTTIIGVRKGGRVVVAGDGQVSLGQTVIKGTARKVRRLSPGGREVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLEKKLE P QL R+ VELAKDWR DKYLRNLEAM+++ D VI
Sbjct: 60 AGSTADAFTLLERLEKKLEAAPGQLARACVELAKDWRTDKYLRNLEAMLIVTDGADLYVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG+YAL+AARALM + AE IARKAM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNYALAAARALMDSDLDAEAIARKAMAIAADICVYTNGNLT 179
Query: 182 LETL 185
+E++
Sbjct: 180 VESI 183
>gi|328545936|ref|YP_004306045.1| ATP-dependent protease subunit HslV [polymorphum gilvum
SL003B-26A1]
gi|326415676|gb|ADZ72739.1| ATP-dependent protease subunit HslV [Polymorphum gilvum
SL003B-26A1]
Length = 186
Score = 244 bits (623), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/182 (70%), Positives = 150/182 (82%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M +H H TTIL VRKDG VVIAGDGQVSLGQTV+K ARKVR L KG +I GFAG
Sbjct: 1 MSAEHGPAVWHGTTILMVRKDGRVVIAGDGQVSLGQTVIKNTARKVRPLAKGEVIGGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTL ERLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+ADK+++LV+TG
Sbjct: 61 ATADAFTLFERLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKSVSLVLTG 120
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE GVM IGSGG+YAL+AARAL+ AE IAR+AM+IAADICVYTN NI++E
Sbjct: 121 TGDVLEPEGGVMGIGSGGNYALAAARALIDGDLDAEAIARRAMTIAADICVYTNGNILVE 180
Query: 184 TL 185
+L
Sbjct: 181 SL 182
>gi|254418251|ref|ZP_05031975.1| peptidase, T1 family [Brevundimonas sp. BAL3]
gi|196184428|gb|EDX79404.1| peptidase, T1 family [Brevundimonas sp. BAL3]
Length = 184
Score = 244 bits (622), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 117/174 (67%), Positives = 144/174 (82%), Gaps = 1/174 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL VRK+G VIAGDGQVS+G T++K ARKVR L G ++AGFAG++ADAFTL+E
Sbjct: 10 HGTTILAVRKNGRTVIAGDGQVSMGPTIVKGAARKVRTLAGGKVLAGFAGATADAFTLIE 69
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+ADK+ +TG+GDVLEPE+G
Sbjct: 70 RLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADKSSIFTVTGVGDVLEPEHG 129
Query: 134 VMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
V A+GSGG+YALSAARAL+ T AE +ARKAM IAA+ICVYTN N+ +ETL+
Sbjct: 130 VAAVGSGGNYALSAARALIEETDLDAEAVARKAMKIAAEICVYTNGNLTVETLE 183
>gi|170749485|ref|YP_001755745.1| ATP-dependent protease peptidase subunit [Methylobacterium
radiotolerans JCM 2831]
gi|170656007|gb|ACB25062.1| 20S proteasome A and B subunits [Methylobacterium radiotolerans JCM
2831]
Length = 191
Score = 244 bits (622), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 123/180 (68%), Positives = 148/180 (82%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D+ +MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++
Sbjct: 10 DRGAVPQMHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGAVIGGFAGAT 69
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTL ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+AD+ ++L+++G G
Sbjct: 70 ADAFTLFERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADREVSLLLSGSG 129
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GVMAIGSGG+YAL+AARAL AE I R+AM+IAA+ICVYTN N+V+E L
Sbjct: 130 DVLEPESGVMAIGSGGNYALAAARALEEGDLDAEAIVRRAMAIAAEICVYTNGNLVIEAL 189
>gi|329891072|ref|ZP_08269415.1| ATP-dependent protease hslV [Brevundimonas diminuta ATCC 11568]
gi|328846373|gb|EGF95937.1| ATP-dependent protease hslV [Brevundimonas diminuta ATCC 11568]
Length = 183
Score = 244 bits (622), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/174 (67%), Positives = 143/174 (82%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL VRK+G VIAGDGQVS+G T++K ARKVR L G ++AGFAG++ADA TL+E
Sbjct: 10 HGTTILAVRKNGRTVIAGDGQVSMGPTIVKGAARKVRTLANGKVLAGFAGATADALTLIE 69
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP+QL R+ VELAKDWR D+YLR LEAM+L+ADK L +TG+GDVLEPE G
Sbjct: 70 RLEAKLEQYPDQLARACVELAKDWRTDRYLRRLEAMLLVADKDTILTVTGVGDVLEPEYG 129
Query: 134 VMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V A+GSGG+YAL+AARAL+ T+ AE+IARKAM IAADICVYTN N+ +E+L
Sbjct: 130 VAAVGSGGNYALAAARALIDEHTELDAEQIARKAMKIAADICVYTNGNLTIESL 183
>gi|163732948|ref|ZP_02140392.1| ATP-dependent protease peptidase subunit [Roseobacter litoralis Och
149]
gi|161393483|gb|EDQ17808.1| ATP-dependent protease peptidase subunit [Roseobacter litoralis Och
149]
Length = 185
Score = 243 bits (621), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/174 (67%), Positives = 143/174 (82%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI+ V+KDG VVIAGDGQVSLGQTV+K ARKVRRL G +++AGFAGS+ADAFTL
Sbjct: 10 HGTTIIGVKKDGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVAGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R+SVELAKDWR DKYL+ LEAM++++D VITG GDVLEPE
Sbjct: 70 LERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGKDIFVITGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG+YAL+AAR +M ++ +AEE+AR AM+IAADICVYTN N+ +E +
Sbjct: 130 HDVTAIGSGGNYALAAARGMMDSKRTAEEVARDAMAIAADICVYTNGNLTVEKI 183
>gi|110677842|ref|YP_680849.1| ATP-dependent protease peptidase subunit [Roseobacter denitrificans
OCh 114]
gi|123065963|sp|Q16CY0|HSLV_ROSDO RecName: Full=ATP-dependent protease subunit HslV
gi|109453958|gb|ABG30163.1| ATP-dependent protease hslV [Roseobacter denitrificans OCh 114]
Length = 185
Score = 243 bits (620), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 119/174 (68%), Positives = 142/174 (81%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G +++AGFAGS+ADAFTL
Sbjct: 10 HGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVAGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R+SVELAKDWR DKYL+ LEAM++++D VITG GDVLEPE
Sbjct: 70 LERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGKDIFVITGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG+YAL+AAR +M + SAEE+AR AM+IAADICVYTN N+ +ET+
Sbjct: 130 HDVTAIGSGGNYALAAARGMMDSPRSAEEVARDAMAIAADICVYTNGNLTVETI 183
>gi|302381135|ref|YP_003816958.1| 20S proteasome A and subunit betas [Brevundimonas subvibrioides
ATCC 15264]
gi|302191763|gb|ADK99334.1| 20S proteasome A and B subunits [Brevundimonas subvibrioides ATCC
15264]
Length = 189
Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 143/176 (81%), Gaps = 1/176 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL VRKDG VIAGDGQVS+G T++K ARKVR L G ++AGFAG++ADAFTL+E
Sbjct: 12 HGTTILAVRKDGRTVIAGDGQVSMGATIVKGAARKVRTLAGGKVLAGFAGATADAFTLIE 71
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+ADK +TG+GDVLEPE G
Sbjct: 72 RLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADKDAIFTVTGVGDVLEPEYG 131
Query: 134 VMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
V A+GSGG+YAL+AARAL+ +T AE +AR+AM+IAADICVYTN N+ +E L G
Sbjct: 132 VAAVGSGGNYALAAARALIDNTDMDAEAVARRAMAIAADICVYTNGNLTVEILGGG 187
>gi|310817175|ref|YP_003965139.1| ATP-dependent HslUV protease [Ketogulonicigenium vulgare Y25]
gi|308755910|gb|ADO43839.1| ATP-dependent HslUV protease [Ketogulonicigenium vulgare Y25]
Length = 194
Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/174 (69%), Positives = 141/174 (81%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
H TTI+ VRK+G VVIAGDGQVSLGQTV+K ARKVRRL G ++ GFAGS+ADAFTL
Sbjct: 10 HGTTIIGVRKNGKVVIAGDGQVSLGQTVIKGTARKVRRLNPGGRPVLVGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE+KLE P Q+ R+ VELAKDWR DKYL+ LEAM+++ D LV+TG GDVLEPE
Sbjct: 70 LERLERKLEAAPGQMARACVELAKDWRTDKYLQKLEAMLIVTDGDALLVVTGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG+YAL+AARALMST AE IAR+AMSIAA+ICVYTN N+ LE L
Sbjct: 130 HDVAAIGSGGNYALAAARALMSTDLDAENIARRAMSIAAEICVYTNGNVTLEQL 183
>gi|254464707|ref|ZP_05078118.1| ATP-dependent protease HslV [Rhodobacterales bacterium Y4I]
gi|206685615|gb|EDZ46097.1| ATP-dependent protease HslV [Rhodobacterales bacterium Y4I]
Length = 185
Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/184 (65%), Positives = 144/184 (78%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D + H TTI+ V+K+G VVIAGDGQVSLGQTV+K ARKVRRL G +++AGF
Sbjct: 1 MADDKFP-GWHGTTIIGVKKNGQVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D VI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGKDMFVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG+YAL+AAR LM + SAE +AR AM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNYALAAARGLMDSDRSAETVARDAMAIAADICVYTNGNLT 179
Query: 182 LETL 185
+ET+
Sbjct: 180 VETI 183
>gi|114798299|ref|YP_760731.1| ATP-dependent protease peptidase subunit [Hyphomonas neptunium ATCC
15444]
gi|123128718|sp|Q0C0L2|HSLV_HYPNA RecName: Full=ATP-dependent protease subunit HslV
gi|114738473|gb|ABI76598.1| ATP-dependent protease HslVU [Hyphomonas neptunium ATCC 15444]
Length = 185
Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/174 (64%), Positives = 144/174 (82%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT+L VRK+G +V+ DGQVS+GQT+MK NARKVRR+ G I+AGFAG++ADAFTL E
Sbjct: 12 HGTTVLAVRKNGKLVMLSDGQVSMGQTIMKGNARKVRRIAGGQILAGFAGATADAFTLFE 71
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLE++P+QL R++VELAKDWR +KYL+ LEA++++ADK TLVITG GDVLEPE+
Sbjct: 72 RLEAKLERFPDQLQRAAVELAKDWRTEKYLQKLEALLIVADKHSTLVITGAGDVLEPEHH 131
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
V++IGSGG+YAL+AAR L + AE I RKAM IAADICVYTN + +ETL++
Sbjct: 132 VVSIGSGGNYALAAARGLYDYEEDAETIGRKAMQIAADICVYTNGHFSVETLEI 185
>gi|23010577|ref|ZP_00051217.1| COG5405: ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 176
Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/173 (70%), Positives = 144/173 (83%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG++I GFAG++ADAFTL
Sbjct: 1 MHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGSVIGGFAGATADAFTLF 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+AD+ ++L+++G GDVLEPE
Sbjct: 61 ERLEGKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADREVSLLLSGSGDVLEPET 120
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GVMAIGSGG+YAL+AARAL AE I R+AM IAADICVYTN ++V+E L
Sbjct: 121 GVMAIGSGGNYALAAARALEEGDLDAEAIVRRAMKIAADICVYTNGSLVIEAL 173
>gi|300024850|ref|YP_003757461.1| 20S proteasome A and subunit betas [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526671|gb|ADJ25140.1| 20S proteasome A and B subunits [Hyphomicrobium denitrificans ATCC
51888]
Length = 190
Score = 241 bits (616), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/172 (76%), Positives = 150/172 (87%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTILTVRKDG VV+AGDGQVSLGQTV+K+NARKVRRLGKG++I GFAG++ADAFTL E
Sbjct: 14 HATTILTVRKDGKVVVAGDGQVSLGQTVIKSNARKVRRLGKGDVIGGFAGATADAFTLFE 73
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL R+ VELAKDWR D+YLR LEAM+++AD T TLV+TG GDVLEPEN
Sbjct: 74 RLEAKLEQYPGQLTRACVELAKDWRTDRYLRRLEAMMIVADATTTLVLTGTGDVLEPENA 133
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ IGSGG+YAL+AARAL+ AE IARKAMSIAA+ICVYTN NIV+ETL
Sbjct: 134 IAGIGSGGNYALAAARALLDQPLDAEAIARKAMSIAAEICVYTNSNIVVETL 185
>gi|330813380|ref|YP_004357619.1| ATP-dependent protease HslV [Candidatus Pelagibacter sp. IMCC9063]
gi|327486475|gb|AEA80880.1| ATP-dependent protease HslV [Candidatus Pelagibacter sp. IMCC9063]
Length = 179
Score = 241 bits (614), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 146/173 (84%), Gaps = 1/173 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI VRKDG VVIAGDGQVS+G TVMK+ A+KVR++ K NIIAGFAGS+ADAFTL E
Sbjct: 7 HGTTIALVRKDGDVVIAGDGQVSIGNTVMKSTAKKVRKIEKRNIIAGFAGSTADAFTLFE 66
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLE++ QL R++VELAKDWR DKYLR LEA++L+ADK + VITG GDVLEPE G
Sbjct: 67 RLESKLEKHGGQLTRAAVELAKDWRSDKYLRRLEALMLVADKDKSFVITGQGDVLEPEYG 126
Query: 134 VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
V+AIGSGG+YAL+AARA++ + +AEEIA++++ IA+DICV+TN+NI +E L
Sbjct: 127 VVAIGSGGNYALAAARAMIDDKTKTAEEIAKRSIEIASDICVFTNNNITIEKL 179
>gi|16127957|ref|NP_422521.1| ATP-dependent protease peptidase subunit [Caulobacter crescentus
CB15]
gi|21759201|sp|Q9A239|HSLV_CAUCR RecName: Full=ATP-dependent protease subunit HslV
gi|13425497|gb|AAK25689.1| heat shock protein HslV [Caulobacter crescentus CB15]
Length = 188
Score = 241 bits (614), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 142/177 (80%), Gaps = 5/177 (2%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL VRK+G VIAGDGQVS+G TV+K NARKVRRL G ++AGFAG++ADAFTL+E
Sbjct: 12 HGTTILAVRKNGSTVIAGDGQVSMGPTVVKGNARKVRRLAGGKVVAGFAGATADAFTLIE 71
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP--- 130
RLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+ADKT +TG+GDVLEP
Sbjct: 72 RLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADKTAIYTVTGVGDVLEPGES 131
Query: 131 --ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG+YAL+A +AL+ SAE+IARKAM IAA+ICVYTN N+ +E+L
Sbjct: 132 LGGGAVAAIGSGGNYALAAGKALIDLDLSAEDIARKAMGIAAEICVYTNGNLTVESL 188
>gi|254511675|ref|ZP_05123742.1| ATP-dependent protease HslV [Rhodobacteraceae bacterium KLH11]
gi|221535386|gb|EEE38374.1| ATP-dependent protease HslV [Rhodobacteraceae bacterium KLH11]
Length = 183
Score = 241 bits (614), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 144/184 (78%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGF 61
M D + H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G ++AGF
Sbjct: 1 MADSDFP-GWHGTTIIGVKKGGQVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFEVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D LVI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGKDLLVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AARALM + AE++AR+AM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHNVAAIGSGGNFALAAARALMDSDKPAEQVAREAMAIAADICVYTNGNLT 179
Query: 182 LETL 185
+E +
Sbjct: 180 VEAI 183
>gi|119385515|ref|YP_916571.1| ATP-dependent protease peptidase subunit [Paracoccus denitrificans
PD1222]
gi|189028453|sp|A1B5T1|HSLV_PARDP RecName: Full=ATP-dependent protease subunit HslV
gi|119375282|gb|ABL70875.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Paracoccus denitrificans PD1222]
Length = 184
Score = 241 bits (614), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/174 (67%), Positives = 139/174 (79%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
H TTIL VR+ G VV+AGDGQVS+GQTVMK ARKVRRL G ++ GFAGS+ADAFTL
Sbjct: 10 HGTTILAVRRAGRVVVAGDGQVSVGQTVMKGTARKVRRLNPGGHEVVVGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLEKKLE P QL R+ V+LAKDWRMDKYLRNLEAM+++ D V+TG GDVLEPE
Sbjct: 70 LERLEKKLEAAPGQLARACVDLAKDWRMDKYLRNLEAMLIVTDGRDIFVVTGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG++AL+AAR LM + AE +ARKAM+IAADICVYTN N+ +E L
Sbjct: 130 HDVAAIGSGGNFALAAARGLMESDLDAEAVARKAMAIAADICVYTNGNLTVEVL 183
>gi|221236779|ref|YP_002519216.1| ATP-dependent protease peptidase subunit [Caulobacter crescentus
NA1000]
gi|220965952|gb|ACL97308.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
[Caulobacter crescentus NA1000]
Length = 200
Score = 241 bits (614), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 142/177 (80%), Gaps = 5/177 (2%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL VRK+G VIAGDGQVS+G TV+K NARKVRRL G ++AGFAG++ADAFTL+E
Sbjct: 24 HGTTILAVRKNGSTVIAGDGQVSMGPTVVKGNARKVRRLAGGKVVAGFAGATADAFTLIE 83
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP--- 130
RLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+ADKT +TG+GDVLEP
Sbjct: 84 RLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADKTAIYTVTGVGDVLEPGES 143
Query: 131 --ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG+YAL+A +AL+ SAE+IARKAM IAA+ICVYTN N+ +E+L
Sbjct: 144 LGGGAVAAIGSGGNYALAAGKALIDLDLSAEDIARKAMGIAAEICVYTNGNLTVESL 200
>gi|158421846|ref|YP_001523138.1| ATP-dependent protease peptidase subunit [Azorhizobium caulinodans
ORS 571]
gi|158328735|dbj|BAF86220.1| ATP-dependent protease [Azorhizobium caulinodans ORS 571]
Length = 197
Score = 240 bits (613), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 119/178 (66%), Positives = 148/178 (83%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H ++ TTI+TVRK V IAGDGQV+LGQTV+KANARKVRRLGKG++I GFAG++AD
Sbjct: 19 HSPDTIYGTTIVTVRKGNRVAIAGDGQVTLGQTVLKANARKVRRLGKGDVIGGFAGATAD 78
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++AD ++LV+TG GDV
Sbjct: 79 AFTLFERLEAKLEQYPGQLQRAAVELAKDWRTDRYLRRLEAMMIVADANVSLVLTGTGDV 138
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE GV IGSGG YAL+AARAL+ +++ E I R+++ IAADICVYTN NI++ET+
Sbjct: 139 LEPEAGVAGIGSGGMYALAAARALLDREDAPEAIVRRSLEIAADICVYTNRNIIVETI 196
>gi|197103499|ref|YP_002128876.1| heat shock protein HslV [Phenylobacterium zucineum HLK1]
gi|196476919|gb|ACG76447.1| heat shock protein HslV [Phenylobacterium zucineum HLK1]
Length = 182
Score = 240 bits (613), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 112/172 (65%), Positives = 142/172 (82%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL VRK+G V+AGDGQVS+GQT++K +A+KVRRL G +IAGFAGS+ADAFTL+E
Sbjct: 11 HGTTILAVRKNGKTVVAGDGQVSMGQTIVKGSAKKVRRLAGGRVIAGFAGSTADAFTLIE 70
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL R+ V+LAKDWR D+YLR LEAM+++A++ +TG+GDVLEPE+G
Sbjct: 71 RLEAKLEQYPEQLARACVDLAKDWRTDRYLRRLEAMLIVANQEQIFTVTGVGDVLEPEHG 130
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG +AL+AARAL+ T AE +AR+AM+IAA+ICVYTN + +E L
Sbjct: 131 VAAIGSGGIFALAAARALVDTDLDAETVARRAMAIAAEICVYTNGELTVEAL 182
>gi|126724541|ref|ZP_01740384.1| ATP-dependent protease peptidase subunit [Rhodobacterales bacterium
HTCC2150]
gi|126705705|gb|EBA04795.1| ATP-dependent protease peptidase subunit [Rhodobacterales bacterium
HTCC2150]
Length = 189
Score = 240 bits (613), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 145/175 (82%), Gaps = 2/175 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ V+KDG VVIAGDGQVSLG TV+K ARKVRRL GK +++AGFAGS+ADAFTL
Sbjct: 14 HGTTIIGVKKDGHVVIAGDGQVSLGPTVIKGTARKVRRLKTGKSDVVAGFAGSTADAFTL 73
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R++VELAKDWR DKYL+ LEAM+++ D L+ITG GDVLEPE
Sbjct: 74 LERLEAKLEATPGQLARAAVELAKDWRTDKYLQKLEAMLIVTDGKELLIITGAGDVLEPE 133
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ V AIGSGG++AL+AAR +M ++ SAE++AR+AM+IAADICVYTN + +E++K
Sbjct: 134 HNVAAIGSGGNFALAAARGMMESELSAEDVARRAMAIAADICVYTNGKLTVESIK 188
>gi|295691593|ref|YP_003595286.1| 20S proteasome subunits A/b [Caulobacter segnis ATCC 21756]
gi|295433496|gb|ADG12668.1| 20S proteasome A and B subunits [Caulobacter segnis ATCC 21756]
Length = 188
Score = 240 bits (612), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 118/188 (62%), Positives = 145/188 (77%), Gaps = 5/188 (2%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ G+ H TTIL VRK+G VIAGDGQVS+G TV+K NARKVRRL G ++AGFA
Sbjct: 1 MQGNNSTFPDWHGTTILAVRKNGQTVIAGDGQVSMGPTVVKGNARKVRRLAGGKVVAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL+ERLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+AD T +T
Sbjct: 61 GATADAFTLIERLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADNTAIYTVT 120
Query: 123 GMGDVLEP-----ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTN 177
G+GDVLEP V AIGSGG+YAL+AA+AL+ SAE+IARKAM IAA+ICVYTN
Sbjct: 121 GVGDVLEPGESVGGGAVAAIGSGGNYALAAAKALIDQDLSAEDIARKAMGIAAEICVYTN 180
Query: 178 HNIVLETL 185
N+ +E+L
Sbjct: 181 GNLTVESL 188
>gi|254459656|ref|ZP_05073072.1| ATP-dependent protease HslV [Rhodobacterales bacterium HTCC2083]
gi|206676245|gb|EDZ40732.1| ATP-dependent protease HslV [Rhodobacteraceae bacterium HTCC2083]
Length = 185
Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 140/175 (80%), Gaps = 2/175 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI+ VRK G VVIAGDGQVSLGQTV+K A+KVRRL G +++ GFAGS+ADAFTL
Sbjct: 10 HGTTIIGVRKGGEVVIAGDGQVSLGQTVIKGTAKKVRRLSPGGYDVVCGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D VITG GDVLEPE
Sbjct: 70 LERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGKDLFVITGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ V AIGSGG++AL+AAR LM +AEEIARKAM+IA+DICVYTN + +ET+K
Sbjct: 130 HDVTAIGSGGNFALAAARGLMEGDGTAEEIARKAMAIASDICVYTNGKLTVETIK 184
>gi|254486874|ref|ZP_05100079.1| ATP-dependent protease HslV [Roseobacter sp. GAI101]
gi|214043743|gb|EEB84381.1| ATP-dependent protease HslV [Roseobacter sp. GAI101]
Length = 185
Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/175 (68%), Positives = 140/175 (80%), Gaps = 2/175 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G +++AGFAGS+ADAFTL
Sbjct: 10 HGTTIIGVKKAGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVAGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D LVITG GDVLEPE
Sbjct: 70 LERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGVELLVITGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ V AIGSGG+YAL+AAR +M ++ AE IAR AM IAADICVYTN N+ +E +K
Sbjct: 130 HDVAAIGSGGNYALAAARGMMDSERDAETIARDAMKIAADICVYTNGNLTVEKIK 184
>gi|329848322|ref|ZP_08263350.1| ATP-dependent protease hslV [Asticcacaulis biprosthecum C19]
gi|328843385|gb|EGF92954.1| ATP-dependent protease hslV [Asticcacaulis biprosthecum C19]
Length = 184
Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/172 (67%), Positives = 139/172 (80%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ VR++G VIAGDGQVS+G T++K ARKVR L G +I GFAG++ADAFTLLE
Sbjct: 12 HGTTIVAVRQNGKTVIAGDGQVSMGATIVKGGARKVRALAGGKVITGFAGATADAFTLLE 71
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLE +P+QL R+ V+LAKDWR D+YLR LEAM+L+AD+ L +TG+GDVLEPE+G
Sbjct: 72 RLEAKLELFPDQLARACVDLAKDWRTDRYLRRLEAMLLVADRNHILTLTGVGDVLEPEDG 131
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG YALSAARALM + AE IARKAM IAA ICVYTN ++ LETL
Sbjct: 132 VAAIGSGGVYALSAARALMEYEPDAEVIARKAMKIAASICVYTNDHLTLETL 183
>gi|255263830|ref|ZP_05343172.1| ATP-dependent protease HslV [Thalassiobium sp. R2A62]
gi|255106165|gb|EET48839.1| ATP-dependent protease HslV [Thalassiobium sp. R2A62]
Length = 185
Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/185 (64%), Positives = 144/185 (77%), Gaps = 3/185 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D + H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G +++AGF
Sbjct: 1 MADSDFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGHDVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D T LVI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGTDLLVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR L AE+IAR+AM+IA+DICVYTN N+
Sbjct: 120 TGAGDVLEPEHNVAAIGSGGNFALAAARGLYDGDKPAEDIARQAMAIASDICVYTNGNLT 179
Query: 182 LETLK 186
+E +K
Sbjct: 180 VEVIK 184
>gi|260431949|ref|ZP_05785920.1| ATP-dependent protease HslV [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415777|gb|EEX09036.1| ATP-dependent protease HslV [Silicibacter lacuscaerulensis
ITI-1157]
Length = 185
Score = 239 bits (610), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/174 (67%), Positives = 140/174 (80%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G I+AGFAGS+ADAFTL
Sbjct: 10 HGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFEIVAGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D VITG GDVLEPE
Sbjct: 70 LERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGVDMFVITGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG++AL+AARA+M + SAE++AR AM+IAADICVYTN N+ +E +
Sbjct: 130 HDVAAIGSGGNFALAAARAMMDSDKSAEQVARDAMAIAADICVYTNGNLTVERI 183
>gi|154251692|ref|YP_001412516.1| ATP-dependent protease peptidase subunit [Parvibaculum
lavamentivorans DS-1]
gi|189028454|sp|A7HSH6|HSLV_PARL1 RecName: Full=ATP-dependent protease subunit HslV
gi|154155642|gb|ABS62859.1| 20S proteasome A and B subunits [Parvibaculum lavamentivorans DS-1]
Length = 182
Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 148/175 (84%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H TTILTVRK G VVIAGDGQVS+G T+MK NARKVR LGKG++IAGFAG++ADA T
Sbjct: 6 INWHGTTILTVRKGGKVVIAGDGQVSMGDTIMKGNARKVRPLGKGDVIAGFAGATADAMT 65
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ERLE K+EQYP QL R+ VELAKDWR D++LR LEA++++ADK TLV+TG GDVLEP
Sbjct: 66 LFERLEAKIEQYPGQLTRACVELAKDWRTDRFLRRLEALMIVADKEATLVLTGNGDVLEP 125
Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E+GV+ IGSGG+YAL+AARAL+ SAEEIARKAM IAA ICVYTN+N+ +E+L
Sbjct: 126 ESGVVGIGSGGNYALAAARALIDMDLSAEEIARKAMGIAASICVYTNNNLTVESL 180
>gi|296116620|ref|ZP_06835230.1| ATP-dependent protease peptidase subunit [Gluconacetobacter
hansenii ATCC 23769]
gi|295976832|gb|EFG83600.1| ATP-dependent protease peptidase subunit [Gluconacetobacter
hansenii ATCC 23769]
Length = 197
Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/182 (63%), Positives = 145/182 (79%), Gaps = 2/182 (1%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGS 64
+ H + H TTIL VR+D V +AGDGQV+LG TV+K NARKVRR+G G+I+AGFAG+
Sbjct: 7 NPHDPIGWHGTTILCVRRDNQVAMAGDGQVTLGATVIKGNARKVRRIGPSGSILAGFAGA 66
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
+ADAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD + +TG
Sbjct: 67 TADAFTLLERLEAKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADADHSYTLTGN 126
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE+G++AIGSGG+YALSAARAL+ A EIA ++M IA DICVYTN+++ +E
Sbjct: 127 GDVLEPEDGIIAIGSGGNYALSAARALLGIDGLGAREIAERSMKIAGDICVYTNYSVTVE 186
Query: 184 TL 185
TL
Sbjct: 187 TL 188
>gi|83942013|ref|ZP_00954475.1| ATP-dependent protease hslV [Sulfitobacter sp. EE-36]
gi|83953062|ref|ZP_00961784.1| ATP-dependent protease hslV [Sulfitobacter sp. NAS-14.1]
gi|83842030|gb|EAP81198.1| ATP-dependent protease hslV [Sulfitobacter sp. NAS-14.1]
gi|83847833|gb|EAP85708.1| ATP-dependent protease hslV [Sulfitobacter sp. EE-36]
Length = 185
Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/174 (67%), Positives = 140/174 (80%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI+ V+KDG VVIAGDGQVSLGQTV+K ARKVRRL G +++AGFAGS+ADAFTL
Sbjct: 10 HGTTIIGVKKDGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVAGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R+SVELAKDWR DKYL+ LEAM++++D LVITG GDVLEPE
Sbjct: 70 LERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGRELLVITGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG+YAL+AAR +M + AE +AR AM IA+DICVYTN N+ +E +
Sbjct: 130 HSVAAIGSGGNYALAAARGMMDSDRDAETVARDAMKIASDICVYTNGNLTVEKI 183
>gi|146337378|ref|YP_001202426.1| ATP-dependent protease peptidase subunit [Bradyrhizobium sp.
ORS278]
gi|166221627|sp|A4YJV0|HSLV_BRASO RecName: Full=ATP-dependent protease subunit HslV
gi|146190184|emb|CAL74176.1| ATP-dependent protease hslV (protease subunit of a proteasome-like
degradation complex) [Bradyrhizobium sp. ORS278]
Length = 186
Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/172 (72%), Positives = 148/172 (86%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTILTVRK G VV+ GDGQVS+GQTV+K+NARKVR+LGKG++I GFAG++ADAFTL E
Sbjct: 12 HGTTILTVRKGGRVVVGGDGQVSIGQTVIKSNARKVRKLGKGDVIGGFAGATADAFTLFE 71
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVLEPE G
Sbjct: 72 RLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKEVSLVLTGTGDVLEPEAG 131
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VMAIGSGG+YAL+AARAL+ T AE I RK++ IAADICVYTN NI +E L
Sbjct: 132 VMAIGSGGNYALAAARALIDTDKDAESIVRKSLDIAADICVYTNRNITIEAL 183
>gi|118590479|ref|ZP_01547881.1| ATP-dependent protease peptidase subunit [Stappia aggregata IAM
12614]
gi|118436942|gb|EAV43581.1| ATP-dependent protease peptidase subunit [Stappia aggregata IAM
12614]
Length = 186
Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/186 (66%), Positives = 148/186 (79%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + + H TTI+ VRK G VVIAGDGQVSLGQTV+K ARKVR L KG +IAGFAG
Sbjct: 1 MSETREPAQWHGTTIMMVRKGGKVVIAGDGQVSLGQTVIKHTARKVRLLAKGEVIAGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTL ERLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+ADK ++LV+TG
Sbjct: 61 ATADAFTLFERLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKNVSLVLTG 120
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE GVM IGSGG+YAL+A RAL T AE IARKAM++AA+ICVYTN ++ +E
Sbjct: 121 TGDVLEPEGGVMGIGSGGNYALAAGRALADTDYDAETIARKAMAVAAEICVYTNASVTVE 180
Query: 184 TLKVGD 189
+L +
Sbjct: 181 SLDTAE 186
>gi|167649009|ref|YP_001686672.1| ATP-dependent protease peptidase subunit [Caulobacter sp. K31]
gi|189028424|sp|B0T7B0|HSLV_CAUSK RecName: Full=ATP-dependent protease subunit HslV
gi|167351439|gb|ABZ74174.1| 20S proteasome A and B subunits [Caulobacter sp. K31]
Length = 187
Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/177 (65%), Positives = 141/177 (79%), Gaps = 5/177 (2%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL VRK+G VIAGDGQVS+G TV+K NARKVRRL G ++AGFAG++ADAFTL+E
Sbjct: 11 HGTTILAVRKNGSTVIAGDGQVSMGPTVVKGNARKVRRLAGGKVVAGFAGATADAFTLIE 70
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP--- 130
RLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+AD +TG+GDVLEP
Sbjct: 71 RLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADADSIFTVTGVGDVLEPGES 130
Query: 131 --ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG+YAL+AA+AL+ +AEEIARKAM IAA+ICVYTN N+ +E+L
Sbjct: 131 TGGGSVAAIGSGGNYALAAAKALIDQDLTAEEIARKAMGIAAEICVYTNGNLTVESL 187
>gi|154246237|ref|YP_001417195.1| ATP-dependent protease peptidase subunit [Xanthobacter
autotrophicus Py2]
gi|154160322|gb|ABS67538.1| 20S proteasome A and B subunits [Xanthobacter autotrophicus Py2]
Length = 182
Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 148/179 (82%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRK V IAGDGQV+LGQTV+K+NARKVRRLG+G++I GFAG++A
Sbjct: 2 QHSPDTIYGTTIVTVRKGSRVAIAGDGQVTLGQTVLKSNARKVRRLGRGDVIGGFAGATA 61
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++AD +I+LV+TG GD
Sbjct: 62 DAFTLFERLEAKLEQYPGQLQRAAVELAKDWRTDRYLRRLEAMMIVADASISLVLTGTGD 121
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE GV IGSGG +AL+AARAL+ + E I R+++ IAADICVYTN NIV+ET+
Sbjct: 122 VLEPEVGVAGIGSGGMFALAAARALLDREEDPEAIVRRSLEIAADICVYTNRNIVVETI 180
>gi|126738521|ref|ZP_01754226.1| ATP-dependent protease peptidase subunit [Roseobacter sp.
SK209-2-6]
gi|126720320|gb|EBA17026.1| ATP-dependent protease peptidase subunit [Roseobacter sp.
SK209-2-6]
Length = 187
Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 145/184 (78%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D + H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G +++ GF
Sbjct: 1 MADDQFP-GWHGTTIIGVKKGGQVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVVGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM++++D T LVI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGTELLVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR +M + +AE++AR AM+IAADICVYTN +
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARGMMDSDRNAEQVARDAMAIAADICVYTNGRLT 179
Query: 182 LETL 185
+ET+
Sbjct: 180 VETI 183
>gi|254502215|ref|ZP_05114366.1| peptidase, T1 family [Labrenzia alexandrii DFL-11]
gi|222438286|gb|EEE44965.1| peptidase, T1 family [Labrenzia alexandrii DFL-11]
Length = 186
Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/186 (66%), Positives = 146/186 (78%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + H TTI+ VRK G VVIAGDGQVSLGQTV+K ARKVR L KG +IAGFAG
Sbjct: 1 MSESREPAVWHGTTIMMVRKGGKVVIAGDGQVSLGQTVIKHTARKVRPLAKGEVIAGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTL ERLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+ADK +LV+TG
Sbjct: 61 ATADAFTLFERLESKLEQYPGQLMRACVELAKDWRTDRYLRKLEAMMLVADKNTSLVLTG 120
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE G+M IGSGG+YAL+A RAL T AE IARKAM++AA+ICVYTN +I +E
Sbjct: 121 TGDVLEPEGGIMGIGSGGNYALAAGRALAETDFDAETIARKAMAVAAEICVYTNESITVE 180
Query: 184 TLKVGD 189
L+ +
Sbjct: 181 VLETAE 186
>gi|159045980|ref|YP_001534774.1| ATP-dependent protease peptidase subunit [Dinoroseobacter shibae
DFL 12]
gi|189028447|sp|A8LPA8|HSLV_DINSH RecName: Full=ATP-dependent protease subunit HslV
gi|157913740|gb|ABV95173.1| ATP-dependent HslUV protease [Dinoroseobacter shibae DFL 12]
Length = 185
Score = 238 bits (607), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/174 (66%), Positives = 141/174 (81%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI+ V+K+G VV+AGDGQVSLGQTV+K ARKVRRL G +++AGFAGS+ADAFTL
Sbjct: 10 HGTTIIGVKKNGKVVVAGDGQVSLGQTVIKGTARKVRRLTPGGHDVVAGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R++VELAKDWR DKYL+ LEAM+++ D ++ LVITG GDVLEPE
Sbjct: 70 LERLEAKLEATPGQLQRAAVELAKDWRTDKYLQKLEAMLIVTDGSLLLVITGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ + AIGSGG++AL+AAR LM AE IARKAM IAADICVYTN N+ +E +
Sbjct: 130 HDIAAIGSGGNFALAAARGLMEADFDAETIARKAMQIAADICVYTNGNLTVEAI 183
>gi|297180839|gb|ADI17044.1| ATP-dependent protease hslVU (clpYQ), peptidase subunit [uncultured
alpha proteobacterium HF0010_30A23]
Length = 334
Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 5/179 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAFTL 71
MH TTIL+VRK VV+AGDGQVSLG TVMK +A KVRRLGK N +I GFAG++ADAFTL
Sbjct: 150 MHGTTILSVRKGNEVVVAGDGQVSLGPTVMKGSAIKVRRLGKRNDVIGGFAGATADAFTL 209
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERLE KLE YP QL+R++VELAKDWR D+YLR LEAM+++ D +L++TG GDV+E E
Sbjct: 210 FERLEAKLETYPGQLVRAAVELAKDWRQDRYLRRLEAMLIVVDAEHSLIVTGTGDVVEAE 269
Query: 132 -NGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETLK 186
+GV+AIGSGG+YALSAARAL++ ++ +AE+IAR+AM +A DICVYTNH++ LE L+
Sbjct: 270 ADGVLAIGSGGNYALSAARALITVEDDSLTAEDIARRAMKVAGDICVYTNHSVRLEKLE 328
>gi|57239495|ref|YP_180631.1| ATP-dependent protease peptidase subunit [Ehrlichia ruminantium
str. Welgevonden]
gi|58579475|ref|YP_197687.1| ATP-dependent protease peptidase subunit [Ehrlichia ruminantium
str. Welgevonden]
gi|81557267|sp|Q5HAB3|HSLV_EHRRW RecName: Full=ATP-dependent protease subunit HslV
gi|57161574|emb|CAH58502.1| ATP-dependent protease HslV [Ehrlichia ruminantium str.
Welgevonden]
gi|58418101|emb|CAI27305.1| ATP-dependent protease hslV [Ehrlichia ruminantium str.
Welgevonden]
Length = 189
Score = 238 bits (606), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 148/181 (81%), Gaps = 6/181 (3%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
KM+ TTIL +R++ V+IAGDGQVSLG TVMK +A+KV+RL +I GFAG++ADAFTL
Sbjct: 8 KMYGTTILCIRRNNHVIIAGDGQVSLGHTVMKNSAKKVKRLANDTVITGFAGATADAFTL 67
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERLE KLE++P QLLR+ VELAKDWRMD+YLR LEAM+++ADK+++LVI+G GDVLEPE
Sbjct: 68 FERLEGKLEKHPGQLLRACVELAKDWRMDRYLRRLEAMMIVADKSVSLVISGNGDVLEPE 127
Query: 132 NGVMAIGSGGSYALSAARALMSTQN------SAEEIARKAMSIAADICVYTNHNIVLETL 185
NG+ AIGSGG+YAL+AA+AL + + + E I AM+IAA+IC+YTN+NI++E +
Sbjct: 128 NGIAAIGSGGNYALAAAKALCESNDKFSQNMTLEYIVTTAMNIAAEICIYTNNNIIMEKI 187
Query: 186 K 186
+
Sbjct: 188 E 188
>gi|296448578|ref|ZP_06890451.1| 20S proteasome A and B subunits [Methylosinus trichosporium OB3b]
gi|296253918|gb|EFH01072.1| 20S proteasome A and B subunits [Methylosinus trichosporium OB3b]
Length = 188
Score = 237 bits (605), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 125/176 (71%), Positives = 149/176 (84%), Gaps = 4/176 (2%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ V+K G VIAGDGQVSLGQT++KANA+KVRRLGKG++IAGFAG++ADAFTL E
Sbjct: 13 HATTIVLVKKGGRTVIAGDGQVSLGQTIVKANAKKVRRLGKGDVIAGFAGATADAFTLFE 72
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP--- 130
RLE KLEQYP QL R+ VELAKDWRMD+YLR LEAM+L+AD+ + L +TG GDVLEP
Sbjct: 73 RLEGKLEQYPGQLTRACVELAKDWRMDRYLRRLEAMMLVADREVGLTLTGAGDVLEPQAF 132
Query: 131 ENG-VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E+G V AIGSGG+YAL+AARAL+ T AE IAR+AM IAA+ICVYTN NIV+E +
Sbjct: 133 EHGSVAAIGSGGNYALAAARALLDTPLDAEPIARRAMEIAAEICVYTNTNIVVEAI 188
>gi|298293774|ref|YP_003695713.1| 20S proteasome A and subunit betas [Starkeya novella DSM 506]
gi|296930285|gb|ADH91094.1| 20S proteasome A and B subunits [Starkeya novella DSM 506]
Length = 183
Score = 237 bits (605), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 143/178 (80%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H ++ TTI++VR V I GDGQV+LG TVMKANARKVRRLGKG++I GFAG++AD
Sbjct: 3 HAPDTIYGTTIVSVRSGSRVAIGGDGQVTLGNTVMKANARKVRRLGKGDVIGGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ITLV+TG GDV
Sbjct: 63 AFTLFERLEAKLEQYPGQLQRAAVELAKDWRTDRYLRRLEAMMIVADKNITLVLTGTGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPENG+ AIGSGG +AL+AARAL + E I RK++ IAADIC+YTN + +ET+
Sbjct: 123 LEPENGITAIGSGGGFALAAARALADSGQDPEAIVRKSLGIAADICIYTNGQLTIETI 180
>gi|58617529|ref|YP_196728.1| ATP-dependent protease peptidase subunit [Ehrlichia ruminantium
str. Gardel]
gi|75432728|sp|Q5FGD0|HSLV_EHRRG RecName: Full=ATP-dependent protease subunit HslV
gi|58417141|emb|CAI28254.1| ATP-dependent protease hslV [Ehrlichia ruminantium str. Gardel]
Length = 189
Score = 237 bits (605), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 110/181 (60%), Positives = 148/181 (81%), Gaps = 6/181 (3%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
KM+ TTIL +R++ V+IAGDGQVSLG TVMK +A+KV+RL +I GFAG++ADAFTL
Sbjct: 8 KMYGTTILCIRRNNNVIIAGDGQVSLGHTVMKNSAKKVKRLANDTVITGFAGATADAFTL 67
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERLE KLE++P QLLR+ VELAKDWRMD+YLR LEAM+++ADK+++L+I+G GDVLEPE
Sbjct: 68 FERLEGKLEKHPGQLLRACVELAKDWRMDRYLRRLEAMMIVADKSVSLIISGNGDVLEPE 127
Query: 132 NGVMAIGSGGSYALSAARALMSTQN------SAEEIARKAMSIAADICVYTNHNIVLETL 185
NG+ AIGSGG+YAL+AA+AL + + + E I AM+IAA+IC+YTN+NI++E +
Sbjct: 128 NGIAAIGSGGNYALAAAKALCESNDKFSQNMTLEYIVTTAMNIAAEICIYTNNNIIMEKI 187
Query: 186 K 186
+
Sbjct: 188 E 188
>gi|144898076|emb|CAM74940.1| ATP-dependent protease [Magnetospirillum gryphiswaldense MSR-1]
Length = 181
Score = 237 bits (604), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 120/173 (69%), Positives = 150/173 (86%), Gaps = 1/173 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAFTLL 72
H TTIL+VRK+G VVIAGDGQVSLGQTV+KANARKVRR+G N I+ GFAG++ADAFTLL
Sbjct: 9 HGTTILSVRKNGRVVIAGDGQVSLGQTVIKANARKVRRIGANNDILVGFAGATADAFTLL 68
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++P QL R+ VELAKDWR D+YLR LEAM+ +ADK ++LV+TG GDVLEP +
Sbjct: 69 ERLEGKLEKHPGQLTRACVELAKDWRTDRYLRRLEAMMAVADKEVSLVLTGQGDVLEPSD 128
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++ IGSGG+YAL+AARAL+ + AEEI RK+M++AADICVYTN N+++E+L
Sbjct: 129 GIIGIGSGGNYALAAARALIDMEVDAEEIVRKSMAVAADICVYTNSNVIIESL 181
>gi|163742595|ref|ZP_02149981.1| ATP-dependent protease peptidase subunit [Phaeobacter gallaeciensis
2.10]
gi|161384180|gb|EDQ08563.1| ATP-dependent protease peptidase subunit [Phaeobacter gallaeciensis
2.10]
Length = 188
Score = 236 bits (603), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 147/189 (77%), Gaps = 3/189 (1%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAG 60
+M D + H TTI+ V+K G VVIAGDGQVSLGQTV+K +ARKVRRL G +++AG
Sbjct: 1 MMADDQFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGSARKVRRLSPGGFDVVAG 59
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
FAGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D V
Sbjct: 60 FAGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGADMFV 119
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
ITG+GDVLEPE+ V AIGSGG++AL+AAR +M ++ +AE +AR AM+IAADICVYTN +
Sbjct: 120 ITGVGDVLEPEHDVAAIGSGGNFALAAARGMMDSERNAEAVARDAMAIAADICVYTNGRL 179
Query: 181 VLETLKVGD 189
+E++ D
Sbjct: 180 TVESISQKD 188
>gi|86136741|ref|ZP_01055319.1| ATP-dependent protease peptidase subunit [Roseobacter sp. MED193]
gi|85826065|gb|EAQ46262.1| ATP-dependent protease peptidase subunit [Roseobacter sp. MED193]
Length = 204
Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/186 (63%), Positives = 142/186 (76%), Gaps = 3/186 (1%)
Query: 2 VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIA 59
V M D + H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G ++I
Sbjct: 7 VKMADDQFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVIV 65
Query: 60 GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
GFAGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D T L
Sbjct: 66 GFAGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGTELL 125
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHN 179
VITG GDVLEPE+ V AIGSGG++AL+AAR +M + AE +AR AM+IAADICVYTN
Sbjct: 126 VITGAGDVLEPEHNVAAIGSGGNFALAAARGMMDSDRDAEAVARDAMAIAADICVYTNGR 185
Query: 180 IVLETL 185
+ +E +
Sbjct: 186 LTVERI 191
>gi|84501209|ref|ZP_00999414.1| ATP-dependent protease peptidase subunit [Oceanicola batsensis
HTCC2597]
gi|84390500|gb|EAQ02988.1| ATP-dependent protease peptidase subunit [Oceanicola batsensis
HTCC2597]
Length = 185
Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/184 (63%), Positives = 142/184 (77%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M DK + H TTI+ VRK VV+AGDGQVS+GQTVMK ARKVRRL G +++ GF
Sbjct: 1 MADKDFP-GWHGTTIIGVRKGDEVVVAGDGQVSMGQTVMKGTARKVRRLSPGGYDVVCGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAF LLERLE KLE P QL R+ VELAKDWR DKYL+ LEAM+++ D L++
Sbjct: 60 AGSTADAFALLERLESKLEATPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGKELLIV 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE GV AIGSGG+YAL+AARAL+ T +AEEIARK++ IAA+ICVYTN N+
Sbjct: 120 TGAGDVLEPEYGVAAIGSGGNYALAAARALIDTDAAAEEIARKSLGIAAEICVYTNGNLT 179
Query: 182 LETL 185
+E +
Sbjct: 180 VERI 183
>gi|299133209|ref|ZP_07026404.1| 20S proteasome A and B subunits [Afipia sp. 1NLS2]
gi|298593346|gb|EFI53546.1| 20S proteasome A and B subunits [Afipia sp. 1NLS2]
Length = 192
Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 150/176 (85%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
A H TTILTVRK G VV+ GDGQVS+GQTV+K+NA+KVRRLGKG++I GFAG++ADAF
Sbjct: 15 AESWHGTTILTVRKGGKVVVGGDGQVSIGQTVIKSNAKKVRRLGKGDVIGGFAGATADAF 74
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ERLE KLEQYP QL R+ VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVLE
Sbjct: 75 TLFERLESKLEQYPGQLTRACVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLE 134
Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
PE+G++AIGSGG+YAL+AARAL + + AE I R+++ IAADICVYTN N+ +ETL
Sbjct: 135 PEDGIIAIGSGGNYALAAARALSDSSHDAEAIVRRSLEIAADICVYTNRNLTIETL 190
>gi|149187078|ref|ZP_01865384.1| ATP-dependent protease peptidase subunit [Erythrobacter sp. SD-21]
gi|148829289|gb|EDL47734.1| ATP-dependent protease peptidase subunit [Erythrobacter sp. SD-21]
Length = 186
Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 147/179 (82%), Gaps = 1/179 (0%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGS 64
++H V+ H TTI+ VRK +V+AGDGQVS+G TVMK NARKVRR+G+G ++AGFAG+
Sbjct: 6 NRHGLVQWHGTTIIGVRKGDRIVVAGDGQVSMGNTVMKPNARKVRRIGEGGKVVAGFAGA 65
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
+ADAFTL ERLEKKLEQY QLLR++VEL KDWR DKYLRNLEA++++ADK LV+TG
Sbjct: 66 TADAFTLFERLEKKLEQYNGQLLRAAVELTKDWRTDKYLRNLEALMIVADKENLLVLTGN 125
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE G+ AIGSGG+YAL+AA+A+ ++ E IARKAM +AADICV+TN N+ LE
Sbjct: 126 GDVLEPEGGITAIGSGGNYALAAAKAIAEYEDDPETIARKAMKVAADICVFTNGNVTLE 184
>gi|163738009|ref|ZP_02145425.1| ATP-dependent protease peptidase subunit [Phaeobacter gallaeciensis
BS107]
gi|161388625|gb|EDQ12978.1| ATP-dependent protease peptidase subunit [Phaeobacter gallaeciensis
BS107]
Length = 187
Score = 235 bits (599), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/188 (62%), Positives = 144/188 (76%), Gaps = 3/188 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D + H TTI+ V+K G VVIAGDGQVSLGQTV+K +ARKVRRL G +++AGF
Sbjct: 1 MADDQFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGSARKVRRLSPGGFDVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D VI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGADMFVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR +M + +AE +AR AM+IAADICVYTN +
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARGMMDSDRNAEAVARDAMAIAADICVYTNGRLT 179
Query: 182 LETLKVGD 189
+E++ D
Sbjct: 180 VESISQKD 187
>gi|163745125|ref|ZP_02152485.1| ATP-dependent protease peptidase subunit [Oceanibulbus indolifex
HEL-45]
gi|161381943|gb|EDQ06352.1| ATP-dependent protease peptidase subunit [Oceanibulbus indolifex
HEL-45]
Length = 186
Score = 234 bits (598), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/174 (67%), Positives = 139/174 (79%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVR+L G +++AGFAGS+ADAFTL
Sbjct: 11 HGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRKLSPGGYDVVAGFAGSTADAFTL 70
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D LVITG GDVLEPE
Sbjct: 71 LERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGKDLLVITGAGDVLEPE 130
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG+YAL+AARA+M + AE IAR AM+IAADICVYTN + +E +
Sbjct: 131 HEVAAIGSGGNYALAAARAMMDSDRDAETIARDAMAIAADICVYTNGKLTVEKI 184
>gi|149912867|ref|ZP_01901401.1| 20S proteasome, A and B subunits [Roseobacter sp. AzwK-3b]
gi|149813273|gb|EDM73099.1| 20S proteasome, A and B subunits [Roseobacter sp. AzwK-3b]
Length = 184
Score = 234 bits (596), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/174 (65%), Positives = 139/174 (79%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI+ V+K G VV+AGDGQVSLG TV+K +ARKVRRL G +++AGFAGS+ADAFTL
Sbjct: 9 HGTTIIGVKKAGTVVVAGDGQVSLGDTVIKGSARKVRRLSPGGYDVVAGFAGSTADAFTL 68
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R+ V LAKDWR DKYL+ LEAM+++ D VITG GDVLEPE
Sbjct: 69 LERLESKLESTPGQLQRACVALAKDWRTDKYLQKLEAMLIVTDGDQIYVITGAGDVLEPE 128
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG+YAL+AAR +M + SAE+IAR AM+IAADICVYTN N+ +E++
Sbjct: 129 HDVTAIGSGGNYALAAARGMMDSDRSAEQIARDAMAIAADICVYTNGNLTVESI 182
>gi|73667417|ref|YP_303433.1| ATP-dependent protease peptidase subunit [Ehrlichia canis str.
Jake]
gi|123614688|sp|Q3YR20|HSLV_EHRCJ RecName: Full=ATP-dependent protease subunit HslV
gi|72394558|gb|AAZ68835.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Ehrlichia canis str. Jake]
Length = 189
Score = 234 bits (596), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 147/181 (81%), Gaps = 6/181 (3%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+M+ TTIL +R+ V+IAGDGQVSLGQTV+K +A+K++RL +I GFAG++ADAFTL
Sbjct: 8 QMYGTTILCIRRGNQVIIAGDGQVSLGQTVIKNSAKKIKRLANDTVITGFAGATADAFTL 67
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERLE KLE++P QLLR+ VELAKDWRMDKYLR LEAM+++ADK+I+L+I+G GDVLEPE
Sbjct: 68 FERLESKLEKHPGQLLRACVELAKDWRMDKYLRRLEAMMIVADKSISLIISGNGDVLEPE 127
Query: 132 NGVMAIGSGGSYALSAARALMST-----QN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
NG+ AIGSGG+YAL+AA+AL T QN + E AM IA++IC+YTN+NI++E +
Sbjct: 128 NGIAAIGSGGNYALAAAKALCETNERFSQNMTLEYTITTAMRIASEICIYTNNNIIIEKI 187
Query: 186 K 186
+
Sbjct: 188 E 188
>gi|288959725|ref|YP_003450066.1| ATP-dependent HslUV protease, peptidase subunit [Azospirillum sp.
B510]
gi|288912033|dbj|BAI73522.1| ATP-dependent HslUV protease, peptidase subunit [Azospirillum sp.
B510]
Length = 221
Score = 233 bits (595), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 122/181 (67%), Positives = 147/181 (81%), Gaps = 1/181 (0%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
+ H ++ H TTIL+VRK+G VVIAGDGQVS+G TVMKANARKVR L G ++AGFAG++
Sbjct: 41 NPHDPIQWHGTTILSVRKNGQVVIAGDGQVSVGPTVMKANARKVRWLAGGTVMAGFAGAT 100
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADA TL ERLE KLEQYP QL R+ VE+AKDWR D+YLR LEAM+ +ADK+++LV+TG G
Sbjct: 101 ADAMTLFERLEGKLEQYPGQLTRACVEMAKDWRTDRYLRRLEAMMAVADKSVSLVLTGNG 160
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLET 184
DVLEPE+G++ IGSGGSYALSAARAL+ AE +ARKAM IAA ICVYTN N+ LE
Sbjct: 161 DVLEPEDGLIGIGSGGSYALSAARALIDIDGMEAEAVARKAMKIAAGICVYTNENVTLEK 220
Query: 185 L 185
L
Sbjct: 221 L 221
>gi|182677249|ref|YP_001831395.1| ATP-dependent protease peptidase subunit [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182633132|gb|ACB93906.1| 20S proteasome A and B subunits [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 197
Score = 233 bits (595), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 143/176 (81%), Gaps = 4/176 (2%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL V+K G VI GDGQV+LGQT++K NARKVRRL KG++I GFAG++ADAFTL E
Sbjct: 20 HGTTILMVKKGGRTVIGGDGQVTLGQTIVKGNARKVRRLSKGDVIGGFAGATADAFTLFE 79
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-- 131
RLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+ADK LV+TG GDVLEPE
Sbjct: 80 RLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKQAGLVLTGTGDVLEPEMT 139
Query: 132 --NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VM IGSGG+YAL+A RAL++T+ AE I RK++ IAADICVYTN N+++E++
Sbjct: 140 EQGSVMGIGSGGNYALAAGRALLATEFDAETITRKSLEIAADICVYTNRNLIIESI 195
>gi|56551142|ref|YP_161981.1| ATP-dependent protease peptidase subunit [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241761497|ref|ZP_04759585.1| 20S proteasome A and B subunits [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|260753208|ref|YP_003226101.1| ATP-dependent protease peptidase subunit [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|81598340|sp|Q5NQY4|HSLV_ZYMMO RecName: Full=ATP-dependent protease subunit HslV
gi|56542716|gb|AAV88870.1| 20S proteasome A and B subunits [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241374404|gb|EER63901.1| 20S proteasome A and B subunits [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|258552571|gb|ACV75517.1| 20S proteasome A and B subunits [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 184
Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/176 (67%), Positives = 149/176 (84%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H TTIL+VR++G VVIAGDGQVS+G TVMK NARKVRRLG G++I GFAG++ADAFT
Sbjct: 6 IGWHGTTILSVRRNGRVVIAGDGQVSMGNTVMKPNARKVRRLGDGSVIGGFAGATADAFT 65
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ERLE KLE++ QLLR++VELAKDWR DKYLRNLEA++++AD +TLV+TG GDVLEP
Sbjct: 66 LFERLEAKLERHNGQLLRAAVELAKDWRTDKYLRNLEALMIVADDQVTLVLTGNGDVLEP 125
Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG++ALSAARAL+ + AE IARKA+++AADICV+TN + +ETL+
Sbjct: 126 VGGIAAIGSGGNFALSAARALVDYEEDAEVIARKALAVAADICVFTNDQVTIETLE 181
>gi|262277813|ref|ZP_06055606.1| ATP-dependent protease HslVU, peptidase subunit [alpha
proteobacterium HIMB114]
gi|262224916|gb|EEY75375.1| ATP-dependent protease HslVU, peptidase subunit [alpha
proteobacterium HIMB114]
Length = 183
Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/173 (63%), Positives = 144/173 (83%), Gaps = 1/173 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ +RK VV+AGDGQVS+G TVMK+ A+KVR++ K ++IAGFAGS+ADAFTL E
Sbjct: 11 HGTTIVLIRKGNDVVVAGDGQVSIGNTVMKSTAKKVRKIEKRDVIAGFAGSTADAFTLFE 70
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLE++ QL R++VELAKDWR DKYLR LEA++ +ADK + +I+G GDVLEPE+G
Sbjct: 71 RLEAKLEKHGGQLTRAAVELAKDWRSDKYLRRLEALMAVADKKNSFIISGNGDVLEPEHG 130
Query: 134 VMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++AIGSGG+YAL+AARA++ + +AEEIA+K++ IAADICV+TNHNI E L
Sbjct: 131 IIAIGSGGNYALAAARAMIDDPKKTAEEIAKKSIEIAADICVFTNHNITTEKL 183
>gi|56417065|ref|YP_154139.1| ATP-dependent protease peptidase subunit [Anaplasma marginale str.
St. Maries]
gi|254995240|ref|ZP_05277430.1| ATP-dependent protease peptidase subunit [Anaplasma marginale str.
Mississippi]
gi|255003418|ref|ZP_05278382.1| ATP-dependent protease peptidase subunit [Anaplasma marginale str.
Puerto Rico]
gi|255004538|ref|ZP_05279339.1| ATP-dependent protease peptidase subunit [Anaplasma marginale str.
Virginia]
gi|81599106|sp|Q5P9Z6|HSLV_ANAMM RecName: Full=ATP-dependent protease subunit HslV
gi|56388297|gb|AAV86884.1| heat shock protein [Anaplasma marginale str. St. Maries]
Length = 189
Score = 232 bits (592), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 148/180 (82%), Gaps = 6/180 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M+ TTIL +R+ G V+IAGDGQVS+G +MK +A+K++RL ++I GFAG++ADAFTL
Sbjct: 9 MYGTTILCIRQGGSVIIAGDGQVSMGSAIMKTSAKKIKRLAGDSVITGFAGATADAFTLF 68
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++P QL+R+ VELAKDWR DKYLR LEAM+++ADK+++L+I+G GDVLEPEN
Sbjct: 69 ERLEAKLEKHPGQLMRACVELAKDWRRDKYLRRLEAMMIVADKSVSLIISGGGDVLEPEN 128
Query: 133 GVMAIGSGGSYALSAARALMSTQN------SAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG++ALSAARAL + ++ + E IA AM++A++ICVYTN+NI++E ++
Sbjct: 129 GIAAIGSGGNFALSAARALCAARDELSLDMTLEYIATAAMAVASEICVYTNNNIIMEKIE 188
>gi|21328718|gb|AAM48724.1| heat shock protein HslV [uncultured marine proteobacterium]
Length = 185
Score = 232 bits (592), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/184 (63%), Positives = 143/184 (77%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D ++ H TTI+ VRK VV+AGDGQVSLG TV+K +ARKVRRL G +++ GF
Sbjct: 1 MRDTNFP-GWHGTTIIGVRKGTQVVVAGDGQVSLGPTVIKGSARKVRRLSPGGNDVVVGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+ VELAKDWR DKYL+ LEAM+++ D L+I
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGAELLII 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+G+ AIGSGG++AL+AAR L T +AEEIARKAM+IA+DICVYTN N+
Sbjct: 120 TGAGDVLEPEHGIAAIGSGGNFALAAARGLQETDLNAEEIARKAMAIASDICVYTNGNLT 179
Query: 182 LETL 185
+E +
Sbjct: 180 VEVI 183
>gi|222475431|ref|YP_002563848.1| heat shock protein (hslV) [Anaplasma marginale str. Florida]
gi|222419569|gb|ACM49592.1| heat shock protein (hslV) [Anaplasma marginale str. Florida]
Length = 210
Score = 232 bits (592), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 148/180 (82%), Gaps = 6/180 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M+ TTIL +R+ G V+IAGDGQVS+G +MK +A+K++RL ++I GFAG++ADAFTL
Sbjct: 30 MYGTTILCIRQGGSVIIAGDGQVSMGSAIMKTSAKKIKRLAGDSVITGFAGATADAFTLF 89
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++P QL+R+ VELAKDWR DKYLR LEAM+++ADK+++L+I+G GDVLEPEN
Sbjct: 90 ERLEAKLEKHPGQLMRACVELAKDWRRDKYLRRLEAMMIVADKSVSLIISGGGDVLEPEN 149
Query: 133 GVMAIGSGGSYALSAARALMSTQN------SAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG++ALSAARAL + ++ + E IA AM++A++ICVYTN+NI++E ++
Sbjct: 150 GIAAIGSGGNFALSAARALCAARDELSLDMTLEYIATAAMAVASEICVYTNNNIIMEKIE 209
>gi|218680180|ref|ZP_03528077.1| ATP-dependent protease peptidase subunit [Rhizobium etli CIAT 894]
Length = 138
Score = 232 bits (591), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/137 (80%), Positives = 126/137 (91%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALM 152
AIGSGG++A +AARALM
Sbjct: 122 AIGSGGNFAFAAARALM 138
>gi|89052676|ref|YP_508127.1| ATP-dependent protease peptidase subunit [Jannaschia sp. CCS1]
gi|122499800|sp|Q28W10|HSLV_JANSC RecName: Full=ATP-dependent protease subunit HslV
gi|88862225|gb|ABD53102.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Jannaschia sp. CCS1]
Length = 185
Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 139/174 (79%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI+ VRK G VV+AGDGQVSLG TV+K +ARKVRRL G +++ GFAGS+ADAFTL
Sbjct: 10 HGTTIIGVRKGGKVVVAGDGQVSLGPTVIKGSARKVRRLSPGGYDVVCGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D + +ITG GDVLEPE
Sbjct: 70 LERLEAKLEATPGQLQRASVELAKDWRTDKYLQKLEAMLIVTDGSELYIITGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ + AIGSGG++AL+AAR +M + AE +AR AM+IA+DICVYTN N+ +ET+
Sbjct: 130 HDIAAIGSGGNFALAAARGMMDSDKDAEAVARDAMAIASDICVYTNGNLTVETI 183
>gi|288942672|ref|YP_003444912.1| 20S proteasome subunits A/B [Allochromatium vinosum DSM 180]
gi|288898044|gb|ADC63880.1| 20S proteasome A and B subunits [Allochromatium vinosum DSM 180]
Length = 182
Score = 231 bits (590), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 140/174 (80%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTIL+VR+ VVI GDGQVSLG TVMK NARKVRRL KG ++AGFAG++ADAFTL
Sbjct: 4 LRGTTILSVRRGDTVVIGGDGQVSLGPTVMKGNARKVRRLYKGRVLAGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KLE++ L R++VE+AKDWR D+ LR LEA++ IAD T +L+++G GDV+EPE
Sbjct: 64 ERFEGKLEKHQGHLTRAAVEMAKDWRTDRMLRRLEALLCIADSTTSLILSGTGDVIEPEQ 123
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+MAIGSGGS+ALSAARAL++ T+ A EI K++ IAADICVYTNHN+V+E L
Sbjct: 124 DIMAIGSGGSFALSAARALVANTELPAREIVEKSLHIAADICVYTNHNLVIEEL 177
>gi|258544136|ref|ZP_05704370.1| ATP-dependent protease HslV [Cardiobacterium hominis ATCC 15826]
gi|258520644|gb|EEV89503.1| ATP-dependent protease HslV [Cardiobacterium hominis ATCC 15826]
Length = 179
Score = 231 bits (589), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 113/174 (64%), Positives = 141/174 (81%), Gaps = 1/174 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H+TTIL+VR+ V IAGDGQVSLG T+MK NARK+RRL K I+AGFAG +ADAFTL E
Sbjct: 5 HSTTILSVRRGRHVAIAGDGQVSLGNTIMKGNARKIRRLYKNRILAGFAGGTADAFTLFE 64
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
R E KLE+ QLLR++VELAKDWR D+ LR LEAM+++AD+T TL+++G GDV+EPE+
Sbjct: 65 RFEGKLEEQDGQLLRAAVELAKDWRTDRMLRRLEAMLIVADETSTLILSGNGDVVEPEDS 124
Query: 134 VMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ AIGSGG YALSAARAL +T+ A IARK++ IA+DICVYTNHNI+ + LK
Sbjct: 125 IAAIGSGGMYALSAARALYHNTEMDALTIARKSLEIASDICVYTNHNIITDELK 178
>gi|66824981|ref|XP_645845.1| hypothetical protein DDB_G0269282 [Dictyostelium discoideum AX4]
gi|60474054|gb|EAL71991.1| hypothetical protein DDB_G0269282 [Dictyostelium discoideum AX4]
Length = 324
Score = 231 bits (588), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 142/180 (78%), Gaps = 1/180 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+M ATTIL+VR++G VVI GDGQV+LG +++K NA+K+R+L G IIAGFAGS ADAFTL
Sbjct: 75 RMKATTILSVRRNGKVVIIGDGQVTLGHSIVKPNAKKIRKLSDGKIIAGFAGSVADAFTL 134
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E LE+KL ++ LL+S VELA+ WR DKY R LEA +++ADK ITL I G GDVLEP
Sbjct: 135 FELLERKLTEHRGLLLKSCVELAQQWRTDKYYRRLEASLIVADKDITLNIDGNGDVLEPN 194
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
+G++AIGSGG +ALSAARAL++ + EEIAR++M IAADIC+YTNHN +LE + +E
Sbjct: 195 DGILAIGSGGDFALSAARALLTVPDLDPEEIARRSMKIAADICIYTNHNFILEVIDSNNE 254
>gi|269958526|ref|YP_003328313.1| ATP-dependent protease peptidase subunit [Anaplasma centrale str.
Israel]
gi|269848355|gb|ACZ48999.1| ATP-dependent protease peptidase subunit [Anaplasma centrale str.
Israel]
Length = 189
Score = 231 bits (588), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 145/179 (81%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M+ TTIL +R+ VVIAGDGQVS+G +MK +ARK++RL +I GFAG++ADAFTL
Sbjct: 9 MYGTTILCIRRGDSVVIAGDGQVSMGSAIMKTSARKIKRLAGDTVITGFAGATADAFTLF 68
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++P QL+R+ VELAKDWR DKYLR LEAM+++ADK+++L+I+G GDVLEPEN
Sbjct: 69 ERLEAKLEKHPGQLMRACVELAKDWRRDKYLRRLEAMMIVADKSVSLIISGGGDVLEPEN 128
Query: 133 GVMAIGSGGSYALSAARALMSTQN------SAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ AIGSGG++ALSAARAL + ++ + E IA AM++A++ICVYTN+NI++E +
Sbjct: 129 GIAAIGSGGNFALSAARALCTARDELSLDMTLEYIATAAMAVASEICVYTNNNIIMEKI 187
>gi|88658351|ref|YP_507783.1| ATP-dependent protease peptidase subunit [Ehrlichia chaffeensis
str. Arkansas]
gi|123492805|sp|Q2GFK0|HSLV_EHRCR RecName: Full=ATP-dependent protease subunit HslV
gi|88599808|gb|ABD45277.1| ATP-dependent protease HslV [Ehrlichia chaffeensis str. Arkansas]
Length = 189
Score = 231 bits (588), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 145/180 (80%), Gaps = 6/180 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M+ TTIL +R+ V+IAGDGQVSLG TV+K +A+K++RL +I GFAG++ADAFTL
Sbjct: 9 MYGTTILCIRRGNKVIIAGDGQVSLGHTVIKNSAKKIKRLANDTVITGFAGATADAFTLF 68
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++P QLLR+ VELAKDWRMD+YLR LEAM+++ADK+++L+I+G GDVLEPEN
Sbjct: 69 ERLESKLEKHPGQLLRACVELAKDWRMDRYLRRLEAMMIVADKSVSLIISGNGDVLEPEN 128
Query: 133 GVMAIGSGGSYALSAARALMSTQN------SAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YAL+AA+AL + + + E I AM IA++IC+YTN+NI++E ++
Sbjct: 129 GIAAIGSGGNYALAAAKALCESNDQFSQNMTLEYIITTAMKIASEICIYTNNNIIMEKIE 188
>gi|84514933|ref|ZP_01002296.1| ATP-dependent protease peptidase subunit [Loktanella vestfoldensis
SKA53]
gi|84511092|gb|EAQ07546.1| ATP-dependent protease peptidase subunit [Loktanella vestfoldensis
SKA53]
Length = 189
Score = 230 bits (587), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 126/187 (67%), Positives = 149/187 (79%), Gaps = 3/187 (1%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NII 58
MV M ++ H TTI+ VRKDG VVIAGDGQVSLGQTV+K ARKVRRL G ++I
Sbjct: 3 MVTMAQDNFP-GWHGTTIIGVRKDGKVVIAGDGQVSLGQTVIKGTARKVRRLSPGGQDVI 61
Query: 59 AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
GFAGS+ADAFTLLERLEKKLE P QL R+SVELAKDWR DKYL+ LEAM++++D
Sbjct: 62 CGFAGSTADAFTLLERLEKKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGKDL 121
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH 178
LVITG GDVLEPE+ V AIGSGG+YAL+A RALM + SAEEIAR+AM+IAADICVYTN
Sbjct: 122 LVITGAGDVLEPEHDVTAIGSGGNYALAAGRALMDSDLSAEEIARRAMAIAADICVYTNG 181
Query: 179 NIVLETL 185
+ +E++
Sbjct: 182 KLTVESI 188
>gi|254477320|ref|ZP_05090706.1| ATP-dependent protease HslV [Ruegeria sp. R11]
gi|214031563|gb|EEB72398.1| ATP-dependent protease HslV [Ruegeria sp. R11]
Length = 187
Score = 230 bits (587), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 141/188 (75%), Gaps = 3/188 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D + H TTI+ V+K VVIAGDGQVSLGQTV+K ARKVRRL G +++ GF
Sbjct: 1 MADDQFP-GWHGTTIIGVKKGDEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVVGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D + VI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGSDMFVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR +M + AE +AR AM+IAADICVYTN +
Sbjct: 120 TGAGDVLEPEHNVAAIGSGGNFALAAARGMMDSDRDAETVARDAMAIAADICVYTNGRLT 179
Query: 182 LETLKVGD 189
+E++ D
Sbjct: 180 VESISRKD 187
>gi|326796961|ref|YP_004314781.1| ATP-dependent protease hslV [Marinomonas mediterranea MMB-1]
gi|326547725|gb|ADZ92945.1| ATP-dependent protease hslV [Marinomonas mediterranea MMB-1]
Length = 183
Score = 230 bits (586), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 110/173 (63%), Positives = 144/173 (83%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTILTVRK+ VV+ GDGQVSLG TVMK NARKVRRL KG +IAGFAG +ADAFTL ER
Sbjct: 2 TTILTVRKENEVVVGGDGQVSLGNTVMKGNARKVRRLYKGEVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++V+LAKDWR DK LR LEAM+++A+K TL+ITG GDV+EP++G +
Sbjct: 62 EGQLEKHQGHLVRAAVDLAKDWRSDKALRKLEAMLVVANKENTLIITGTGDVVEPQHGAL 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG+YA +AARAL+ +T SA++I K+++IAADICV+TNHN+ +ET+ +
Sbjct: 122 AIGSGGNYAEAAARALIDNTDLSAKDIVEKSLNIAADICVFTNHNLTIETIAI 174
>gi|99082689|ref|YP_614843.1| ATP-dependent protease peptidase subunit [Ruegeria sp. TM1040]
gi|123378597|sp|Q1GCN5|HSLV_SILST RecName: Full=ATP-dependent protease subunit HslV
gi|99038969|gb|ABF65581.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Ruegeria sp. TM1040]
Length = 185
Score = 230 bits (586), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 113/174 (64%), Positives = 138/174 (79%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI+ VRK VV+AGDGQVSLGQTV+K +ARKVRRL G +++AGFAGS+ADAFTL
Sbjct: 10 HGTTIIGVRKGDEVVVAGDGQVSLGQTVIKGSARKVRRLSPGGYDVVAGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D VITG GDVLEPE
Sbjct: 70 LERLEAKLEATPGQLQRASVELAKDWRTDKYLQKLEAMLIVTDGKDLYVITGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG++AL+AAR +M + AE +AR AM+IA+DICVYTN N+ +E +
Sbjct: 130 HDVAAIGSGGNFALAAARGMMDSDRDAETVARDAMAIASDICVYTNGNLTVERI 183
>gi|259417627|ref|ZP_05741546.1| ATP-dependent protease HslV [Silicibacter sp. TrichCH4B]
gi|259346533|gb|EEW58347.1| ATP-dependent protease HslV [Silicibacter sp. TrichCH4B]
Length = 185
Score = 230 bits (586), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 113/174 (64%), Positives = 138/174 (79%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI+ VRK VV+AGDGQVSLGQTV+K +ARKVRRL G +++AGFAGS+ADAFTL
Sbjct: 10 HGTTIIGVRKGDEVVVAGDGQVSLGQTVIKGSARKVRRLSPGGYDVVAGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D VITG GDVLEPE
Sbjct: 70 LERLEAKLEATPGQLQRASVELAKDWRTDKYLQKLEAMLIVTDGKELYVITGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG++AL+AAR +M + AE +AR AM+IA+DICVYTN N+ +E +
Sbjct: 130 HDVAAIGSGGNFALAAARGMMDSDRDAETVARDAMAIASDICVYTNGNLTVERI 183
>gi|83313635|ref|YP_423899.1| ATP-dependent protease peptidase subunit [Magnetospirillum
magneticum AMB-1]
gi|123540234|sp|Q2VYI5|HSLV_MAGSA RecName: Full=ATP-dependent protease subunit HslV
gi|82948476|dbj|BAE53340.1| ATP-dependent protease HslVU, peptidase subunit [Magnetospirillum
magneticum AMB-1]
Length = 182
Score = 230 bits (586), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 119/173 (68%), Positives = 147/173 (84%), Gaps = 1/173 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL +RKDG VVIAGDGQVSLG TV+K NARKVR++G G+I+ GFAG++ADAFTLLE
Sbjct: 10 HGTTILCLRKDGRVVIAGDGQVSLGATVIKGNARKVRKVGGGSILVGFAGATADAFTLLE 69
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLE++P QL R+ VELAKDWR D+YLR LEAM+ +ADK ++LV+TG GDVLEPE+G
Sbjct: 70 RLEAKLEKHPGQLTRACVELAKDWRTDRYLRRLEAMMAVADKDVSLVLTGQGDVLEPEDG 129
Query: 134 VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
++ IGSGG+YAL+AARAL+ AE IARKAM+IAA ICVYTN N+++E+L
Sbjct: 130 IIGIGSGGNYALAAARALIDIDGLDAETIARKAMAIAAGICVYTNGNMIVESL 182
>gi|85710345|ref|ZP_01041410.1| ATP-dependent protease peptidase subunit [Erythrobacter sp. NAP1]
gi|85689055|gb|EAQ29059.1| ATP-dependent protease peptidase subunit [Erythrobacter sp. NAP1]
Length = 186
Score = 230 bits (586), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 118/182 (64%), Positives = 152/182 (83%), Gaps = 2/182 (1%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAG 63
GD H ++ H TTI+ V++ G V+AGDGQVS+G TVMK NARKVRR+G+G ++AGFAG
Sbjct: 6 GD-HGLIQWHGTTIIGVKRGGKTVVAGDGQVSMGNTVMKPNARKVRRIGEGEKVVAGFAG 64
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTL ERLE+KLEQY QL+R+SVELAKDWR DKYLRNLEA++++AD+ LV+TG
Sbjct: 65 ATADAFTLFERLERKLEQYSGQLMRASVELAKDWRTDKYLRNLEALMIVADEESLLVLTG 124
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE G+ AIGSGG+YAL+AARAL + AE+IARKAM++AA+ICV+TN N+ +E
Sbjct: 125 NGDVLEPEGGIAAIGSGGNYALAAARALSDYEEDAEQIARKAMAVAAEICVFTNGNLTVE 184
Query: 184 TL 185
T+
Sbjct: 185 TV 186
>gi|85372870|ref|YP_456932.1| ATP-dependent protease peptidase subunit [Erythrobacter litoralis
HTCC2594]
gi|84785953|gb|ABC62135.1| ATP-dependent protease HslVU peptidase subunit [Erythrobacter
litoralis HTCC2594]
Length = 185
Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 150/178 (84%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H + H TTI+ V++ +V+AGDGQVS+G TVMK NA+KVRR+G+G ++AGFAG++AD
Sbjct: 8 HGLTQWHGTTIIGVKRGDKIVVAGDGQVSMGNTVMKPNAKKVRRIGEGKVVAGFAGATAD 67
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ERLE+KL+QY QL+R++VELAKDWR DKYLRNLEA++++ADK LV+TG GDV
Sbjct: 68 AFTLFERLERKLDQYSGQLMRAAVELAKDWRTDKYLRNLEALMIVADKETLLVLTGNGDV 127
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE G+ AIGSGG+YAL+AARAL ++ AE+IARKAM++AA+ICV+TN ++ LET+
Sbjct: 128 LEPEGGIAAIGSGGNYALAAARALSDYEDDAEQIARKAMAVAAEICVFTNGSVTLETV 185
>gi|310822321|ref|YP_003954679.1| ATP-dependent protease hslv [Stigmatella aurantiaca DW4/3-1]
gi|309395393|gb|ADO72852.1| ATP-dependent protease HslV [Stigmatella aurantiaca DW4/3-1]
Length = 175
Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/174 (60%), Positives = 139/174 (79%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL VR++G VVIAGDGQVSL +T+MK A+KVRR+G+GN++AGFAGS+ADAFTL
Sbjct: 2 FHGTTILCVRREGKVVIAGDGQVSLDKTIMKNTAKKVRRIGEGNVLAGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KL+++ L R+ VEL KDWR D++LR LEA++++AD+ T +++G GDV+EP++
Sbjct: 62 ERFEAKLKEHQKNLARACVELGKDWRTDRFLRRLEALLIVADREKTFILSGAGDVIEPDH 121
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ A+GSGG YALSAARAL + T SA EIA AM+IAADICVYTN ++ E L
Sbjct: 122 GIAAVGSGGHYALSAARALQAHTSLSAREIATHAMAIAADICVYTNSHVTFEEL 175
>gi|281205293|gb|EFA79485.1| Heat shock protein [Polysphondylium pallidum PN500]
Length = 290
Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
++ ATTIL+VR+ VVI GDGQVS G +++K NA+K+RRL G I+AGFAGS ADAF
Sbjct: 75 PMRKKATTILSVRRGNKVVIIGDGQVSQGHSIVKPNAKKIRRLADGKIVAGFAGSVADAF 134
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E LEKKL ++ LL+S VELA+ WR DKY R LEA +++ADK ITL I G GDVLE
Sbjct: 135 TLFELLEKKLTEHRGLLLKSCVELAQQWRTDKYYRRLEASLIVADKDITLNIDGNGDVLE 194
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKV 187
P +GV+AIGSGG +ALSAARAL++ + AEEIAR++M IAADIC+YTNHN +LET+++
Sbjct: 195 PNDGVLAIGSGGEFALSAARALLTVPDLDAEEIARRSMKIAADICIYTNHNFILETIEI 253
>gi|325183742|emb|CCA18201.1| ATPdependent protease hslV putative [Albugo laibachii Nc14]
Length = 221
Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 140/175 (80%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MH TTIL V+K+G V + GDGQVSLG TV+K NA+KVRR+ I+AGFAGS+ADAFTL+
Sbjct: 45 MHGTTILCVKKEGKVCLIGDGQVSLGHTVVKPNAKKVRRIND-TILAGFAGSTADAFTLM 103
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++P QL R+ VELAK+WRMDKYLR+LEA+++++D + +TG GDV+EP +
Sbjct: 104 ERLESKLEEHPGQLTRACVELAKNWRMDKYLRHLEAILIVSDLEQSYTLTGNGDVVEPHD 163
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
G++ GSGG YAL+AARAL+ AE + RKAM+IAADICVYTNHN V+E L+
Sbjct: 164 GIIGTGSGGHYALAAARALIDQPGLDAEAVGRKAMNIAADICVYTNHNFVVEILE 218
>gi|189028443|sp|A9KH30|HSLV_COXBN RecName: Full=ATP-dependent protease subunit HslV
Length = 181
Score = 227 bits (579), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 139/175 (79%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL G +IAGFAG +ADAFTL
Sbjct: 3 QFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD +L+ITG+GDV+EPE
Sbjct: 63 FERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+MAIGSGGS+A +AA+AL+ +T+ SA +I KA++IAADIC+YTN N +E L
Sbjct: 123 QSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNQNFTIEEL 177
>gi|83950790|ref|ZP_00959523.1| ATP-dependent protease peptidase subunit [Roseovarius nubinhibens
ISM]
gi|83838689|gb|EAP77985.1| ATP-dependent protease peptidase subunit [Roseovarius nubinhibens
ISM]
Length = 185
Score = 227 bits (578), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 119/174 (68%), Positives = 143/174 (82%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI+ VRK G VVIAGDGQVSLGQTV+K +ARKVRRL G +++AGFAGS+ADAFTL
Sbjct: 10 HGTTIIGVRKGGEVVIAGDGQVSLGQTVIKGSARKVRRLSPGGFDVVAGFAGSTADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D VITG GDVLEPE
Sbjct: 70 LERLEAKLEASPGQLQRASVELAKDWRTDKYLQKLEAMLIVTDGQDLYVITGAGDVLEPE 129
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG++AL+AARA+M + SAEE+AR AM+IAADICVYTN N+ +E++
Sbjct: 130 HDVTAIGSGGNFALAAARAMMDSDKSAEEVARAAMAIAADICVYTNGNLTVESI 183
>gi|114769761|ref|ZP_01447371.1| ATP-dependent protease peptidase subunit [alpha proteobacterium
HTCC2255]
gi|114549466|gb|EAU52348.1| ATP-dependent protease peptidase subunit [alpha proteobacterium
HTCC2255]
gi|161170257|gb|ABX59227.1| ATP-dependent protease HslVU ClpYQ peptidase subunit [uncultured
marine bacterium EB000_55B11]
gi|297183786|gb|ADI19909.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 221
Score = 227 bits (578), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 142/174 (81%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI+ V+K VVIAGDGQVSLG TV+K +A+KVRR+ G ++I GFAGS+ADAFTL
Sbjct: 46 HGTTIIGVKKGDDVVIAGDGQVSLGNTVIKGSAKKVRRISPGGHDVICGFAGSTADAFTL 105
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL ++S+ LAKDWRMDKYL+NLEAM+++ D + VITG GDVLEPE
Sbjct: 106 LERLEAKLEASPGQLAKASISLAKDWRMDKYLKNLEAMLIVTDGSDIFVITGAGDVLEPE 165
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG++AL+AARAL+ ++ AE IA+K+++IAA+ICV+TN N+ +E +
Sbjct: 166 HGIAAIGSGGNFALAAARALIDSEQDAEAIAKKSLTIAAEICVFTNGNMTVEKI 219
>gi|209364281|ref|YP_001425417.2| ATP-dependent protease peptidase subunit [Coxiella burnetii Dugway
5J108-111]
gi|207082214|gb|ABS76743.2| ATP-dependent endopeptidase hsl proteolytic subunit [Coxiella
burnetii Dugway 5J108-111]
Length = 204
Score = 226 bits (577), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 139/175 (79%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL G +IAGFAG +ADAFTL
Sbjct: 26 QFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTADAFTL 85
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD +L+ITG+GDV+EPE
Sbjct: 86 FERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGDVIEPE 145
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+MAIGSGGS+A +AA+AL+ +T+ SA +I KA++IAADIC+YTN N +E L
Sbjct: 146 QSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNQNFTIEEL 200
>gi|56698691|ref|YP_169068.1| ATP-dependent protease peptidase subunit [Ruegeria pomeroyi DSS-3]
gi|81558231|sp|Q5LLP2|HSLV_SILPO RecName: Full=ATP-dependent protease subunit HslV
gi|56680428|gb|AAV97094.1| ATP-dependent protease hslV [Ruegeria pomeroyi DSS-3]
Length = 185
Score = 226 bits (577), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 120/184 (65%), Positives = 145/184 (78%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D + H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G +++AGF
Sbjct: 1 MADDQFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGYHVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM++++D VI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGQDMFVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AARA+M + SAEE+AR AM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARAMMDSDKSAEEVARAAMAIAADICVYTNGNLT 179
Query: 182 LETL 185
+E +
Sbjct: 180 VEKI 183
>gi|87200648|ref|YP_497905.1| ATP-dependent protease peptidase subunit [Novosphingobium
aromaticivorans DSM 12444]
gi|87136329|gb|ABD27071.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Novosphingobium aromaticivorans DSM 12444]
Length = 185
Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 147/178 (82%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H ++ H TTI+ V+K+G VIAGDGQVS+G TVMK NARKVRR+G G +IAGFAG++AD
Sbjct: 8 HGLIQWHGTTIIGVKKNGRTVIAGDGQVSMGNTVMKPNARKVRRIGDGKVIAGFAGATAD 67
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ERLE+KLEQ+ QL+R++VELAKDWR DKYLRNLEA++++AD L++TG GDV
Sbjct: 68 AFTLFERLERKLEQHRGQLMRAAVELAKDWRTDKYLRNLEALMIVADADTMLILTGNGDV 127
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE G+ AIGSGG+YAL+AA+AL ++ AE+IAR+AM +AA++CV+TN + LE +
Sbjct: 128 LEPEGGIAAIGSGGNYALAAAKALGDYEDDAEKIARRAMQVAAEVCVFTNDRVTLEEI 185
>gi|330800877|ref|XP_003288459.1| hypothetical protein DICPUDRAFT_34073 [Dictyostelium purpureum]
gi|325081518|gb|EGC35031.1| hypothetical protein DICPUDRAFT_34073 [Dictyostelium purpureum]
Length = 330
Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 138/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+M +TTIL+VR++G VVI GDGQ +LG +++K NA+K+R+L G IIAGFAGS DAFTL
Sbjct: 64 RMKSTTILSVRRNGKVVIIGDGQCTLGHSIVKPNAKKIRKLADGKIIAGFAGSVGDAFTL 123
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E LEKKL ++ LL+S VELA+ WR DKY R LEA I++ADK ITL + G GDVLEP
Sbjct: 124 FELLEKKLAEHRGLLLKSCVELAQQWRTDKYYRRLEASIIVADKDITLTLDGNGDVLEPN 183
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG +ALSAARAL++ + EEIA+++M IAADIC+YTNHN V+E L
Sbjct: 184 DGILAIGSGGDFALSAARALLTVPDIDPEEIAKRSMKIAADICIYTNHNFVMEVL 238
>gi|51473514|ref|YP_067271.1| ATP-dependent protease peptidase subunit [Rickettsia typhi str.
Wilmington]
gi|85542207|sp|Q68X53|HSLV_RICTY RecName: Full=ATP-dependent protease subunit HslV
gi|51459826|gb|AAU03789.1| heat shock protein ATP dependent protease HslV [Rickettsia typhi
str. Wilmington]
Length = 182
Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 140/173 (80%), Gaps = 2/173 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TTIL ++K+ ++IA DGQVS G TV+K+ ARK+R + II GFAGS+AD L
Sbjct: 7 LHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIVGFAGSTADGLALF 66
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+LE K+EQY + LLRS+VELAKDWR DKYLR LEAM+++AD++ L++TG GDV+EPEN
Sbjct: 67 EKLEIKIEQYNSNLLRSAVELAKDWRNDKYLRRLEAMMIVADRSHILILTGNGDVIEPEN 126
Query: 133 GVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLE 183
+ AIGSGG +ALSAARALMS +N +AEEIA K+M+IAAD+CV++NHNI++E
Sbjct: 127 NIAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIME 179
>gi|161831128|ref|YP_001595965.1| ATP-dependent protease peptidase subunit [Coxiella burnetii RSA
331]
gi|189028444|sp|A9N9F9|HSLV_COXBR RecName: Full=ATP-dependent protease subunit HslV
gi|161762995|gb|ABX78637.1| ATP-dependent protease hslV [Coxiella burnetii RSA 331]
Length = 181
Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 139/175 (79%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL G +IAGFAG +ADAFTL
Sbjct: 3 QFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD +L+ITG+GDV+EPE
Sbjct: 63 FERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+MAIGSGGS+A +AA+AL+ +T+ SA +I KA++IAADIC+YTN N +E L
Sbjct: 123 QSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNLNFTIEEL 177
>gi|67458907|ref|YP_246531.1| ATP-dependent protease peptidase subunit [Rickettsia felis
URRWXCal2]
gi|75536652|sp|Q4UM54|HSLV_RICFE RecName: Full=ATP-dependent protease subunit HslV
gi|67004440|gb|AAY61366.1| Heat shock protein HslV [Rickettsia felis URRWXCal2]
Length = 182
Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 140/173 (80%), Gaps = 2/173 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TTIL ++K+ ++IA DGQVS G T++K+ ARK+R + IIAGFAGS+AD L
Sbjct: 7 LHGTTILCLKKNEEIIIAADGQVSHGNTILKSTARKLRTIANNKIIAGFAGSTADGLALF 66
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+LE K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD+ L++TG GDV+EPEN
Sbjct: 67 EKLEVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRNHILILTGNGDVVEPEN 126
Query: 133 GVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLE 183
V AIGSGG +ALSAARALMS +N +AEEIA K+M+IAAD+CV++NHNI++E
Sbjct: 127 NVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIME 179
>gi|153206905|ref|ZP_01945723.1| ATP-dependent protease hslV [Coxiella burnetii 'MSU Goat Q177']
gi|165918152|ref|ZP_02218238.1| ATP-dependent protease hslV [Coxiella burnetii RSA 334]
gi|47605679|sp|Q83A95|HSLV_COXBU RecName: Full=ATP-dependent protease subunit HslV
gi|120576978|gb|EAX33602.1| ATP-dependent protease hslV [Coxiella burnetii 'MSU Goat Q177']
gi|165918012|gb|EDR36616.1| ATP-dependent protease hslV [Coxiella burnetii RSA 334]
Length = 181
Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 139/175 (79%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL G +IAGFAG +ADAFTL
Sbjct: 3 QFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD +L+ITG+GDV+EPE
Sbjct: 63 FERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+MAIGSGGS+A +AA+AL+ +T+ SA +I KA++IAADIC+YTN N +E L
Sbjct: 123 QSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNLNFTIEEL 177
>gi|23014724|ref|ZP_00054526.1| COG5405: ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 182
Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 146/173 (84%), Gaps = 1/173 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL +RK G VVIAGDGQVSLG TV+K NARKVR++G +I+ GFAG++ADAFTLLE
Sbjct: 10 HGTTILCLRKSGRVVIAGDGQVSLGATVIKGNARKVRKVGNDSILVGFAGATADAFTLLE 69
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLE++P QL R+ VELAKDWR D+YLR LEAM+ +ADK ++LV+TG GDVLEPE+G
Sbjct: 70 RLEAKLEKHPGQLTRACVELAKDWRTDRYLRRLEAMMAVADKDVSLVLTGQGDVLEPEDG 129
Query: 134 VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
++ IGSGG+YAL+AARAL+ + AE IARKAM+IAA ICVYTN N+++E+L
Sbjct: 130 IIGIGSGGNYALAAARALIDIEGLDAETIARKAMAIAAGICVYTNGNMIVESL 182
>gi|239947567|ref|ZP_04699320.1| ATP-dependent protease HslVU, peptidase subunit [Rickettsia
endosymbiont of Ixodes scapularis]
gi|239921843|gb|EER21867.1| ATP-dependent protease HslVU, peptidase subunit [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 182
Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 141/173 (81%), Gaps = 2/173 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TTIL ++K+ ++IA DGQVS G TV+K+ ARK+R + IIAGFAGS+AD L
Sbjct: 7 LHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTADGLALF 66
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+LE ++EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD++ L++TG GDV+EPEN
Sbjct: 67 EKLEVRIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGDVVEPEN 126
Query: 133 GVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLE 183
V AIGSGG +ALSAARALMS +N +AEEIA K+M+IAAD+CV++NHNI++E
Sbjct: 127 NVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIME 179
>gi|15604187|ref|NP_220702.1| ATP-dependent protease peptidase subunit [Rickettsia prowazekii
str. Madrid E]
gi|11133247|sp|Q9ZDK9|HSLV_RICPR RecName: Full=ATP-dependent protease subunit HslV
gi|3860879|emb|CAA14779.1| HEAT SHOCK PROTEIN HSLV (hslV) [Rickettsia prowazekii]
gi|292571920|gb|ADE29835.1| Heat shock protein HslV [Rickettsia prowazekii Rp22]
Length = 182
Score = 225 bits (574), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 139/173 (80%), Gaps = 2/173 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TTIL ++K ++IA DGQVS G TV+K+ ARK+R + II GFAGS+AD L
Sbjct: 7 LHGTTILCLKKKEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIVGFAGSTADGLALF 66
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+LE K+EQY + LLRS+VELAKDWR DKYLR LEAM+++AD++ L++TG GDV+EPEN
Sbjct: 67 EKLEIKIEQYNSNLLRSAVELAKDWRNDKYLRRLEAMMIVADRSHILILTGNGDVIEPEN 126
Query: 133 GVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLE 183
V AIGSGG +ALSAARALMS +N +AEEIA K+M+IAAD+CV++NHNI++E
Sbjct: 127 NVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIME 179
>gi|212219519|ref|YP_002306306.1| ATP-dependent protease peptidase subunit [Coxiella burnetii
CbuK_Q154]
gi|212013781|gb|ACJ21161.1| ATP-dependent endopeptidase hsl proteolytic subunit [Coxiella
burnetii CbuK_Q154]
Length = 204
Score = 225 bits (574), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 139/175 (79%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL G +IAGFAG +ADAFTL
Sbjct: 26 QFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTADAFTL 85
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD +L+ITG+GDV+EPE
Sbjct: 86 FERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGDVIEPE 145
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+MAIGSGGS+A +AA+AL+ +T+ SA +I KA++IAADIC+YTN N +E L
Sbjct: 146 QSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNLNFTIEEL 200
>gi|212213471|ref|YP_002304407.1| ATP-dependent protease peptidase subunit [Coxiella burnetii
CbuG_Q212]
gi|215919319|ref|NP_820986.2| ATP-dependent protease peptidase subunit [Coxiella burnetii RSA
493]
gi|206584204|gb|AAO91500.2| ATP-dependent endopeptidase hsl proteolytic subunit [Coxiella
burnetii RSA 493]
gi|212011881|gb|ACJ19262.1| ATP-dependent endopeptidase hsl proteolytic subunit [Coxiella
burnetii CbuG_Q212]
Length = 204
Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 139/175 (79%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL G +IAGFAG +ADAFTL
Sbjct: 26 QFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTADAFTL 85
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD +L+ITG+GDV+EPE
Sbjct: 86 FERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGDVIEPE 145
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+MAIGSGGS+A +AA+AL+ +T+ SA +I KA++IAADIC+YTN N +E L
Sbjct: 146 QSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNLNFTIEEL 200
>gi|157825562|ref|YP_001493282.1| ATP-dependent protease peptidase subunit [Rickettsia akari str.
Hartford]
gi|166222993|sp|A8GMZ9|HSLV_RICAH RecName: Full=ATP-dependent protease subunit HslV
gi|157799520|gb|ABV74774.1| ATP-dependent protease peptidase subunit [Rickettsia akari str.
Hartford]
Length = 182
Score = 224 bits (572), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 140/173 (80%), Gaps = 2/173 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TTIL ++K+ ++IA DGQVS G TV+K+ ARK+R + IIAGFAGS+AD L
Sbjct: 7 LHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTADGLALF 66
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+LE K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++ D++ L++TG GDV+EPEN
Sbjct: 67 EKLEVKIEQHKHNLLRSAVELAKDWRNDKYLRRLEAMMIVGDRSHILILTGNGDVVEPEN 126
Query: 133 GVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLE 183
V AIGSGG +ALSAARALMS +N +AEEIA K+M+IAAD+CV++NHNI++E
Sbjct: 127 NVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIME 179
>gi|294953411|ref|XP_002787750.1| ATP-dependent protease hslV, putative [Perkinsus marinus ATCC
50983]
gi|239902774|gb|EER19546.1| ATP-dependent protease hslV, putative [Perkinsus marinus ATCC
50983]
Length = 198
Score = 224 bits (572), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/172 (64%), Positives = 138/172 (80%), Gaps = 1/172 (0%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
+TTILTVRK VVI GDGQV+LG ++K N RK+RR+ NIIAGFAGS+AD L+++
Sbjct: 23 STTILTVRKGPDVVIMGDGQVTLGDMIIKDNVRKLRRIND-NIIAGFAGSTADCLALMDK 81
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE++P QLLRS VELAK WR DK LR+L+A+IL+AD+ ITL +TG GDVLE ++G+
Sbjct: 82 LEGKLEEHPQQLLRSCVELAKMWRTDKILRHLQAVILVADENITLEVTGNGDVLEAKDGI 141
Query: 135 MAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YAL+AARAL+ T+ +A EI KAM IAADICV+TNHN +ETLK
Sbjct: 142 FAIGSGGPYALAAARALIDTELTAHEICEKAMKIAADICVHTNHNFAVETLK 193
>gi|157964395|ref|YP_001499219.1| ATP-dependent protease peptidase subunit [Rickettsia massiliae
MTU5]
gi|157844171|gb|ABV84672.1| Heat shock protein HslV [Rickettsia massiliae MTU5]
Length = 190
Score = 224 bits (572), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/183 (59%), Positives = 144/183 (78%), Gaps = 5/183 (2%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+M D + +H TTIL ++K+ ++IA DGQVS G TV+K+ ARK+R + IIAGFA
Sbjct: 8 IMSDN---LALHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFA 64
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
GS+AD L E+L K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD++ L++T
Sbjct: 65 GSTADGLALFEKLAVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILT 124
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNI 180
G GDV+EPEN V AIGSGG +ALSAARALMS +N +AEEIA K+M+IAAD+CV++NHNI
Sbjct: 125 GNGDVVEPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNI 184
Query: 181 VLE 183
++E
Sbjct: 185 IME 187
>gi|15892356|ref|NP_360070.1| ATP-dependent protease peptidase subunit [Rickettsia conorii str.
Malish 7]
gi|34580639|ref|ZP_00142119.1| heat shock protein HslV [Rickettsia sibirica 246]
gi|157828308|ref|YP_001494550.1| ATP-dependent protease peptidase subunit [Rickettsia rickettsii
str. 'Sheila Smith']
gi|165933014|ref|YP_001649803.1| ATP-dependent protease subunit HslV [Rickettsia rickettsii str.
Iowa]
gi|229586581|ref|YP_002845082.1| ATP-dependent protease peptidase subunit [Rickettsia africae ESF-5]
gi|21759187|sp|Q92II7|HSLV_RICCN RecName: Full=ATP-dependent protease subunit HslV
gi|166222996|sp|A8GRL7|HSLV_RICRS RecName: Full=ATP-dependent protease subunit HslV
gi|189036235|sp|B0BX21|HSLV_RICRO RecName: Full=ATP-dependent protease subunit HslV
gi|259491396|sp|C3PN29|HSLV_RICAE RecName: Full=ATP-dependent protease subunit HslV
gi|15619503|gb|AAL02971.1| heat shock protein HslV [Rickettsia conorii str. Malish 7]
gi|28262024|gb|EAA25528.1| heat shock protein HslV [Rickettsia sibirica 246]
gi|157800789|gb|ABV76042.1| ATP-dependent protease peptidase subunit [Rickettsia rickettsii
str. 'Sheila Smith']
gi|165908101|gb|ABY72397.1| ATP-dependent endopeptidase hsl proteolytic subunit [Rickettsia
rickettsii str. Iowa]
gi|228021631|gb|ACP53339.1| Heat shock protein HslV [Rickettsia africae ESF-5]
Length = 182
Score = 224 bits (571), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 141/175 (80%), Gaps = 2/175 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ +H TTIL ++K+ ++IA DGQVS G TV+K+ ARK+R + IIAGFAGS+AD
Sbjct: 5 LSLHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTADGLA 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+L K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD++ L++TG GDV+EP
Sbjct: 65 LFEKLAVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGDVVEP 124
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLE 183
EN V AIGSGG +ALSAARALMS +N +AEEIA K+M+IAAD+CV++NHNI++E
Sbjct: 125 ENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIME 179
>gi|311693357|gb|ADP96230.1| ATP-dependent protease peptidase subunit [marine bacterium HP15]
Length = 176
Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR+D V + GDGQVSLG TVMK NARKVRRL G +IAGFAG +ADAFTL ER
Sbjct: 2 TTILSVRRDDEVAMGGDGQVSLGNTVMKGNARKVRRLYNGQVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L R++VELAKDWR D+ LR LEA++ +ADKT +L+ITG GDV+EPE G++
Sbjct: 62 EAQLEKHQGNLTRAAVELAKDWRTDRALRRLEALLAVADKTASLIITGNGDVIEPEQGLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AIGSGG +A ++ARAL+ +T SA EI K + IAADIC+YTNHN LE L D
Sbjct: 122 AIGSGGPFAQASARALLENTDLSAHEIVEKGLDIAADICIYTNHNRTLEVLSKND 176
>gi|84684627|ref|ZP_01012528.1| ATP-dependent protease peptidase subunit [Maritimibacter
alkaliphilus HTCC2654]
gi|84667606|gb|EAQ14075.1| ATP-dependent protease peptidase subunit [Rhodobacterales bacterium
HTCC2654]
Length = 183
Score = 224 bits (570), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 124/176 (70%), Positives = 140/176 (79%), Gaps = 2/176 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
H TTI VRK G VVIAGDGQVSLG TV+K ARKVRRL G +IIAGFAGS+ADAFTL
Sbjct: 8 HGTTICGVRKGGEVVIAGDGQVSLGDTVIKGTARKVRRLSPGGYDIIAGFAGSTADAFTL 67
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R+ VELAKDWR DKYL+ LEAM++++D V+TG GDVLEPE
Sbjct: 68 LERLETKLEATPGQLARACVELAKDWRTDKYLQKLEAMLIVSDGKDLFVVTGAGDVLEPE 127
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
+ V AIGSGG+YAL+A RA+M T SAEEIAR AM+IAADICVYTN N+ LETLK
Sbjct: 128 HDVAAIGSGGNYALAAGRAMMDTDKSAEEIARAAMAIAADICVYTNGNLTLETLKT 183
>gi|120553751|ref|YP_958102.1| ATP-dependent protease peptidase subunit [Marinobacter aquaeolei
VT8]
gi|166222985|sp|A1TYU6|HSLV_MARAV RecName: Full=ATP-dependent protease subunit HslV
gi|120323600|gb|ABM17915.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Marinobacter aquaeolei VT8]
Length = 176
Score = 224 bits (570), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ V + GDGQVSLG TVMK NARKVRRL G +IAGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRENEVAMGGDGQVSLGNTVMKGNARKVRRLYNGQVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L R++VELAKDWR D+ LR LEA++ +ADKT +L+ITG GDV+EPE G++
Sbjct: 62 EAQLEKHQGNLTRAAVELAKDWRTDRALRKLEALLAVADKTASLIITGNGDVIEPEQGLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AIGSGG +A +AARAL+ +T+ SA EIA KA+ IA DIC+YTN N LE L + D
Sbjct: 122 AIGSGGPFAQAAARALLENTELSAHEIAEKALEIAGDICIYTNQNRTLEVLPIKD 176
>gi|52840877|ref|YP_094676.1| ATP-dependent protease peptidase subunit [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|54296663|ref|YP_123032.1| ATP-dependent protease peptidase subunit [Legionella pneumophila
str. Paris]
gi|148360706|ref|YP_001251913.1| heat shock protein HslVU [Legionella pneumophila str. Corby]
gi|296106228|ref|YP_003617928.1| heat shock protein [Legionella pneumophila 2300/99 Alcoy]
gi|81378038|sp|Q5ZXU1|HSLV_LEGPH RecName: Full=ATP-dependent protease subunit HslV
gi|81601974|sp|Q5X7B1|HSLV_LEGPA RecName: Full=ATP-dependent protease subunit HslV
gi|166222984|sp|A5IGR7|HSLV_LEGPC RecName: Full=ATP-dependent protease subunit HslV
gi|52627988|gb|AAU26729.1| heat shock protein, HslVU, proteasome-related peptidase subunit
[Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|53750448|emb|CAH11842.1| Peptidase component of the HslUV protease (Heat shock protein)
[Legionella pneumophila str. Paris]
gi|148282479|gb|ABQ56567.1| heat shock protein, HslVU, proteasome-related peptidase subunit
[Legionella pneumophila str. Corby]
gi|158512134|gb|ABW69095.1| ATP-dependent protease peptidase subunit [Legionella pneumophila]
gi|295648129|gb|ADG23976.1| heat shock protein [Legionella pneumophila 2300/99 Alcoy]
gi|307609438|emb|CBW98928.1| peptidase component of the HslUV protease [Legionella pneumophila
130b]
Length = 182
Score = 224 bits (570), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 138/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ VVI GDGQV+LG TVMK NARKVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QFHGTTILSVRRGNQVVIGGDGQVTLGNTVMKGNARKVRRLYKDKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE + L+R++VELAKDWR D+ LR LEA++ +AD +L+ITG GDV+EPE
Sbjct: 63 FERFEAKLEMHQGHLIRAAVELAKDWRTDRILRRLEAVLAVADSKASLIITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++AIGSGG +A +AARALM +TQ SA+EI +KA++IA DIC+YTN+N+ +E L
Sbjct: 123 ESLIAIGSGGPFAQAAARALMENTQLSAKEIVQKALTIAGDICIYTNNNLTIEEL 177
>gi|326385661|ref|ZP_08207291.1| ATP-dependent protease peptidase subunit [Novosphingobium
nitrogenifigens DSM 19370]
gi|326209819|gb|EGD60606.1| ATP-dependent protease peptidase subunit [Novosphingobium
nitrogenifigens DSM 19370]
Length = 195
Score = 223 bits (569), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 118/188 (62%), Positives = 146/188 (77%), Gaps = 10/188 (5%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG------KGNIIAGF 61
H ++ H TTI+ VRK+G VIAGDGQVS+G TVMK NARKVRRLG +G +IAGF
Sbjct: 8 HGLIQWHGTTIIGVRKNGRTVIAGDGQVSMGNTVMKPNARKVRRLGAPGEDGRGKVIAGF 67
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AG++ADAFTL ERLE+KLE + QLLR++VELAKDWR DKYLRNLEA++++AD LV+
Sbjct: 68 AGATADAFTLFERLERKLEAHRGQLLRAAVELAKDWRTDKYLRNLEALMIVADAETLLVL 127
Query: 122 TGMGDVLEPENG----VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTN 177
TG GDVLEPE + AIGSGG+YAL+AARAL ++ AE+IAR+AM +AADICVYTN
Sbjct: 128 TGNGDVLEPEAAGDTVIAAIGSGGNYALAAARALADYESDAEQIARRAMKVAADICVYTN 187
Query: 178 HNIVLETL 185
+ LE +
Sbjct: 188 DRVTLEEI 195
>gi|91205632|ref|YP_537987.1| ATP-dependent protease peptidase subunit [Rickettsia bellii
RML369-C]
gi|157827343|ref|YP_001496407.1| ATP-dependent protease peptidase subunit [Rickettsia bellii OSU
85-389]
gi|122425542|sp|Q1RIB6|HSLV_RICBR RecName: Full=ATP-dependent protease subunit HslV
gi|166222994|sp|A8GWX0|HSLV_RICB8 RecName: Full=ATP-dependent protease subunit HslV
gi|91069176|gb|ABE04898.1| Heat shock protein HslV [Rickettsia bellii RML369-C]
gi|157802647|gb|ABV79370.1| ATP-dependent protease peptidase subunit [Rickettsia bellii OSU
85-389]
Length = 182
Score = 223 bits (569), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 138/173 (79%), Gaps = 2/173 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TTIL ++K+ ++IA DGQVS G TV+K+ ARK+R + IIAGFAGS+AD L
Sbjct: 7 LHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTADGLALF 66
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+LE K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD+ L++TG GDV+EPEN
Sbjct: 67 EKLEVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRNHILILTGNGDVVEPEN 126
Query: 133 GVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLE 183
V AIGSGG +ALSAARALMS N +AEEIA K+M+IAAD+CV++NHNI+ E
Sbjct: 127 NVAAIGSGGLFALSAARALMSYDNPLTAEEIALKSMNIAADLCVFSNHNIITE 179
>gi|296283399|ref|ZP_06861397.1| ATP-dependent protease peptidase subunit [Citromicrobium
bathyomarinum JL354]
Length = 185
Score = 223 bits (569), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 110/178 (61%), Positives = 145/178 (81%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H + H TTI+ V++ V+AGDGQVS+G TVMK NA+KVRR+G G ++AGFAG++AD
Sbjct: 8 HGLQQWHGTTIIGVKRGDKTVLAGDGQVSMGNTVMKPNAKKVRRIGDGKVVAGFAGATAD 67
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ERLE+KL+QY QL+R++VELAKDWR DKYLRNLEA++++ADK LV+TG GDV
Sbjct: 68 AFTLFERLERKLDQYSGQLMRAAVELAKDWRTDKYLRNLEALMIVADKDTMLVLTGNGDV 127
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE G+ AIGSGG+YAL+AARAL + E+IAR+AM++AA++CV+TN + LET+
Sbjct: 128 LEPEGGIAAIGSGGNYALAAARALSDYETDPEKIARRAMAVAAEVCVFTNDQVTLETV 185
>gi|157803952|ref|YP_001492501.1| ATP-dependent protease peptidase subunit [Rickettsia canadensis
str. McKiel]
gi|166222995|sp|A8EZD3|HSLV_RICCK RecName: Full=ATP-dependent protease subunit HslV
gi|157785215|gb|ABV73716.1| hypothetical protein A1E_03945 [Rickettsia canadensis str. McKiel]
Length = 182
Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 140/173 (80%), Gaps = 2/173 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TTIL ++K+ ++IA DGQVS G T++K++ARK+R + IIAGFAGS+AD L
Sbjct: 7 LHGTTILCLKKNEDIIIAADGQVSHGNTILKSSARKLRTIANNKIIAGFAGSTADGLALF 66
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+LE K+E+Y LLRS+VELAKDWR DKYLR LEAM+++AD++ L++TG GDV+EPEN
Sbjct: 67 EKLEAKIEKYSYNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGDVVEPEN 126
Query: 133 GVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLE 183
V AIGSGG +ALSAARALMS +N +AEEIA K+M+IAAD+CV++N NI++E
Sbjct: 127 NVAAIGSGGLFALSAARALMSCENNLTAEEIALKSMNIAADLCVFSNRNIIME 179
>gi|88799637|ref|ZP_01115213.1| ATP-dependent protease peptidase subunit [Reinekea sp. MED297]
gi|88777722|gb|EAR08921.1| ATP-dependent protease peptidase subunit [Reinekea sp. MED297]
Length = 172
Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 137/171 (80%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VR+D VV+AGDGQVSLG TVMK NARKVRRL +IAGFAG +ADAFTL E+
Sbjct: 2 TTIVAVRRDDQVVVAGDGQVSLGNTVMKGNARKVRRLYHNKVIAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E L+Q+ L R++VELAK+WR D+ LR LEAM+++AD +L+I+G GDV+EPE+GV+
Sbjct: 62 ESHLQQHSGHLTRAAVELAKEWRSDRALRRLEAMLIVADAEASLLISGTGDVVEPEHGVV 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YAL+AARAL +T+ A+ IA K++ +AADICVYTNHN V+E L
Sbjct: 122 AIGSGGNYALAAARALFDNTELDAKTIAEKSLDLAADICVYTNHNTVIEAL 172
>gi|301119701|ref|XP_002907578.1| ATP-dependent protease hslV [Phytophthora infestans T30-4]
gi|262106090|gb|EEY64142.1| ATP-dependent protease hslV [Phytophthora infestans T30-4]
Length = 209
Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 145/181 (80%), Gaps = 1/181 (0%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
A MH TTIL VRK+G V + GDGQVSLG TV+K NA+KVRR+G+ +I+AGFAGS+ADAF
Sbjct: 21 APTMHGTTILCVRKNGKVCLIGDGQVSLGHTVVKPNAKKVRRIGE-HIVAGFAGSTADAF 79
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL+ERLE KL++YP QL RS VELAKDWR DKYLR LEA+++++D + +TG GDVLE
Sbjct: 80 TLMERLEAKLDEYPGQLTRSCVELAKDWRTDKYLRRLEAILIVSDINQSYTLTGNGDVLE 139
Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
P +G++ IGSGG+YAL+AARAL+ AE I RKAM IAADICVYTN N+V+E L+ G
Sbjct: 140 PHDGIIGIGSGGTYALAAARALIDQDLDAETIGRKAMKIAADICVYTNGNVVVEMLEEGK 199
Query: 190 E 190
+
Sbjct: 200 D 200
>gi|54293624|ref|YP_126039.1| ATP-dependent protease peptidase subunit [Legionella pneumophila
str. Lens]
gi|81601493|sp|Q5WYQ9|HSLV_LEGPL RecName: Full=ATP-dependent protease subunit HslV
gi|53753456|emb|CAH14911.1| Peptidase component of the HslUV protease (Heat shock protein)
[Legionella pneumophila str. Lens]
Length = 182
Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 138/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ VVI GDGQV+LG TVMK NARKVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QFHGTTILSVRRGNQVVIGGDGQVTLGNTVMKGNARKVRRLYKDKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE + L+R++VELAKDWR D+ LR LEA++ +AD +L+ITG GDV+EPE
Sbjct: 63 FERFEAKLEMHQGHLIRAAVELAKDWRTDRILRRLEAVLAVADSKASLIITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++AIGSGG +A +AARALM +TQ SA+EI +K+++IA DIC+YTN+N+ +E L
Sbjct: 123 ESLIAIGSGGPFAQAAARALMENTQLSAKEIVQKSLTIAGDICIYTNNNLTIEEL 177
>gi|299472682|emb|CBN78334.1| ATP-dependent protease peptidase subunit [Ectocarpus siliculosus]
Length = 212
Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 142/181 (78%), Gaps = 1/181 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
++MH TTIL VRK+G VV+ GDGQVS G V+K NA KVR+LG G ++AG+AGS+ADA T
Sbjct: 28 LEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALT 87
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L+ERLE KLE++ QL+ + V LAKDWR DKYLR LEA++L+AD +L +TG+GDVL P
Sbjct: 88 LMERLEGKLEEHEGQLMNACVALAKDWRTDKYLRRLEAVVLVADSKFSLKVTGLGDVLAP 147
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
GV+A+GSG YAL+AARAL ++ SAEE+ARK+M IA+++CVYTN++ + +L V +
Sbjct: 148 NGGVIAVGSGQPYALAAARALSGQEDLSAEEVARKSMEIASELCVYTNNHFTMHSLDVEE 207
Query: 190 E 190
E
Sbjct: 208 E 208
>gi|152998124|ref|YP_001342959.1| ATP-dependent protease peptidase subunit [Marinomonas sp. MWYL1]
gi|189028452|sp|A6W2U5|HSLV_MARMS RecName: Full=ATP-dependent protease subunit HslV
gi|150839048|gb|ABR73024.1| 20S proteasome A and B subunits [Marinomonas sp. MWYL1]
Length = 183
Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 142/173 (82%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTILTVRK VV+ GDGQVSLG TVMK NARKVRRL +G +IAGFAG +ADAFTL ER
Sbjct: 2 TTILTVRKGNQVVVGGDGQVSLGNTVMKGNARKVRRLYRGEVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++V+LAKDWR D+ LR LEAM+++A+K TL+ITG GDV+EP++G +
Sbjct: 62 EGQLEKHQGHLVRAAVDLAKDWRSDRALRKLEAMLIVANKESTLIITGTGDVVEPQHGAL 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG++A +AARAL+ +T +A+EI K+++IAADICV+TNH++ +E + +
Sbjct: 122 AIGSGGNFAEAAARALIDNTDLTAKEIVEKSLNIAADICVFTNHSLTIEEITI 174
>gi|254787488|ref|YP_003074917.1| ATP-dependent protease peptidase subunit [Teredinibacter turnerae
T7901]
gi|259491398|sp|C5BRK9|HSLV_TERTT RecName: Full=ATP-dependent protease subunit HslV
gi|237685056|gb|ACR12320.1| ATP-dependent protease HslVU, peptidase subunit [Teredinibacter
turnerae T7901]
Length = 179
Score = 222 bits (566), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL++R+ VVI GDGQVSLG T+MK NARKVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTILSIRRGNQVVIGGDGQVSLGNTIMKGNARKVRRLYKNQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE + QL+R++VELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE
Sbjct: 63 FERFEAKLESHGGQLVRAAVELAKDWRTDRALRRLEALLAVADKEASLIITGNGDVIQPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ ++AIGSGG++A SAARAL+ +T+ SA EI +K ++IA DIC+YTNHN +E L+
Sbjct: 123 DDLIAIGSGGAFAQSAARALLDNTELSAREIVQKGLTIAGDICIYTNHNQTIEELE 178
>gi|260428765|ref|ZP_05782742.1| ATP-dependent protease HslV [Citreicella sp. SE45]
gi|260419388|gb|EEX12641.1| ATP-dependent protease HslV [Citreicella sp. SE45]
Length = 185
Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 146/184 (79%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D+ + H TTI+ VRK G VV+AGDGQVSLGQTV+K ARKVRRL G +++ GF
Sbjct: 1 MADQEFP-GWHGTTIIGVRKGGQVVVAGDGQVSLGQTVIKGTARKVRRLSPGGSDVVCGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAF LLERLE KLE+ P QL R+ VELAKDWR DKYL+ LEAM+++ D VI
Sbjct: 60 AGSTADAFALLERLEAKLEKTPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGRELYVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AARA+M ++ SAE+IAR+AM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARAMMDSERSAEDIARRAMAIAADICVYTNGNLT 179
Query: 182 LETL 185
+ET+
Sbjct: 180 VETI 183
>gi|114762243|ref|ZP_01441711.1| ATP-dependent protease peptidase subunit [Pelagibaca bermudensis
HTCC2601]
gi|114545267|gb|EAU48270.1| ATP-dependent protease peptidase subunit [Roseovarius sp. HTCC2601]
Length = 185
Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/184 (63%), Positives = 146/184 (79%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D+ + H TTI+ VRK G VV+AGDGQVSLGQTV+K +ARKVRRL G +++ GF
Sbjct: 1 MADQEFP-GWHGTTIIGVRKGGQVVVAGDGQVSLGQTVIKGSARKVRRLSPGGSDVVCGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAF LLERLE KLE+ P QL R+ VELAKDWR DKYL+ LEAM+++ D VI
Sbjct: 60 AGSTADAFALLERLEAKLEKTPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGRELYVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ + AIGSGG++AL+AAR +M ++ SAEEIAR+AM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDIAAIGSGGNFALAAARGMMDSERSAEEIARRAMAIAADICVYTNGNLT 179
Query: 182 LETL 185
+ET+
Sbjct: 180 VETI 183
>gi|238650767|ref|YP_002916622.1| ATP-dependent protease peptidase subunit [Rickettsia peacockii str.
Rustic]
gi|259491397|sp|C4K1X3|HSLV_RICPU RecName: Full=ATP-dependent protease subunit HslV
gi|238624865|gb|ACR47571.1| ATP-dependent protease peptidase subunit [Rickettsia peacockii str.
Rustic]
Length = 182
Score = 221 bits (564), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 140/175 (80%), Gaps = 2/175 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ +H TTIL ++K+ ++IA DGQVS G TV+K+ ARK+R + IIAGFAGS+AD
Sbjct: 5 LSLHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTADGLA 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+L K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD++ L++TG GDV+EP
Sbjct: 65 LFEKLAVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGDVVEP 124
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLE 183
E V AIGSGG +ALSAARALMS +N +AEEIA K+M+IAAD+CV++NHNI++E
Sbjct: 125 EKNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIME 179
>gi|307546358|ref|YP_003898837.1| ATP-dependent protease peptidase subunit [Halomonas elongata DSM
2581]
gi|307218382|emb|CBV43652.1| ATP-dependent protease peptidase subunit [Halomonas elongata DSM
2581]
Length = 172
Score = 221 bits (564), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 138/171 (80%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ V +AGDGQVSLG TVMK NA KVRRL +G ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGDQVALAGDGQVSLGNTVMKGNASKVRRLYRGQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE+Y L++S+VELAKDWR D+ LR LEA++ +ADK +L+ITG GDV+EPE G++
Sbjct: 62 EAQLEKYQGNLVKSAVELAKDWRTDRALRRLEALLAVADKHASLIITGNGDVVEPERGII 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YAL++ARAL+ +T+ SA EI K++ IA DICV+TNH++ LE L
Sbjct: 122 AIGSGGNYALASARALLENTELSAREITEKSLEIAGDICVFTNHHVTLEEL 172
>gi|87122851|ref|ZP_01078721.1| heat shock protein HslV [Marinomonas sp. MED121]
gi|86161862|gb|EAQ63157.1| heat shock protein HslV [Marinomonas sp. MED121]
Length = 185
Score = 221 bits (564), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 139/173 (80%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTILTVRK VV+ GDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTILTVRKGNQVVVGGDGQVSLGNTVMKGNARKVRRLYHNEVVAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE+Y L+R++VELAKDWR DK LR LEAM+++A+K TL+ITG GDV+EPE+G +
Sbjct: 62 EGQLEKYQGDLVRAAVELAKDWRSDKALRKLEAMLIVANKQSTLIITGNGDVVEPEHGAL 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG+YA ++ARAL+ +T A++I K++ IAADICV+TNH++ +E++ +
Sbjct: 122 AIGSGGNYAEASARALIDNTDLKAQDIVEKSLKIAADICVFTNHSLTVESITI 174
>gi|254284434|ref|ZP_04959402.1| heat shock protein HslV [gamma proteobacterium NOR51-B]
gi|219680637|gb|EED36986.1| heat shock protein HslV [gamma proteobacterium NOR51-B]
Length = 178
Score = 221 bits (563), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 138/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+DG+V I GDGQVS+G TVMK NARKVRRL + +IAGFAG +ADAFTL
Sbjct: 3 QYHGTTIVSVRRDGIVAIGGDGQVSMGNTVMKGNARKVRRLFRDQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E +LE+Y QL R++VELAK WR ++ LR LEA++ +AD+ +L+ITG GDV+EPE
Sbjct: 63 FELFEAQLEKYQGQLTRAAVELAKLWRSERSLRRLEALLAVADRETSLIITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG YA +AARAL+ +T+ AE I RK ++IA DICV+TNHN +ETL
Sbjct: 123 DNLIAIGSGGPYAQAAARALLDNTELGAEAIVRKGLTIAGDICVFTNHNHTIETL 177
>gi|298530976|ref|ZP_07018377.1| 20S proteasome A and B subunits [Desulfonatronospira thiodismutans
ASO3-1]
gi|298508999|gb|EFI32904.1| 20S proteasome A and B subunits [Desulfonatronospira thiodismutans
ASO3-1]
Length = 178
Score = 221 bits (562), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 142/175 (81%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTIL V+K+G + +AGDGQV++GQ+ VMK ARKVRR+ K +++AGFAG++ADAFTL
Sbjct: 3 FEGTTILAVKKNGRIAMAGDGQVTMGQSIVMKHTARKVRRMYKDSVLAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE+Y LLR+SVELAK+WRMDKYLR LEA++++ADK L+I+G GDV+EP+
Sbjct: 63 FERFEAKLEEYRGNLLRASVELAKEWRMDKYLRRLEALLVVADKENVLIISGTGDVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG YAL+A+RAL+ +T+ SAE+I + M IAA ICVYTN+NIV E +
Sbjct: 123 DGIAAIGSGGPYALAASRALVDNTELSAEDIVNQGMQIAARICVYTNNNIVTEKI 177
>gi|71905845|ref|YP_283432.1| ATP-dependent protease peptidase subunit [Dechloromonas aromatica
RCB]
gi|123628365|sp|Q47JL9|HSLV_DECAR RecName: Full=ATP-dependent protease subunit HslV
gi|71845466|gb|AAZ44962.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Dechloromonas aromatica RCB]
Length = 178
Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG V+KA ARKVRRL G I+AGFAG +ADAFTL
Sbjct: 3 QYHGTTILSVRRGNSVAMGGDGQVTLGNIVIKATARKVRRLYNGRILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+++ LLRS+VELAKDWR D+ LR LEAM+ +AD+ ++L+ITG GDVLEPE
Sbjct: 63 FERFEAKLDKHQGNLLRSAVELAKDWRSDRALRRLEAMLSVADREVSLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G++AIGSGGSYA SAARAL+ +T+ + +I K++ IA DIC+YTN N LE L+
Sbjct: 123 QGIVAIGSGGSYAQSAARALLENTELAPRDIVTKSLEIAGDICIYTNRNFTLEVLE 178
>gi|78484755|ref|YP_390680.1| ATP-dependent protease peptidase subunit [Thiomicrospira crunogena
XCL-2]
gi|123555943|sp|Q31IL7|HSLV_THICR RecName: Full=ATP-dependent protease subunit HslV
gi|78363041|gb|ABB41006.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
family T01B [Thiomicrospira crunogena XCL-2]
Length = 183
Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL +++G +VI GDGQV+LG VMK NARKVRRL G I+AGFAG++ADAFTL
Sbjct: 6 FHGTTILCAKRNGEMVIGGDGQVTLGHVVMKGNARKVRRLFNGKILAGFAGATADAFTLF 65
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KL+ + QL+R++VE+AKDWR D+ LR LEAM+L+AD L+I+G GDV+EP +
Sbjct: 66 ERFEGKLQTHNGQLMRAAVEMAKDWRTDRALRKLEAMMLVADADNMLLISGTGDVIEPAH 125
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
++IGSGGSYA SAA+ALM +T SA+++ KA++IAAD+C+YTNHN+ +E+L D
Sbjct: 126 DFISIGSGGSYAHSAAQALMENTDLSAKDVVEKALNIAADLCIYTNHNLTIESLNKED 183
>gi|307942726|ref|ZP_07658071.1| ATP-dependent protease HslVU, peptidase subunit [Roseibium sp.
TrichSKD4]
gi|307773522|gb|EFO32738.1| ATP-dependent protease HslVU, peptidase subunit [Roseibium sp.
TrichSKD4]
Length = 186
Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/176 (69%), Positives = 143/176 (81%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ VRK G VVIAGDGQVSLG TV+K ARKVR L KG +IAGFAG++ADAFTL E
Sbjct: 11 HGTTIVMVRKGGEVVIAGDGQVSLGPTVIKHTARKVRPLAKGKVIAGFAGATADAFTLFE 70
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+ADK +L +TG GDVLEPE G
Sbjct: 71 RLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKNTSLALTGTGDVLEPEGG 130
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
VM IGSGG+YAL+AA+AL T AE IARKAM++AADICVYTN ++ +E LK D
Sbjct: 131 VMGIGSGGNYALAAAKALADTDADAETIARKAMAVAADICVYTNDSVTVEKLKAAD 186
>gi|124002741|ref|ZP_01687593.1| ATP-dependent protease HslV [Microscilla marina ATCC 23134]
gi|123991969|gb|EAY31356.1| ATP-dependent protease HslV [Microscilla marina ATCC 23134]
Length = 178
Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 136/176 (77%), Gaps = 2/176 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+HATT+L + +G V I DGQ ++G TV K+N RK+R+L GNI+AGFAGS+ADAFTL
Sbjct: 3 KIHATTVLAIVHNGEVAIGADGQATMGNTVAKSNVRKIRKLSDGNILAGFAGSTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ER ++KL Y + R+++ELAKDWR D+YLR LEAM++ A K LVI+G GDVLEP+
Sbjct: 63 IERFDEKLNAYGKNMKRAAIELAKDWRTDRYLRRLEAMLITASKDEVLVISGTGDVLEPD 122
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
NG+ +IGSG YA SAA AL STQ +AEE+ ++++ IAADIC+YTNHNI+LE L
Sbjct: 123 NGIASIGSGSMYAQSAATALKKHSTQMTAEEMVKESLHIAADICIYTNHNIILEKL 178
>gi|88606825|ref|YP_505626.1| ATP-dependent protease peptidase subunit [Anaplasma phagocytophilum
HZ]
gi|123494508|sp|Q2GJ25|HSLV_ANAPZ RecName: Full=ATP-dependent protease subunit HslV
gi|88597888|gb|ABD43358.1| ATP-dependent protease HslV [Anaplasma phagocytophilum HZ]
Length = 189
Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 147/181 (81%), Gaps = 6/181 (3%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
KM+ TTIL++R+ V++AGDGQV+LG T+MK +ARK++RL +I GFAG++ADAFTL
Sbjct: 8 KMYGTTILSIRRGNSVIVAGDGQVTLGSTIMKTSARKIKRLASNTVITGFAGATADAFTL 67
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERLE KLE++P QL+R+ VELAKDWR DKYLR LEAM+++ADK+++LVI+G GDVLEPE
Sbjct: 68 FERLEGKLEKHPGQLMRACVELAKDWRQDKYLRRLEAMMIVADKSVSLVISGGGDVLEPE 127
Query: 132 NGVMAIGSGGSYALSAARALMSTQN------SAEEIARKAMSIAADICVYTNHNIVLETL 185
NG+ AIGSGG+ AL+AARAL + Q+ E I K+M+IAA+IC+YTN+NIV+E +
Sbjct: 128 NGIAAIGSGGNLALAAARALCAAQDEFAPAMPLEYIVAKSMAIAAEICIYTNNNIVMEKI 187
Query: 186 K 186
+
Sbjct: 188 E 188
>gi|119505530|ref|ZP_01627602.1| ATP-dependent protease peptidase subunit [marine gamma
proteobacterium HTCC2080]
gi|119458639|gb|EAW39742.1| ATP-dependent protease peptidase subunit [marine gamma
proteobacterium HTCC2080]
Length = 178
Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 136/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+DG V I GDGQVS+G TVMK NARKVRRL + ++IAGFAG +ADAFTL
Sbjct: 3 QFHGTTIVSVRRDGQVAIGGDGQVSMGNTVMKGNARKVRRLYRDSVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E +LE+Y QL R++VELAK WR ++ LR LEA++ +AD +L+ITG GDV+EPE
Sbjct: 63 FELFEAQLEKYQGQLTRAAVELAKLWRSERALRRLEALLAVADLDTSLIITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
N ++AIGSGG YA +AA AL +T SAEEI K++SIA DICV+TNHN +ETL
Sbjct: 123 NSLIAIGSGGPYAQAAAHALTENTTLSAEEIVTKSLSIAGDICVFTNHNQTIETL 177
>gi|148927583|ref|ZP_01811055.1| ATP-dependent protease peptidase subunit [candidate division TM7
genomosp. GTL1]
gi|147887070|gb|EDK72566.1| ATP-dependent protease peptidase subunit [candidate division TM7
genomosp. GTL1]
Length = 181
Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 142/177 (80%), Gaps = 1/177 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+++ TTI++VR++G+VV+ GDGQV+LG T+MK+NARKVRRL I+AGFAG++ADAFT
Sbjct: 5 IELRGTTIVSVRRNGMVVVGGDGQVTLGNTIMKSNARKVRRLYNNKILAGFAGATADAFT 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ER E KLE + L+RS+VELAKDWR DK LR LEAM+++AD +L+I+G GDV+EP
Sbjct: 65 LFERFESKLETHQGNLVRSAVELAKDWRTDKMLRRLEAMLVVADAKASLIISGNGDVIEP 124
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
EN ++AIGSGG +A AA+AL+ +T+ +A +I KA++IAA+ C+YTN N +ETL+
Sbjct: 125 ENSLIAIGSGGPFAKCAAQALLENTKLNARDITEKALTIAANTCIYTNTNFTIETLE 181
>gi|54307475|ref|YP_128495.1| ATP-dependent protease peptidase subunit [Photobacterium profundum
SS9]
gi|90413624|ref|ZP_01221614.1| ATP-dependent protease peptidase subunit [Photobacterium profundum
3TCK]
gi|62288342|sp|Q6LVI2|HSLV_PHOPR RecName: Full=ATP-dependent protease subunit HslV
gi|46911895|emb|CAG18693.1| putative protease HslVU, subunit HslV [Photobacterium profundum
SS9]
gi|90325397|gb|EAS41886.1| ATP-dependent protease peptidase subunit [Photobacterium profundum
3TCK]
Length = 175
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + LL+S+VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAILAVADETGSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A +AA AL+ +T A EIA K+++IA DICV+TNHN +E L+
Sbjct: 122 AIGSGGNFAQAAATALLENTDLGAREIAEKSLNIAGDICVFTNHNHTIEELE 173
>gi|192360997|ref|YP_001980929.1| ATP-dependent protease peptidase subunit [Cellvibrio japonicus
Ueda107]
gi|238065849|sp|B3PI66|HSLV_CELJU RecName: Full=ATP-dependent protease subunit HslV
gi|190687162|gb|ACE84840.1| peptidase, T1 family superfamily [Cellvibrio japonicus Ueda107]
Length = 174
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR+DG VVI GDGQVSLG TVMK NARKVRRL K ++AGFAG +ADAFTL ER
Sbjct: 2 TTILSVRRDGQVVIGGDGQVSLGNTVMKGNARKVRRLYKNQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + QL R++VELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE+ ++
Sbjct: 62 EAKLESHNGQLTRAAVELAKDWRTDRSLRRLEALLAVADKEASLIITGNGDVIQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +TQ A I K + IA DICVYTN N +E L
Sbjct: 122 AIGSGGMYAQAAARALLENTQLDARNIVEKGLKIAGDICVYTNQNHTIEVL 172
>gi|256823469|ref|YP_003147432.1| ATP-dependent protease peptidase subunit [Kangiella koreensis DSM
16069]
gi|256797008|gb|ACV27664.1| 20S proteasome A and B subunits [Kangiella koreensis DSM 16069]
Length = 179
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR++G VVI GDGQVSLG T+MK NARKVRRL +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTILSVRRNGTVVIGGDGQVSLGNTIMKGNARKVRRLYNDQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER EKKLE + +L+R++VELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE
Sbjct: 63 FERFEKKLEAHGGKLMRAAVELAKDWRTDRALRRLEALLAVADKENSLIITGNGDVIQPE 122
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG +A SAA+ALM T SA EI ++IA D+C+YTNHN +E L
Sbjct: 123 DDLIAIGSGGPFAQSAAKALMQKTDLSAREIVETGLTIAGDVCIYTNHNQTIEEL 177
>gi|256828891|ref|YP_003157619.1| 20S proteasome subunits A and B [Desulfomicrobium baculatum DSM
4028]
gi|256578067|gb|ACU89203.1| 20S proteasome A and B subunits [Desulfomicrobium baculatum DSM
4028]
Length = 182
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 139/176 (78%), Gaps = 2/176 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+M TTIL V+ D V +AGDGQV+LGQ + +K ARKVRRL + I+ GFAGS+ADAFT
Sbjct: 3 EMRGTTILAVKDDKGVSVAGDGQVTLGQAIAIKHGARKVRRLYRDRIVCGFAGSTADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KLE++ L+RSSVELAKDWR DKYLR LEAM+L+AD L+++G GDV+EP
Sbjct: 63 LFEKFEAKLEEFGGNLVRSSVELAKDWRSDKYLRRLEAMLLVADAENILMLSGTGDVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++GV AIGSGG+YA+SAARAL T SAE+I RK+M+IAA+ICVYTN +I+ ET+
Sbjct: 123 DDGVAAIGSGGAYAMSAARALRRHTDLSAEDIVRKSMAIAAEICVYTNDHIIFETV 178
>gi|269103959|ref|ZP_06156656.1| ATP-dependent protease HslV [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163857|gb|EEZ42353.1| ATP-dependent protease HslV [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 175
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 139/171 (81%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + LL+++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLLKAAVELAKDWRTDRMLRKLEALLAVADETGSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A +AARAL+ +T A EIA K+++IA DICV+TNH+ +E L
Sbjct: 122 AIGSGGNFAQAAARALLENTDLDAREIAEKSLNIAGDICVFTNHHHTIEEL 172
>gi|331005992|ref|ZP_08329335.1| ATP-dependent protease HslV [gamma proteobacterium IMCC1989]
gi|330420168|gb|EGG94491.1| ATP-dependent protease HslV [gamma proteobacterium IMCC1989]
Length = 179
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 138/177 (77%), Gaps = 1/177 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI++VR++G VVI GDGQVS+G TVMK NARKVRRL +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTIVSVRRNGKVVIGGDGQVSMGNTVMKGNARKVRRLHNDQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+ + QL R++VELAK+WR D+ LR LEA++ +A+ +L+ITG GDV++PE
Sbjct: 63 FERFEAKLQAFNGQLTRAAVELAKEWRSDRALRKLEALLAVANHEASLIITGNGDVIQPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
+ ++AIGSGG YA SAARAL+ +T+ AE I RK+++IA DICVYTNHN +ETL+
Sbjct: 123 DDLIAIGSGGPYAQSAARALLENTELDAEAITRKSLTIAGDICVYTNHNHTIETLEF 179
>gi|149377309|ref|ZP_01895055.1| ATP-dependent protease peptidase subunit [Marinobacter algicola
DG893]
gi|149358406|gb|EDM46882.1| ATP-dependent protease peptidase subunit [Marinobacter algicola
DG893]
Length = 176
Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR+D V + GDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTILSVRRDDEVAMGGDGQVSLGNTVMKGNARKVRRLYNDKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L R++VELAKDWR D+ LR LEA++ +ADKT +L+ITG GDV+EPE G++
Sbjct: 62 EAQLEKHQGNLTRAAVELAKDWRTDRALRRLEALLAVADKTASLIITGNGDVIEPEQGLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AIGSGG +A ++ARAL+ +T A EI K + IAADIC+YTNHN LE L D
Sbjct: 122 AIGSGGPFAQASARALLENTDLKANEIVEKGLDIAADICIYTNHNRTLEVLSAND 176
>gi|89075185|ref|ZP_01161616.1| ATP-dependent protease peptidase subunit [Photobacterium sp. SKA34]
gi|90580883|ref|ZP_01236685.1| ATP-dependent protease peptidase subunit [Vibrio angustum S14]
gi|330447100|ref|ZP_08310750.1| ATP-dependent protease subunit HslV [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|89049007|gb|EAR54574.1| ATP-dependent protease peptidase subunit [Photobacterium sp. SKA34]
gi|90437954|gb|EAS63143.1| ATP-dependent protease peptidase subunit [Vibrio angustum S14]
gi|328491291|dbj|GAA05247.1| ATP-dependent protease subunit HslV [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 175
Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + LL+S+VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEALLAVADETGSLIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A +AA AL+ +T A EIA KA++IA DICV+TNHN +E L+
Sbjct: 122 AIGSGGNFAQAAATALLENTDLGAREIAEKALNIAGDICVFTNHNHTIEELE 173
>gi|90417287|ref|ZP_01225213.1| Peptidase component of the HslUV protease (Heat shock protein)
[marine gamma proteobacterium HTCC2207]
gi|90330872|gb|EAS46135.1| Peptidase component of the HslUV protease (Heat shock protein)
[marine gamma proteobacterium HTCC2207]
Length = 181
Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR++G VVI GDGQVSLG TVMK NARKVRRL +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTILSVRRNGKVVIGGDGQVSLGNTVMKGNARKVRRLYNDKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLEQ+ L R++VELAKDWR D+ LR LEA++ +AD +L+ITG GDV++PE
Sbjct: 63 FERFEAKLEQHQGNLTRAAVELAKDWRSDRILRKLEALLAVADSEASLIITGNGDVIQPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG +A SAARAL+ +T+ SA +I + + IA DIC+YTNHN LE L
Sbjct: 123 DDLIAIGSGGPFAQSAARALLDNTEMSARDIVEQGLKIAGDICIYTNHNRTLEEL 177
>gi|254498811|ref|ZP_05111522.1| ATP-dependent protease peptidase subunit [Legionella drancourtii
LLAP12]
gi|254351975|gb|EET10799.1| ATP-dependent protease peptidase subunit [Legionella drancourtii
LLAP12]
Length = 182
Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR+ VVI GDGQV+LG TVMK NARKVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QFRGTTILSVRRGNQVVIGGDGQVTLGNTVMKGNARKVRRLYKEQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE + L+R++VELAKDWR D+ LR LEA++ +AD +L+ITG GDV+EPE
Sbjct: 63 FERFESKLEMHQGHLVRAAVELAKDWRTDRILRRLEAVLAVADSKSSLIITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++AIGSGG +A +AARALM +T SA EI RKA++IA DIC+YTN+N+ +E L
Sbjct: 123 ESLIAIGSGGPFAQAAARALMQNTDLSAVEIVRKALTIAGDICIYTNNNLTIEEL 177
>gi|126666727|ref|ZP_01737704.1| ATP-dependent protease peptidase subunit [Marinobacter sp. ELB17]
gi|126628772|gb|EAZ99392.1| ATP-dependent protease peptidase subunit [Marinobacter sp. ELB17]
Length = 176
Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR+D V + GDGQVS G TVMK NARKVRRL G ++AGFAG +ADAFTL ER
Sbjct: 2 TTILSVRRDDEVTMGGDGQVSFGNTVMKGNARKVRRLYNGQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L R++VELAKDWR D+ LR LEA++ +ADKT +L+ITG GDV+EPE G++
Sbjct: 62 EAQLEKHQGNLTRAAVELAKDWRSDRALRKLEALLAVADKTASLIITGNGDVIEPEMGLI 121
Query: 136 AIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AIGSGG +A ++ARAL+ N SA EI K + IAADIC+YTN N +E L D
Sbjct: 122 AIGSGGPFAQASARALLENTNMSAREITEKGLIIAADICIYTNQNRTIEVLSAND 176
>gi|291533223|emb|CBL06336.1| ATP dependent peptidase CodWX, CodW component. Threonine peptidase.
MEROPS family T01B [Megamonas hypermegale ART12/1]
Length = 180
Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 135/175 (77%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
ATTI+ V+KDG IAGDGQV+ GQ +MKANARKVRRL G ++AGFAGS ADAFTL
Sbjct: 4 FKATTIIAVKKDGKTAIAGDGQVTFGQAAIMKANARKVRRLYNGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL +Y L R++VELAKDWR D+ LR LEA++L+AD+ L+++G G+V+EP+
Sbjct: 64 FEKFESKLIEYHGNLTRAAVELAKDWRTDRVLRKLEALLLVADENTMLLLSGNGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG YALSA RAL N +A EIA++A++IAADICVYTNHNI++E L
Sbjct: 124 GNVAAIGSGGFYALSAGRALAKHSNLTAAEIAKEALTIAADICVYTNHNIIVEEL 178
>gi|145632761|ref|ZP_01788495.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
3655]
gi|145634508|ref|ZP_01790217.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittAA]
gi|319897988|ref|YP_004136185.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
F3031]
gi|144986956|gb|EDJ93508.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
3655]
gi|145268053|gb|EDK08048.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittAA]
gi|317433494|emb|CBY81877.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
F3031]
Length = 175
Score = 217 bits (553), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++P E+ +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAREIVEKSLKIAGDICVFTNTNFTIEEL 173
>gi|290985682|ref|XP_002675554.1| predicted protein [Naegleria gruberi]
gi|284089151|gb|EFC42810.1| predicted protein [Naegleria gruberi]
Length = 414
Score = 217 bits (553), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 137/183 (74%), Gaps = 7/183 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MH TT+L VRK G V I DGQV+LG VMK NARK+R++G ++IAGFAGS+ADA TL
Sbjct: 79 MHGTTVLCVRKAGKVCIQADGQVTLGHVVMKGNARKLRQIG-SDVIAGFAGSTADAITLF 137
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE+YP QL+R+ VE+AK WR DKYLR LEA++++ADK ITL++TG GDVLEP
Sbjct: 138 ERLEAKLEEYPGQLMRACVEMAKLWRTDKYLRKLEAVMIVADKNITLILTGNGDVLEPNE 197
Query: 133 G-----VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
G V+ IGSGG YA+SAA+AL+ AE+IA+KAM IA +IC+YTN N TL+
Sbjct: 198 GGANDSVVGIGSGGHYAISAAKALLDVNGFDAEQIAQKAMLIAGEICIYTNTNFTRLTLE 257
Query: 187 VGD 189
D
Sbjct: 258 EKD 260
>gi|115379319|ref|ZP_01466428.1| ATP-dependent protease HslV [Stigmatella aurantiaca DW4/3-1]
gi|115363664|gb|EAU62790.1| ATP-dependent protease HslV [Stigmatella aurantiaca DW4/3-1]
Length = 166
Score = 217 bits (553), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 134/166 (80%), Gaps = 1/166 (0%)
Query: 21 VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
+R++G VVIAGDGQVSL +T+MK A+KVRR+G+GN++AGFAGS+ADAFTL ER E KL+
Sbjct: 1 MRREGKVVIAGDGQVSLDKTIMKNTAKKVRRIGEGNVLAGFAGSTADAFTLFERFEAKLK 60
Query: 81 QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSG 140
++ L R+ VEL KDWR D++LR LEA++++AD+ T +++G GDV+EP++G+ A+GSG
Sbjct: 61 EHQKNLARACVELGKDWRTDRFLRRLEALLIVADREKTFILSGAGDVIEPDHGIAAVGSG 120
Query: 141 GSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G YALSAARAL + T SA EIA AM+IAADICVYTN ++ E L
Sbjct: 121 GHYALSAARALQAHTSLSAREIATHAMAIAADICVYTNSHVTFEEL 166
>gi|291280523|ref|YP_003497358.1| ATP-dependent protease HslVU, peptidase subunit HslV [Deferribacter
desulfuricans SSM1]
gi|290755225|dbj|BAI81602.1| ATP-dependent protease HslVU, peptidase subunit HslV [Deferribacter
desulfuricans SSM1]
Length = 175
Score = 217 bits (553), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL V+KDG + + GDGQV+ G TV+K NA+KVR++ ++I GFAGS+ADAFTL+
Sbjct: 2 FKGTTILAVKKDGKIAVGGDGQVTFGHTVLKHNAKKVRKIYNDSVICGFAGSTADAFTLM 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER EKKL +Y QLLR++VELAKDWR DKYLR LEAM+++ADK ++TG GDV+EP N
Sbjct: 62 ERFEKKLNEYSGQLLRAAVELAKDWRTDKYLRRLEAMMIVADKNNIYILTGNGDVVEPNN 121
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG YA +AA AL+ N +A+EI K++ IAA IC+YTN N+++E
Sbjct: 122 NVAAIGSGGPYAQAAATALVENSNLTAKEIVEKSLKIAASICIYTNDNLIVEEF 175
>gi|145630325|ref|ZP_01786106.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
R3021]
gi|148827691|ref|YP_001292444.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittGG]
gi|229844344|ref|ZP_04464484.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
6P18H1]
gi|166222979|sp|A5UH05|HSLV_HAEIG RecName: Full=ATP-dependent protease subunit HslV
gi|144984060|gb|EDJ91497.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
R3021]
gi|148718933|gb|ABR00061.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittGG]
gi|229812593|gb|EEP48282.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
6P18H1]
Length = 175
Score = 217 bits (552), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++P E+ +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAREIVEKSLRIAGDICVFTNTNFTIEEL 173
>gi|11513574|pdb|1G3I|G Chain G, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513575|pdb|1G3I|H Chain H, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513576|pdb|1G3I|I Chain I, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513577|pdb|1G3I|J Chain J, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513578|pdb|1G3I|K Chain K, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513579|pdb|1G3I|L Chain L, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513580|pdb|1G3I|M Chain M, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513581|pdb|1G3I|N Chain N, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513582|pdb|1G3I|O Chain O, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513583|pdb|1G3I|P Chain P, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513584|pdb|1G3I|Q Chain Q, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513585|pdb|1G3I|R Chain R, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513593|pdb|1G3K|A Chain A, Crystal Structure Of The H. Influenzae Protease Hslv At
1.9 A Resolution
gi|11513594|pdb|1G3K|B Chain B, Crystal Structure Of The H. Influenzae Protease Hslv At
1.9 A Resolution
gi|11513595|pdb|1G3K|C Chain C, Crystal Structure Of The H. Influenzae Protease Hslv At
1.9 A Resolution
gi|17943074|pdb|1JJW|A Chain A, Structure Of Haemophilus Influenzae Hslv Protein At 1.9 A
Resolution
gi|17943075|pdb|1JJW|B Chain B, Structure Of Haemophilus Influenzae Hslv Protein At 1.9 A
Resolution
gi|17943076|pdb|1JJW|C Chain C, Structure Of Haemophilus Influenzae Hslv Protein At 1.9 A
Resolution
gi|21465938|pdb|1KYI|G Chain G, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465939|pdb|1KYI|H Chain H, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465940|pdb|1KYI|I Chain I, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465941|pdb|1KYI|J Chain J, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465942|pdb|1KYI|K Chain K, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465943|pdb|1KYI|L Chain L, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465944|pdb|1KYI|M Chain M, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465945|pdb|1KYI|N Chain N, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465946|pdb|1KYI|O Chain O, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465947|pdb|1KYI|P Chain P, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465948|pdb|1KYI|Q Chain Q, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465949|pdb|1KYI|R Chain R, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|33357695|pdb|1OFH|G Chain G, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357696|pdb|1OFH|H Chain H, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357697|pdb|1OFH|I Chain I, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357698|pdb|1OFH|L Chain L, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357699|pdb|1OFH|M Chain M, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357700|pdb|1OFH|N Chain N, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357708|pdb|1OFI|G Chain G, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357709|pdb|1OFI|H Chain H, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357710|pdb|1OFI|I Chain I, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357711|pdb|1OFI|L Chain L, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357712|pdb|1OFI|M Chain M, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357713|pdb|1OFI|N Chain N, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
Length = 174
Score = 217 bits (552), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 1 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 60
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++P E+ +
Sbjct: 61 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 120
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA DICV+TN N +E L
Sbjct: 121 LAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL 172
>gi|16272440|ref|NP_438654.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae Rd
KW20]
gi|145628876|ref|ZP_01784676.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
22.1-21]
gi|145638589|ref|ZP_01794198.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittII]
gi|260580441|ref|ZP_05848269.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
RdAW]
gi|260582239|ref|ZP_05850032.1| heat shock protein [Haemophilus influenzae NT127]
gi|1170387|sp|P43772|HSLV_HAEIN RecName: Full=ATP-dependent protease subunit HslV
gi|1573473|gb|AAC22153.1| heat shock protein (hslV) [Haemophilus influenzae Rd KW20]
gi|144979346|gb|EDJ89032.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
22.1-21]
gi|145272184|gb|EDK12092.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittII]
gi|260092783|gb|EEW76718.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
RdAW]
gi|260094607|gb|EEW78502.1| heat shock protein [Haemophilus influenzae NT127]
gi|301169213|emb|CBW28810.1| peptidase component of the HslUV protease [Haemophilus influenzae
10810]
gi|309750091|gb|ADO80075.1| Protease HslVU, peptidase subunit [Haemophilus influenzae R2866]
Length = 175
Score = 217 bits (552), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++P E+ +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL 173
>gi|68249095|ref|YP_248207.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
86-028NP]
gi|81336499|sp|Q4QN50|HSLV_HAEI8 RecName: Full=ATP-dependent protease subunit HslV
gi|68057294|gb|AAX87547.1| ATP-dependent protease HslV [Haemophilus influenzae 86-028NP]
Length = 175
Score = 217 bits (552), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++P E+ +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA D+CV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAREIVEKSLKIAGDVCVFTNTNFTIEEL 173
>gi|159469063|ref|XP_001692687.1| peptidase subunit of mitochondrial ATP-dependent protease hslUV
[Chlamydomonas reinhardtii]
gi|158277940|gb|EDP03706.1| peptidase subunit of mitochondrial ATP-dependent protease hslUV
[Chlamydomonas reinhardtii]
Length = 248
Score = 217 bits (552), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 139/177 (78%), Gaps = 2/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H+TTIL VRKD +VV+ GDGQVS+G +K N RKVRR+G+G ++AGFAGS+AD +L
Sbjct: 51 ETHSTTILCVRKDDMVVMIGDGQVSVGSVSVKPNVRKVRRIGEG-VVAGFAGSAADGLSL 109
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE++P QLLR++VELAK WR DK LR L+A +L+AD + TL I+G GDVLEP
Sbjct: 110 LERLEMKLEEHPGQLLRAAVELAKQWRQDKALRFLQAELLVADASTTLTISGNGDVLEPH 169
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
+GVMAIGSGG++AL+AARALM + A I K+M IAAD+C+YTN N +E++ +
Sbjct: 170 DGVMAIGSGGNFALAAARALMDVPEMDAMTIGTKSMKIAADMCIYTNDNFTIESINL 226
>gi|319775581|ref|YP_004138069.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
F3047]
gi|317450172|emb|CBY86386.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
F3047]
Length = 175
Score = 217 bits (552), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++P E+ +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL +T+ SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALAENTELSAREIVEKSLKIAGDICVFTNTNFTIEEL 173
>gi|152981232|ref|YP_001354903.1| ATP-dependent protease peptidase subunit [Janthinobacterium sp.
Marseille]
gi|166222981|sp|A6T306|HSLV_JANMA RecName: Full=ATP-dependent protease subunit HslV
gi|151281309|gb|ABR89719.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Janthinobacterium sp. Marseille]
Length = 178
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ +V + GDGQV+LG VMK ARKVR++ G ++ GFAG +ADAFTL
Sbjct: 3 QFHGTTILSVRRGNIVALGGDGQVTLGNIVMKGTARKVRKVYNGKVLVGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LER E KLE++ L+R+SVELAKDWR D+ LR LEAM+L+ADK TL+ITG GDVLEP
Sbjct: 63 LERFESKLEKHQGHLMRASVELAKDWRTDRMLRRLEAMLLVADKETTLIITGNGDVLEPN 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA+AL +T S E+I +K+++IA ++C+YTN + ++ETL
Sbjct: 123 DGIGAIGSGGTYAQSAAKALQENTDLSPEDIVKKSLTIAGELCIYTNLSHIIETL 177
>gi|260913428|ref|ZP_05919907.1| ATP-dependent protease HslV [Pasteurella dagmatis ATCC 43325]
gi|260632502|gb|EEX50674.1| ATP-dependent protease HslV [Pasteurella dagmatis ATCC 43325]
Length = 176
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-NGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE + +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEADQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++ALSAARAL+ +T SA EI K++ IA DICVYTN N +E L
Sbjct: 122 LAIGSGGNFALSAARALVENTDLSAREIVEKSLKIAGDICVYTNTNFTIEEL 173
>gi|145636238|ref|ZP_01791907.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittHH]
gi|148825227|ref|YP_001289980.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittEE]
gi|229846581|ref|ZP_04466689.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
7P49H1]
gi|166222978|sp|A5U9Z6|HSLV_HAEIE RecName: Full=ATP-dependent protease subunit HslV
gi|145270403|gb|EDK10337.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittHH]
gi|148715387|gb|ABQ97597.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittEE]
gi|229810674|gb|EEP46392.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
7P49H1]
gi|309972351|gb|ADO95552.1| Protease HslVU, peptidase subunit [Haemophilus influenzae R2846]
Length = 175
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRKGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++P E+ +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL 173
>gi|53803704|ref|YP_114446.1| ATP-dependent protease peptidase subunit [Methylococcus capsulatus
str. Bath]
gi|85542206|sp|Q606K2|HSLV_METCA RecName: Full=ATP-dependent protease subunit HslV
gi|53757465|gb|AAU91756.1| ATP-dependent protease HslV [Methylococcus capsulatus str. Bath]
Length = 187
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 137/178 (76%), Gaps = 1/178 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
H TTI++VR+ VVI GDGQV+LG TVMK NARKVRRL G ++AGFAG++ADAFTL
Sbjct: 3 NFHGTTIVSVRRGDQVVIGGDGQVTLGDTVMKGNARKVRRLYNGRVLAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E +LE++ L +++VEL KDWR D+ LR LEA++ IAD +L+I+G GDV+EPE
Sbjct: 63 FERFESQLEKHRGNLTKAAVELVKDWRTDRMLRRLEALLAIADDKASLIISGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
NG++AIGSGG +A SAARAL+ +T+ A +I K++ IAADIC+YTN N+ +E L+ G
Sbjct: 123 NGLIAIGSGGPFAQSAARALLENTELGARDIVEKSLIIAADICIYTNRNLTIEELETG 180
>gi|71083040|ref|YP_265759.1| ATP-dependent protease peptidase subunit [Candidatus Pelagibacter
ubique HTCC1062]
gi|71062153|gb|AAZ21156.1| ATP-dependent protease [Candidatus Pelagibacter ubique HTCC1062]
Length = 171
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 136/170 (80%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ +RK+ VV+AGDGQVS+G TV+K+ A KVR++ K N+IAGFAGS+ADA TL ERL
Sbjct: 2 TTIVLIRKNNEVVVAGDGQVSMGNTVIKSTAAKVRKIEKRNVIAGFAGSTADALTLFERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE++ L R++VELAKDWR DKYLR LEA++ I DK + +I+G GDVLEPE +
Sbjct: 62 EAKLEKHAGNLPRAAVELAKDWRTDKYLRRLEALMAIGDKENSFIISGTGDVLEPEGDAI 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
IGSGG+YAL+AA+ L+ T SAEE+ARKA+ +A++ICV+TN+NI +E +
Sbjct: 122 GIGSGGNYALAAAKVLLDTDLSAEEVARKAIQVASEICVFTNNNIKIEKI 171
>gi|221488320|gb|EEE26534.1| heat shock protein HSLV, putative [Toxoplasma gondii GT1]
Length = 338
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ HATTIL VRK V +AGDG VS GQ ++K NARKVRRL G ++ GFAG++AD
Sbjct: 130 FVPPRHATTILCVRKGDQVCVAGDGMVSQGQMIVKPNARKVRRLQDG-VVCGFAGATADC 188
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTLLE+LE KLE+YP QLLRS VELAK WR D+YLR+LEA++++ADK ++L ++G+GDVL
Sbjct: 189 FTLLEKLEAKLEEYPGQLLRSCVELAKQWRTDRYLRHLEAVLIVADKKMSLEVSGVGDVL 248
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
E +G++ +GSGG YA++AARAL SA EI +++M+IAA +C +TN ++ E L+
Sbjct: 249 ESHDGILGVGSGGPYAVAAARALYDIDGLSAHEICKRSMAIAASMCCHTNDRVIFEVLE 307
>gi|183221726|ref|YP_001839722.1| ATP-dependent protease peptidase subunit [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189911801|ref|YP_001963356.1| ATP-dependent protease peptidase subunit [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|259491391|sp|B0SCD1|HSLV_LEPBA RecName: Full=ATP-dependent protease subunit HslV
gi|259491392|sp|B0SKV3|HSLV_LEPBP RecName: Full=ATP-dependent protease subunit HslV
gi|167776477|gb|ABZ94778.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167780148|gb|ABZ98446.1| Heat shock protein, HslVU, proteasome-related peptidase subunit
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 177
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 139/174 (79%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+HATTIL+VRK+G + + GDGQVS+G TVMK A+KVRRL G +IAGFAGS+ADAFTL
Sbjct: 4 IHATTILSVRKNGKIAVGGDGQVSMGNTVMKHTAKKVRRLYNGKVIAGFAGSAADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E EKKL ++ + R++VELA++WRMD+ LR LEA++++ D + +I+G GDV+ P++
Sbjct: 64 ELFEKKLIEHGGSVSRAAVELAREWRMDRMLRRLEALLIVCDANESFLISGTGDVISPDD 123
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV+AIGSGG++ALSAARAL+ +T +EI KAM+I ADIC+YTNHN+V+E L
Sbjct: 124 GVLAIGSGGNFALSAARALVENTDLDPKEIITKAMNITADICIYTNHNLVIEEL 177
>gi|237833117|ref|XP_002365856.1| heat shock protein HSLV, putative [Toxoplasma gondii ME49]
gi|211963520|gb|EEA98715.1| heat shock protein HSLV, putative [Toxoplasma gondii ME49]
Length = 338
Score = 216 bits (549), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ HATTIL VRK V +AGDG VS GQ ++K NARKVRRL G ++ GFAG++AD
Sbjct: 130 FVPPRHATTILCVRKGDQVCVAGDGMVSQGQMIVKPNARKVRRLQDG-VVCGFAGATADC 188
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTLLE+LE KLE+YP QLLRS VELAK WR D+YLR+LEA++++ADK ++L ++G+GDVL
Sbjct: 189 FTLLEKLEAKLEEYPGQLLRSCVELAKQWRTDRYLRHLEAVLIVADKKMSLEVSGVGDVL 248
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
E +G++ +GSGG YA++AARAL SA EI +++M+IAA +C +TN ++ E L+
Sbjct: 249 ESHDGILGVGSGGPYAVAAARALYDIDGLSAHEICKRSMAIAASMCCHTNDRVIFEVLE 307
>gi|221508826|gb|EEE34395.1| heat shock protein HSLV, putative [Toxoplasma gondii VEG]
Length = 338
Score = 216 bits (549), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ HATTIL VRK V +AGDG VS GQ ++K NARKVRRL G ++ GFAG++AD
Sbjct: 130 FVPPRHATTILCVRKGDQVCVAGDGMVSQGQMIVKPNARKVRRLQDG-VVCGFAGATADC 188
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTLLE+LE KLE+YP QLLRS VELAK WR D+YLR+LEA++++ADK ++L ++G+GDVL
Sbjct: 189 FTLLEKLEAKLEEYPGQLLRSCVELAKQWRTDRYLRHLEAVLIVADKKMSLEVSGVGDVL 248
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
E +G++ +GSGG YA++AARAL SA EI +++M+IAA +C +TN ++ E L+
Sbjct: 249 ESHDGILGVGSGGPYAVAAARALYDIDGLSAHEICKRSMAIAASMCCHTNDRVIFEVLE 307
>gi|315633392|ref|ZP_07888683.1| ATP-dependent protease HslV [Aggregatibacter segnis ATCC 33393]
gi|315477892|gb|EFU68633.1| ATP-dependent protease HslV [Aggregatibacter segnis ATCC 33393]
Length = 175
Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGKVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++P E+ +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA +ICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAREIVEKSLKIAGEICVFTNTNFTIEEL 173
>gi|258597527|ref|XP_001350699.2| Heat shock protein hslv [Plasmodium falciparum 3D7]
gi|254945393|gb|AAN36379.2| Heat shock protein hslv [Plasmodium falciparum 3D7]
Length = 207
Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 136/176 (77%), Gaps = 2/176 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H TTIL VRK+ V + GDG VS G ++K NA+K+RRL K NI+ GFAG++AD FT
Sbjct: 33 IPRHGTTILCVRKNNEVCLIGDGMVSQGTMIVKGNAKKIRRL-KDNILMGFAGATADCFT 91
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LL++ E K+++YPNQLLRS VELAK WR D+YLR+LEA++++ADK I L +TG GDVLEP
Sbjct: 92 LLDKFETKIDEYPNQLLRSCVELAKLWRTDRYLRHLEAVLIVADKDILLEVTGNGDVLEP 151
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ GSGG YA++AARAL +N SA++IA KAM+IAAD+C +TN+N + ETL
Sbjct: 152 SGNVLGTGSGGPYAMAAARALYDVENLSAKDIAYKAMNIAADMCCHTNNNFICETL 207
>gi|251793770|ref|YP_003008500.1| ATP-dependent protease peptidase subunit [Aggregatibacter
aphrophilus NJ8700]
gi|247535167|gb|ACS98413.1| ATP-dependent protease HslV [Aggregatibacter aphrophilus NJ8700]
Length = 174
Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGKVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++P E+ +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA +ICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAREIVEKSLKIAGEICVFTNTNFTIEEL 173
>gi|88858830|ref|ZP_01133471.1| peptidase component of the HslUV protease [Pseudoalteromonas
tunicata D2]
gi|88819056|gb|EAR28870.1| peptidase component of the HslUV protease [Pseudoalteromonas
tunicata D2]
Length = 172
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 136/171 (79%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+DG VVIAGDGQVSLG TVMK NA+KVRRL G ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRDGKVVIAGDGQVSLGNTVMKGNAKKVRRLYNGKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L +++VE+AKDWR D+ LR LEA++ +AD T + +ITG GDV++PEN ++
Sbjct: 62 ESKLEMHQGHLTKAAVEMAKDWRSDRALRKLEALLAVADHTASFIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T+ SA EIA K+++IA +ICV+TNH +E L
Sbjct: 122 AIGSGGAFAQSAATALLENTELSAREIAEKSLTIAGNICVFTNHFQTIEEL 172
>gi|15603614|ref|NP_246688.1| ATP-dependent protease peptidase subunit [Pasteurella multocida
subsp. multocida str. Pm70]
gi|13431570|sp|P57969|HSLV_PASMU RecName: Full=ATP-dependent protease subunit HslV
gi|12722165|gb|AAK03833.1| HslV [Pasteurella multocida subsp. multocida str. Pm70]
Length = 176
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-NGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE + +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEADQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++ALSAARAL+ +T+ SA EI K++ IA DICVYTN + +E L
Sbjct: 122 LAIGSGGNFALSAARALVENTELSAREIVEKSLKIAGDICVYTNTHFTIEEL 173
>gi|290968893|ref|ZP_06560430.1| ATP-dependent protease HslVU, peptidase subunit [Megasphaera
genomosp. type_1 str. 28L]
gi|290781189|gb|EFD93780.1| ATP-dependent protease HslVU, peptidase subunit [Megasphaera
genomosp. type_1 str. 28L]
Length = 187
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 142/183 (77%), Gaps = 2/183 (1%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGS 64
+++ A HATTI+ V+++G IAGDGQV+LG V MKA ARKVRRL G II+GFAGS
Sbjct: 2 NEYMATDFHATTIVAVQRNGQTAIAGDGQVTLGNAVIMKATARKVRRLYNGKIISGFAGS 61
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
ADAF L +R E KL ++ L+RS+VELAKDWR DK L LEA++L+AD L+I+G
Sbjct: 62 VADAFALFDRFEGKLNEHNGNLVRSAVELAKDWRSDKILHKLEALLLVADAERILLISGN 121
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLE 183
G+V+EP++G+ AIGSGG+YAL+A RAL+ +T SA++IA KA+ IAADICVYTNHN+++E
Sbjct: 122 GEVIEPDDGLTAIGSGGNYALAAGRALLQNTDLSAQDIALKALHIAADICVYTNHNVIVE 181
Query: 184 TLK 186
+K
Sbjct: 182 EIK 184
>gi|88608110|ref|YP_506071.1| ATP-dependent protease peptidase subunit [Neorickettsia sennetsu
str. Miyayama]
gi|123492312|sp|Q2GEM5|HSLV_NEOSM RecName: Full=ATP-dependent protease subunit HslV
gi|88600279|gb|ABD45747.1| heat shock protein HslVU, HslV subunit [Neorickettsia sennetsu str.
Miyayama]
Length = 188
Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 136/176 (77%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTL 71
H TTIL++RKD VV+ GDGQV++G V+ K+ A+KV+RL G II+GFAGS+ADAFTL
Sbjct: 5 FHGTTILSIRKDDKVVMIGDGQVTMGNAVVVKSTAQKVKRLSNGKIISGFAGSTADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERLE KLE +P QLLR+ VELAKDWR DK+LR LEAM+++AD TL++ G GDV+EPE
Sbjct: 65 FERLESKLEAHPGQLLRACVELAKDWRTDKFLRRLEAMMIVADARGTLILNGAGDVIEPE 124
Query: 132 NGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG+YAL+AA+AL+ ++ A +IA AM IAA ICV+TN N +E +
Sbjct: 125 DSVAAIGSGGNYALAAAKALIVHASDLDAFQIAEAAMKIAAKICVFTNENFTVEVI 180
>gi|91762535|ref|ZP_01264500.1| ATP-dependent protease [Candidatus Pelagibacter ubique HTCC1002]
gi|91718337|gb|EAS84987.1| ATP-dependent protease [Candidatus Pelagibacter ubique HTCC1002]
Length = 171
Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 136/170 (80%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ +RK+ VV+AGDGQVS+G TV+K+ A KVR++ K N+IAGFAGS+ADA TL ERL
Sbjct: 2 TTIVLIRKNNEVVVAGDGQVSMGNTVIKSTAAKVRKIEKRNVIAGFAGSTADALTLFERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE++ L R++VELAKDWR DKYLR LEA++ I DK + +I+G GDVLEPE +
Sbjct: 62 EAKLEKHAGNLPRAAVELAKDWRTDKYLRRLEALMAIGDKENSFIISGTGDVLEPEGDAI 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
IGSGG+YAL+AA+ L+ T SAEE+A+KA+ +A++ICV+TN+NI +E +
Sbjct: 122 GIGSGGNYALAAAKVLLDTDLSAEEVAKKAIQVASEICVFTNNNIKIEKI 171
>gi|325577181|ref|ZP_08147665.1| ATP-dependent protease HslV [Haemophilus parainfluenzae ATCC 33392]
gi|301155382|emb|CBW14848.1| peptidase component of the HslUV protease [Haemophilus
parainfluenzae T3T1]
gi|325160763|gb|EGC72884.1| ATP-dependent protease HslV [Haemophilus parainfluenzae ATCC 33392]
Length = 176
Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-NGV 134
E+KLE + LL+++VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE + +
Sbjct: 62 ERKLEMHQGHLLKAAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEADQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTDLSAREIVEKSLKIAGDICVFTNTNFTIEEL 173
>gi|289207302|ref|YP_003459368.1| 20S proteasome A and subunit betas [Thioalkalivibrio sp. K90mix]
gi|288942933|gb|ADC70632.1| 20S proteasome A and B subunits [Thioalkalivibrio sp. K90mix]
Length = 180
Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI+ VRKDG V + GDGQVSLG TVMK NARKVRR+ I+AGFAG +ADAFTL
Sbjct: 3 QFRGTTIVCVRKDGAVTLGGDGQVSLGNTVMKGNARKVRRVYHDRILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E LE++ + R++VELAKDWR D+ LR LEA++ ++D+ + VI+G GDV+EPE
Sbjct: 63 FERFEGMLEKHSGNITRAAVELAKDWRTDRALRRLEALLAVSDRDNSFVISGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
N ++AIGSGG YA ++A+AL+ +T SA ++ K+++IAADICVYTNHNI LE+L
Sbjct: 123 NALIAIGSGGPYAQASAQALLQNTDLSARDVVEKSLNIAADICVYTNHNITLESL 177
>gi|255659257|ref|ZP_05404666.1| ATP-dependent protease HslVU, peptidase subunit [Mitsuokella
multacida DSM 20544]
gi|260848712|gb|EEX68719.1| ATP-dependent protease HslVU, peptidase subunit [Mitsuokella
multacida DSM 20544]
Length = 182
Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 137/177 (77%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
++ HATTI VRK+G IAGDGQV+ GQ T+MK+ ARKVRR+ G ++AGFAGS ADAF
Sbjct: 5 LQFHATTICAVRKNGKTAIAGDGQVTFGQNTIMKSTARKVRRIYHGRVLAGFAGSVADAF 64
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE Y L R++VELAK+WR DK + LEA++L+ADK L+++G G+V+E
Sbjct: 65 TLFEKFEAKLETYNGNLQRAAVELAKEWRTDKMMGKLEALLLVADKDTLLMLSGNGEVIE 124
Query: 130 PENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P+ V AIGSGG +ALSAARAL+ T A+EIA++A+SIAADICVYTNHNI +E L
Sbjct: 125 PDGDVAAIGSGGFFALSAARALVKHTDMEAKEIAKEALSIAADICVYTNHNIRVEEL 181
>gi|221133924|ref|ZP_03560229.1| ATP-dependent protease peptidase subunit [Glaciecola sp. HTCC2999]
Length = 174
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VV+AGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGNQVVMAGDGQVSLGNTVMKGNAKKVRRLYHDKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L R++VELAKDWR D+ LR LEA++ +AD T +LVITG GDV++PE ++
Sbjct: 62 ESKLEMHQGHLTRAAVELAKDWRTDRMLRKLEALLAVADHTASLVITGNGDVIQPEKDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG +A SAA AL+ +TQ SA++IA K+++IA DICVYTNH+ +ETL
Sbjct: 122 AIGSGGPFAQSAATALLDNTQLSAQDIATKSLTIAGDICVYTNHSQTVETL 172
>gi|261866863|ref|YP_003254785.1| ATP-dependent protease peptidase subunit [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412195|gb|ACX81566.1| ATP-dependent protease peptidase subunit [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 175
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGKVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-NGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE + +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPETDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T SA EI K++ IA +ICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTDLSAREIVEKSLKIAGEICVFTNTNFTIEEL 173
>gi|260886591|ref|ZP_05897854.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
sputigena ATCC 35185]
gi|330839575|ref|YP_004414155.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
sputigena ATCC 35185]
gi|260863734|gb|EEX78234.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
sputigena ATCC 35185]
gi|329747339|gb|AEC00696.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
sputigena ATCC 35185]
Length = 180
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 137/175 (78%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ VR+ G IAGDGQV+ GQ+ +MK+ ARKVRRL G ++AGFAGS ADAFTL
Sbjct: 5 FHATTIVAVRQKGKTAIAGDGQVTFGQSAIMKSTARKVRRLYHGKVVAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE++ L+R+SVELAK+WR D+ LR LEA++L+AD L+I+G G+V+EP+
Sbjct: 65 FEKFEAKLEEFNGNLMRASVELAKEWRTDRVLRKLEALLLVADAETLLMISGGGEVIEPD 124
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG YAL+AARAL+ T+ A EIA++A+++AADICV+TNHNI +E L
Sbjct: 125 GDVAAIGSGGFYALAAARALVKHTEMEAAEIAKEALTLAADICVFTNHNIKVEEL 179
>gi|329122376|ref|ZP_08250963.1| ATP-dependent protease HslV [Haemophilus aegyptius ATCC 11116]
gi|327473658|gb|EGF19077.1| ATP-dependent protease HslV [Haemophilus aegyptius ATCC 11116]
Length = 175
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 137/172 (79%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++V ++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVHRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++P E+ +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL +T+ SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALAENTELSAREIVEKSLKIAGDICVFTNTNFTIEEL 173
>gi|258514511|ref|YP_003190733.1| ATP-dependent protease peptidase subunit [Desulfotomaculum
acetoxidans DSM 771]
gi|257778216|gb|ACV62110.1| 20S proteasome A and B subunits [Desulfotomaculum acetoxidans DSM
771]
Length = 176
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 138/175 (78%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+KDG IAGDGQV+ G +TV+K ARK+RRL I+AGFAGS ADAFTL
Sbjct: 2 FHATTIVAVQKDGKTAIAGDGQVTFGDRTVIKHKARKIRRLYNHKILAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAK+WRMDK LR LEA++++ADK LV++G G+V+EP+
Sbjct: 62 FEKFEAKLEEYNGNLQRAAVELAKEWRMDKILRRLEALLIVADKETMLVLSGGGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+GV+A+GSGG YAL+AAR L TQ +EI R+A+++AADICVYTN+NI++E +
Sbjct: 122 DGVIAVGSGGPYALAAARVLAKHTQLEPKEIVREALAVAADICVYTNNNIIVEEI 176
>gi|104783981|ref|YP_610479.1| ATP-dependent protease peptidase subunit [Pseudomonas entomophila
L48]
gi|122401538|sp|Q1I3U0|HSLV_PSEE4 RecName: Full=ATP-dependent protease subunit HslV
gi|95112968|emb|CAK17696.1| peptidase component of the HslUV protease [Pseudomonas entomophila
L48]
Length = 176
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 101/169 (59%), Positives = 137/169 (81%), Gaps = 1/169 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYNGQVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +L+++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EAQLQKHSGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLE 183
A+GSGG YA +AARAL++ T SA EI A++IA DICV+TNHN+ +E
Sbjct: 122 AMGSGGGYAQAAARALLNKTDLSAREITEAALNIAGDICVFTNHNLTIE 170
>gi|82703660|ref|YP_413226.1| ATP-dependent protease peptidase subunit [Nitrosospira multiformis
ATCC 25196]
gi|82411725|gb|ABB75834.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Nitrosospira multiformis ATCC 25196]
Length = 196
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+ R+ V + GDGQV+LG V KA+ARKVRRL I+AGFAG +ADAFTL
Sbjct: 21 EYHGTTILSARRGNHVALGGDGQVTLGAVVAKASARKVRRLYHDRILAGFAGGTADAFTL 80
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+RS+VELAKDWR D+ LR LEAM+++AD TL+ITG GDV+EPE
Sbjct: 81 FERFEGKLEKHQGHLMRSAVELAKDWRTDRILRRLEAMLVVADPAATLIITGAGDVIEPE 140
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA SAARAL+ +T + EI +KA++IA D+C+YTN N V+E L+
Sbjct: 141 FGLAAIGSGGSYAHSAARALLENTDLTPPEIVKKALTIAGDLCIYTNQNHVIEVLE 196
>gi|121997993|ref|YP_001002780.1| ATP-dependent protease peptidase subunit [Halorhodospira halophila
SL1]
gi|189028450|sp|A1WWB6|HSLV_HALHL RecName: Full=ATP-dependent protease subunit HslV
gi|121589398|gb|ABM61978.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Halorhodospira halophila SL1]
Length = 184
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 136/175 (77%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TTIL VR++G V + GDGQV+LG TV+K NARKVRRL G ++AGFAG++ADAFTL
Sbjct: 4 LHGTTILAVRREGQVALGGDGQVTLGHTVLKGNARKVRRLYHGRVLAGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E +LE++ QL RS+VELAK+WR D+ LR LEA++++A+ L ++G GDV+EPE+
Sbjct: 64 ERFEAQLEKHHGQLARSAVELAKEWRSDRVLRRLEALLVVANTESLLTLSGTGDVIEPEH 123
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+MA+GSGG YA +A RAL+ ST A++I ++A+ IA DICVYTN +I +ETL
Sbjct: 124 DLMAVGSGGPYAQAAGRALLESTDLPADQITQRALEIAGDICVYTNRHITVETLP 178
>gi|146305570|ref|YP_001186035.1| ATP-dependent protease peptidase subunit [Pseudomonas mendocina
ymp]
gi|330501485|ref|YP_004378354.1| ATP-dependent protease peptidase subunit [Pseudomonas mendocina
NK-01]
gi|166222990|sp|A4XPN7|HSLV_PSEMY RecName: Full=ATP-dependent protease subunit HslV
gi|145573771|gb|ABP83303.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Pseudomonas mendocina ymp]
gi|328915771|gb|AEB56602.1| ATP-dependent protease peptidase subunit [Pseudomonas mendocina
NK-01]
Length = 176
Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 137/171 (80%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE G++
Sbjct: 62 EGQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEEGLI 121
Query: 136 AIGSGGSYALSAARA-LMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
A+GSGG++A +AARA LM T SA E+A+ A+ IA DICV+TNH+ +E L
Sbjct: 122 AMGSGGNFAQAAARALLMKTDLSALEVAQTALGIAGDICVFTNHHQTIEEL 172
>gi|293391044|ref|ZP_06635378.1| ATP-dependent protease peptidase subunit [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951578|gb|EFE01697.1| ATP-dependent protease peptidase subunit [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 175
Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGKVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++P E+ +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T SA EI K++ IA +ICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTDLSAREIVEKSLKIAGEICVFTNTNFTIEEL 173
>gi|255039358|ref|YP_003089979.1| ATP-dependent protease peptidase subunit [Dyadobacter fermentans
DSM 18053]
gi|254952114|gb|ACT96814.1| 20S proteasome A and B subunits [Dyadobacter fermentans DSM 18053]
Length = 180
Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 136/174 (78%), Gaps = 2/174 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+HATT+L V +G V + DGQ ++G TV K+N +K+R L G I+ GFAGS+ADAFTL
Sbjct: 3 KIHATTVLGVLHNGTVALGADGQATMGNTVAKSNVKKIRTLQGGKILVGFAGSTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E+KL Y + R+++ELAKDWR D+YLR LEAM++ A+K LVI+G GDVLEPE
Sbjct: 63 LDRFEEKLNGYGGNMKRAAIELAKDWRTDRYLRKLEAMMITANKDEILVISGTGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
NG+ +IGSGG++ALSAA+AL +T SAEE+ R+ ++IAAD+C+YTNHN+V+E
Sbjct: 123 NGIASIGSGGNFALSAAQALKKHATHLSAEEMVREGLTIAADLCIYTNHNLVIE 176
>gi|42526719|ref|NP_971817.1| ATP-dependent protease peptidase subunit [Treponema denticola ATCC
35405]
gi|47605597|sp|P61478|HSLV_TREDE RecName: Full=ATP-dependent protease subunit HslV
gi|41817034|gb|AAS11728.1| heat shock protein HslVU, ATP-dependent protease HslV [Treponema
denticola ATCC 35405]
gi|325473781|gb|EGC76969.1| ATP-dependent protease hslV [Treponema denticola F0402]
Length = 178
Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 138/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TT++ VRKDG +V+AGDGQV++G+TVMK NARKVR++ G II GFAG++ADAFTL
Sbjct: 4 KIRSTTVIAVRKDGKIVMAGDGQVTMGETVMKGNARKVRKIYDGKIITGFAGATADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LE+ E +++++ L R++VELAKDWR DK L+NL+A++L+AD TL+I+G GDV+EPE
Sbjct: 64 LEKFEIRVKEFSGDLTRAAVELAKDWRTDKMLKNLQALLLVADSKTTLLISGNGDVIEPE 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
V+AIGSGG+YA ++A ALM N SA EIA K++ IA IC+YTN I+ E +
Sbjct: 124 EDVLAIGSGGNYAYASALALMQNTNLSAREIAEKSLQIAGKICIYTNGKIITEEI 178
>gi|221061613|ref|XP_002262376.1| Heat shock protein hslv [Plasmodium knowlesi strain H]
gi|193811526|emb|CAQ42254.1| Heat shock protein hslv, putative [Plasmodium knowlesi strain H]
Length = 208
Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 135/173 (78%), Gaps = 2/173 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL VRK+ V + GDG VS G ++K NA+K+RRL K NI+ GFAG++AD FTLL+
Sbjct: 37 HGTTILCVRKNNEVCLIGDGMVSQGTMIVKGNAKKIRRL-KDNILMGFAGATADCFTLLD 95
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
+ E K+++YPNQLLRS VELAK WR D+YLR+LEA++++ADK + L +TG GDVLEP
Sbjct: 96 KFETKIDEYPNQLLRSCVELAKLWRTDRYLRHLEAVLIVADKDVLLEVTGNGDVLEPSGN 155
Query: 134 VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ GSGG YA++AARAL +N SA++IA KAM+IAAD+C +TN+N + ETL
Sbjct: 156 VLGTGSGGPYAIAAARALYDVENLSAKDIAYKAMNIAADMCCHTNNNFICETL 208
>gi|319778978|ref|YP_004129891.1| ATP-dependent protease HslV [Taylorella equigenitalis MCE9]
gi|317109002|gb|ADU91748.1| ATP-dependent protease HslV [Taylorella equigenitalis MCE9]
Length = 188
Score = 214 bits (545), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 136/177 (76%), Gaps = 1/177 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTIL VRK V I GDGQV+LG V+K +ARK+R+L +++GFAG++ADAFTL
Sbjct: 3 QFHATTILCVRKGDEVAIGGDGQVTLGNVVIKGSARKIRKLYHDKVLSGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ LLR++VEL KDWR D+ LR LEAM+++ADK TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGHLLRAAVELTKDWRTDRVLRRLEAMLIVADKDHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
GV AIGSGGSYA SAA+AL+ +T + EEI +K++ IA D+C+YTN N V++ L +
Sbjct: 123 LGVAAIGSGGSYAQSAAQALLQNTDLTPEEIVKKSLEIAGDLCIYTNQNHVIQKLDI 179
>gi|83648620|ref|YP_437055.1| ATP-dependent protease peptidase subunit [Hahella chejuensis KCTC
2396]
gi|123530767|sp|Q2S9P4|HSLV_HAHCH RecName: Full=ATP-dependent protease subunit HslV
gi|83636663|gb|ABC32630.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Hahella
chejuensis KCTC 2396]
Length = 181
Score = 214 bits (545), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+DG V + GDGQVSLG TVMK NARKVRRL +IAGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRDGKVAMGGDGQVSLGNTVMKGNARKVRRLYHNKVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ LR LEA++ +AD +L+ITG GDV+EPEN ++
Sbjct: 62 EAQLEKHQGNLVRAAVELAKDWRTDRALRRLEALLAVADNKASLIITGNGDVIEPENSLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A +I +K++ IA DICV+TN N+ LE +
Sbjct: 122 AIGSGGPYAQAAARALLENTELEASDIVKKSLVIAGDICVFTNQNLTLEEI 172
>gi|183597346|ref|ZP_02958839.1| hypothetical protein PROSTU_00601 [Providencia stuartii ATCC 25827]
gi|188023371|gb|EDU61411.1| hypothetical protein PROSTU_00601 [Providencia stuartii ATCC 25827]
Length = 176
Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADEHTSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ SA EIA KA+SIA DIC+YTNHN+ E +
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALSIAGDICIYTNHNVNFEEI 172
>gi|156103401|ref|XP_001617393.1| heat shock protein hslv [Plasmodium vivax SaI-1]
gi|148806267|gb|EDL47666.1| heat shock protein hslv, putative [Plasmodium vivax]
Length = 207
Score = 214 bits (544), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 135/173 (78%), Gaps = 2/173 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL VRK+ V + GDG VS G ++K NA+K+RRL K NI+ GFAG++AD FTLL+
Sbjct: 36 HGTTILCVRKNNEVCLIGDGMVSQGTMIVKGNAKKIRRL-KDNILMGFAGATADCFTLLD 94
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
+ E K+++YPNQLLRS VELAK WR D+YLR+LEA++++ADK + L +TG GDVLEP
Sbjct: 95 KFETKIDEYPNQLLRSCVELAKLWRTDRYLRHLEAVLIVADKDVLLEVTGNGDVLEPSGN 154
Query: 134 VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ GSGG YA++AARAL +N SA++IA KAM+IAAD+C +TN+N + ETL
Sbjct: 155 VLGTGSGGPYAIAAARALYDVENLSAKDIAYKAMNIAADMCCHTNNNFICETL 207
>gi|114319230|ref|YP_740913.1| ATP-dependent protease peptidase subunit [Alkalilimnicola ehrlichii
MLHE-1]
gi|122312756|sp|Q0ACL4|HSLV_ALHEH RecName: Full=ATP-dependent protease subunit HslV
gi|114225624|gb|ABI55423.1| HslV component of HslUV peptidase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 183
Score = 214 bits (544), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL R+DG VVI GDGQV+LG TVMK NARKVRRL G ++AGFAG +ADAFTL
Sbjct: 3 QFRGTTILAARRDGQVVIGGDGQVTLGHTVMKGNARKVRRLHNGRVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E +LE+Y L R++VE+AKDWR D+ LR LEA++++AD+ LVI+G GDV++PE
Sbjct: 63 FERFEGQLEKYRGNLTRAAVEMAKDWRSDRVLRRLEALLIVADREAMLVISGNGDVIDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG YA +AA ALM +Q SA E+ +A+ IA DIC+YTN N+ +E L
Sbjct: 123 DDLVAIGSGGPYAQAAATALMRHSQLSARELVEQALGIAGDICIYTNRNLSIEEL 177
>gi|270159287|ref|ZP_06187943.1| ATP-dependent protease HslV [Legionella longbeachae D-4968]
gi|289165889|ref|YP_003456027.1| Peptidase component of the HslUV protease (Heat shock protein)
[Legionella longbeachae NSW150]
gi|269987626|gb|EEZ93881.1| ATP-dependent protease HslV [Legionella longbeachae D-4968]
gi|288859062|emb|CBJ12991.1| Peptidase component of the HslUV protease (Heat shock protein)
[Legionella longbeachae NSW150]
Length = 182
Score = 214 bits (544), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR+ VVI GDGQV+LG TVMK NARKVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QFRGTTILSVRRGNQVVIGGDGQVTLGNTVMKGNARKVRRLYKDQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE + L+R++VELAKDWR D+ LR LEA++ +AD +L+ITG GDV+EPE
Sbjct: 63 FERFESKLEMHQGHLVRAAVELAKDWRTDRMLRRLEAVLAVADVRSSLIITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG +A +AARAL+ +T SA EI RKA+ IA DIC+YTN+++ LE L
Sbjct: 123 HSLIAIGSGGPFAQAAARALLENTDLSAMEIVRKALMIAGDICIYTNNHLTLEEL 177
>gi|226326795|ref|ZP_03802313.1| hypothetical protein PROPEN_00655 [Proteus penneri ATCC 35198]
gi|225204632|gb|EEG86986.1| hypothetical protein PROPEN_00655 [Proteus penneri ATCC 35198]
Length = 176
Score = 213 bits (543), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRKGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADENTSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARA++ +T+ SA EIA KA+SIA DIC+YTNHN+ E L
Sbjct: 122 AIGSGGPYAQAAARAMLENTELSAREIAEKALSIAGDICIYTNHNVNFEEL 172
>gi|290477228|ref|YP_003470145.1| peptidase component of the HslUV protease [Xenorhabdus bovienii
SS-2004]
gi|289176578|emb|CBJ83387.1| peptidase component of the HslUV protease [Xenorhabdus bovienii
SS-2004]
Length = 176
Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGHTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGGSYA +AARA++ +T+ SA EIA +A++IA DIC+YTNHN E L
Sbjct: 122 AIGSGGSYAQAAARAMLETTELSAREIAERALTIAGDICIYTNHNHNFEEL 172
>gi|304311983|ref|YP_003811581.1| Peptidase component of the HslUV protease (heat shock protein)
[gamma proteobacterium HdN1]
gi|301797716|emb|CBL45938.1| Peptidase component of the HslUV protease (heat shock protein)
[gamma proteobacterium HdN1]
Length = 179
Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 136/177 (76%), Gaps = 1/177 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+ R++G VVI GDGQV+LG TVMK NARKVRRL +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTILSARRNGKVVIGGDGQVTLGNTVMKGNARKVRRLYHDKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+RS+VELAKDWR D+ LR LEA++ +AD +L+ITG GDV++PE
Sbjct: 63 FERFEAKLEKHQGHLVRSAVELAKDWRTDRMLRRLEALLAVADADASLIITGNGDVIQPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
N ++AIGSGG +ALSAARAL +T+ SA EI K++ IAADIC+YTNHN +E L
Sbjct: 123 NDLIAIGSGGPFALSAARALYENTELSAREIIEKSLGIAADICIYTNHNFTIEELSC 179
>gi|296136674|ref|YP_003643916.1| 20S proteasome A and B subunits [Thiomonas intermedia K12]
gi|294340808|emb|CAZ89203.1| ATP-dependent protease hslV (Heat shock protein hslV) [Thiomonas
sp. 3As]
gi|295796796|gb|ADG31586.1| 20S proteasome A and B subunits [Thiomonas intermedia K12]
Length = 179
Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG V+K+ ARKVRRL I+AGFAG +ADAFTL
Sbjct: 3 QYHGTTILSVRRGATVALGGDGQVTLGNIVVKSTARKVRRLYNNQILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ QLLRS+VELAKDWR D+ LR LEAM+ +AD +L+ITG GDVLEPE
Sbjct: 63 FERFEAKLEKHQGQLLRSAVELAKDWRTDRMLRRLEAMLSVADAEHSLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG+YA SAARAL+ T S EI +++ IA DIC+YTN + +ETL
Sbjct: 123 YGIVAIGSGGAYAQSAARALLEHTALSPREIVAQSLKIAGDICIYTNQSHTIETL 177
>gi|268593397|ref|ZP_06127618.1| ATP-dependent protease HslVU, peptidase subunit [Providencia
rettgeri DSM 1131]
gi|291311094|gb|EFE51547.1| ATP-dependent protease HslVU, peptidase subunit [Providencia
rettgeri DSM 1131]
Length = 176
Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADEHTSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T SA+EIA KA++IA DIC+YTNHN+ E +
Sbjct: 122 AIGSGGPYAQSAARALLENTDLSAKEIAEKALAIAGDICIYTNHNVNFEEI 172
>gi|220931600|ref|YP_002508508.1| heat shock protein HslVU, ATP dependent protease HslV
[Halothermothrix orenii H 168]
gi|219992910|gb|ACL69513.1| heat shock protein HslVU, ATP dependent protease HslV
[Halothermothrix orenii H 168]
Length = 181
Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 139/175 (79%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+HATT++ V+ G +AGDGQV++G T+MK ARKVRRL KGNI+AGFAG+SADAFTL
Sbjct: 7 IHATTVVAVKYKGKTAMAGDGQVTMGNTIMKGGARKVRRLYKGNILAGFAGTSADAFTLF 66
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E KLE+Y L R++VELAK+WR DK LR LEA++L+A++ L+I+G GDV+EP++
Sbjct: 67 EKFEVKLEEYHGNLERAAVELAKEWRTDKVLRKLEALLLVANEEKILLISGNGDVIEPDD 126
Query: 133 GVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG YAL+AARAL+ + A++IAR+A+ IA++IC+YTN NIV+E L
Sbjct: 127 DVTAIGSGGPYALAAARALVKHNSGLEAQDIAREALKIASEICIYTNGNIVVEEL 181
>gi|134096122|ref|YP_001101197.1| ATP-dependent protease peptidase subunit [Herminiimonas
arsenicoxydans]
gi|166222980|sp|A4G989|HSLV_HERAR RecName: Full=ATP-dependent protease subunit HslV
gi|133740025|emb|CAL63076.1| ATP-dependent protease HslV [Herminiimonas arsenicoxydans]
Length = 178
Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ VV + GDGQV+LG VMK ARKVR++ G ++ GFAG +ADAFTL
Sbjct: 3 QFHGTTILSVRRGNVVALGGDGQVTLGNIVMKGTARKVRKVYSGKVLVGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LER E KLE++ L+R+SVELAKDWR D+ LR LEAM+L+AD TLVITG GDVLEP
Sbjct: 63 LERFESKLEKHQGHLMRASVELAKDWRTDRMLRRLEAMLLVADHETTLVITGNGDVLEPN 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA+AL +T+ S EI +K+++IA ++C+YTN + +ETL
Sbjct: 123 DGIGAIGSGGTYAQSAAKALQENTELSPLEIVKKSLTIAGELCIYTNLSHTIETL 177
>gi|91213474|ref|YP_543460.1| ATP-dependent protease peptidase subunit [Escherichia coli UTI89]
gi|117626198|ref|YP_859521.1| ATP-dependent protease peptidase subunit [Escherichia coli APEC O1]
gi|218560999|ref|YP_002393912.1| ATP-dependent protease peptidase subunit [Escherichia coli S88]
gi|218692216|ref|YP_002400428.1| ATP-dependent protease peptidase subunit [Escherichia coli ED1a]
gi|237702965|ref|ZP_04533446.1| ATP-dependent protease peptidase subunit [Escherichia sp.
3_2_53FAA]
gi|122421650|sp|Q1R3Y5|HSLV_ECOUT RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|166221638|sp|A1AIA7|HSLV_ECOK1 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|226704539|sp|B7MI64|HSLV_ECO45 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|254802414|sp|B7MR21|HSLV_ECO81 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|91075048|gb|ABE09929.1| ATP-dependent hslVU protease peptidase subunit hslV [Escherichia
coli UTI89]
gi|115515322|gb|ABJ03397.1| ATP-dependent hslVU protease peptidase subunit hslV [Escherichia
coli APEC O1]
gi|218367768|emb|CAR05562.1| peptidase component of the HslUV protease [Escherichia coli S88]
gi|218429780|emb|CAR10604.1| peptidase component of the HslUV protease [Escherichia coli ED1a]
gi|226902902|gb|EEH89161.1| ATP-dependent protease peptidase subunit [Escherichia sp.
3_2_53FAA]
gi|294492730|gb|ADE91486.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
IHE3034]
gi|307629007|gb|ADN73311.1| ATP-dependent protease peptidase subunit [Escherichia coli UM146]
gi|323949422|gb|EGB45311.1| proteasome A-type and B-type [Escherichia coli H252]
gi|323954297|gb|EGB50082.1| proteasome A-type and B-type [Escherichia coli H263]
Length = 176
Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLIKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 172
>gi|11513631|pdb|1E94|A Chain A, Hslv-Hslu From E.Coli
gi|11513632|pdb|1E94|B Chain B, Hslv-Hslu From E.Coli
gi|11513633|pdb|1E94|C Chain C, Hslv-Hslu From E.Coli
gi|11513634|pdb|1E94|D Chain D, Hslv-Hslu From E.Coli
gi|13399753|pdb|1G4A|B Chain B, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|13399754|pdb|1G4A|A Chain A, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|13399755|pdb|1G4A|D Chain D, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|13399756|pdb|1G4A|C Chain C, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|13399761|pdb|1G4B|M Chain M, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|13399762|pdb|1G4B|N Chain N, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|13399763|pdb|1G4B|O Chain O, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|13399764|pdb|1G4B|P Chain P, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|17942583|pdb|1HT2|A Chain A, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942584|pdb|1HT2|B Chain B, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942587|pdb|1HT2|C Chain C, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942588|pdb|1HT2|D Chain D, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942589|pdb|1HT2|I Chain I, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942590|pdb|1HT2|J Chain J, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942593|pdb|1HT2|K Chain K, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942594|pdb|1HT2|L Chain L, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942595|pdb|1HT1|C Chain C, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942596|pdb|1HT1|D Chain D, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942597|pdb|1HT1|V Chain V, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942598|pdb|1HT1|X Chain X, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942599|pdb|1HT1|A Chain A, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942600|pdb|1HT1|B Chain B, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942601|pdb|1HT1|Z Chain Z, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942602|pdb|1HT1|Y Chain Y, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942607|pdb|1HQY|A Chain A, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942608|pdb|1HQY|B Chain B, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942609|pdb|1HQY|C Chain C, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942610|pdb|1HQY|D Chain D, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
Length = 175
Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 1 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 60
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 61 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 120
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 171
>gi|217969219|ref|YP_002354453.1| ATP-dependent protease peptidase subunit [Thauera sp. MZ1T]
gi|217506546|gb|ACK53557.1| 20S proteasome A and B subunits [Thauera sp. MZ1T]
Length = 178
Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR+ V + GDGQV+LG V+KA+ARKVR L G I+AGFAG +ADAFTL
Sbjct: 3 QYRGTTILSVRRGNRVALGGDGQVTLGNIVIKASARKVRTLYNGQILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+++ LLRS+VELAKDWR D+ LR LEAM+ +AD+ +LVITG GDVLEPE
Sbjct: 63 FERFEAKLDKHQGNLLRSAVELAKDWRTDRMLRRLEAMLAVADREHSLVITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG+YA SAARAL+ +T+ EI KA+SIA D+C+YTNH+ +E L
Sbjct: 123 QGIVAIGSGGAYAQSAARALLENTELEPREIVSKALSIAGDLCIYTNHHHTIEVL 177
>gi|3114398|pdb|1NED|A Chain A, Crystal Structure Of Hslv (Clpq) At 3.8 Angstroms
Resolution
gi|3114399|pdb|1NED|B Chain B, Crystal Structure Of Hslv (Clpq) At 3.8 Angstroms
Resolution
gi|3114400|pdb|1NED|C Chain C, Crystal Structure Of Hslv (Clpq) At 3.8 Angstroms
Resolution
Length = 183
Score = 213 bits (543), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 1 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 60
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 61 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 120
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 171
>gi|34495856|ref|NP_900071.1| ATP-dependent protease peptidase subunit [Chromobacterium violaceum
ATCC 12472]
gi|47605642|sp|Q7P113|HSLV_CHRVO RecName: Full=ATP-dependent protease subunit HslV
gi|34101711|gb|AAQ58079.1| heat shock protein [Chromobacterium violaceum ATCC 12472]
Length = 183
Score = 213 bits (543), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 136/180 (75%), Gaps = 1/180 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI++VR+ V + GDGQV+LG V+KA ARK+R+L G ++AGFAG +ADAFTL
Sbjct: 3 QFDGTTIVSVRRGERVALGGDGQVTLGNIVIKATARKIRKLHGGKVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ER E KL+++ LL S+VELAKDWR D+ LR LEAM+++ADK TL+ITG GDVLEPE
Sbjct: 63 IERFEAKLQKHQGNLLVSAVELAKDWRTDRMLRRLEAMLIVADKDHTLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADICVYTNHNIVLETLKVGDE 190
G+ AIGSGG++A SAARAL + A E + +K++ IA DIC+YTNHN ++ETL DE
Sbjct: 123 QGIAAIGSGGAFAQSAARALFENTDLAPEVVVKKSLEIAGDICIYTNHNHLIETLGPDDE 182
>gi|15804523|ref|NP_290563.1| ATP-dependent protease peptidase subunit [Escherichia coli O157:H7
EDL933]
gi|15834113|ref|NP_312886.1| ATP-dependent protease peptidase subunit [Escherichia coli O157:H7
str. Sakai]
gi|16131770|ref|NP_418367.1| peptidase component of the HslUV protease [Escherichia coli str.
K-12 substr. MG1655]
gi|24115226|ref|NP_709736.1| ATP-dependent protease peptidase subunit [Shigella flexneri 2a str.
301]
gi|26250699|ref|NP_756739.1| ATP-dependent protease peptidase subunit [Escherichia coli CFT073]
gi|30064775|ref|NP_838946.1| ATP-dependent protease peptidase subunit [Shigella flexneri 2a str.
2457T]
gi|74314432|ref|YP_312851.1| ATP-dependent protease peptidase subunit [Shigella sonnei Ss046]
gi|82546281|ref|YP_410228.1| ATP-dependent protease peptidase subunit [Shigella boydii Sb227]
gi|82778892|ref|YP_405241.1| ATP-dependent protease peptidase subunit [Shigella dysenteriae
Sd197]
gi|89110097|ref|AP_003877.1| peptidase component of the HslUV protease [Escherichia coli str.
K-12 substr. W3110]
gi|110644268|ref|YP_671998.1| ATP-dependent protease peptidase subunit [Escherichia coli 536]
gi|110807793|ref|YP_691313.1| ATP-dependent protease peptidase subunit [Shigella flexneri 5 str.
8401]
gi|157159294|ref|YP_001465426.1| ATP-dependent protease peptidase subunit [Escherichia coli E24377A]
gi|157163407|ref|YP_001460725.1| ATP-dependent protease peptidase subunit [Escherichia coli HS]
gi|168748768|ref|ZP_02773790.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4113]
gi|168755618|ref|ZP_02780625.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4401]
gi|168761682|ref|ZP_02786689.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4501]
gi|168768236|ref|ZP_02793243.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4486]
gi|168775230|ref|ZP_02800237.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4196]
gi|168780851|ref|ZP_02805858.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4076]
gi|168786790|ref|ZP_02811797.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC869]
gi|168799485|ref|ZP_02824492.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC508]
gi|170022057|ref|YP_001727011.1| ATP-dependent protease peptidase subunit [Escherichia coli ATCC
8739]
gi|170083402|ref|YP_001732722.1| peptidase component of the HslUV protease [Escherichia coli str.
K-12 substr. DH10B]
gi|170680847|ref|YP_001746319.1| ATP-dependent protease peptidase subunit [Escherichia coli SMS-3-5]
gi|170769655|ref|ZP_02904108.1| ATP-dependent protease HslV [Escherichia albertii TW07627]
gi|187733880|ref|YP_001882627.1| ATP-dependent protease peptidase subunit [Shigella boydii CDC
3083-94]
gi|188494807|ref|ZP_03002077.1| ATP-dependent protease HslV [Escherichia coli 53638]
gi|191166450|ref|ZP_03028281.1| ATP-dependent protease HslV [Escherichia coli B7A]
gi|191172702|ref|ZP_03034240.1| ATP-dependent protease HslV [Escherichia coli F11]
gi|193063996|ref|ZP_03045082.1| ATP-dependent protease HslV [Escherichia coli E22]
gi|193067977|ref|ZP_03048942.1| ATP-dependent protease HslV [Escherichia coli E110019]
gi|194427454|ref|ZP_03060003.1| ATP-dependent protease HslV [Escherichia coli B171]
gi|194433271|ref|ZP_03065552.1| ATP-dependent protease HslV [Shigella dysenteriae 1012]
gi|194438354|ref|ZP_03070445.1| ATP-dependent protease HslV [Escherichia coli 101-1]
gi|195937576|ref|ZP_03082958.1| ATP-dependent protease peptidase subunit [Escherichia coli O157:H7
str. EC4024]
gi|208809711|ref|ZP_03252048.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4206]
gi|208813249|ref|ZP_03254578.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4045]
gi|208819868|ref|ZP_03260188.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4042]
gi|209399609|ref|YP_002273452.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4115]
gi|209921412|ref|YP_002295496.1| ATP-dependent protease peptidase subunit [Escherichia coli SE11]
gi|215489263|ref|YP_002331694.1| ATP-dependent protease peptidase subunit [Escherichia coli O127:H6
str. E2348/69]
gi|217326046|ref|ZP_03442130.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. TW14588]
gi|218551084|ref|YP_002384875.1| ATP-dependent protease peptidase subunit [Escherichia fergusonii
ATCC 35469]
gi|218556494|ref|YP_002389408.1| ATP-dependent protease peptidase subunit [Escherichia coli IAI1]
gi|218697646|ref|YP_002405313.1| ATP-dependent protease peptidase subunit [Escherichia coli 55989]
gi|218701363|ref|YP_002408992.1| ATP-dependent protease peptidase subunit [Escherichia coli IAI39]
gi|218707558|ref|YP_002415077.1| ATP-dependent protease peptidase subunit [Escherichia coli UMN026]
gi|238902998|ref|YP_002928794.1| peptidase component of the HslUV protease [Escherichia coli BW2952]
gi|253775429|ref|YP_003038260.1| ATP-dependent protease peptidase subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254039193|ref|ZP_04873243.1| ATP-dependent protease hslV [Escherichia sp. 1_1_43]
gi|254163882|ref|YP_003046990.1| ATP-dependent protease peptidase subunit [Escherichia coli B str.
REL606]
gi|254795934|ref|YP_003080771.1| ATP-dependent protease peptidase subunit [Escherichia coli O157:H7
str. TW14359]
gi|256021577|ref|ZP_05435442.1| ATP-dependent protease peptidase subunit [Shigella sp. D9]
gi|256026030|ref|ZP_05439895.1| ATP-dependent protease peptidase subunit [Escherichia sp. 4_1_40B]
gi|260846648|ref|YP_003224426.1| peptidase component HslV of the HslUV protease [Escherichia coli
O103:H2 str. 12009]
gi|260857667|ref|YP_003231558.1| peptidase component HslV of the HslUV protease [Escherichia coli
O26:H11 str. 11368]
gi|260870651|ref|YP_003237053.1| peptidase component HslV of the HslUV protease [Escherichia coli
O111:H- str. 11128]
gi|261223566|ref|ZP_05937847.1| peptidase component of the HslUV protease [Escherichia coli O157:H7
str. FRIK2000]
gi|261257328|ref|ZP_05949861.1| peptidase component HslV of the HslUV protease [Escherichia coli
O157:H7 str. FRIK966]
gi|291285347|ref|YP_003502165.1| ATP-dependent protease hslV [Escherichia coli O55:H7 str. CB9615]
gi|293407552|ref|ZP_06651471.1| ATP-dependent protease peptidase subunit [Escherichia coli
FVEC1412]
gi|293413372|ref|ZP_06656033.1| conserved hypothetical protein [Escherichia coli B354]
gi|293417437|ref|ZP_06660061.1| ATP-dependent protease hslV [Escherichia coli B185]
gi|293470245|ref|ZP_06664656.1| ATP-dependent protease hslV [Escherichia coli B088]
gi|298383300|ref|ZP_06992893.1| ATP-dependent protease hslV [Escherichia coli FVEC1302]
gi|301024061|ref|ZP_07187776.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 196-1]
gi|306813804|ref|ZP_07447980.1| ATP-dependent protease peptidase subunit [Escherichia coli NC101]
gi|307140630|ref|ZP_07499986.1| ATP-dependent protease peptidase subunit [Escherichia coli H736]
gi|307315161|ref|ZP_07594742.1| 20S proteasome A and B subunits [Escherichia coli W]
gi|331644670|ref|ZP_08345789.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli H736]
gi|331649786|ref|ZP_08350866.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli M605]
gi|331655630|ref|ZP_08356622.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli M718]
gi|331660487|ref|ZP_08361421.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA206]
gi|331665587|ref|ZP_08366485.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA143]
gi|331670785|ref|ZP_08371621.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA271]
gi|331675427|ref|ZP_08376177.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA280]
gi|331680049|ref|ZP_08380711.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli H591]
gi|331685672|ref|ZP_08386255.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli H299]
gi|332282818|ref|ZP_08395231.1| ATP-dependent protease peptidase subunit [Shigella sp. D9]
gi|67465546|sp|P0A7B8|HSLV_ECOLI RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|67465547|sp|P0A7B9|HSLV_ECOL6 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|67465548|sp|P0A7C0|HSLV_ECO57 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|67465551|sp|P0A7C1|HSLV_SHIFL RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|123048626|sp|Q0TAD2|HSLV_ECOL5 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|123146475|sp|Q0SY57|HSLV_SHIF8 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|123558117|sp|Q31U58|HSLV_SHIBS RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|123561282|sp|Q32AA5|HSLV_SHIDS RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|123615640|sp|Q3YV46|HSLV_SHISS RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|166918420|sp|A7ZUE7|HSLV_ECO24 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|166918421|sp|A8A738|HSLV_ECOHS RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|189028448|sp|B1IVE7|HSLV_ECOLC RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|226704540|sp|B7NU73|HSLV_ECO7I RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|226704541|sp|B7M6Y3|HSLV_ECO8A RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|226704542|sp|B7NFN1|HSLV_ECOLU RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|226704543|sp|B1LNN7|HSLV_ECOSM RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|226704544|sp|B7LUS2|HSLV_ESCF3 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|229486311|sp|B1XB98|HSLV_ECODH RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065857|sp|B5YZ72|HSLV_ECO5E RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065874|sp|B6I4S5|HSLV_ECOSE RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238691704|sp|B2TWC8|HSLV_SHIB3 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|254802412|sp|B7UNQ2|HSLV_ECO27 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|254802413|sp|B7LA29|HSLV_ECO55 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|259491387|sp|C5A099|HSLV_ECOBW RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|12518838|gb|AAG59127.1|AE005624_3 heat shock protein hslVU, proteasome-related peptidase subunit
[Escherichia coli O157:H7 str. EDL933]
gi|26111130|gb|AAN83313.1|AE016770_113 ATP-dependent protease hslV [Escherichia coli CFT073]
gi|305035|gb|AAB03064.1| similar to S. cerevisiae potential proteasome component
[Escherichia coli str. K-12 substr. MG1655]
gi|1790367|gb|AAC76914.1| peptidase component of the HslUV protease [Escherichia coli str.
K-12 substr. MG1655]
gi|13364335|dbj|BAB38282.1| heat shock protein HslV [Escherichia coli O157:H7 str. Sakai]
gi|24054511|gb|AAN45443.1| heat shock protein HslVU, proteasome-related peptidase subunit
[Shigella flexneri 2a str. 301]
gi|30043035|gb|AAP18757.1| heat shock protein HslVU, proteasome-related peptidase subunit
[Shigella flexneri 2a str. 2457T]
gi|73857909|gb|AAZ90616.1| heat shock protein hslVU, proteasome-related peptidase subunit
[Shigella sonnei Ss046]
gi|81243040|gb|ABB63750.1| heat shock protein hslVU, proteasome-related peptidase subunit
[Shigella dysenteriae Sd197]
gi|81247692|gb|ABB68400.1| heat shock protein hslVU, proteasome-related peptidase subunit
[Shigella boydii Sb227]
gi|85676128|dbj|BAE77378.1| peptidase component of the HslUV protease [Escherichia coli str.
K12 substr. W3110]
gi|110345860|gb|ABG72097.1| ATP-dependent protease HslV [Escherichia coli 536]
gi|110617341|gb|ABF06008.1| ATP-dependent protease peptidase subunit [Shigella flexneri 5 str.
8401]
gi|157069087|gb|ABV08342.1| ATP-dependent protease HslV [Escherichia coli HS]
gi|157081324|gb|ABV21032.1| ATP-dependent protease HslV [Escherichia coli E24377A]
gi|169756985|gb|ACA79684.1| 20S proteasome A and B subunits [Escherichia coli ATCC 8739]
gi|169891237|gb|ACB04944.1| peptidase component of the HslUV protease [Escherichia coli str.
K-12 substr. DH10B]
gi|170121463|gb|EDS90394.1| ATP-dependent protease HslV [Escherichia albertii TW07627]
gi|170518565|gb|ACB16743.1| ATP-dependent protease HslV [Escherichia coli SMS-3-5]
gi|187430872|gb|ACD10146.1| ATP-dependent protease HslV [Shigella boydii CDC 3083-94]
gi|187769205|gb|EDU33049.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4196]
gi|188016747|gb|EDU54869.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4113]
gi|188490006|gb|EDU65109.1| ATP-dependent protease HslV [Escherichia coli 53638]
gi|189001578|gb|EDU70564.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4076]
gi|189357142|gb|EDU75561.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4401]
gi|189362680|gb|EDU81099.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4486]
gi|189367910|gb|EDU86326.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4501]
gi|189373271|gb|EDU91687.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC869]
gi|189378008|gb|EDU96424.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC508]
gi|190903550|gb|EDV63268.1| ATP-dependent protease HslV [Escherichia coli B7A]
gi|190907006|gb|EDV66607.1| ATP-dependent protease HslV [Escherichia coli F11]
gi|192929461|gb|EDV83069.1| ATP-dependent protease HslV [Escherichia coli E22]
gi|192958597|gb|EDV89035.1| ATP-dependent protease HslV [Escherichia coli E110019]
gi|194414494|gb|EDX30767.1| ATP-dependent protease HslV [Escherichia coli B171]
gi|194418555|gb|EDX34643.1| ATP-dependent protease HslV [Shigella dysenteriae 1012]
gi|194422791|gb|EDX38787.1| ATP-dependent protease HslV [Escherichia coli 101-1]
gi|208729512|gb|EDZ79113.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4206]
gi|208734526|gb|EDZ83213.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4045]
gi|208739991|gb|EDZ87673.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4042]
gi|209161009|gb|ACI38442.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4115]
gi|209752238|gb|ACI74426.1| essential cell division protein [Escherichia coli]
gi|209752240|gb|ACI74427.1| essential cell division protein [Escherichia coli]
gi|209752242|gb|ACI74428.1| essential cell division protein [Escherichia coli]
gi|209752244|gb|ACI74429.1| essential cell division protein [Escherichia coli]
gi|209752246|gb|ACI74430.1| essential cell division protein [Escherichia coli]
gi|209914671|dbj|BAG79745.1| ATP-dependent protease peptidase subunit [Escherichia coli SE11]
gi|215267335|emb|CAS11784.1| peptidase component of the HslUV protease [Escherichia coli O127:H6
str. E2348/69]
gi|217322267|gb|EEC30691.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. TW14588]
gi|218354378|emb|CAV01137.1| peptidase component of the HslUV protease [Escherichia coli 55989]
gi|218358625|emb|CAQ91275.1| peptidase component of the HslUV protease [Escherichia fergusonii
ATCC 35469]
gi|218363263|emb|CAR00908.1| peptidase component of the HslUV protease [Escherichia coli IAI1]
gi|218371349|emb|CAR19181.1| peptidase component of the HslUV protease [Escherichia coli IAI39]
gi|218434655|emb|CAR15588.1| peptidase component of the HslUV protease [Escherichia coli UMN026]
gi|222035644|emb|CAP78389.1| ATP-dependent protease hslV [Escherichia coli LF82]
gi|226838629|gb|EEH70658.1| ATP-dependent protease hslV [Escherichia sp. 1_1_43]
gi|238861982|gb|ACR63980.1| peptidase component of the HslUV protease [Escherichia coli BW2952]
gi|242379468|emb|CAQ34283.1| peptidase component of the HslVU protease, subunit of HslV hexamer
and HslVU protease [Escherichia coli BL21(DE3)]
gi|253326473|gb|ACT31075.1| 20S proteasome A and B subunits [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975783|gb|ACT41454.1| ATP-dependent protease peptidase subunit [Escherichia coli B str.
REL606]
gi|253979940|gb|ACT45610.1| ATP-dependent protease peptidase subunit [Escherichia coli
BL21(DE3)]
gi|254595334|gb|ACT74695.1| peptidase component of the HslUV protease [Escherichia coli O157:H7
str. TW14359]
gi|257756316|dbj|BAI27818.1| peptidase component HslV of the HslUV protease [Escherichia coli
O26:H11 str. 11368]
gi|257761795|dbj|BAI33292.1| peptidase component HslV of the HslUV protease [Escherichia coli
O103:H2 str. 12009]
gi|257767007|dbj|BAI38502.1| peptidase component HslV of the HslUV protease [Escherichia coli
O111:H- str. 11128]
gi|260451231|gb|ACX41653.1| 20S proteasome A and B subunits [Escherichia coli DH1]
gi|281181002|dbj|BAI57332.1| ATP-dependent protease peptidase subunit [Escherichia coli SE15]
gi|281603326|gb|ADA76310.1| ATP-dependent protease hslV [Shigella flexneri 2002017]
gi|284924032|emb|CBG37131.1| ATP-dependent protease (heat shock protein) [Escherichia coli 042]
gi|290765220|gb|ADD59181.1| ATP-dependent protease hslV [Escherichia coli O55:H7 str. CB9615]
gi|291321455|gb|EFE60894.1| ATP-dependent protease hslV [Escherichia coli B088]
gi|291425469|gb|EFE98508.1| ATP-dependent protease peptidase subunit [Escherichia coli
FVEC1412]
gi|291430957|gb|EFF03953.1| ATP-dependent protease hslV [Escherichia coli B185]
gi|291468120|gb|EFF10618.1| conserved hypothetical protein [Escherichia coli B354]
gi|298276334|gb|EFI17854.1| ATP-dependent protease hslV [Escherichia coli FVEC1302]
gi|299880565|gb|EFI88776.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 196-1]
gi|305852802|gb|EFM53249.1| ATP-dependent protease peptidase subunit [Escherichia coli NC101]
gi|306905420|gb|EFN35956.1| 20S proteasome A and B subunits [Escherichia coli W]
gi|307556075|gb|ADN48850.1| ATP-dependent hslVU protease peptidase subunit HslV [Escherichia
coli ABU 83972]
gi|309704357|emb|CBJ03706.1| ATP-dependent protease (heat shock protein) [Escherichia coli ETEC
H10407]
gi|312948507|gb|ADR29334.1| ATP-dependent protease peptidase subunit [Escherichia coli O83:H1
str. NRG 857C]
gi|315063263|gb|ADT77590.1| peptidase component of the HslUV protease [Escherichia coli W]
gi|315138498|dbj|BAJ45657.1| ATP-dependent protease hslV [Escherichia coli DH1]
gi|320198861|gb|EFW73459.1| ATP-dependent protease HslV [Escherichia coli EC4100B]
gi|320639184|gb|EFX08815.1| ATP-dependent protease subunit HslV [Escherichia coli O157:H7 str.
G5101]
gi|320644572|gb|EFX13629.1| ATP-dependent protease subunit HslV [Escherichia coli O157:H- str.
493-89]
gi|320649895|gb|EFX18407.1| ATP-dependent protease subunit HslV [Escherichia coli O157:H- str.
H 2687]
gi|320655296|gb|EFX23242.1| ATP-dependent protease subunit HslV [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660923|gb|EFX28369.1| ATP-dependent protease subunit HslV [Escherichia coli O55:H7 str.
USDA 5905]
gi|320665988|gb|EFX33011.1| ATP-dependent protease subunit HslV [Escherichia coli O157:H7 str.
LSU-61]
gi|323380672|gb|ADX52940.1| 20S proteasome A and B subunits [Escherichia coli KO11]
gi|323934422|gb|EGB30835.1| proteasome A-type and B-type [Escherichia coli E1520]
gi|323939014|gb|EGB35232.1| proteasome A-type and B-type [Escherichia coli E482]
gi|323943670|gb|EGB39776.1| proteasome A-type and B-type [Escherichia coli H120]
gi|323959299|gb|EGB54960.1| proteasome A-type and B-type [Escherichia coli H489]
gi|323964285|gb|EGB59768.1| proteasome A-type and B-type [Escherichia coli M863]
gi|323969684|gb|EGB64968.1| proteasome A-type and B-type [Escherichia coli TA007]
gi|323974341|gb|EGB69470.1| proteasome A-type and B-type [Escherichia coli TW10509]
gi|324111447|gb|EGC05428.1| proteasome A-type and B-type [Escherichia fergusonii B253]
gi|324115666|gb|EGC09602.1| proteasome A-type and B-type [Escherichia coli E1167]
gi|326342650|gb|EGD66423.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. 1125]
gi|327250570|gb|EGE62278.1| ATP-dependent protease hslV [Escherichia coli STEC_7v]
gi|330908253|gb|EGH36772.1| ATP-dependent protease HslV [Escherichia coli AA86]
gi|331036132|gb|EGI08368.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli H736]
gi|331041419|gb|EGI13569.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli M605]
gi|331046731|gb|EGI18816.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli M718]
gi|331052436|gb|EGI24473.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA206]
gi|331057272|gb|EGI29262.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA143]
gi|331062040|gb|EGI33963.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA271]
gi|331067487|gb|EGI38892.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA280]
gi|331072375|gb|EGI43708.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli H591]
gi|331077143|gb|EGI48358.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli H299]
gi|332105170|gb|EGJ08516.1| ATP-dependent protease peptidase subunit [Shigella sp. D9]
gi|332345928|gb|AEE59262.1| ATP-dependent protease HslV [Escherichia coli UMNK88]
gi|332751851|gb|EGJ82248.1| ATP-dependent protease hslV [Shigella flexneri K-671]
gi|332752625|gb|EGJ83011.1| ATP-dependent protease hslV [Shigella flexneri 2747-71]
gi|332998638|gb|EGK18235.1| ATP-dependent protease hslV [Shigella flexneri K-218]
gi|333013911|gb|EGK33273.1| ATP-dependent protease hslV [Shigella flexneri K-304]
Length = 176
Score = 213 bits (543), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 172
>gi|109900489|ref|YP_663744.1| ATP-dependent protease peptidase subunit [Pseudoalteromonas
atlantica T6c]
gi|123064030|sp|Q15N48|HSLV_PSEA6 RecName: Full=ATP-dependent protease subunit HslV
gi|109702770|gb|ABG42690.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Pseudoalteromonas atlantica T6c]
Length = 174
Score = 213 bits (542), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGNQVVIAGDGQVSLGNTVMKGNAKKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L R++VELAKDWR D+ LR LEA++ +AD+T + +ITG GDV++PEN ++
Sbjct: 62 ESKLEIHQGNLTRAAVELAKDWRTDRMLRKLEALLAVADETASFIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG +A +AA AL+ +T+ SAEEIA KA++IA +ICV+TNHN +E +
Sbjct: 122 AIGSGGPFAQAAASALLDNTELSAEEIAEKALTIAGNICVFTNHNHTVEKI 172
>gi|197287030|ref|YP_002152902.1| ATP-dependent protease peptidase subunit [Proteus mirabilis HI4320]
gi|227354725|ref|ZP_03839143.1| T01 family HslV component of HslUV peptidase (ClpQ) [Proteus
mirabilis ATCC 29906]
gi|238065930|sp|B4F172|HSLV_PROMH RecName: Full=ATP-dependent protease subunit HslV
gi|194684517|emb|CAR46301.1| ATP-dependent protease HslV (heat shock protein) [Proteus mirabilis
HI4320]
gi|227165168|gb|EEI49996.1| T01 family HslV component of HslUV peptidase (ClpQ) [Proteus
mirabilis ATCC 29906]
Length = 176
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETTSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARA++ +T SA EIA KA++IA DIC+YTNHN+ E +
Sbjct: 122 AIGSGGPYAQAAARAMLENTDLSAREIAEKALNIAGDICIYTNHNVNFEEI 172
>gi|56461558|ref|YP_156839.1| ATP-dependent protease peptidase subunit [Idiomarina loihiensis
L2TR]
gi|81599956|sp|Q5QV35|HSLV_IDILO RecName: Full=ATP-dependent protease subunit HslV
gi|56180568|gb|AAV83290.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Idiomarina
loihiensis L2TR]
Length = 185
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/169 (61%), Positives = 133/169 (78%), Gaps = 1/169 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VVI GDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGDKVVIGGDGQVSLGNTVMKGNARKVRRLYHDKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLEQ+ L+R++VELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PEN ++
Sbjct: 62 ESKLEQHQGNLMRAAVELAKDWRTDRALRRLEALLAVADKETSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLE 183
AIGSGG +A SAARAL+ +T +A +I +KA++IA DICVYTN N +E
Sbjct: 122 AIGSGGPFAQSAARALLENTDLNARDIVQKALTIAGDICVYTNGNQTIE 170
>gi|90022342|ref|YP_528169.1| ATP-dependent protease peptidase subunit [Saccharophagus degradans
2-40]
gi|122996025|sp|Q21H72|HSLV_SACD2 RecName: Full=ATP-dependent protease subunit HslV
gi|89951942|gb|ABD81957.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Saccharophagus degradans 2-40]
Length = 179
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR+ VVI GDGQVSLG T+MK NA KVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTILSVRRGNKVVIGGDGQVSLGNTIMKGNACKVRRLYKNQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE + QL+R++VELAKDWR D+ LR LEA++ +A+K +L++TG GDV++PE
Sbjct: 63 FERFEAKLEAHDGQLVRAAVELAKDWRTDRALRRLEALLAVANKDASLIVTGNGDVIQPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
N ++AIGSGG++A SAARAL+ +T+ A +I K++ IA D+CVYTNH+ +E L
Sbjct: 123 NDLIAIGSGGAFAQSAARALLENTELEARDIVEKSLGIAGDVCVYTNHHFTIEEL 177
>gi|261346863|ref|ZP_05974507.1| ATP-dependent protease HslVU, peptidase subunit [Providencia
rustigianii DSM 4541]
gi|282565043|gb|EFB70578.1| ATP-dependent protease HslVU, peptidase subunit [Providencia
rustigianii DSM 4541]
Length = 176
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADEHTSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T SA+EIA KA+ IA DIC+YTNHN+ E +
Sbjct: 122 AIGSGGPYAQSAARALLENTDLSAKEIAEKALEIAGDICIYTNHNVNFEEI 172
>gi|300721289|ref|YP_003710560.1| peptidase component of the HslUV protease [Xenorhabdus nematophila
ATCC 19061]
gi|297627777|emb|CBJ88308.1| peptidase component of the HslUV protease [Xenorhabdus nematophila
ATCC 19061]
Length = 176
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGKVVIGGDGQATMGHTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGGSYA +AARA++ T + A EI +A+SIAADIC+YTNHN E L
Sbjct: 122 AIGSGGSYAQAAARAMLETTDLGAREITERALSIAADICIYTNHNHNFEEL 172
>gi|212712510|ref|ZP_03320638.1| hypothetical protein PROVALCAL_03605 [Providencia alcalifaciens DSM
30120]
gi|212684726|gb|EEB44254.1| hypothetical protein PROVALCAL_03605 [Providencia alcalifaciens DSM
30120]
Length = 176
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADEHTSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T SA EIA KA++IA DIC+YTNHN+ E +
Sbjct: 122 AIGSGGPYAQSAARALLENTDLSAREIAEKALAIAGDICIYTNHNVNFEEI 172
>gi|224826712|ref|ZP_03699812.1| 20S proteasome A and B subunits [Lutiella nitroferrum 2002]
gi|224600932|gb|EEG07115.1| 20S proteasome A and B subunits [Lutiella nitroferrum 2002]
Length = 178
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI++VR+ V + GDGQV+LG V+KA ARKVRRL ++AGFAG +ADAFTL
Sbjct: 3 QFDGTTIVSVRRGQRVALGGDGQVTLGNIVIKATARKVRRLYHDKVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+RS+VELAKDWR D+ LR LEAM+++ADK TL+ITG GDVLEPE
Sbjct: 63 FERFEAKLEKHQGHLVRSAVELAKDWRTDRMLRRLEAMLIVADKESTLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ AIGSGG+YA SAARAL +T+ + +K++ IA DIC+YTNHN ++ETL
Sbjct: 123 QGIAAIGSGGAYAQSAARALFENTELDPAVVVKKSLEIAGDICIYTNHNHLIETL 177
>gi|237749449|ref|ZP_04579929.1| ATP-dependent protease peptidase subunit [Oxalobacter formigenes
OXCC13]
gi|229380811|gb|EEO30902.1| ATP-dependent protease peptidase subunit [Oxalobacter formigenes
OXCC13]
Length = 178
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG V+K ARKVR+L G ++AGFAG +ADAFTL
Sbjct: 3 QFHGTTIVSVRRGSTVALGGDGQVTLGNIVIKGTARKVRKLYNGRVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ER E KLE++ LLRSSVELAKDWR D+ LR LEAM+L+AD+ TLVITG GDVLEPE
Sbjct: 63 IERFEAKLEKHQGNLLRSSVELAKDWRTDRMLRRLEAMLLVADRESTLVITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV AIGSGG+YA SAA AL+ +T EI KA+ IA D+C+YTN ++ETL
Sbjct: 123 EGVGAIGSGGAYAQSAALALVRNTDLPPAEIISKALGIAGDLCIYTNQAHIIETL 177
>gi|56476922|ref|YP_158511.1| ATP-dependent protease peptidase subunit [Aromatoleum aromaticum
EbN1]
gi|81598845|sp|Q5P502|HSLV_AZOSE RecName: Full=ATP-dependent protease subunit HslV
gi|56312965|emb|CAI07610.1| putative heat shock protein [Aromatoleum aromaticum EbN1]
Length = 179
Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG V+KA ARKVR + +G I+AGFAG +ADAFTL
Sbjct: 3 QYHGTTILSVRRGRRVALGGDGQVTLGNVVIKATARKVRPIYQGRILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ +LRS+VELAKDWR D+ LR LEAM+ +AD +LVITG GDVLEPE
Sbjct: 63 FERFEAKLEKHQGNVLRSAVELAKDWRTDRMLRRLEAMLAVADPDNSLVITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G++AIGSGG+YA SAARAL+ +T EEI +K++ IA D+C+YTN + V+E L+
Sbjct: 123 QGIVAIGSGGAYAQSAARALLENTALPPEEIVKKSLQIAGDLCIYTNQSHVIEVLE 178
>gi|296105370|ref|YP_003615516.1| ATP-dependent HslUV protease, peptidase subunit HslV [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295059829|gb|ADF64567.1| ATP-dependent HslUV protease, peptidase subunit HslV [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 176
Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T +A +IA KA+ IA DIC+YTNHN +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTDMNARDIAVKALDIAGDICIYTNHNHTIEEL 172
>gi|218674879|ref|ZP_03524548.1| ATP-dependent protease peptidase subunit [Rhizobium etli GR56]
Length = 125
Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/124 (81%), Positives = 114/124 (91%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121
Query: 136 AIGS 139
AIGS
Sbjct: 122 AIGS 125
>gi|217978697|ref|YP_002362844.1| ATP-dependent protease peptidase subunit [Methylocella silvestris
BL2]
gi|217504073|gb|ACK51482.1| 20S proteasome A and B subunits [Methylocella silvestris BL2]
Length = 188
Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 140/176 (79%), Gaps = 4/176 (2%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V+KDG VI GDGQVS+GQT++K NA+KVRRL KG +I GFAG++ADAFTL E
Sbjct: 10 HGTTIVLVKKDGRTVIGGDGQVSIGQTIVKGNAKKVRRLAKGEVIGGFAGATADAFTLFE 69
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-- 131
RLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+AD LV+TG GDVLEPE
Sbjct: 70 RLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADAKAALVLTGNGDVLEPEAT 129
Query: 132 --NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VM IGSGG+YAL+AARAL+ T A IAR+A+ IA++ICVYTN ++V+E +
Sbjct: 130 ERGSVMGIGSGGNYALAAARALLDTDRDAAAIARRALEIASEICVYTNRSVVIEEI 185
>gi|332308410|ref|YP_004436261.1| 20S proteasome A and B subunits [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332175739|gb|AEE24993.1| 20S proteasome A and B subunits [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 174
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGNQVVIAGDGQVSLGNTVMKGNAKKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L R++VELAKDWR D+ LR LEA++ +AD+T + +ITG GDV++PEN ++
Sbjct: 62 ESKLEIHQGNLTRAAVELAKDWRTDRMLRKLEALLAVADETASFIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG +A SAA AL+ +T+ SAEEIA KA++IA +ICV+TNH+ +E +
Sbjct: 122 AIGSGGPFAQSAASALLDNTELSAEEIAEKALTIAGNICVFTNHSHTIEKI 172
>gi|257095383|ref|YP_003169024.1| ATP-dependent protease peptidase subunit [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047907|gb|ACV37095.1| 20S proteasome A and B subunits [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 179
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG V+KA+ARKVRR+ +G I+AGFAG +ADAFTL
Sbjct: 3 QYHGTTILSVRRGSRVAMGGDGQVTLGNLVIKASARKVRRIHQGRILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+++ LLRS+VELAKDWR D+ LR LEAM+ +AD+ +L+ITG GDV+EPE
Sbjct: 63 FERFEAKLDKHQGNLLRSAVELAKDWRSDRALRRLEAMLAVADRDNSLIITGNGDVVEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG++A SAARAL+ +++ E+ RK++ IA+++C+YTN N +E L+
Sbjct: 123 HGIVAIGSGGAFAQSAARALVENSELDPAEVVRKSLQIASELCIYTNQNFTIEVLE 178
>gi|237747302|ref|ZP_04577782.1| ATP-dependent protease peptidase subunit [Oxalobacter formigenes
HOxBLS]
gi|229378653|gb|EEO28744.1| ATP-dependent protease peptidase subunit [Oxalobacter formigenes
HOxBLS]
Length = 178
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG V+K ARKVR+L G ++AGFAG +ADAFTL
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVIKGTARKVRKLYNGRVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ER E KLE++ LLRSSVELAKDWR D+ LR LEAM+L+AD+ TLVITG GDVLEPE
Sbjct: 63 IERFEAKLEKHQGNLLRSSVELAKDWRTDRILRRLEAMLLVADRESTLVITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV AIGSGG+YA SAA AL +T+ EI K+++IA D+C+YTN ++ETL
Sbjct: 123 EGVGAIGSGGAYAQSAALALQRNTELPPAEIVSKSLAIAGDLCIYTNQAHIIETL 177
>gi|319789317|ref|YP_004150950.1| 20S proteasome A and B subunits [Thermovibrio ammonificans HB-1]
gi|317113819|gb|ADU96309.1| 20S proteasome A and B subunits [Thermovibrio ammonificans HB-1]
Length = 176
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 133/174 (76%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTI V +DG V +AGDGQV+LG TV K ARKVR+L G ++AGFAGS ADAF+LL
Sbjct: 3 FHGTTICAVLRDGKVAMAGDGQVTLGNTVFKNGARKVRKLYGGRVLAGFAGSVADAFSLL 62
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KL+ Y LL+S+VELAKDWR D+ LR LEAM+L+ADK+ L+I+G GDV+EP+
Sbjct: 63 ERFEDKLQTYGGNLLKSAVELAKDWRTDRILRRLEAMLLVADKSRILLISGNGDVIEPDI 122
Query: 133 GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VMA+GSGG YA +AA AL +T+ A EIARKA+ IA +IC+YTN NIV+E L
Sbjct: 123 PVMAVGSGGPYAQAAATALYQNTELPAAEIARKALEIAGNICIYTNTNIVVEEL 176
>gi|253991722|ref|YP_003043078.1| ATP-dependent protease peptidase subunit [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|211638497|emb|CAR67118.1| atp-dependent protease hslv (ec 3.4.25.-) (heat shock protein hslv)
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253783172|emb|CAQ86337.1| ATP-dependent protease [Photorhabdus asymbiotica]
Length = 176
Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADENSSLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARA++ N SA EIA KA++IA DIC+YTNHN E L
Sbjct: 122 AIGSGGPYAQAAARAMLENTNLSAREIAEKALTIAGDICIYTNHNHNFEEL 172
>gi|332286550|ref|YP_004418461.1| ATP-dependent protease peptidase subunit [Pusillimonas sp. T7-7]
gi|330430503|gb|AEC21837.1| ATP-dependent protease peptidase subunit [Pusillimonas sp. T7-7]
Length = 177
Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K ARK+RRL I+AGFAG++ADAFTL
Sbjct: 3 QFHATTIICVRRGEHVALGGDGQVTLGNIVIKGTARKIRRLYNDKILAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+RS+VEL KDWR D+ LR LEAM+++ADK TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGNLMRSAVELTKDWRTDRVLRRLEAMLIVADKEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
NG+ AIGSGG+YA SAA AL+ ST + +I +K++ IA D+C+YTN N ++ETL
Sbjct: 123 NGLAAIGSGGAYAQSAALALLQSTDMAPADIVKKSLEIAGDLCIYTNQNHIVETL 177
>gi|120609504|ref|YP_969182.1| ATP-dependent protease peptidase subunit [Acidovorax citrulli
AAC00-1]
gi|120587968|gb|ABM31408.1| HslV component of HslUV peptidase [Acidovorax citrulli AAC00-1]
Length = 194
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 140/180 (77%), Gaps = 6/180 (3%)
Query: 12 KMHATTILTVRK---DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+ H TTIL+VR+ DG V I GDGQV+LG V+K +ARKVR+L G ++AGFAG++A
Sbjct: 15 QFHGTTILSVRRQAADGTIQVAIGGDGQVTLGNIVVKGSARKVRKLHHGKVLAGFAGATA 74
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ER E KLE++ L R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GD
Sbjct: 75 DAFTLFERFEGKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADASASLIITGNGD 134
Query: 127 VLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE G++AIGSGG+YA SAA+AL++ T+ SAEEI RK+++IA ++C+YTN + +ETL
Sbjct: 135 VLEPEQGIVAIGSGGAYAHSAAKALLNHTELSAEEIVRKSLAIAGELCIYTNMHHTVETL 194
>gi|315178883|gb|ADT85797.1| ATP-dependent protease peptidase subunit [Vibrio furnissii NCTC
11218]
Length = 185
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG++A +AA AL+ +T A EIA+KA+ IA DICV+TNH+ +E L++ E
Sbjct: 122 AIGSGGNFAQAAAIALLENTDLDAREIAQKALKIAGDICVFTNHHHTIEELEIPPE 177
>gi|237728046|ref|ZP_04558527.1| heat shock protein [Citrobacter sp. 30_2]
gi|226910303|gb|EEH96221.1| heat shock protein [Citrobacter sp. 30_2]
Length = 176
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 172
>gi|229593534|ref|YP_001454589.2| ATP-dependent protease peptidase subunit [Citrobacter koseri ATCC
BAA-895]
Length = 176
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 172
>gi|146313673|ref|YP_001178747.1| ATP-dependent protease peptidase subunit [Enterobacter sp. 638]
gi|166918422|sp|A4WG66|HSLV_ENT38 RecName: Full=ATP-dependent protease subunit HslV
gi|145320549|gb|ABP62696.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Enterobacter sp. 638]
Length = 176
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALGIAGDICIYTNHFHTIEEL 172
>gi|110835105|ref|YP_693964.1| ATP-dependent protease peptidase subunit [Alcanivorax borkumensis
SK2]
gi|254429309|ref|ZP_05043016.1| peptidase, T1 family [Alcanivorax sp. DG881]
gi|123345320|sp|Q0VMA6|HSLV_ALCBS RecName: Full=ATP-dependent protease subunit HslV
gi|110648216|emb|CAL17692.1| heat shock protein HslV [Alcanivorax borkumensis SK2]
gi|196195478|gb|EDX90437.1| peptidase, T1 family [Alcanivorax sp. DG881]
Length = 180
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 134/176 (76%), Gaps = 2/176 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI++VR+ VVI GDGQVSLG TVMK NARKVRRL G +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTIVSVRRGNNVVIGGDGQVSLGNTVMKGNARKVRRLFHGKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E +LE++ L+R++VELAKDWR D+ LR LEA++ +ADK +L+ITG GDV+EPE
Sbjct: 63 FERFEAQLEKHQGHLVRAAVELAKDWRTDRALRRLEALLAVADKESSLIITGNGDVIEPE 122
Query: 132 -NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG +A SAA AL+ +T A +I KA++IA DIC+YTNHN E L
Sbjct: 123 KDGLIAIGSGGPFAQSAATALLDNTDLPARDIVAKALTIAGDICIYTNHNHTFEEL 178
>gi|219669730|ref|YP_002460165.1| ATP-dependent protease peptidase subunit [Desulfitobacterium
hafniense DCB-2]
gi|254802410|sp|B8FRG9|HSLV_DESHD RecName: Full=ATP-dependent protease subunit HslV
gi|219539990|gb|ACL21729.1| 20S proteasome A and B subunits [Desulfitobacterium hafniense
DCB-2]
Length = 176
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 137/175 (78%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V +AGDGQV++GQ TVMK ARKVRRL G ++AGFAGS ADAFTL
Sbjct: 2 FHATTIVAVKKGDQVAMAGDGQVTMGQATVMKHKARKVRRLFHGKVLAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAKDWRMDK LRNLEA++++ADK L+I+G G+V+EP+
Sbjct: 62 FEKFENKLEEYQGNLQRAAVELAKDWRMDKALRNLEALLIVADKQSMLLISGSGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YAL+AARAL+ +T ++ ++AM +A+ ICVYTN I++E L
Sbjct: 122 DGIAAIGSGGNYALAAARALVKNTDLQPAQLVQEAMEVASSICVYTNDQIIVEEL 176
>gi|261254141|ref|ZP_05946714.1| ATP-dependent protease HslV [Vibrio orientalis CIP 102891]
gi|260937532|gb|EEX93521.1| ATP-dependent protease HslV [Vibrio orientalis CIP 102891]
Length = 180
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/173 (57%), Positives = 138/173 (79%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL E+
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG++A +AA AL+ +T+ A EIA K+++IA DICV+TNH+ +E L++
Sbjct: 122 AIGSGGNFAQAAATALLENTELDAREIAEKSLTIAGDICVFTNHHHTIEELEI 174
>gi|226938938|ref|YP_002794009.1| ATP-dependent protease peptidase subunit [Laribacter hongkongensis
HLHK9]
gi|226713862|gb|ACO73000.1| HslV [Laribacter hongkongensis HLHK9]
Length = 241
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 135/180 (75%), Gaps = 1/180 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H + TTI++VR+ V + GDGQV+LG V+KA ARKVRRL ++AGFAG +A
Sbjct: 62 EHSMQQFDGTTIVSVRRGNQVALGGDGQVTLGNIVIKATARKVRRLFNDTVLAGFAGGTA 121
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL+ER E KL++Y L S++ELAKDWR D+ LR LEAM+++AD TLVITG GD
Sbjct: 122 DAFTLIERFEAKLQKYQGNLTISAIELAKDWRSDRALRRLEAMLIVADLERTLVITGNGD 181
Query: 127 VLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE G+ AIGSGG+YA SAARAL+ +T+ +I +K++ IA DIC+YTNHN V+ETL
Sbjct: 182 VLEPEQGIAAIGSGGAYAQSAARALLENTELPPADIVKKSLEIAGDICIYTNHNHVIETL 241
>gi|212703173|ref|ZP_03311301.1| hypothetical protein DESPIG_01215 [Desulfovibrio piger ATCC 29098]
gi|212673439|gb|EEB33922.1| hypothetical protein DESPIG_01215 [Desulfovibrio piger ATCC 29098]
Length = 178
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 136/177 (76%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
++ HATTIL V+KDG V +AGDGQV+LGQ+ +MK ARKVRRL G I+AGFAG++ADAF
Sbjct: 2 IETHATTILAVKKDGQVAMAGDGQVTLGQSMIMKHTARKVRRLYDGKIVAGFAGATADAF 61
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E E KL+++ L RS+VEL K+WR DKYLR LEAM+L++D L+++G GDV E
Sbjct: 62 TLFELFEAKLKEFRGNLQRSAVELTKEWRKDKYLRRLEAMLLVSDGEHILLLSGNGDVFE 121
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ V AIGSGG YALSAARAL+ A E+A ++M IA++ICVYTN + V+ETL
Sbjct: 122 PDDDVAAIGSGGPYALSAARALLRHSTLPARELALESMKIASEICVYTNDHFVVETL 178
>gi|312882761|ref|ZP_07742495.1| ATP-dependent protease peptidase subunit [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309369545|gb|EFP97063.1| ATP-dependent protease peptidase subunit [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 182
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/173 (57%), Positives = 138/173 (79%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAGS+ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGSTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG++A +AA AL+ +++ A EIA K++ IA DICV+TNH+ +E L++
Sbjct: 122 AIGSGGNFAQAAATALLENSELDAREIAEKSLKIAGDICVFTNHHHTIEELEI 174
>gi|114564916|ref|YP_752430.1| ATP-dependent protease peptidase subunit [Shewanella frigidimarina
NCIMB 400]
gi|122298446|sp|Q07WM3|HSLV_SHEFN RecName: Full=ATP-dependent protease subunit HslV
gi|114336209|gb|ABI73591.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella frigidimarina NCIMB 400]
Length = 174
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + LL+S+VELAKDWR DK LR LEAM+++AD +L+ITG GDV++PE ++
Sbjct: 62 EAKLEMHQGHLLKSAVELAKDWRSDKMLRKLEAMLVVADTESSLIITGNGDVVQPEYDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA ++A AL+ +T+ SAEEIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNYAHASALALLQNTELSAEEIAEKSLTIAGDICVFTNQFKTIEKL 172
>gi|220933248|ref|YP_002512147.1| 20S proteasome A and B subunits [Thioalkalivibrio sp. HL-EbGR7]
gi|254765620|sp|B8GTA0|HSLV_THISH RecName: Full=ATP-dependent protease subunit HslV
gi|219994558|gb|ACL71160.1| 20S proteasome A and B subunits [Thioalkalivibrio sp. HL-EbGR7]
Length = 177
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI+ VR++G V + GDGQV+LG TVMK NARKVRRL ++AGFAG +ADAFTL
Sbjct: 3 QFRGTTIVCVRRNGRVALGGDGQVTLGNTVMKGNARKVRRLYGDKVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE+Y L R++VELAKDWR ++ LR LEA++ +ADK +L+ITG GDV+EPE
Sbjct: 63 FERFEGKLEKYSGNLTRAAVELAKDWRTERALRRLEALLAVADKETSLLITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++A+GSGG +A +AARAL+ +T+ SA EIA +A++IAADIC+YTN ++ +E +
Sbjct: 123 DNLIAMGSGGPFAQAAARALLDNTELSAREIAERALNIAADICIYTNRHLTIEEM 177
>gi|317050676|ref|YP_004111792.1| 20S proteasome subunits A/B [Desulfurispirillum indicum S5]
gi|316945760|gb|ADU65236.1| 20S proteasome A and B subunits [Desulfurispirillum indicum S5]
Length = 175
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 136/171 (79%), Gaps = 1/171 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI+ VR+DG V + GDGQV+LG TVMKA A+KVR L G +I+GFAGS+ADAF L
Sbjct: 2 FKGTTIVCVRRDGRVALGGDGQVTLGNTVMKATAKKVRTLADGAVISGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E KL+++ N L R++VE+AKDWR D+ LR LEAM+++AD+ + +I+G GD++EPE+
Sbjct: 62 EKFEGKLKKHGNILTRAAVEMAKDWRSDRILRRLEAMLIVADRENSFIISGTGDIVEPED 121
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVL 182
G++AIGSGGSYA++AARAL +T +A +IARK++ IAADIC+Y+N NI +
Sbjct: 122 GILAIGSGGSYAMAAARALRENTDLTAVDIARKSLEIAADICIYSNRNITI 172
>gi|228879511|ref|YP_001572521.2| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|283787387|ref|YP_003367252.1| ATP-dependent protease (heat shock protein) [Citrobacter rodentium
ICC168]
gi|282950841|emb|CBG90518.1| ATP-dependent protease (heat shock protein) [Citrobacter rodentium
ICC168]
Length = 176
Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 172
>gi|16762343|ref|NP_457960.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|16767358|ref|NP_462973.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|29143831|ref|NP_807173.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|56415936|ref|YP_153011.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|62182551|ref|YP_218968.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161617228|ref|YP_001591193.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Paratyphi B str. SPB7]
gi|167551411|ref|ZP_02345166.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167991668|ref|ZP_02572767.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168233037|ref|ZP_02658095.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168237719|ref|ZP_02662777.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168244149|ref|ZP_02669081.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168263002|ref|ZP_02684975.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168467438|ref|ZP_02701275.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168821554|ref|ZP_02833554.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194446683|ref|YP_002043355.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194448660|ref|YP_002048095.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194468779|ref|ZP_03074763.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194737361|ref|YP_002117013.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197248081|ref|YP_002149020.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197264283|ref|ZP_03164357.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197364863|ref|YP_002144500.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|198242693|ref|YP_002218018.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|200387634|ref|ZP_03214246.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204930332|ref|ZP_03221309.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|207859279|ref|YP_002245930.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|213022301|ref|ZP_03336748.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. 404ty]
gi|213161767|ref|ZP_03347477.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
gi|213416545|ref|ZP_03349689.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E01-6750]
gi|213426206|ref|ZP_03358956.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213615558|ref|ZP_03371384.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E98-2068]
gi|213648008|ref|ZP_03378061.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. J185]
gi|224585903|ref|YP_002639702.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|238912238|ref|ZP_04656075.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|289828421|ref|ZP_06546303.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E98-3139]
gi|291084784|ref|ZP_06542259.2| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. AG3]
gi|61226073|sp|P0A271|HSLV_SALTY RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|61226074|sp|P0A272|HSLV_SALTI RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|75479325|sp|Q57HC5|HSLV_SALCH RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|81599678|sp|Q5PK45|HSLV_SALPA RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|189036236|sp|A9MZI2|HSLV_SALPB RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065934|sp|B5F0S3|HSLV_SALA4 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065935|sp|B5FPU1|HSLV_SALDC RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065936|sp|B5QXM1|HSLV_SALEP RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065938|sp|B4TCM9|HSLV_SALHS RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065939|sp|B4T0T9|HSLV_SALNS RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065940|sp|B4TPV3|HSLV_SALSV RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238690773|sp|B5BJK9|HSLV_SALPK RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|254802422|sp|C0Q442|HSLV_SALPC RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|25513410|pir||AI0938 heat shock protein [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|9650895|emb|CAC00719.1| heat shock protein [Salmonella typhimurium]
gi|16422659|gb|AAL22932.1| peptidase component of the HslUV protease [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16504647|emb|CAD09531.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29139467|gb|AAO71033.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|56130193|gb|AAV79699.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62130184|gb|AAX67887.1| peptidase component of the HslUV protease [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161366592|gb|ABX70360.1| hypothetical protein SPAB_05069 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194405346|gb|ACF65568.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194406964|gb|ACF67183.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194455143|gb|EDX43982.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194712863|gb|ACF92084.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195630183|gb|EDX48823.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197096340|emb|CAR61944.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197211784|gb|ACH49181.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197242538|gb|EDY25158.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197289401|gb|EDY28766.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197937209|gb|ACH74542.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199604732|gb|EDZ03277.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204320736|gb|EDZ05938.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205323731|gb|EDZ11570.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205329973|gb|EDZ16737.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205332762|gb|EDZ19526.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205336922|gb|EDZ23686.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205341786|gb|EDZ28550.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205348259|gb|EDZ34890.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206711082|emb|CAR35456.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224470431|gb|ACN48261.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|261249208|emb|CBG27070.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267996392|gb|ACY91277.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301160599|emb|CBW20130.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312915208|dbj|BAJ39182.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|320088503|emb|CBY98262.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321225384|gb|EFX50442.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322613145|gb|EFY10089.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|322619227|gb|EFY16110.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|322626094|gb|EFY22906.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|322626446|gb|EFY23252.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|322632440|gb|EFY29188.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|322635078|gb|EFY31799.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|322642720|gb|EFY39310.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|322646454|gb|EFY42965.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322650758|gb|EFY47159.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|322652942|gb|EFY49279.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322657256|gb|EFY53536.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322662256|gb|EFY58471.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|322666789|gb|EFY62965.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|322672061|gb|EFY68176.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|322675782|gb|EFY71854.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|322681801|gb|EFY77827.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|322684003|gb|EFY80012.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|322717049|gb|EFZ08620.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. A50]
gi|323132438|gb|ADX19868.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 4/74]
gi|323193275|gb|EFZ78490.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|323197632|gb|EFZ82765.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|323200793|gb|EFZ85864.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|323207201|gb|EFZ92153.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|323211404|gb|EFZ96245.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|323218551|gb|EGA03259.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|323220967|gb|EGA05399.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|323225944|gb|EGA10163.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|323231623|gb|EGA15735.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|323236129|gb|EGA20207.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|323239450|gb|EGA23499.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|323243957|gb|EGA27968.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|323249319|gb|EGA33236.1| ATP-dependent protease subunit HslV [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250438|gb|EGA34321.1| ATP-dependent protease subunit HslV [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258892|gb|EGA42544.1| ATP-dependent protease subunit HslV [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260136|gb|EGA43759.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|323265255|gb|EGA48752.1| ATP-dependent protease subunit HslV [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323270477|gb|EGA53923.1| ATP-dependent protease subunit HslV [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326625810|gb|EGE32155.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Dublin str. 3246]
gi|332990921|gb|AEF09904.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
Length = 176
Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 172
>gi|89895296|ref|YP_518783.1| ATP-dependent protease peptidase subunit [Desulfitobacterium
hafniense Y51]
gi|122482355|sp|Q24UF3|HSLV_DESHY RecName: Full=ATP-dependent protease subunit HslV
gi|89334744|dbj|BAE84339.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 176
Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 137/175 (78%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V +AGDGQV++GQ TVMK ARKVRRL G ++AGFAGS ADAFTL
Sbjct: 2 FHATTIVAVKKGEQVAMAGDGQVTMGQATVMKHKARKVRRLFHGKVLAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAKDWRMDK LRNLEA++++ADK L+I+G G+V+EP+
Sbjct: 62 FEKFENKLEEYQGNLQRAAVELAKDWRMDKALRNLEALLIVADKQSMLLISGSGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YAL+AARAL+ +T ++ ++AM +A+ ICVYTN I++E L
Sbjct: 122 DGIAAIGSGGNYALAAARALVKNTDLQPAQLVQEAMEVASSICVYTNDQIIVEEL 176
>gi|254448912|ref|ZP_05062367.1| ATP-dependent protease HslV [gamma proteobacterium HTCC5015]
gi|198261449|gb|EDY85739.1| ATP-dependent protease HslV [gamma proteobacterium HTCC5015]
Length = 177
Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 133/174 (76%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TTIL V++ VVI GDGQVS+G TVMK NARKVRRL G ++AGFAG++ADAFTL
Sbjct: 4 LHGTTILGVQRGDDVVIGGDGQVSMGNTVMKGNARKVRRLYGGRVLAGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E KLEQ+ L R++VELAKDWR DK LRNLEA++++ + LVI+G GDV+EPE+
Sbjct: 64 EKFEGKLEQHNGNLTRAAVELAKDWRTDKVLRNLEALLIVGSQEGLLVISGNGDVIEPED 123
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG +A SAA+AL +T+ A E+ +++ IA DICV+TNHN+ +E L
Sbjct: 124 SFIAIGSGGQFAQSAAKALYENTELGAREVVERSLHIAGDICVFTNHNLTIEEL 177
>gi|134299828|ref|YP_001113324.1| ATP-dependent protease peptidase subunit [Desulfotomaculum reducens
MI-1]
gi|189028445|sp|A4J5Z6|HSLV_DESRM RecName: Full=ATP-dependent protease subunit HslV
gi|134052528|gb|ABO50499.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Desulfotomaculum reducens MI-1]
Length = 176
Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 135/175 (77%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V++ V +AGDGQV+ GQ T+MK ARKVRRL G ++AGFAGS ADAFTL
Sbjct: 2 FHATTIVAVKRGTKVAVAGDGQVTFGQNTIMKHTARKVRRLHNGQVLAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L+R++VELAK WR DKYLR LEAM+++A++ LV++G G+V+EP+
Sbjct: 62 FEKFEGKLEEYHGNLMRAAVELAKAWRTDKYLRTLEAMLIVANQEHLLVLSGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
GV AIGSGG YAL+AARAL N S ++I +A+++AADICVYTN NIV+E +
Sbjct: 122 EGVTAIGSGGPYALAAARALTKHTNLSPKDITYEALNLAADICVYTNKNIVVEEI 176
>gi|332187360|ref|ZP_08389098.1| proteasome A-type and B-type family protein [Sphingomonas sp. S17]
gi|332012521|gb|EGI54588.1| proteasome A-type and B-type family protein [Sphingomonas sp. S17]
Length = 153
Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/149 (69%), Positives = 128/149 (85%)
Query: 37 LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD 96
+GQTVMK NARKVRRLG G++I GFAG++ADAFTL ERLE KLE++ QLLR++VELAKD
Sbjct: 1 MGQTVMKPNARKVRRLGDGSVIGGFAGATADAFTLFERLEAKLERHNGQLLRAAVELAKD 60
Query: 97 WRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
WR DK+LRNLEAM+++ADK +TL++TG GDVLEPENG+ AIGSGG+YAL+AARAL +
Sbjct: 61 WRTDKFLRNLEAMMIVADKDVTLILTGNGDVLEPENGICAIGSGGNYALAAARALDDYEQ 120
Query: 157 SAEEIARKAMSIAADICVYTNHNIVLETL 185
AE IARKAM+IAAD+CVYTN + LE +
Sbjct: 121 DAETIARKAMAIAADVCVYTNDRVTLEAI 149
>gi|254508193|ref|ZP_05120318.1| ATP-dependent protease HslV [Vibrio parahaemolyticus 16]
gi|219548915|gb|EED25915.1| ATP-dependent protease HslV [Vibrio parahaemolyticus 16]
Length = 181
Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL E+
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG++A +AA AL+ +T+ A EIA K++ IA DICV+TNH+ +E L++ E
Sbjct: 122 AIGSGGNFAQAAATALLENTELDAREIAEKSLKIAGDICVFTNHHHTIEELEIPAE 177
>gi|119470417|ref|ZP_01613145.1| ATP-dependent protease peptidase subunit [Alteromonadales bacterium
TW-7]
gi|119446342|gb|EAW27618.1| ATP-dependent protease peptidase subunit [Alteromonadales bacterium
TW-7]
Length = 172
Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+D VVI GDGQVSLG TVMK NARKVRRL G +IAGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRDNKVVIGGDGQVSLGNTVMKGNARKVRRLYNGKVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L +++VE+AKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLEMHQGNLTKAAVEMAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T SA EI K+++IA DICV+TN+ +E L
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAREIVEKSLTIAGDICVFTNNFQTIEEL 172
>gi|221065127|ref|ZP_03541232.1| 20S proteasome A and B subunits [Comamonas testosteroni KF-1]
gi|264680257|ref|YP_003280167.1| 20S proteasome, A and B subunits [Comamonas testosteroni CNB-2]
gi|299533129|ref|ZP_07046514.1| ATP-dependent protease peptidase subunit [Comamonas testosteroni
S44]
gi|220710150|gb|EED65518.1| 20S proteasome A and B subunits [Comamonas testosteroni KF-1]
gi|262210773|gb|ACY34871.1| 20S proteasome, A and B subunits [Comamonas testosteroni CNB-2]
gi|298718906|gb|EFI59878.1| ATP-dependent protease peptidase subunit [Comamonas testosteroni
S44]
Length = 181
Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 140/179 (78%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRK---DGV-VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTIL+VR+ +GV V I GDGQV+LG V+K ARKVR+L G ++AGFAG++AD
Sbjct: 3 QFHGTTILSVRRQTPEGVQVAIGGDGQVTLGNIVIKGTARKVRKLYHGKVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ L R+++EL K+WR D+ LR LEAM+ +AD T +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGNLTRAAIELTKEWRTDRVLRKLEAMLAVADATTSLIITGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE G++AIGSGG+YA SAA+AL+ +T+ SAE++ RK+++IA ++C+YTN N +ETL
Sbjct: 123 LEPEQGIVAIGSGGAYAHSAAKALLNNTELSAEDVVRKSLAIAGELCIYTNMNHTIETL 181
>gi|239813915|ref|YP_002942825.1| ATP-dependent protease peptidase subunit [Variovorax paradoxus
S110]
gi|259491400|sp|C5CNE3|HSLV_VARPS RecName: Full=ATP-dependent protease subunit HslV
gi|239800492|gb|ACS17559.1| 20S proteasome A and B subunits [Variovorax paradoxus S110]
Length = 181
Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 103/179 (57%), Positives = 137/179 (76%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRKDGV----VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTI++VR+ V I GDGQV+LG V+K ARKVRRL G ++AGFAG++AD
Sbjct: 3 QFHGTTIVSVRRKTPQGDQVAIGGDGQVTLGNIVIKGTARKVRRLYHGKVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ L R++VEL KDWR D+ LR LEAM+ +AD T +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGHLTRAAVELTKDWRTDRVLRKLEAMLAVADATTSLIITGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE+GV+AIGSGG+YA SAA+AL+ +T+ +AE+I RK+++IA +IC+YTN N +E L
Sbjct: 123 LEPEDGVIAIGSGGAYAQSAAKALIDNTELTAEQIVRKSLAIAGEICIYTNMNHTVEAL 181
>gi|51246548|ref|YP_066432.1| ATP-dependent protease peptidase subunit [Desulfotalea psychrophila
LSv54]
gi|50877585|emb|CAG37425.1| probable ATP-dependent protease HslV, protease subunit
[Desulfotalea psychrophila LSv54]
Length = 198
Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 136/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TTIL +R G VV+AGDGQVS+G TVMK NARKVRRL +I GFAG++ADAFTL
Sbjct: 24 KIRSTTILAIRHKGEVVVAGDGQVSMGNTVMKHNARKVRRLYHDQVITGFAGATADAFTL 83
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++LE+KLEQY L+R++VELAK+WR DK LR LEA+++ ADK +L+++G GDV+E +
Sbjct: 84 FDKLEEKLEQYNGNLMRAAVELAKEWRTDKMLRKLEALLIAADKDYSLLLSGTGDVIESD 143
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
GV++IGSGG YA +AA AL+ + A EIA+ +M IAADICV+TNH+ +E +
Sbjct: 144 TGVLSIGSGGHYAQAAALALVHNSDLDAYEIAKASMKIAADICVFTNHSTTIEKI 198
>gi|212633357|ref|YP_002309882.1| ATP-dependent protease peptidase subunit [Shewanella piezotolerans
WP3]
gi|226704547|sp|B8CI19|HSLV_SHEPW RecName: Full=ATP-dependent protease subunit HslV
gi|212554841|gb|ACJ27295.1| 20S proteasome, A and B subunits [Shewanella piezotolerans WP3]
Length = 174
Score = 211 bits (536), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L+R++VE+AKDWR DK LR LEA++ +AD +L+ITG GDV++PEN ++
Sbjct: 62 EAKLEMHQGHLMRAAVEMAKDWRSDKVLRKLEALLAVADGEASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A SAA AL+ +T+ SA EIA K+++IA DICV+TN +E LK
Sbjct: 122 AIGSGGNFAQSAATALLENTELSALEIAEKSLTIAGDICVFTNQFKTIEELK 173
>gi|323494456|ref|ZP_08099562.1| ATP-dependent protease subunit HslV [Vibrio brasiliensis LMG 20546]
gi|323311279|gb|EGA64437.1| ATP-dependent protease subunit HslV [Vibrio brasiliensis LMG 20546]
Length = 181
Score = 210 bits (535), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 100/173 (57%), Positives = 137/173 (79%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL E+
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG++A +AA AL+ +T+ A EIA K++ IA DICV+TNH+ +E L++
Sbjct: 122 AIGSGGNFAQAAATALLENTELDAREIAEKSLKIAGDICVFTNHHHTIEELEI 174
>gi|85705742|ref|ZP_01036839.1| ATP-dependent protease peptidase subunit [Roseovarius sp. 217]
gi|85669732|gb|EAQ24596.1| ATP-dependent protease peptidase subunit [Roseovarius sp. 217]
Length = 184
Score = 210 bits (535), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 115/173 (66%), Positives = 137/173 (79%), Gaps = 3/173 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
H TTI+ VR+ G VV+AGDGQVSLGQTV+K ARKVRRL G ++AGFAGS+ADAFTL
Sbjct: 8 HGTTIIGVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHPVVAGFAGSTADAFTL 67
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R+ VELAKDWR DKYL+ LEAM+++ D VITG GDVLEPE
Sbjct: 68 LERLETKLEATPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGDQLYVITGAGDVLEPE 127
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLE 183
+ V AIGSGG++AL+AAR L + +AEEIAR+AM+IAADICVYTN N+ +E
Sbjct: 128 HDVAAIGSGGNFALAAARGLAENPSLTAEEIARRAMAIAADICVYTNGNLTVE 180
>gi|113461677|ref|YP_719746.1| ATP-dependent protease peptidase subunit [Haemophilus somnus 129PT]
gi|170718715|ref|YP_001783905.1| ATP-dependent protease peptidase subunit [Haemophilus somnus 2336]
gi|122945435|sp|Q0I5E1|HSLV_HAES1 RecName: Full=ATP-dependent protease subunit HslV
gi|189028449|sp|B0US06|HSLV_HAES2 RecName: Full=ATP-dependent protease subunit HslV
gi|112823720|gb|ABI25809.1| heat shock protein [Haemophilus somnus 129PT]
gi|168826844|gb|ACA32215.1| 20S proteasome A and B subunits [Haemophilus somnus 2336]
Length = 175
Score = 210 bits (535), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 135/172 (78%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NARKVRRL G ++ GFAG +ADAFTL E
Sbjct: 2 TTIVSVRRKGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLTGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
E+KLE + LL+S+VELAK+WR D+ LR LEAM+++ADKT +L+ITG GDV++P E+ +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKEWRTDRALRRLEAMLIVADKTESLIITGNGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T SA EI K++ IA DICV+TN +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTDLSAREIVEKSLKIAGDICVFTNLTHTIEEL 173
>gi|254490706|ref|ZP_05103891.1| peptidase, T1 family [Methylophaga thiooxidans DMS010]
gi|224464162|gb|EEF80426.1| peptidase, T1 family [Methylophaga thiooxydans DMS010]
Length = 181
Score = 210 bits (535), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+ R++G VVI GDGQVSLG T+MK NARKVRRL G +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTILSYRRNGQVVIGGDGQVSLGNTIMKGNARKVRRLYHGKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L RS++ELAKDWR D+ +R LEA++ +AD+ +L+I+G GDV+EPE
Sbjct: 63 FERFEGKLEKHQGNLTRSALELAKDWRTDRMMRRLEALLAVADEEASLIISGNGDVIEPE 122
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+++IGSGG + +A L +T+ SA EI K ++IAADIC+YTNHN+ +ETL
Sbjct: 123 QGLISIGSGGPFAQAAATALLQNTELSAREIVEKGLNIAADICIYTNHNLTIETL 177
>gi|319791657|ref|YP_004153297.1| 20S proteasome a and b subunits [Variovorax paradoxus EPS]
gi|315594120|gb|ADU35186.1| 20S proteasome A and B subunits [Variovorax paradoxus EPS]
Length = 181
Score = 210 bits (535), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 135/179 (75%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRKDGV----VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTI++VR+ V I GDGQV+LG V+K ARKVRRL G ++AGFAG++AD
Sbjct: 3 QFHGTTIVSVRRKTPQGDQVAIGGDGQVTLGNIVIKGTARKVRRLYHGKVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ L R++VEL KDWR D+ LR LEAM+ +AD T +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGHLTRAAVELTKDWRTDRVLRKLEAMLAVADATTSLIITGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE+GV+AIGSGG+YA SAA+AL+ +T SAE+I RK++ IA +IC+YTN N +E L
Sbjct: 123 LEPEDGVIAIGSGGAYAQSAAKALIENTDLSAEQIVRKSLGIAGEICIYTNMNHTVEAL 181
>gi|15642670|ref|NP_232303.1| ATP-dependent protease peptidase subunit [Vibrio cholerae O1 biovar
El Tor str. N16961]
gi|121590905|ref|ZP_01678227.1| protease HslVU, subunit HslV [Vibrio cholerae 2740-80]
gi|121727582|ref|ZP_01680690.1| protease HslVU, subunit HslV [Vibrio cholerae V52]
gi|147674179|ref|YP_001218164.1| ATP-dependent protease peptidase subunit [Vibrio cholerae O395]
gi|153213965|ref|ZP_01949158.1| protease HslVU, subunit HslV [Vibrio cholerae 1587]
gi|153819928|ref|ZP_01972595.1| protease HslVU, subunit HslV [Vibrio cholerae NCTC 8457]
gi|153824209|ref|ZP_01976876.1| protease HslVU, subunit HslV [Vibrio cholerae B33]
gi|227082791|ref|YP_002811342.1| protease HslVU, subunit HslV [Vibrio cholerae M66-2]
gi|229507277|ref|ZP_04396782.1| ATP-dependent protease HslV [Vibrio cholerae BX 330286]
gi|229509800|ref|ZP_04399281.1| ATP-dependent protease HslV [Vibrio cholerae B33]
gi|229513595|ref|ZP_04403059.1| ATP-dependent protease HslV [Vibrio cholerae TMA 21]
gi|229516924|ref|ZP_04406370.1| ATP-dependent protease HslV [Vibrio cholerae RC9]
gi|229521740|ref|ZP_04411158.1| ATP-dependent protease HslV [Vibrio cholerae TM 11079-80]
gi|229606783|ref|YP_002877431.1| ATP-dependent protease peptidase subunit [Vibrio cholerae MJ-1236]
gi|254851212|ref|ZP_05240562.1| protease HslVU [Vibrio cholerae MO10]
gi|255744364|ref|ZP_05418316.1| ATP-dependent protease HslV [Vibrio cholera CIRS 101]
gi|262158526|ref|ZP_06029641.1| ATP-dependent protease HslV [Vibrio cholerae INDRE 91/1]
gi|297581512|ref|ZP_06943435.1| protease HslVU [Vibrio cholerae RC385]
gi|298500507|ref|ZP_07010311.1| protease HslVU [Vibrio cholerae MAK 757]
gi|11133074|sp|Q9KNQ6|HSLV_VIBCH RecName: Full=ATP-dependent protease subunit HslV
gi|172047533|sp|A5F4X4|HSLV_VIBC3 RecName: Full=ATP-dependent protease subunit HslV
gi|254765621|sp|C3LSA4|HSLV_VIBCM RecName: Full=ATP-dependent protease subunit HslV
gi|9657269|gb|AAF95816.1| protease HslVU, subunit HslV [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121547227|gb|EAX57351.1| protease HslVU, subunit HslV [Vibrio cholerae 2740-80]
gi|121630073|gb|EAX62478.1| protease HslVU, subunit HslV [Vibrio cholerae V52]
gi|124115535|gb|EAY34355.1| protease HslVU, subunit HslV [Vibrio cholerae 1587]
gi|126509526|gb|EAZ72120.1| protease HslVU, subunit HslV [Vibrio cholerae NCTC 8457]
gi|126518267|gb|EAZ75492.1| protease HslVU, subunit HslV [Vibrio cholerae B33]
gi|146316062|gb|ABQ20601.1| protease HslVU, subunit HslV [Vibrio cholerae O395]
gi|227010679|gb|ACP06891.1| protease HslVU, subunit HslV [Vibrio cholerae M66-2]
gi|227014563|gb|ACP10773.1| protease HslVU, subunit HslV [Vibrio cholerae O395]
gi|229341334|gb|EEO06338.1| ATP-dependent protease HslV [Vibrio cholerae TM 11079-80]
gi|229345987|gb|EEO10959.1| ATP-dependent protease HslV [Vibrio cholerae RC9]
gi|229349472|gb|EEO14428.1| ATP-dependent protease HslV [Vibrio cholerae TMA 21]
gi|229353274|gb|EEO18213.1| ATP-dependent protease HslV [Vibrio cholerae B33]
gi|229354782|gb|EEO19703.1| ATP-dependent protease HslV [Vibrio cholerae BX 330286]
gi|229369438|gb|ACQ59861.1| ATP-dependent protease HslV [Vibrio cholerae MJ-1236]
gi|254846917|gb|EET25331.1| protease HslVU [Vibrio cholerae MO10]
gi|255737889|gb|EET93282.1| ATP-dependent protease HslV [Vibrio cholera CIRS 101]
gi|262029687|gb|EEY48336.1| ATP-dependent protease HslV [Vibrio cholerae INDRE 91/1]
gi|297534350|gb|EFH73188.1| protease HslVU [Vibrio cholerae RC385]
gi|297540676|gb|EFH76733.1| protease HslVU [Vibrio cholerae MAK 757]
Length = 185
Score = 210 bits (534), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 137/173 (79%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG+YA +AA AL+ +T+ A IA KA++IA DICV+TNH+ +E L++
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARTIAEKALNIAGDICVFTNHHHTIEELEI 174
>gi|300714744|ref|YP_003739547.1| ATP-dependent protease HslV [Erwinia billingiae Eb661]
gi|299060580|emb|CAX57687.1| ATP-dependent protease HslV [Erwinia billingiae Eb661]
Length = 176
Score = 210 bits (534), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A +I KA+ IA DIC+YTNHN+ +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTEIGARDIVEKALGIAGDICIYTNHNLTIEAL 172
>gi|225851284|ref|YP_002731518.1| ATP-dependent protease peptidase subunit [Persephonella marina
EX-H1]
gi|254802419|sp|C0QS72|HSLV_PERMH RecName: Full=ATP-dependent protease subunit HslV
gi|225645262|gb|ACO03448.1| ATP-dependent protease HslVU, peptidase subunit [Persephonella
marina EX-H1]
Length = 177
Score = 210 bits (534), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ +TTI VR+DG VIAGDGQV+LG +VMKA+ARK+R+L +G I+ GFAGS+AD L
Sbjct: 3 RTKSTTICIVRRDGKTVIAGDGQVTLGNSVMKASARKIRKLYEGKIVVGFAGSAADGLAL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ERLE+KL +Y LLR++VELAKDWR DK+LR LEA+++ ADK I L+I+G GDV+EP+
Sbjct: 63 MERLEEKLNKYRGNLLRAAVELAKDWRTDKFLRRLEAVMVAADKEIMLLISGNGDVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+AIGSGG YA SAA AL +T SA +I +AM IA +IC+YTN NI +E L
Sbjct: 123 EPVLAIGSGGDYARSAALALYRNTDLSARQIVEEAMKIAGEICIYTNSNITIEEL 177
>gi|330720267|gb|EGG98628.1| ATP-dependent protease HslV [gamma proteobacterium IMCC2047]
Length = 176
Score = 210 bits (534), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 136/171 (79%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VRK+G VV+ GDGQVSLG TVMK NARKVRRL + +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRKNGKVVLGGDGQVSLGNTVMKGNARKVRRLYRDQVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L+ LEA++ IA+K +L+I+G GDV+EPE+G++
Sbjct: 62 EAQLEKHQGHLMRAAVELAKDWRTDRSLQRLEALLAIANKDHSLIISGNGDVIEPEHGLI 121
Query: 136 AIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG +A +AA AL+ + SA EI K++ IAA+ICV+TN N +E L
Sbjct: 122 AIGSGGPFAQAAALALIENSDLSAREITEKSLEIAANICVFTNQNRTIEEL 172
>gi|329894772|ref|ZP_08270573.1| ATP-dependent protease HslV [gamma proteobacterium IMCC3088]
gi|328922761|gb|EGG30094.1| ATP-dependent protease HslV [gamma proteobacterium IMCC3088]
Length = 179
Score = 210 bits (534), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 136/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI+ VR+D VVIAGDGQVS+G TVMK NARKVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QFRGTTIVCVRRDNQVVIAGDGQVSMGNTVMKGNARKVRRLYKDQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E +L+++ L+R++V LAK WR ++ LR LEA++ +ADK +LVI+G GDV+EPE
Sbjct: 63 FELFEAQLDKHHGHLVRAAVALAKAWRTERSLRQLEALLAVADKETSLVISGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
N ++AIGSGG +A SAARAL+ +T+ SA ++A KA++IA DIC+YTNH+ +E +
Sbjct: 123 NNLIAIGSGGPFAQSAARALLDNTELSAHDVATKALTIAGDICIYTNHHHTVEII 177
>gi|284037605|ref|YP_003387535.1| 20S proteasome A and subunit betas [Spirosoma linguale DSM 74]
gi|283816898|gb|ADB38736.1| 20S proteasome A and B subunits [Spirosoma linguale DSM 74]
Length = 179
Score = 210 bits (534), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 136/176 (77%), Gaps = 2/176 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+HATT++ +R +G V + DGQ ++G TV K+N RKVR L G ++AGFAGS+ADAFTL
Sbjct: 4 KIHATTVVGIRHNGHVALGADGQATMGNTVAKSNVRKVRVLMGGKVLAGFAGSTADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ER E+KL Y L R+++ELAKDWR D+YLR LEAM+++A K L+++G GDV+EP+
Sbjct: 64 IERFEEKLNAYGGNLKRAAIELAKDWRTDRYLRKLEAMLIVASKDDLLLVSGTGDVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG YA SAA AL +T+ SAEE+ R+++ IAAD+C+YTNHN+V+ETL
Sbjct: 124 ADVAAIGSGGMYAQSAALALKKHATELSAEEMVRESLHIAADVCIYTNHNLVVETL 179
>gi|167625771|ref|YP_001676065.1| ATP-dependent protease peptidase subunit [Shewanella halifaxensis
HAW-EB4]
gi|189036238|sp|B0TVV3|HSLV_SHEHH RecName: Full=ATP-dependent protease subunit HslV
gi|167355793|gb|ABZ78406.1| 20S proteasome A and B subunits [Shewanella halifaxensis HAW-EB4]
Length = 174
Score = 210 bits (534), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 134/172 (77%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L+R++VE+AKDWR DK LR LEA++ +AD +L+ITG GDV++PEN ++
Sbjct: 62 EAKLEMHQGHLMRAAVEMAKDWRSDKVLRKLEALLAVADAESSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A SAA AL+ +T SA EIA K+++IA DICV+TN +E LK
Sbjct: 122 AIGSGGAFAQSAATALLENTDLSALEIAEKSLTIAGDICVFTNQFKTIEELK 173
>gi|254285866|ref|ZP_04960828.1| protease HslVU, subunit HslV [Vibrio cholerae AM-19226]
gi|150424048|gb|EDN15987.1| protease HslVU, subunit HslV [Vibrio cholerae AM-19226]
Length = 185
Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 137/173 (79%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG+YA +AA AL+ +T+ A IA KA++IA DICV+TNH+ +E L++
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARTIAEKALNIAGDICVFTNHHHTIEELEI 174
>gi|326315559|ref|YP_004233231.1| ATP-dependent protease HslVU, peptidase subunit [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323372395|gb|ADX44664.1| ATP-dependent protease HslVU, peptidase subunit [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 182
Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%), Gaps = 6/180 (3%)
Query: 12 KMHATTILTVRK---DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+ H TTIL+VR+ DG V I GDGQV+LG V+K +ARKVR+L G ++AGFAG++A
Sbjct: 3 QFHGTTILSVRRQAADGTIQVAIGGDGQVTLGNIVVKGSARKVRKLHHGKVLAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ER E KL+++ L R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GD
Sbjct: 63 DAFTLFERFEAKLDKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADASASLIITGNGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE G++AIGSGG+YA SAA+AL++ T+ SAE+I RK+++IA ++C+YTN + +ETL
Sbjct: 123 VLEPEQGIVAIGSGGAYAHSAAKALLNHTELSAEDIVRKSLAIAGELCIYTNMHHTVETL 182
>gi|262273449|ref|ZP_06051263.1| ATP-dependent protease HslV [Grimontia hollisae CIP 101886]
gi|262222427|gb|EEY73738.1| ATP-dependent protease HslV [Grimontia hollisae CIP 101886]
Length = 174
Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 137/171 (80%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRALRRLEALLAVADETASLIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A +AA AL+ +T+ A EIA K+++IA DICV+TN + +E L
Sbjct: 122 AIGSGGNFAQAAAIALLENTELDAREIAEKSLTIAGDICVFTNQHHTIEEL 172
>gi|153803695|ref|ZP_01958281.1| protease HslVU, subunit HslV [Vibrio cholerae MZO-3]
gi|124120772|gb|EAY39515.1| protease HslVU, subunit HslV [Vibrio cholerae MZO-3]
Length = 185
Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 136/173 (78%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEQDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG+YA +AA AL+ +T+ A IA KA++IA DICV+TNH+ +E L++
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARTIAEKALNIAGDICVFTNHHHTIEELEI 174
>gi|238764480|ref|ZP_04625428.1| ATP-dependent protease hslV [Yersinia kristensenii ATCC 33638]
gi|238697292|gb|EEP90061.1| ATP-dependent protease hslV [Yersinia kristensenii ATCC 33638]
Length = 182
Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL N+IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYHDNVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +ADKT +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADKTASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|242280397|ref|YP_002992526.1| ATP-dependent protease peptidase subunit [Desulfovibrio salexigens
DSM 2638]
gi|259491385|sp|C6C0P0|HSLV_DESAD RecName: Full=ATP-dependent protease subunit HslV
gi|242123291|gb|ACS80987.1| 20S proteasome A and B subunits [Desulfovibrio salexigens DSM 2638]
Length = 179
Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 137/178 (76%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
++M TTIL V+ D + GDGQV++GQ V MK +A KVR L +IAGFAG++ADAF
Sbjct: 1 MEMRGTTILAVKDDKGTAMIGDGQVTMGQAVVMKHSAVKVRTLYNDQVIAGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER EKKL+ Y L+RS+VE+A DWR DK+LR LEAMI++AD L+I+G GDV+E
Sbjct: 61 TLFERFEKKLKTYSGNLVRSAVEMATDWRTDKFLRKLEAMIMVADAEHILIISGNGDVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P++GV AIGSGGSYALSAARALM +T A +IA+K+M IA++ICVYTN + VL+TL+
Sbjct: 121 PDDGVAAIGSGGSYALSAARALMRNTDMPAADIAQKSMEIASEICVYTNDHFVLKTLE 178
>gi|153825157|ref|ZP_01977824.1| protease HslVU, subunit HslV [Vibrio cholerae MZO-2]
gi|153829486|ref|ZP_01982153.1| protease HslVU, subunit HslV [Vibrio cholerae 623-39]
gi|229524653|ref|ZP_04414058.1| ATP-dependent protease HslV [Vibrio cholerae bv. albensis VL426]
gi|229527400|ref|ZP_04416792.1| ATP-dependent protease HslV [Vibrio cholerae 12129(1)]
gi|148875069|gb|EDL73204.1| protease HslVU, subunit HslV [Vibrio cholerae 623-39]
gi|149741303|gb|EDM55345.1| protease HslVU, subunit HslV [Vibrio cholerae MZO-2]
gi|229335032|gb|EEO00517.1| ATP-dependent protease HslV [Vibrio cholerae 12129(1)]
gi|229338234|gb|EEO03251.1| ATP-dependent protease HslV [Vibrio cholerae bv. albensis VL426]
gi|327485148|gb|AEA79555.1| ATP-dependent protease HslV [Vibrio cholerae LMA3894-4]
Length = 185
Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 137/173 (79%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG+YA +AA AL+ +T+ A IA KA++IA DICV+TNH+ +E L++
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARMIAEKALNIAGDICVFTNHHHTIEELEI 174
>gi|302343316|ref|YP_003807845.1| 20S proteasome A and B subunits [Desulfarculus baarsii DSM 2075]
gi|301639929|gb|ADK85251.1| 20S proteasome A and B subunits [Desulfarculus baarsii DSM 2075]
Length = 180
Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 140/177 (79%), Gaps = 1/177 (0%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ ++ +TT+L ++KDG VV+AGDGQV++GQTV+KA ARKVRRL G ++AGFAG++ADAF
Sbjct: 4 SAEVRSTTVLALKKDGKVVMAGDGQVTMGQTVVKATARKVRRLHNGRVLAGFAGATADAF 63
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ERLE KLE + QL R++VELAKDWR DK LR LEA+++ AD+ L+I+G GDV++
Sbjct: 64 TLFERLEGKLEAHSGQLPRAAVELAKDWRTDKMLRRLEALLIAADREHLLIISGSGDVID 123
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
PE GV AIGSGG YAL+AARALM+ E I R AM +AADIC+YTNH IV+E L
Sbjct: 124 PEEGVAAIGSGGPYALAAARALMAHSPLDPERIVRAAMDVAADICIYTNHQIVVEAL 180
>gi|157373671|ref|YP_001472271.1| ATP-dependent protease peptidase subunit [Shewanella sediminis
HAW-EB3]
gi|189036240|sp|A8FQM0|HSLV_SHESH RecName: Full=ATP-dependent protease subunit HslV
gi|157316045|gb|ABV35143.1| 20S proteasome, A and B subunits [Shewanella sediminis HAW-EB3]
Length = 174
Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L++++VE+AKDWR DK LR LEA++ +AD T +L+ITG GDV++PEN ++
Sbjct: 62 EAKLEMHQGHLMKAAVEMAKDWRSDKMLRKLEALLAVADDTCSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+IGSGG++A SAA AL+ +T+ SA EIA K+++IA DICV+TN +E L
Sbjct: 122 SIGSGGNFAQSAATALLENTELSALEIAEKSLTIAGDICVFTNQFKTIEEL 172
>gi|315186394|gb|EFU20154.1| 20S proteasome A and B subunits [Spirochaeta thermophila DSM 6578]
Length = 178
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 138/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT++ VR++GVV +AGDGQV++G T+MK NARKVR L G ++ GFAG++ADAFTL
Sbjct: 3 EVKSTTVIAVRRNGVVAMAGDGQVTMGTTIMKGNARKVRTLYDGRVLVGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+++ +LRS+V LAKDWR D+ LR LEA++L+AD+ L+++G GDV+EPE
Sbjct: 63 FERFEGKLKEFSGDVLRSAVALAKDWRTDRMLRRLEALLLVADRERMLLLSGTGDVVEPE 122
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+GV+AIGSGG YA +AA+AL+S T SA IA +++ IAA IC+YTN I++E L
Sbjct: 123 DGVLAIGSGGPYAHAAAKALLSHTDLSARRIAEESLRIAASICIYTNEQIIVEEL 177
>gi|260779593|ref|ZP_05888483.1| ATP-dependent protease HslV [Vibrio coralliilyticus ATCC BAA-450]
gi|260604402|gb|EEX30706.1| ATP-dependent protease HslV [Vibrio coralliilyticus ATCC BAA-450]
Length = 181
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL E+
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG++A +AA AL+ +T+ A +IA K++ IA DICV+TNH+ +E L++ E
Sbjct: 122 AIGSGGNFAQAAATALLENTELDARDIAEKSLKIAGDICVFTNHHHTIEELEIPAE 177
>gi|312879577|ref|ZP_07739377.1| 20S proteasome A and B subunits [Aminomonas paucivorans DSM 12260]
gi|310782868|gb|EFQ23266.1| 20S proteasome A and B subunits [Aminomonas paucivorans DSM 12260]
Length = 177
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL VRKDG V +AGDGQV+LG ++KA ARKVRRL +G I+AGFAGS+ADA TLL
Sbjct: 2 FKGTTILCVRKDGRVAMAGDGQVTLGSQIVKAGARKVRRLHEGQILAGFAGSTADAMTLL 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER EK+LE+ LLRS+ L K+WR DK LR LEAM+L+AD+ TL+++G GD+LEPE
Sbjct: 62 ERFEKRLEENQGHLLRSAAALVKEWRTDKALRRLEAMLLVADREQTLLLSGAGDILEPEG 121
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
GV +IGSG YAL+AAR L+ + +A IAR+++ +A++IC+YTN I LE L
Sbjct: 122 GVASIGSGSGYALAAARGLLEGSDWAAGAIARRSLELASEICIYTNDQITLEEL 175
>gi|218885589|ref|YP_002434910.1| ATP-dependent protease peptidase subunit [Desulfovibrio vulgaris
str. 'Miyazaki F']
gi|226704538|sp|B8DKL3|HSLV_DESVM RecName: Full=ATP-dependent protease subunit HslV
gi|218756543|gb|ACL07442.1| 20S proteasome A and B subunits [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 185
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 137/178 (76%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTIL VR V +AGDGQV++GQ+V MK ARKVRRL + ++AGFAG++ADAF
Sbjct: 1 MELKGTTILAVRDADGVAMAGDGQVTMGQSVVMKHTARKVRRLYRDRVLAGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER E KLE++ L R++VELAKDWR DKYLR LEAM+L+AD L++TG GDV+E
Sbjct: 61 TLFERFEAKLEEFGGNLTRAAVELAKDWRKDKYLRRLEAMLLVADAETILILTGTGDVIE 120
Query: 130 PENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P++G+ AIGSGG YALSAARAL T AE + R+AM++A ++CV+TN ++ +ETL+
Sbjct: 121 PDDGIAAIGSGGPYALSAARALSRHTTLDAETVVREAMAVAGELCVFTNGHLTVETLR 178
>gi|206890532|ref|YP_002249197.1| ATP-dependent protease HslV [Thermodesulfovibrio yellowstonii DSM
11347]
gi|238065946|sp|B5YFZ9|HSLV_THEYD RecName: Full=ATP-dependent protease subunit HslV
gi|206742470|gb|ACI21527.1| ATP-dependent protease HslV [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 177
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 134/174 (77%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TT+L V+++ V+IA DGQV++G TV+K NA+K+R+L G ++ GFAGS+ADAFTL
Sbjct: 3 FHGTTVLCVKRNDSVIIASDGQVTMGNTVLKHNAKKIRKLYNGQVLTGFAGSTADAFTLF 62
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KLE Y LLR++VELAKDWR DK LR LEA++++ADK L+I+G GDV+EPE+
Sbjct: 63 ERFEGKLETYKGNLLRAAVELAKDWRTDKILRRLEALLIVADKEHILIISGNGDVIEPED 122
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG +A +AA+AL +T+ A+EIA KAM IA+ IC+YTN+ I+ E L
Sbjct: 123 QVAAIGSGGPFAFAAAKALYDNTELPAKEIAIKAMEIASKICIYTNNIIITEEL 176
>gi|311281624|ref|YP_003943855.1| 20S proteasome A and B subunits [Enterobacter cloacae SCF1]
gi|308750819|gb|ADO50571.1| 20S proteasome A and B subunits [Enterobacter cloacae SCF1]
Length = 176
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ SA +IA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTEMSARDIAVKALDIAGDICIYTNHFHTIEEL 172
>gi|323498088|ref|ZP_08103092.1| ATP-dependent protease subunit HslV [Vibrio sinaloensis DSM 21326]
gi|323316799|gb|EGA69806.1| ATP-dependent protease subunit HslV [Vibrio sinaloensis DSM 21326]
Length = 180
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 137/173 (79%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL E+
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG++A +AA AL+ +T+ A +IA K++ IA DICV+TNH+ +E L++
Sbjct: 122 AIGSGGNFAQAAATALLENTELDARDIAEKSLKIAGDICVFTNHHHTIEELEI 174
>gi|188532280|ref|YP_001906077.1| ATP-dependent protease peptidase subunit [Erwinia tasmaniensis
Et1/99]
gi|238065875|sp|B2VF49|HSLV_ERWT9 RecName: Full=ATP-dependent protease subunit HslV
gi|188027322|emb|CAO95165.1| ATP-dependent protease HslV [Erwinia tasmaniensis Et1/99]
Length = 176
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T A +I KA+ IA DIC+YTNHN+ +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTDIGARDIVEKALGIAGDICIYTNHNLTIEEL 172
>gi|322434045|ref|YP_004216257.1| 20S proteasome A and B subunits [Acidobacterium sp. MP5ACTX9]
gi|321161772|gb|ADW67477.1| 20S proteasome A and B subunits [Acidobacterium sp. MP5ACTX9]
Length = 211
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 138/181 (76%), Gaps = 6/181 (3%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT++ VR+ VV+A DGQVSLG TVMK++A+K+RRL ++AGFAGS+ADAF+L
Sbjct: 29 RIRSTTVICVRRGDSVVMAADGQVSLGGTVMKSSAKKIRRLYNDKVLAGFAGSTADAFSL 88
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
R E KLEQY L R++VELAKDWR DK LR LEA++++AD + TL+++G GDV+EP+
Sbjct: 89 FGRFEAKLEQYAGNLGRAAVELAKDWRTDKMLRQLEALLVVADASQTLMLSGTGDVIEPD 148
Query: 132 -----NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+MAIGSGGSYA +AA ALM +T+ SA EI KAM IAADIC+YTN I +E L
Sbjct: 149 AMRPGEGIMAIGSGGSYAQAAALALMENTEMSAREITEKAMKIAADICIYTNERITVEEL 208
Query: 186 K 186
K
Sbjct: 209 K 209
>gi|292486620|ref|YP_003529490.1| ATP-dependent protease HslV [Erwinia amylovora CFBP1430]
gi|292897855|ref|YP_003537224.1| ATP-dependent protease [Erwinia amylovora ATCC 49946]
gi|291197703|emb|CBJ44798.1| ATP-dependent protease (heat shock protein) [Erwinia amylovora ATCC
49946]
gi|291552037|emb|CBA19074.1| ATP-dependent protease HslV [Erwinia amylovora CFBP1430]
gi|312170683|emb|CBX78946.1| ATP-dependent protease HslV [Erwinia amylovora ATCC BAA-2158]
Length = 176
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T A +I KA+ IA DIC+YTNHN+ +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTDIGARDIVEKALGIAGDICIYTNHNLTIEEL 172
>gi|310828088|ref|YP_003960445.1| 20S proteasome A and B [Eubacterium limosum KIST612]
gi|308739822|gb|ADO37482.1| 20S proteasome A and B [Eubacterium limosum KIST612]
Length = 177
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 137/176 (77%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ VR +G V IAGDGQV++G+T +MKA A+KVR++ ++ GFAGS ADAFTL
Sbjct: 2 FHATTIVGVRHNGEVAIAGDGQVTMGETTIMKATAKKVRKIYNDQVLVGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E K+EQY L R++VELAKDWR DK LR LEA++++ DK TLV++G G+V+EP+
Sbjct: 62 CERFEHKIEQYNGNLQRAAVELAKDWRQDKALRKLEALLIVMDKKETLVLSGSGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ + AIGSGG+YALSAARAL N SA+EIA +++ IA++ICVYTN NI +E L+
Sbjct: 122 DDIAAIGSGGNYALSAARALKRHSNLSAKEIAHESLKIASEICVYTNDNIRVEELE 177
>gi|327441061|dbj|BAK17426.1| ATP-dependent protease HslVU, peptidase subunit [Solibacillus
silvestris StLB046]
Length = 180
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 132/178 (74%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
++HATTI + +G +AGDGQV+LG V MK ARKVRRL G ++AGFAGS ADAFT
Sbjct: 3 QIHATTIFAIHHNGECAMAGDGQVTLGNAVVMKHTARKVRRLFNGKVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KL +Y L R+SVE+AK WR DK LR LEAM+L+ DK+ L+++G G+V+EP
Sbjct: 63 LFEMFEAKLNEYNGNLQRASVEVAKQWRGDKMLRQLEAMLLVMDKSTLLLVSGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YALSA RAL SA+EIA A++ AADICV+TNHNI+LE L
Sbjct: 123 DDGILAIGSGGNYALSAGRALKKHAGDHLSAKEIAEAALTTAADICVFTNHNIILEVL 180
>gi|160896906|ref|YP_001562488.1| ATP-dependent protease peptidase subunit [Delftia acidovorans
SPH-1]
gi|238065853|sp|A9BUJ5|HSLV_DELAS RecName: Full=ATP-dependent protease subunit HslV
gi|160362490|gb|ABX34103.1| 20S proteasome A and B subunits [Delftia acidovorans SPH-1]
Length = 181
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 140/179 (78%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRK---DGV-VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTI++VR+ +GV V I GDGQV+LG V+K ARKVR+L G ++AGFAG++AD
Sbjct: 3 QYHGTTIISVRRQTPEGVQVAIGGDGQVTLGNIVVKGTARKVRKLYHGKVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ L R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADASASLIITGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE G+++IGSGG+YA SAA+AL++ T+ SAEEI RK+++IA ++C+YTN + +ETL
Sbjct: 123 LEPEQGIVSIGSGGAYAHSAAKALLTNTELSAEEIVRKSLAIAGELCIYTNMHHTVETL 181
>gi|254456381|ref|ZP_05069810.1| ATP-dependent protease [Candidatus Pelagibacter sp. HTCC7211]
gi|207083383|gb|EDZ60809.1| ATP-dependent protease [Candidatus Pelagibacter sp. HTCC7211]
Length = 171
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/165 (59%), Positives = 132/165 (80%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRK+ VV+AGDGQVS+G TV+K+ A KVR++ K +++AGFAGS+ADA TL ERL
Sbjct: 2 TTIVLVRKNNEVVVAGDGQVSMGNTVVKSTASKVRKIEKRDVVAGFAGSTADALTLFERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E K+E++ L R++VELAKDWR DKYLR LEA++ I DK + +I+G GDVLEPE V+
Sbjct: 62 EAKIEKHAGNLSRAAVELAKDWRTDKYLRRLEALMAIGDKENSYIISGTGDVLEPEGDVI 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
IGSGG+YAL+A + L+ T SAEE+A+KA+ +A++ICV+TN NI
Sbjct: 122 GIGSGGNYALAAGKVLIETDMSAEEVAKKAIKVASEICVFTNDNI 166
>gi|218898983|ref|YP_002447394.1| ATP-dependent protease hslV [Bacillus cereus G9842]
gi|228902333|ref|ZP_04066490.1| ATP-dependent protease hslV [Bacillus thuringiensis IBL 4222]
gi|228909655|ref|ZP_04073478.1| ATP-dependent protease hslV [Bacillus thuringiensis IBL 200]
gi|228940918|ref|ZP_04103477.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228966775|ref|ZP_04127819.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228973847|ref|ZP_04134423.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980437|ref|ZP_04140747.1| ATP-dependent protease hslV [Bacillus thuringiensis Bt407]
gi|229098299|ref|ZP_04229246.1| ATP-dependent protease hslV [Bacillus cereus Rock3-29]
gi|229104392|ref|ZP_04235061.1| ATP-dependent protease hslV [Bacillus cereus Rock3-28]
gi|229117316|ref|ZP_04246694.1| ATP-dependent protease hslV [Bacillus cereus Rock1-3]
gi|226704534|sp|B7IUI9|HSLV_BACC2 RecName: Full=ATP-dependent protease subunit HslV
gi|218544388|gb|ACK96782.1| ATP-dependent protease hslV [Bacillus cereus G9842]
gi|228666216|gb|EEL21680.1| ATP-dependent protease hslV [Bacillus cereus Rock1-3]
gi|228679090|gb|EEL33298.1| ATP-dependent protease hslV [Bacillus cereus Rock3-28]
gi|228685197|gb|EEL39128.1| ATP-dependent protease hslV [Bacillus cereus Rock3-29]
gi|228779257|gb|EEM27514.1| ATP-dependent protease hslV [Bacillus thuringiensis Bt407]
gi|228785872|gb|EEM33875.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228792874|gb|EEM40432.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228818754|gb|EEM64820.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228849944|gb|EEM94775.1| ATP-dependent protease hslV [Bacillus thuringiensis IBL 200]
gi|228857302|gb|EEN01805.1| ATP-dependent protease hslV [Bacillus thuringiensis IBL 4222]
gi|326941599|gb|AEA17495.1| ATP-dependent protease peptidase subunit [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 180
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 133/177 (75%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRRLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA RAL S +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 180
>gi|84390846|ref|ZP_00991538.1| ATP-dependent protease peptidase subunit [Vibrio splendidus 12B01]
gi|86147300|ref|ZP_01065614.1| ATP-dependent protease peptidase subunit [Vibrio sp. MED222]
gi|218710818|ref|YP_002418439.1| ATP-dependent protease peptidase subunit [Vibrio splendidus LGP32]
gi|254765622|sp|B7VLM6|HSLV_VIBSL RecName: Full=ATP-dependent protease subunit HslV
gi|84376649|gb|EAP93526.1| ATP-dependent protease peptidase subunit [Vibrio splendidus 12B01]
gi|85834865|gb|EAQ53009.1| ATP-dependent protease peptidase subunit [Vibrio sp. MED222]
gi|218323837|emb|CAV20198.1| ATP-dependent protease hslV [Vibrio splendidus LGP32]
Length = 182
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL E+
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A +AA AL+ +T A EIA K+++IA DICV+TNH+ +E L+
Sbjct: 122 AIGSGGNFAQAAATALLENTDLDAREIAEKSLNIAGDICVFTNHHHTIEELE 173
>gi|312898771|ref|ZP_07758160.1| ATP-dependent protease HslVU, peptidase subunit [Megasphaera
micronuciformis F0359]
gi|310620202|gb|EFQ03773.1| ATP-dependent protease HslVU, peptidase subunit [Megasphaera
micronuciformis F0359]
Length = 179
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 135/175 (77%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V KDG IAGDGQV++G +V MK A+KVRRL G +++GFAGS ADAF+L
Sbjct: 5 FHATTIVAVSKDGKTAIAGDGQVTMGNSVIMKGTAQKVRRLYNGKVVSGFAGSVADAFSL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+R E KL +Y L+RS+VELAKDWR DK L LEA++L++D L+++G G+V+EP+
Sbjct: 65 FDRFEAKLNEYNGNLIRSAVELAKDWRSDKVLHKLEALLLVSDGERILMLSGTGEVIEPD 124
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG YAL+AARAL +T +A+EIA K++ IAADICVYTNHN++ E +
Sbjct: 125 DGISAIGSGGMYALAAARALKDNTDLTAKEIAEKSLHIAADICVYTNHNVICEEI 179
>gi|157963593|ref|YP_001503627.1| ATP-dependent protease peptidase subunit [Shewanella pealeana ATCC
700345]
gi|189036239|sp|A8H955|HSLV_SHEPA RecName: Full=ATP-dependent protease subunit HslV
gi|157848593|gb|ABV89092.1| 20S proteasome A and B subunits [Shewanella pealeana ATCC 700345]
Length = 174
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAGS+ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGSTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L+R++VE+AKDWR DK LR LEA++ +AD +L+ITG GDV++PEN ++
Sbjct: 62 EAKLEMHQGHLMRAAVEMAKDWRSDKVLRKLEALLAVADAESSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A SAA AL+ +T SA EIA K+++IA +ICV+TN +E LK
Sbjct: 122 AIGSGGAFAQSAATALLENTDLSALEIAEKSLTIAGNICVFTNQFKTIEELK 173
>gi|149189184|ref|ZP_01867471.1| ATP-dependent protease peptidase subunit [Vibrio shilonii AK1]
gi|148836938|gb|EDL53888.1| ATP-dependent protease peptidase subunit [Vibrio shilonii AK1]
Length = 177
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 134/172 (77%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A +AA AL+ +T A EIA K++ IA DICV+TNH +E L+
Sbjct: 122 AIGSGGNFAQAAATALLENTDLDAREIAEKSLKIAGDICVFTNHYHTVEELE 173
>gi|71279586|ref|YP_271018.1| ATP-dependent protease peptidase subunit [Colwellia psychrerythraea
34H]
gi|71145326|gb|AAZ25799.1| ATP-dependent protease HslVU, HslV subunit [Colwellia
psychrerythraea 34H]
Length = 172
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G V I GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVAIGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLEQ+ L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ESKLEQHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVIQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T SA+EI K+++IA +ICV+TN ++ L
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAKEIVEKSLTIAGNICVFTNQEQTIDEL 172
>gi|163750992|ref|ZP_02158224.1| ATP-dependent protease peptidase subunit [Shewanella benthica KT99]
gi|161329282|gb|EDQ00280.1| ATP-dependent protease peptidase subunit [Shewanella benthica KT99]
Length = 174
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L++++VE+AKDWR DK LR LEA++ +AD +L+ITG GDV++PEN ++
Sbjct: 62 EAKLEMHQGHLMKAAVEMAKDWRSDKMLRKLEALLAVADSECSLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG +A SAA AL+ +T+ +A EIA+K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGPFAQSAATALLENTELTATEIAQKSLTIAGDICVFTNQFKTIEEL 172
>gi|119896714|ref|YP_931927.1| ATP-dependent protease peptidase subunit [Azoarcus sp. BH72]
gi|166221622|sp|A1K2I5|HSLV_AZOSB RecName: Full=ATP-dependent protease subunit HslV
gi|119669127|emb|CAL93040.1| ATP-dependent protease HslV [Azoarcus sp. BH72]
Length = 178
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG V+KA+ARKVR L +G I+AGFAG +ADAFTL
Sbjct: 3 QYHGTTILSVRRGNSVALGGDGQVTLGNIVVKASARKVRTLYQGQILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+++ LLRS+VELAKDWR D+ LR LEAM+ +AD+ +L+ITG GDVLEPE
Sbjct: 63 FERFEAKLDKHQGNLLRSAVELAKDWRTDRMLRRLEAMLAVADREHSLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG+YA SAARAL+ +T+ S ++ K+++IA D+C+YTN +E L
Sbjct: 123 QGIVAIGSGGAYAQSAARALIENTELSPRDVIAKSLAIAGDLCIYTNQCHTIEVL 177
>gi|163859117|ref|YP_001633415.1| ATP-dependent protease peptidase subunit [Bordetella petrii DSM
12804]
gi|229486309|sp|A9IH51|HSLV_BORPD RecName: Full=ATP-dependent protease subunit HslV
gi|163262845|emb|CAP45148.1| ATP-dependent protease heat shock protein [Bordetella petrii]
Length = 179
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K ARK+RRL I+AGFAG++ADAFTL
Sbjct: 3 QFHATTIVCVRRGNKVALGGDGQVTLGNIVIKGTARKIRRLYHDKILAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+++AD TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGHLMRAAVELTRDWRTDRVLRRLEAMLIVADAEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA AL+ +T+ S ++I ++++ IA DIC+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELSPQDIVKQSLEIAGDICIYTNQNHVIETL 177
>gi|300870912|ref|YP_003785783.1| ATP-dependent protease peptidase subunit [Brachyspira pilosicoli
95/1000]
gi|300688611|gb|ADK31282.1| ATP-dependent protease peptidase subunit [Brachyspira pilosicoli
95/1000]
Length = 176
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI V +DGV IAGDGQV+LG+TVMK NA K+R+L G +I+GFAGS+ADAFTL
Sbjct: 2 FKGTTICAVCRDGVTAIAGDGQVTLGETVMKPNAVKLRKLYGGKVISGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ EKKL+++ L R++VELA++WR DK LRNL+A+I++A K L+++G GDV+E EN
Sbjct: 62 EKFEKKLQEFSGDLTRAAVELAREWRTDKMLRNLQALIIVASKEKMLLLSGNGDVIESEN 121
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
++AIGSGG YA +AA AL N SA+EIARK++ IA+ IC+YTN NI LE ++
Sbjct: 122 NILAIGSGGQYAKAAAMALSENTNLSAKEIARKSLEIASQICIYTNSNISLEVIE 176
>gi|315125399|ref|YP_004067402.1| ATP-dependent protease peptidase subunit [Pseudoalteromonas sp.
SM9913]
gi|315013912|gb|ADT67250.1| ATP-dependent protease peptidase subunit [Pseudoalteromonas sp.
SM9913]
Length = 172
Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+D VVI GDGQVSLG TVMK NARKVRRL G +IAGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRDDKVVIGGDGQVSLGNTVMKGNARKVRRLYNGKVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L +++VE+AKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLEMHQGNLTKAAVEMAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T SA EI K+++IA +ICV+TN+ +E L
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAREIVEKSLTIAGNICVFTNNFQTIEEL 172
>gi|229587960|ref|YP_002870079.1| ATP-dependent protease peptidase subunit [Pseudomonas fluorescens
SBW25]
gi|312958528|ref|ZP_07773048.1| ATP-dependent protease [Pseudomonas fluorescens WH6]
gi|259491395|sp|C3KAH1|HSLV_PSEFS RecName: Full=ATP-dependent protease subunit HslV
gi|229359826|emb|CAY46676.1| ATP-dependent protease [Pseudomonas fluorescens SBW25]
gi|311287071|gb|EFQ65632.1| ATP-dependent protease [Pseudomonas fluorescens WH6]
Length = 176
Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 132/169 (78%), Gaps = 1/169 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLE 183
A+GSGG YA +AA AL+ T SA EI A+ IA DICV+TNHN +E
Sbjct: 122 AMGSGGGYAQAAASALLKKTDLSAREIVETALGIAGDICVFTNHNQTIE 170
>gi|229019025|ref|ZP_04175866.1| ATP-dependent protease hslV [Bacillus cereus AH1273]
gi|229025271|ref|ZP_04181691.1| ATP-dependent protease hslV [Bacillus cereus AH1272]
gi|228736024|gb|EEL86599.1| ATP-dependent protease hslV [Bacillus cereus AH1272]
gi|228742265|gb|EEL92424.1| ATP-dependent protease hslV [Bacillus cereus AH1273]
Length = 180
Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 133/177 (75%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G V MK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA RAL S +A+EIA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQYASEHLTAKEIAKASLDIAGDICVYTNHNIIVEEL 180
>gi|323701842|ref|ZP_08113512.1| 20S proteasome, A and B subunits [Desulfotomaculum nigrificans DSM
574]
gi|323533146|gb|EGB23015.1| 20S proteasome, A and B subunits [Desulfotomaculum nigrificans DSM
574]
Length = 176
Score = 208 bits (530), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 140/175 (80%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V++ V +AGDGQV+ GQ T+MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 2 FHATTIVAVKRGNKVAVAGDGQVTFGQNTIMKHTARKVRRLHQGQVLAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE++ L+R++VELAKDWR DKYLR LEAM+++A+K LV++G G+V+EP+
Sbjct: 62 FEKFEGKLEEFHGNLMRAAVELAKDWRTDKYLRALEAMLIVANKENLLVLSGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV AIGSGG YAL+AARAL+ T+ S E+AR+A+ +AADICVYTNHNIV+E +
Sbjct: 122 EGVTAIGSGGPYALAAARALLKHTEMSPAEVAREALGLAADICVYTNHNIVVEEI 176
>gi|329298185|ref|ZP_08255521.1| ATP-dependent protease subunit HslV [Plautia stali symbiont]
Length = 176
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAGS+ADAFTL E
Sbjct: 2 TTIVSVRRNGRVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGSTADAFTLYELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+I+G GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENSSLIISGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A +I KA++IA DIC+YTNHNI E L
Sbjct: 122 AIGSGGPYAQAAARALLENTEMGAHDIVAKALNIAGDICIYTNHNINYEEL 172
>gi|332142913|ref|YP_004428651.1| ATP-dependent protease subunit HslV [Alteromonas macleodii str.
'Deep ecotype']
gi|332143042|ref|YP_004428780.1| ATP-dependent protease subunit HslV [Alteromonas macleodii str.
'Deep ecotype']
gi|327552935|gb|AEA99653.1| ATP-dependent protease subunit HslV [Alteromonas macleodii str.
'Deep ecotype']
gi|327553064|gb|AEA99782.1| ATP-dependent protease subunit HslV [Alteromonas macleodii str.
'Deep ecotype']
Length = 174
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VV+AGDGQVSLG TVMK NARKVRRL I+AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGNQVVMAGDGQVSLGNTVMKGNARKVRRLYHDKILAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L +++VELAKDWR D+ LR LEA++ +AD+T + +ITG GDV++PE ++
Sbjct: 62 EAKLEAHQGHLTKAAVELAKDWRTDRALRKLEALLAVADETASFIITGNGDVVQPEQDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ +T+ SA++IA KA++IA DICV+TNH+ ++ L
Sbjct: 122 AIGSGGNYAQAAATALLDNTELSAKDIAEKALTIAGDICVFTNHSQTVDVL 172
>gi|322382309|ref|ZP_08056216.1| ATP-dependent protease peptidase subunit-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321153662|gb|EFX46037.1| ATP-dependent protease peptidase subunit-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 183
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 138/178 (77%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ HATTI +R+DG IAGDGQV+ G+ +MK A+KVRRL +G +IAGFAGS ADA
Sbjct: 6 MSFHATTIFAMRRDGEGAIAGDGQVTFGENMIMKQTAKKVRRLYRGKVIAGFAGSVADAI 65
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE++ L R++VELAKDWR D+ LR LEAM+++ D + L+I+G G+++E
Sbjct: 66 TLFEKFEGKLEEHHGNLQRAAVELAKDWRSDRVLRKLEAMLIVMDTSGLLLISGNGEIIE 125
Query: 130 PENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGGS+ALSA RAL + Q SA++IA+ ++ +AADICVYTNHNI++E L
Sbjct: 126 PDDGIIAIGSGGSFALSAGRALAKYAPQMSAKDIAKASLEMAADICVYTNHNIIVEEL 183
>gi|127511309|ref|YP_001092506.1| ATP-dependent protease peptidase subunit [Shewanella loihica PV-4]
gi|166223000|sp|A3Q9U9|HSLV_SHELP RecName: Full=ATP-dependent protease subunit HslV
gi|126636604|gb|ABO22247.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella loihica PV-4]
Length = 174
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L+R++VE+AKDWR D+ LR LEA++ +AD +L+ITG GDV++PEN ++
Sbjct: 62 ESKLEMHQGHLMRAAVEMAKDWRSDRVLRKLEALLAVADTECSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A +AA AL+ +T SA+EIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNFAQAAATALLENTDLSAKEIAEKSLTIAGDICVFTNQFKTIEEL 172
>gi|238794364|ref|ZP_04637975.1| ATP-dependent protease hslV [Yersinia intermedia ATCC 29909]
gi|238726265|gb|EEQ17808.1| ATP-dependent protease hslV [Yersinia intermedia ATCC 29909]
Length = 176
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ SA++I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLDNTELSAKDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|317050063|ref|YP_004117711.1| 20S proteasome subunits A/B [Pantoea sp. At-9b]
gi|316951680|gb|ADU71155.1| 20S proteasome A and B subunits [Pantoea sp. At-9b]
Length = 195
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 135/174 (77%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL
Sbjct: 18 LPVTTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLF 77
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E E+KLE + L++++VELAKDWR D+ LR LEA++ +AD++ +L+I+G GDV++PEN
Sbjct: 78 ELFERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADESASLIISGNGDVIQPEN 137
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++AIGSGG YA +AARAL+ +T+ A++I KA+ IA DIC+YTNHN+ E L
Sbjct: 138 DLIAIGSGGPYAQAAARALLENTELGAKDIVAKALDIAGDICIYTNHNVNFEEL 191
>gi|37528577|ref|NP_931922.1| ATP-dependent protease peptidase subunit [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|47605635|sp|Q7MYC2|HSLV_PHOLL RecName: Full=ATP-dependent protease subunit HslV
gi|36788015|emb|CAE17134.1| ATP-dependent protease HslV (heat shock protein) [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 176
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADENTSLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG +A SAARA++ +T A +IA KA++IA DIC+YTNHN E L
Sbjct: 122 AIGSGGPFAQSAARAMLENTDLGARQIAEKALTIAGDICIYTNHNHNFEEL 172
>gi|121595972|ref|YP_987868.1| ATP-dependent protease peptidase subunit [Acidovorax sp. JS42]
gi|120608052|gb|ABM43792.1| HslV component of HslUV peptidase [Acidovorax sp. JS42]
Length = 193
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 138/179 (77%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRK---DGV-VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTIL+VR+ DG+ V + GDGQV+LG V+K ARKVR+L +G ++AGFAG++AD
Sbjct: 15 QYHGTTILSVRRQTADGIQVALGGDGQVTLGNIVVKGTARKVRKLYQGRVLAGFAGATAD 74
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ QL R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GDV
Sbjct: 75 AFTLFERFEAKLEKHQGQLTRAAIELTKDWRTDRVLRRLEAMLAVADHSASLIITGNGDV 134
Query: 128 LEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE G++AIGSGG+YA SAA+AL+S T A EI +K++ IA ++C+YTN + +ETL
Sbjct: 135 LEPEQGIIAIGSGGAYAHSAAKALLSNTDLPAAEIVKKSLEIAGELCIYTNMHHTIETL 193
>gi|237807245|ref|YP_002891685.1| ATP-dependent protease peptidase subunit [Tolumonas auensis DSM
9187]
gi|259491399|sp|C4L9X0|HSLV_TOLAT RecName: Full=ATP-dependent protease subunit HslV
gi|237499506|gb|ACQ92099.1| 20S proteasome A and B subunits [Tolumonas auensis DSM 9187]
Length = 180
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQVSLG TVMK NARKV RL G ++AGFAG +ADAFTLLER
Sbjct: 2 TTIVSVRRNGQVVIGGDGQVSLGNTVMKGNARKVHRLYNGKVLAGFAGGTADAFTLLERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L R++V LAK+WR D+ LR LEA++ +AD + +ITG GDV++PEN ++
Sbjct: 62 EAKLQAHQGNLERAAVALAKEWRTDRALRRLEALLAVADAQRSFIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A SAARAL+ +T+ SAEEI +KA++IA DICV+TN +E L+
Sbjct: 122 AIGSGGAFAQSAARALLENTELSAEEIVKKALTIAGDICVFTNSFHTIEVLE 173
>gi|319945235|ref|ZP_08019497.1| ATP-dependent protease HslV [Lautropia mirabilis ATCC 51599]
gi|319741805|gb|EFV94230.1| ATP-dependent protease HslV [Lautropia mirabilis ATCC 51599]
Length = 172
Score = 208 bits (529), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ V + GDGQV+LG V+K ARKVRRLG ++AGFAG +ADAFTL +R
Sbjct: 2 TTIVSVRRGDSVALGGDGQVTLGNIVVKGTARKVRRLGGNKVLAGFAGGTADAFTLFDRF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE+YP L++++VELAK+WR D+ LR LEAM+ +ADK +L+ITG GDVLEPE+G++
Sbjct: 62 EAQLERYPANLMKAAVELAKEWRTDRVLRRLEAMLAVADKQHSLIITGNGDVLEPEHGLV 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA SAA AL+ +T+ S EI +K++ IA D+C+YTN N +ETL
Sbjct: 122 AIGSGGAYAQSAALALLENTELSPTEIVQKSLKIAGDLCIYTNQNHTIETL 172
>gi|328865749|gb|EGG14135.1| Heat shock protein HslV [Dictyostelium fasciculatum]
Length = 271
Score = 208 bits (529), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 140/179 (78%), Gaps = 1/179 (0%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H ++ ATTIL+VR+ G VVI GDGQV+ G +++K NA+K+R+L +G I+AGFAGS AD
Sbjct: 48 HDPMRKKATTILSVRRGGKVVIIGDGQVTQGHSIVKPNAKKIRKLHEGTIVAGFAGSVAD 107
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL + LEKKL ++ L +S VELA+ WR DKY R LEA I++ADK ITL I G GDV
Sbjct: 108 AFTLFDLLEKKLTEHRGLLTKSCVELAQQWRTDKYYRKLEASIIVADKDITLNIDGNGDV 167
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
LEP +GV AIGSGG +AL+AARAL++ SAEEIA+++M IAADIC+YTNHN ++ET+
Sbjct: 168 LEPNDGVSAIGSGGEFALAAARALLTVPELSAEEIAQRSMKIAADICIYTNHNFIMETI 226
>gi|170728750|ref|YP_001762776.1| ATP-dependent protease peptidase subunit [Shewanella woodyi ATCC
51908]
gi|238065941|sp|B1KK50|HSLV_SHEWM RecName: Full=ATP-dependent protease subunit HslV
gi|169814097|gb|ACA88681.1| 20S proteasome A and B subunits [Shewanella woodyi ATCC 51908]
Length = 174
Score = 208 bits (529), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L++++VE+AKDWR DK LR LEA++ +AD T +L+ITG GDV++PEN ++
Sbjct: 62 EAKLEMHQGHLMKAAVEMAKDWRSDKMLRKLEALLAVADDTCSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T+ +A EIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNFAQSAATALLENTELTALEIAEKSLTIAGDICVFTNQFKTIEEL 172
>gi|323441031|gb|EGA98738.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
O11]
gi|323443900|gb|EGB01511.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
O46]
Length = 181
Score = 208 bits (529), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 138/176 (78%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 6 LHATTIYAVRHNGKAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 66 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPD 125
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL ++ SAEE+A +++ +AADICV+TN+NIV+ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKRHASHLSAEEMAYESLKVAADICVFTNNNIVVETL 181
>gi|149201421|ref|ZP_01878396.1| ATP-dependent protease peptidase subunit [Roseovarius sp. TM1035]
gi|149145754|gb|EDM33780.1| ATP-dependent protease peptidase subunit [Roseovarius sp. TM1035]
Length = 184
Score = 207 bits (528), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 137/175 (78%), Gaps = 3/175 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
H TTI+ VR+ G VV+AGDGQVSLGQTV+K ARKVRRL G ++AGFAGS+ADAFTL
Sbjct: 8 HGTTIIGVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHPVVAGFAGSTADAFTL 67
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLE P QL R+ VELAKDWR DKYL+ LEAM+++ D VITG GDVLEPE
Sbjct: 68 LERLETKLEATPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGDQLYVITGAGDVLEPE 127
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG++AL+AAR L + SAE+IAR+AM+IAADICVYTN + +E +
Sbjct: 128 HDVAAIGSGGNFALAAARGLAENPDLSAEDIARRAMAIAADICVYTNGKLTVERI 182
>gi|238760314|ref|ZP_04621456.1| ATP-dependent protease hslV [Yersinia aldovae ATCC 35236]
gi|238701442|gb|EEP94017.1| ATP-dependent protease hslV [Yersinia aldovae ATCC 35236]
Length = 176
Score = 207 bits (528), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NARKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNARKVRRLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVIQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T A++I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTDLGAKDIVEKSLSIAGDICIYTNRTQTIEEL 172
>gi|222097275|ref|YP_002531332.1| ATP-dependent protease peptidase subunit [Bacillus cereus Q1]
gi|254802332|sp|B9IVB9|HSLV_BACCQ RecName: Full=ATP-dependent protease subunit HslV
gi|221241333|gb|ACM14043.1| ATP-dependent protease hslV [Bacillus cereus Q1]
Length = 180
Score = 207 bits (528), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 134/177 (75%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G V MK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA RAL S +A++IA+ +++IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLNIAGDICVYTNHNIIVEEL 180
>gi|222112160|ref|YP_002554424.1| ATP-dependent protease peptidase subunit [Acidovorax ebreus TPSY]
gi|254802411|sp|B9MFS3|HSLV_ACIET RecName: Full=ATP-dependent protease subunit HslV
gi|221731604|gb|ACM34424.1| 20S proteasome A and B subunits [Acidovorax ebreus TPSY]
Length = 181
Score = 207 bits (528), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 138/179 (77%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRK---DGV-VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTIL+VR+ DG+ V + GDGQV+LG V+K ARKVR+L +G ++AGFAG++AD
Sbjct: 3 QYHGTTILSVRRQTADGIQVALGGDGQVTLGNIVVKGTARKVRKLYQGRVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ QL R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGQLTRAAIELTKDWRTDRVLRRLEAMLAVADHSASLIITGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE G++AIGSGG+YA SAA+AL+S T A EI +K++ IA ++C+YTN + +ETL
Sbjct: 123 LEPEQGIVAIGSGGAYAHSAAKALLSNTDLPAAEIVKKSLEIAGELCIYTNMHHTIETL 181
>gi|225874218|ref|YP_002755677.1| ATP-dependent protease HslV [Acidobacterium capsulatum ATCC 51196]
gi|225793905|gb|ACO33995.1| ATP-dependent protease HslV [Acidobacterium capsulatum ATCC 51196]
Length = 204
Score = 207 bits (528), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 136/178 (76%), Gaps = 1/178 (0%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
A ++ +TT++ VR+ VV+A DGQV++G V+K +ARKVRRL + ++AGFAGS+ADAF
Sbjct: 26 APRIRSTTVICVRRGNSVVMAADGQVTMGDAVIKQSARKVRRLYQDKVLAGFAGSTADAF 85
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+L R E KLEQ+ L R++VELAKDWR DK LRNLEA++++AD +I G GDV+E
Sbjct: 86 SLFGRFEGKLEQHAGNLGRAAVELAKDWRTDKMLRNLEALLIVADPHQMFLIGGAGDVIE 145
Query: 130 PENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P+ GV AIGSGGSYA++AARAL+ +T SA EIA KA+ IA DIC+YTN +I LE L+
Sbjct: 146 PDEGVTAIGSGGSYAMAAARALLENTDLSAREIAEKALRIAGDICIYTNGHITLEELQ 203
>gi|22124213|ref|NP_667636.1| ATP-dependent protease peptidase subunit [Yersinia pestis KIM 10]
gi|45439971|ref|NP_991510.1| ATP-dependent protease peptidase subunit [Yersinia pestis biovar
Microtus str. 91001]
gi|51594456|ref|YP_068647.1| ATP-dependent protease peptidase subunit [Yersinia
pseudotuberculosis IP 32953]
gi|108806254|ref|YP_650170.1| ATP-dependent protease peptidase subunit [Yersinia pestis Antiqua]
gi|108813907|ref|YP_649674.1| ATP-dependent protease peptidase subunit [Yersinia pestis Nepal516]
gi|145601042|ref|YP_001165118.1| ATP-dependent protease peptidase subunit [Yersinia pestis Pestoides
F]
gi|150260793|ref|ZP_01917521.1| heat shock protein [Yersinia pestis CA88-4125]
gi|153950787|ref|YP_001399113.1| ATP-dependent protease peptidase subunit [Yersinia
pseudotuberculosis IP 31758]
gi|162418923|ref|YP_001604749.1| ATP-dependent protease peptidase subunit [Yersinia pestis Angola]
gi|165928393|ref|ZP_02224225.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165936313|ref|ZP_02224882.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011508|ref|ZP_02232406.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213703|ref|ZP_02239738.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167402505|ref|ZP_02307959.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419142|ref|ZP_02310895.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425892|ref|ZP_02317645.1| ATP-dependent protease HslV [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167469786|ref|ZP_02334490.1| ATP-dependent protease HslV [Yersinia pestis FV-1]
gi|170026310|ref|YP_001722815.1| ATP-dependent protease peptidase subunit [Yersinia
pseudotuberculosis YPIII]
gi|186893444|ref|YP_001870556.1| ATP-dependent protease peptidase subunit [Yersinia
pseudotuberculosis PB1/+]
gi|218927321|ref|YP_002345196.1| ATP-dependent protease peptidase subunit [Yersinia pestis CO92]
gi|229836220|ref|ZP_04456388.1| peptidase component of the HslUV protease [Yersinia pestis
Pestoides A]
gi|229839959|ref|ZP_04460118.1| peptidase component of the HslUV protease [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842041|ref|ZP_04462196.1| peptidase component of the HslUV protease [Yersinia pestis biovar
Orientalis str. India 195]
gi|229904433|ref|ZP_04519544.1| peptidase component of the HslUV protease [Yersinia pestis
Nepal516]
gi|270488705|ref|ZP_06205779.1| ATP-dependent protease HslVU, peptidase subunit [Yersinia pestis
KIM D27]
gi|294502202|ref|YP_003566264.1| ATP-dependent protease peptidase subunit [Yersinia pestis Z176003]
gi|21759179|sp|Q8ZJJ4|HSLV_YERPE RecName: Full=ATP-dependent protease subunit HslV
gi|85542208|sp|Q66G84|HSLV_YERPS RecName: Full=ATP-dependent protease subunit HslV
gi|122979804|sp|Q1CBE7|HSLV_YERPA RecName: Full=ATP-dependent protease subunit HslV
gi|122979888|sp|Q1CD56|HSLV_YERPN RecName: Full=ATP-dependent protease subunit HslV
gi|166223007|sp|A4TS83|HSLV_YERPP RecName: Full=ATP-dependent protease subunit HslV
gi|166918424|sp|A7FCY5|HSLV_YERP3 RecName: Full=ATP-dependent protease subunit HslV
gi|238065952|sp|B2JZC6|HSLV_YERPB RecName: Full=ATP-dependent protease subunit HslV
gi|238065953|sp|B1JQ75|HSLV_YERPY RecName: Full=ATP-dependent protease subunit HslV
gi|238687320|sp|A9R6C8|HSLV_YERPG RecName: Full=ATP-dependent protease subunit HslV
gi|21956974|gb|AAM83887.1|AE013628_10 heat shock protein, proteasome-related peptidase subunit [Yersinia
pestis KIM 10]
gi|45434826|gb|AAS60387.1| heat shock protein [Yersinia pestis biovar Microtus str. 91001]
gi|51587738|emb|CAH19338.1| heat shock protein [Yersinia pseudotuberculosis IP 32953]
gi|108777555|gb|ABG20074.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Yersinia pestis Nepal516]
gi|108778167|gb|ABG12225.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Yersinia pestis Antiqua]
gi|115345932|emb|CAL18794.1| heat shock protein [Yersinia pestis CO92]
gi|145212738|gb|ABP42145.1| heat shock protein [Yersinia pestis Pestoides F]
gi|149290201|gb|EDM40278.1| heat shock protein [Yersinia pestis CA88-4125]
gi|152962282|gb|ABS49743.1| ATP-dependent protease HslV [Yersinia pseudotuberculosis IP 31758]
gi|162351738|gb|ABX85686.1| ATP-dependent protease HslV [Yersinia pestis Angola]
gi|165915927|gb|EDR34535.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
IP275]
gi|165919575|gb|EDR36908.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989654|gb|EDR41955.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205105|gb|EDR49585.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166963136|gb|EDR59157.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048121|gb|EDR59529.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167055040|gb|EDR64839.1| ATP-dependent protease HslV [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169752844|gb|ACA70362.1| 20S proteasome A and B subunits [Yersinia pseudotuberculosis YPIII]
gi|186696470|gb|ACC87099.1| 20S proteasome A and B subunits [Yersinia pseudotuberculosis PB1/+]
gi|229678551|gb|EEO74656.1| peptidase component of the HslUV protease [Yersinia pestis
Nepal516]
gi|229690351|gb|EEO82405.1| peptidase component of the HslUV protease [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696325|gb|EEO86372.1| peptidase component of the HslUV protease [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706668|gb|EEO92674.1| peptidase component of the HslUV protease [Yersinia pestis
Pestoides A]
gi|262360281|gb|ACY57002.1| ATP-dependent protease peptidase subunit [Yersinia pestis D106004]
gi|262364228|gb|ACY60785.1| ATP-dependent protease peptidase subunit [Yersinia pestis D182038]
gi|270337209|gb|EFA47986.1| ATP-dependent protease HslVU, peptidase subunit [Yersinia pestis
KIM D27]
gi|294352661|gb|ADE63002.1| ATP-dependent protease peptidase subunit [Yersinia pestis Z176003]
gi|320013459|gb|ADV97030.1| peptidase component of the HslUV protease [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 174
Score = 207 bits (528), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+DG VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRDGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|82750854|ref|YP_416595.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
RF122]
gi|123549065|sp|Q2YXL5|HSLV_STAAB RecName: Full=ATP-dependent protease subunit HslV
gi|82656385|emb|CAI80804.1| ATP-dependent protease heat shock protein [Staphylococcus aureus
RF122]
Length = 181
Score = 207 bits (527), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 137/176 (77%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 6 LHATTIYAVRHNGKAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 66 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPD 125
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL ++ SAEE+A +++ +AADICV+TN NIV+ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKHHASHLSAEEMAYESLKVAADICVFTNDNIVVETL 181
>gi|30021918|ref|NP_833549.1| ATP-dependent protease peptidase subunit [Bacillus cereus ATCC
14579]
gi|30263834|ref|NP_846211.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
Ames]
gi|47529258|ref|YP_020607.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
'Ames Ancestor']
gi|49186680|ref|YP_029932.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
Sterne]
gi|49479415|ref|YP_037891.1| ATP-dependent protease peptidase subunit [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|52141659|ref|YP_085171.1| ATP-dependent protease peptidase subunit [Bacillus cereus E33L]
gi|65321157|ref|ZP_00394116.1| COG5405: ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Bacillus anthracis str. A2012]
gi|118479052|ref|YP_896203.1| ATP-dependent protease peptidase subunit [Bacillus thuringiensis
str. Al Hakam]
gi|165873315|ref|ZP_02217920.1| ATP-dependent protease hslV [Bacillus anthracis str. A0488]
gi|167642026|ref|ZP_02400256.1| ATP-dependent protease hslV [Bacillus anthracis str. A0193]
gi|170689660|ref|ZP_02880840.1| ATP-dependent protease hslV [Bacillus anthracis str. A0465]
gi|170709360|ref|ZP_02899774.1| ATP-dependent protease hslV [Bacillus anthracis str. A0389]
gi|177655994|ref|ZP_02937121.1| ATP-dependent protease hslV [Bacillus anthracis str. A0174]
gi|196047760|ref|ZP_03114953.1| ATP-dependent protease hslV [Bacillus cereus 03BB108]
gi|206972727|ref|ZP_03233663.1| ATP-dependent protease hslV [Bacillus cereus AH1134]
gi|218233809|ref|YP_002368631.1| ATP-dependent protease peptidase subunit [Bacillus cereus B4264]
gi|218904958|ref|YP_002452792.1| ATP-dependent protease hslV [Bacillus cereus AH820]
gi|225865811|ref|YP_002751189.1| ATP-dependent protease HslVU, peptidase subunit [Bacillus cereus
03BB102]
gi|227813262|ref|YP_002813271.1| ATP-dependent protease hslV [Bacillus anthracis str. CDC 684]
gi|228916467|ref|ZP_04080033.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228922584|ref|ZP_04085884.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228928878|ref|ZP_04091910.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935144|ref|ZP_04097971.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947549|ref|ZP_04109839.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228954106|ref|ZP_04116135.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960046|ref|ZP_04121710.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228986973|ref|ZP_04147099.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229047516|ref|ZP_04193106.1| ATP-dependent protease hslV [Bacillus cereus AH676]
gi|229071328|ref|ZP_04204551.1| ATP-dependent protease hslV [Bacillus cereus F65185]
gi|229081085|ref|ZP_04213595.1| ATP-dependent protease hslV [Bacillus cereus Rock4-2]
gi|229111301|ref|ZP_04240854.1| ATP-dependent protease hslV [Bacillus cereus Rock1-15]
gi|229123344|ref|ZP_04252548.1| ATP-dependent protease hslV [Bacillus cereus 95/8201]
gi|229129106|ref|ZP_04258079.1| ATP-dependent protease hslV [Bacillus cereus BDRD-Cer4]
gi|229146401|ref|ZP_04274772.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST24]
gi|229152029|ref|ZP_04280224.1| ATP-dependent protease hslV [Bacillus cereus m1550]
gi|229157406|ref|ZP_04285484.1| ATP-dependent protease hslV [Bacillus cereus ATCC 4342]
gi|229162766|ref|ZP_04290723.1| ATP-dependent protease hslV [Bacillus cereus R309803]
gi|229180106|ref|ZP_04307450.1| ATP-dependent protease hslV [Bacillus cereus 172560W]
gi|229186069|ref|ZP_04313239.1| ATP-dependent protease hslV [Bacillus cereus BGSC 6E1]
gi|229191999|ref|ZP_04318969.1| ATP-dependent protease hslV [Bacillus cereus ATCC 10876]
gi|229603703|ref|YP_002868068.1| ATP-dependent protease HslVU, peptidase subunit [Bacillus anthracis
str. A0248]
gi|254683463|ref|ZP_05147323.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
CNEVA-9066]
gi|254721984|ref|ZP_05183773.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
A1055]
gi|254735868|ref|ZP_05193574.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
Western North America USA6153]
gi|254739606|ref|ZP_05197300.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
Kruger B]
gi|254751199|ref|ZP_05203238.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
Vollum]
gi|301055320|ref|YP_003793531.1| ATP-dependent protease peptidase subunit [Bacillus anthracis CI]
gi|47605666|sp|Q819X6|HSLV_BACCR RecName: Full=ATP-dependent protease subunit HslV
gi|47605672|sp|Q81WK5|HSLV_BACAN RecName: Full=ATP-dependent protease subunit HslV
gi|77416826|sp|Q636J6|HSLV_BACCZ RecName: Full=ATP-dependent protease subunit HslV
gi|85542194|sp|Q6HEY5|HSLV_BACHK RecName: Full=ATP-dependent protease subunit HslV
gi|166221624|sp|A0RHK3|HSLV_BACAH RecName: Full=ATP-dependent protease subunit HslV
gi|226704533|sp|B7JJA8|HSLV_BACC0 RecName: Full=ATP-dependent protease subunit HslV
gi|226704535|sp|B7HDV3|HSLV_BACC4 RecName: Full=ATP-dependent protease subunit HslV
gi|254802329|sp|C3P5N2|HSLV_BACAA RecName: Full=ATP-dependent protease subunit HslV
gi|254802330|sp|C3L797|HSLV_BACAC RecName: Full=ATP-dependent protease subunit HslV
gi|254802331|sp|C1EP54|HSLV_BACC3 RecName: Full=ATP-dependent protease subunit HslV
gi|29897474|gb|AAP10750.1| ATP-dependent protease hslV [Bacillus cereus ATCC 14579]
gi|30258478|gb|AAP27697.1| ATP-dependent protease HslVU, peptidase subunit [Bacillus anthracis
str. Ames]
gi|47504406|gb|AAT33082.1| ATP-dependent protease hslV [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180607|gb|AAT55983.1| ATP-dependent protease hslV [Bacillus anthracis str. Sterne]
gi|49330971|gb|AAT61617.1| ATP-dependent protease hslV (heat shock protein HslV) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51975128|gb|AAU16678.1| ATP-dependent protease (heat shock protein) [Bacillus cereus E33L]
gi|118418277|gb|ABK86696.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Bacillus thuringiensis str. Al
Hakam]
gi|164710953|gb|EDR16525.1| ATP-dependent protease hslV [Bacillus anthracis str. A0488]
gi|167510006|gb|EDR85422.1| ATP-dependent protease hslV [Bacillus anthracis str. A0193]
gi|170125734|gb|EDS94647.1| ATP-dependent protease hslV [Bacillus anthracis str. A0389]
gi|170666384|gb|EDT17167.1| ATP-dependent protease hslV [Bacillus anthracis str. A0465]
gi|172079893|gb|EDT65001.1| ATP-dependent protease hslV [Bacillus anthracis str. A0174]
gi|196021408|gb|EDX60122.1| ATP-dependent protease hslV [Bacillus cereus 03BB108]
gi|206732349|gb|EDZ49535.1| ATP-dependent protease hslV [Bacillus cereus AH1134]
gi|218161766|gb|ACK61758.1| ATP-dependent protease hslV [Bacillus cereus B4264]
gi|218540110|gb|ACK92508.1| ATP-dependent protease hslV [Bacillus cereus AH820]
gi|225786526|gb|ACO26743.1| ATP-dependent protease HslVU, peptidase subunit [Bacillus cereus
03BB102]
gi|227005202|gb|ACP14945.1| ATP-dependent protease hslV [Bacillus anthracis str. CDC 684]
gi|228591550|gb|EEK49399.1| ATP-dependent protease hslV [Bacillus cereus ATCC 10876]
gi|228597488|gb|EEK55138.1| ATP-dependent protease hslV [Bacillus cereus BGSC 6E1]
gi|228603315|gb|EEK60792.1| ATP-dependent protease hslV [Bacillus cereus 172560W]
gi|228620648|gb|EEK77517.1| ATP-dependent protease hslV [Bacillus cereus R309803]
gi|228626133|gb|EEK82882.1| ATP-dependent protease hslV [Bacillus cereus ATCC 4342]
gi|228631378|gb|EEK88012.1| ATP-dependent protease hslV [Bacillus cereus m1550]
gi|228637034|gb|EEK93493.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST24]
gi|228654343|gb|EEL10208.1| ATP-dependent protease hslV [Bacillus cereus BDRD-Cer4]
gi|228660120|gb|EEL15756.1| ATP-dependent protease hslV [Bacillus cereus 95/8201]
gi|228672077|gb|EEL27368.1| ATP-dependent protease hslV [Bacillus cereus Rock1-15]
gi|228702129|gb|EEL54605.1| ATP-dependent protease hslV [Bacillus cereus Rock4-2]
gi|228711782|gb|EEL63734.1| ATP-dependent protease hslV [Bacillus cereus F65185]
gi|228723763|gb|EEL75118.1| ATP-dependent protease hslV [Bacillus cereus AH676]
gi|228772751|gb|EEM21191.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228799562|gb|EEM46515.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228805672|gb|EEM52262.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228812069|gb|EEM58400.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824509|gb|EEM70314.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830685|gb|EEM76290.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228837013|gb|EEM82354.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228843046|gb|EEM88128.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229268111|gb|ACQ49748.1| ATP-dependent protease HslVU, peptidase subunit [Bacillus anthracis
str. A0248]
gi|300377489|gb|ADK06393.1| ATP-dependent protease peptidase subunit [Bacillus cereus biovar
anthracis str. CI]
Length = 180
Score = 207 bits (527), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 133/177 (75%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G V MK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA RAL S +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 180
>gi|92112733|ref|YP_572661.1| ATP-dependent protease peptidase subunit [Chromohalobacter
salexigens DSM 3043]
gi|91795823|gb|ABE57962.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Chromohalobacter salexigens DSM 3043]
Length = 172
Score = 207 bits (527), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ V +AGDGQVSLG TVMK NA KVRR+ G ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGENVALAGDGQVSLGNTVMKGNASKVRRIHHGKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +L++Y L++++VEL+K+WR D+ LR LEAM+ +ADK +L++TG GDV+EPE G++
Sbjct: 62 EAQLDKYQGHLVKAAVELSKEWRTDRALRRLEAMLAVADKNASLILTGNGDVVEPERGII 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA ++ARAL+ +T A I K++ IA DICV+TNH+I LE L
Sbjct: 122 AIGSGGHYAQASARALLENTDLDARTITEKSLEIAGDICVFTNHHITLEEL 172
>gi|242242535|ref|ZP_04796980.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
epidermidis W23144]
gi|242233962|gb|EES36274.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
epidermidis W23144]
gi|319401457|gb|EFV89667.1| ATP-dependent protease hslV [Staphylococcus epidermidis FRI909]
Length = 180
Score = 207 bits (527), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 137/176 (77%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 5 LHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK L+++G G+V+ P+
Sbjct: 65 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILIVSGTGEVIAPD 124
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL +TQ SA E+A +++ +AADICV+TN NI++ETL
Sbjct: 125 DDLIAIGSGGNYALSAGRALKRHATQLSASEMAYESLKVAADICVFTNDNIIVETL 180
>gi|110637990|ref|YP_678197.1| ATP-dependent protease peptidase subunit [Cytophaga hutchinsonii
ATCC 33406]
gi|122966798|sp|Q11UQ9|HSLV_CYTH3 RecName: Full=ATP-dependent protease subunit HslV
gi|110280671|gb|ABG58857.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Cytophaga hutchinsonii ATCC 33406]
Length = 180
Score = 207 bits (527), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 134/175 (76%), Gaps = 2/175 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+HATT++ +R +G + I DGQ +LG TV+K +KVR+L +G ++ GFAGS+ADAFTL
Sbjct: 3 KIHATTVVAIRHNGQISIGADGQATLGNTVVKDYVKKVRKLMEGKVLCGFAGSTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LER E+KL Y + R+++ELAKDWR D+YLR LEAM+++ +K L+I+G GDV+EP+
Sbjct: 63 LERFEEKLNTYAGNMKRAAIELAKDWRTDRYLRKLEAMMIVVNKDELLLISGTGDVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
N +++IGSG YA SAA AL +T SA E+ R+++SIAADIC+YTNHN V+ET
Sbjct: 123 NDILSIGSGSMYAQSAAAALKKHATHLSAPEMVRESLSIAADICIYTNHNFVIET 177
>gi|42782922|ref|NP_980169.1| ATP-dependent protease peptidase subunit [Bacillus cereus ATCC
10987]
gi|47570331|ref|ZP_00240976.1| heat shock protein HslV [Bacillus cereus G9241]
gi|206978535|ref|ZP_03239385.1| ATP-dependent protease hslV [Bacillus cereus H3081.97]
gi|217961250|ref|YP_002339818.1| ATP-dependent protease peptidase subunit [Bacillus cereus AH187]
gi|229031460|ref|ZP_04187460.1| ATP-dependent protease hslV [Bacillus cereus AH1271]
gi|229140472|ref|ZP_04269027.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST26]
gi|229174496|ref|ZP_04302028.1| ATP-dependent protease hslV [Bacillus cereus MM3]
gi|229197940|ref|ZP_04324655.1| ATP-dependent protease hslV [Bacillus cereus m1293]
gi|47605595|sp|P61476|HSLV_BACC1 RecName: Full=ATP-dependent protease subunit HslV
gi|226704536|sp|B7HLG3|HSLV_BACC7 RecName: Full=ATP-dependent protease subunit HslV
gi|42738849|gb|AAS42777.1| ATP-dependent protease hslV [Bacillus cereus ATCC 10987]
gi|47552996|gb|EAL11402.1| heat shock protein HslV [Bacillus cereus G9241]
gi|206743258|gb|EDZ54715.1| ATP-dependent protease hslV [Bacillus cereus H3081.97]
gi|217063650|gb|ACJ77900.1| ATP-dependent protease hslV [Bacillus cereus AH187]
gi|228585519|gb|EEK43622.1| ATP-dependent protease hslV [Bacillus cereus m1293]
gi|228609056|gb|EEK66346.1| ATP-dependent protease hslV [Bacillus cereus MM3]
gi|228643033|gb|EEK99309.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST26]
gi|228729749|gb|EEL80729.1| ATP-dependent protease hslV [Bacillus cereus AH1271]
gi|324327727|gb|ADY22987.1| ATP-dependent protease subunit HslV [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 180
Score = 207 bits (527), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 133/177 (75%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G V MK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA RAL S +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLDIAGDICVYTNHNIIVEEL 180
>gi|15924243|ref|NP_371777.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus Mu50]
gi|15926836|ref|NP_374369.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus N315]
gi|21282865|ref|NP_645953.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus MW2]
gi|49483416|ref|YP_040640.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus MRSA252]
gi|49486092|ref|YP_043313.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57651822|ref|YP_186128.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus COL]
gi|87160493|ref|YP_493843.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|88194961|ref|YP_499761.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|148267743|ref|YP_001246686.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus JH9]
gi|150393801|ref|YP_001316476.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus JH1]
gi|151221375|ref|YP_001332197.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus str. Newman]
gi|156979574|ref|YP_001441833.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus Mu3]
gi|161509419|ref|YP_001575078.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|221142043|ref|ZP_03566536.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus str. JKD6009]
gi|253731872|ref|ZP_04866037.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253733509|ref|ZP_04867674.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus TCH130]
gi|255006040|ref|ZP_05144641.2| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus Mu50-omega]
gi|257425307|ref|ZP_05601732.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427968|ref|ZP_05604366.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257430601|ref|ZP_05606983.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
68-397]
gi|257433361|ref|ZP_05609719.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus E1410]
gi|257436203|ref|ZP_05612250.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus M876]
gi|257795691|ref|ZP_05644670.1| heat shock protein HslV [Staphylococcus aureus A9781]
gi|258415915|ref|ZP_05682185.1| heat shock protein HslV [Staphylococcus aureus A9763]
gi|258421677|ref|ZP_05684601.1| heat shock protein HslV [Staphylococcus aureus A9719]
gi|258423906|ref|ZP_05686791.1| heat shock protein HslVU [Staphylococcus aureus A9635]
gi|258434833|ref|ZP_05688907.1| heat shock protein HslV [Staphylococcus aureus A9299]
gi|258444591|ref|ZP_05692920.1| heat shock protein HslVU [Staphylococcus aureus A8115]
gi|258447576|ref|ZP_05695720.1| heat shock protein HslVU [Staphylococcus aureus A6300]
gi|258449418|ref|ZP_05697521.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
A6224]
gi|258452552|ref|ZP_05700558.1| heat shock protein HslV [Staphylococcus aureus A5948]
gi|258454797|ref|ZP_05702761.1| heat shock protein HslV [Staphylococcus aureus A5937]
gi|262048147|ref|ZP_06021034.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
D30]
gi|262051315|ref|ZP_06023538.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
930918-3]
gi|269202869|ref|YP_003282138.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus ED98]
gi|282892741|ref|ZP_06300976.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus A8117]
gi|282903808|ref|ZP_06311696.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus C160]
gi|282905571|ref|ZP_06313426.1| ATP-dependent HslUV protease peptidase subunit HslV [Staphylococcus
aureus subsp. aureus Btn1260]
gi|282908546|ref|ZP_06316376.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910825|ref|ZP_06318628.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914030|ref|ZP_06321817.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus M899]
gi|282916513|ref|ZP_06324271.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus subsp. aureus D139]
gi|282918952|ref|ZP_06326687.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
C427]
gi|282920497|ref|ZP_06328218.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus A9765]
gi|282924075|ref|ZP_06331751.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus subsp. aureus C101]
gi|282927595|ref|ZP_06335211.1| ATP-dependent protease hslV [Staphylococcus aureus A10102]
gi|283770317|ref|ZP_06343209.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
H19]
gi|284024246|ref|ZP_06378644.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus 132]
gi|293501062|ref|ZP_06666913.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus subsp. aureus 58-424]
gi|293510024|ref|ZP_06668732.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
M809]
gi|293526610|ref|ZP_06671295.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus M1015]
gi|294848248|ref|ZP_06788995.1| ATP-dependent HslUV protease [Staphylococcus aureus A9754]
gi|295406189|ref|ZP_06815996.1| ATP-dependent HslUV protease [Staphylococcus aureus A8819]
gi|295427740|ref|ZP_06820372.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|296274811|ref|ZP_06857318.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus MR1]
gi|297208101|ref|ZP_06924532.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297244417|ref|ZP_06928300.1| ATP-dependent protease hslV [Staphylococcus aureus A8796]
gi|297591302|ref|ZP_06949940.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
MN8]
gi|300912182|ref|ZP_07129625.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
TCH70]
gi|304381183|ref|ZP_07363836.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|54037329|sp|P65797|HSLV_STAAN RecName: Full=ATP-dependent protease subunit HslV
gi|54037330|sp|P65798|HSLV_STAAW RecName: Full=ATP-dependent protease subunit HslV
gi|54041541|sp|P65796|HSLV_STAAM RecName: Full=ATP-dependent protease subunit HslV
gi|56748979|sp|Q6G9W0|HSLV_STAAS RecName: Full=ATP-dependent protease subunit HslV
gi|56749033|sp|Q6GHI2|HSLV_STAAR RecName: Full=ATP-dependent protease subunit HslV
gi|71152139|sp|Q5HGH9|HSLV_STAAC RecName: Full=ATP-dependent protease subunit HslV
gi|122539695|sp|Q2FZ29|HSLV_STAA8 RecName: Full=ATP-dependent protease subunit HslV
gi|123486189|sp|Q2FHI5|HSLV_STAA3 RecName: Full=ATP-dependent protease subunit HslV
gi|166223003|sp|A7X1M9|HSLV_STAA1 RecName: Full=ATP-dependent protease subunit HslV
gi|172048863|sp|A6QGF3|HSLV_STAAE RecName: Full=ATP-dependent protease subunit HslV
gi|189036243|sp|A6U171|HSLV_STAA2 RecName: Full=ATP-dependent protease subunit HslV
gi|189036244|sp|A5ISD7|HSLV_STAA9 RecName: Full=ATP-dependent protease subunit HslV
gi|189036245|sp|A8Z3T3|HSLV_STAAT RecName: Full=ATP-dependent protease subunit HslV
gi|13701053|dbj|BAB42348.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus N315]
gi|14247023|dbj|BAB57415.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus Mu50]
gi|21204304|dbj|BAB95001.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus MW2]
gi|49241545|emb|CAG40231.1| putative ATP-dependent protease [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49244535|emb|CAG42964.1| putative ATP-dependent protease [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57286008|gb|AAW38102.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus COL]
gi|87126467|gb|ABD20981.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202519|gb|ABD30329.1| heat shock protein HslV, putative [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|147740812|gb|ABQ49110.1| 20S proteasome, A and B subunits [Staphylococcus aureus subsp.
aureus JH9]
gi|149946253|gb|ABR52189.1| 20S proteasome A and B subunits [Staphylococcus aureus subsp.
aureus JH1]
gi|150374175|dbj|BAF67435.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus str. Newman]
gi|156721709|dbj|BAF78126.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus Mu3]
gi|160368228|gb|ABX29199.1| T01 family HslV component of HsIUV peptidase [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|253724282|gb|EES93011.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253728563|gb|EES97292.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus TCH130]
gi|257271764|gb|EEV03902.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus
55/2053]
gi|257274809|gb|EEV06296.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257278729|gb|EEV09348.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
68-397]
gi|257281454|gb|EEV11591.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus E1410]
gi|257284485|gb|EEV14605.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus M876]
gi|257789663|gb|EEV28003.1| heat shock protein HslV [Staphylococcus aureus A9781]
gi|257839251|gb|EEV63725.1| heat shock protein HslV [Staphylococcus aureus A9763]
gi|257842363|gb|EEV66788.1| heat shock protein HslV [Staphylococcus aureus A9719]
gi|257845935|gb|EEV69964.1| heat shock protein HslVU [Staphylococcus aureus A9635]
gi|257849194|gb|EEV73176.1| heat shock protein HslV [Staphylococcus aureus A9299]
gi|257850084|gb|EEV74037.1| heat shock protein HslVU [Staphylococcus aureus A8115]
gi|257853767|gb|EEV76726.1| heat shock protein HslVU [Staphylococcus aureus A6300]
gi|257857406|gb|EEV80304.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
A6224]
gi|257859770|gb|EEV82612.1| heat shock protein HslV [Staphylococcus aureus A5948]
gi|257863180|gb|EEV85944.1| heat shock protein HslV [Staphylococcus aureus A5937]
gi|259160690|gb|EEW45711.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
930918-3]
gi|259163713|gb|EEW48268.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
D30]
gi|262075159|gb|ACY11132.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus ED98]
gi|269940744|emb|CBI49126.1| putative ATP-dependent protease [Staphylococcus aureus subsp.
aureus TW20]
gi|282314047|gb|EFB44439.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus subsp. aureus C101]
gi|282316762|gb|EFB47136.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
C427]
gi|282319000|gb|EFB49352.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus subsp. aureus D139]
gi|282322098|gb|EFB52422.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus M899]
gi|282325430|gb|EFB55739.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327608|gb|EFB57891.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282330863|gb|EFB60377.1| ATP-dependent HslUV protease peptidase subunit HslV [Staphylococcus
aureus subsp. aureus Btn1260]
gi|282590598|gb|EFB95675.1| ATP-dependent protease hslV [Staphylococcus aureus A10102]
gi|282594159|gb|EFB99146.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus A9765]
gi|282595426|gb|EFC00390.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus C160]
gi|282764738|gb|EFC04863.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus A8117]
gi|283460464|gb|EFC07554.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
H19]
gi|283470468|emb|CAQ49679.1| ATP-dependent protease HslV [Staphylococcus aureus subsp. aureus
ST398]
gi|285816935|gb|ADC37422.1| ATP-dependent protease HslV [Staphylococcus aureus 04-02981]
gi|290920682|gb|EFD97745.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus M1015]
gi|291096067|gb|EFE26328.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus subsp. aureus 58-424]
gi|291466968|gb|EFF09486.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
M809]
gi|294825048|gb|EFG41470.1| ATP-dependent HslUV protease [Staphylococcus aureus A9754]
gi|294968777|gb|EFG44799.1| ATP-dependent HslUV protease [Staphylococcus aureus A8819]
gi|295128098|gb|EFG57732.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|296887344|gb|EFH26246.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297178447|gb|EFH37693.1| ATP-dependent protease hslV [Staphylococcus aureus A8796]
gi|297576188|gb|EFH94904.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
MN8]
gi|298694545|gb|ADI97767.1| ATP-dependent protease heat shock protein [Staphylococcus aureus
subsp. aureus ED133]
gi|300886428|gb|EFK81630.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
TCH70]
gi|302332859|gb|ADL23052.1| T01 family HslV component of HsIUV peptidase [Staphylococcus aureus
subsp. aureus JKD6159]
gi|302751076|gb|ADL65253.1| T01 family HslV component of HsIUV peptidase [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|304340166|gb|EFM06107.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312438368|gb|ADQ77439.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
TCH60]
gi|312829647|emb|CBX34489.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315131046|gb|EFT87030.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus CGS03]
gi|315194140|gb|EFU24533.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus CGS00]
gi|315198493|gb|EFU28822.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus CGS01]
gi|320140930|gb|EFW32777.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
aureus subsp. aureus MRSA131]
gi|320144354|gb|EFW36120.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
aureus subsp. aureus MRSA177]
gi|329313923|gb|AEB88336.1| ATP-dependent protease subunit HslV [Staphylococcus aureus subsp.
aureus T0131]
gi|329727322|gb|EGG63778.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
aureus subsp. aureus 21172]
gi|329727843|gb|EGG64294.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
aureus subsp. aureus 21189]
gi|329733602|gb|EGG69930.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
aureus subsp. aureus 21193]
Length = 181
Score = 207 bits (527), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 137/176 (77%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 6 LHATTIYAVRHNGKAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 66 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPD 125
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL ++ SAEE+A +++ +AADICV+TN NIV+ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKRHASHLSAEEMAYESLKVAADICVFTNDNIVVETL 181
>gi|152972727|ref|YP_001337873.1| ATP-dependent protease peptidase subunit [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|206579620|ref|YP_002241199.1| ATP-dependent protease HslV [Klebsiella pneumoniae 342]
gi|238892335|ref|YP_002917069.1| ATP-dependent protease peptidase subunit [Klebsiella pneumoniae
NTUH-K2044]
gi|288937835|ref|YP_003441894.1| 20S proteasome A and subunit betas [Klebsiella variicola At-22]
gi|290513061|ref|ZP_06552424.1| ATP-dependent protease hslV [Klebsiella sp. 1_1_55]
gi|166222982|sp|A6TGC2|HSLV_KLEP7 RecName: Full=ATP-dependent protease subunit HslV
gi|238065880|sp|B5XZ36|HSLV_KLEP3 RecName: Full=ATP-dependent protease subunit HslV
gi|150957576|gb|ABR79606.1| ATP-dependent protease peptidase subunit [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|206568678|gb|ACI10454.1| ATP-dependent protease HslV [Klebsiella pneumoniae 342]
gi|238544651|dbj|BAH61002.1| ATP-dependent protease peptidase subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|288892544|gb|ADC60862.1| 20S proteasome A and B subunits [Klebsiella variicola At-22]
gi|289774443|gb|EFD82448.1| ATP-dependent protease hslV [Klebsiella sp. 1_1_55]
Length = 176
Score = 207 bits (527), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T A +IA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTDMGARDIAEKALDIAGDICIYTNHFHTIEEL 172
>gi|251797451|ref|YP_003012182.1| ATP-dependent protease peptidase subunit [Paenibacillus sp. JDR-2]
gi|247545077|gb|ACT02096.1| 20S proteasome A and B subunits [Paenibacillus sp. JDR-2]
Length = 181
Score = 207 bits (527), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 137/178 (76%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
++ HATTI VR +G IAGDGQV+ G +V MK A+KVRRL +G +IAGFAGS ADA
Sbjct: 3 MEFHATTICAVRHEGKGAIAGDGQVTFGNSVVMKNKAKKVRRLYRGQVIAGFAGSVADAI 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE++ L R++VELAKDWR D+ LR LEA++L+ D++ L+I+G G+++E
Sbjct: 63 TLFEKFEAKLEEHHGNLQRAAVELAKDWRTDRILRKLEALMLVMDQSGLLLISGNGEIIE 122
Query: 130 PENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGG+YALSAARAL + A++IAR A+ AADICVYTNHNI++E +
Sbjct: 123 PDDGILAIGSGGNYALSAARALQKHAPHMEAKDIARAALETAADICVYTNHNIIVEEI 180
>gi|257471628|ref|ZP_05635627.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
LSR1 (Acyrthosiphon pisum)]
Length = 176
Score = 207 bits (527), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR VVI GDGQ +LG T+MK+N +K+R L +IAGFAG +ADAFTL E
Sbjct: 2 TTILSVRLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
+KKL Y QL R+++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PEN ++
Sbjct: 62 DKKLAMYQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGGSYA S+ARAL+ N A +I RK+++IAA+IC+YTNHN ++ L
Sbjct: 122 AIGSGGSYAQSSARALIENTNLDANQIVRKSLNIAANICIYTNHNFTIKEL 172
>gi|119773581|ref|YP_926321.1| ATP-dependent protease peptidase subunit [Shewanella amazonensis
SB2B]
gi|166222997|sp|A1S2P5|HSLV_SHEAM RecName: Full=ATP-dependent protease subunit HslV
gi|119766081|gb|ABL98651.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella amazonensis SB2B]
Length = 174
Score = 207 bits (526), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHGKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L+R++VELAKDWR D+ LR LEA++ +AD +L+ITG GDV++PEN ++
Sbjct: 62 EAKLEMHQGHLMRAAVELAKDWRTDRMLRKLEALLAVADAESSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A +AA AL+ +T A EIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNFAQAAATALLENTDLGALEIAEKSLTIAGDICVFTNQFKTIEEL 172
>gi|332995305|gb|AEF05360.1| ATP-dependent protease subunit HslV [Alteromonas sp. SN2]
Length = 174
Score = 207 bits (526), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 136/171 (79%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VV+AGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGNQVVMAGDGQVSLGNTVMKGNARKVRRLYHDKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L +++VELAKDWR D+ LR LEA++ +AD+T + +ITG GDV++PEN ++
Sbjct: 62 EAKLEAHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASFIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA ++A AL+ +T+ +A+EIA K+++IA DICV+TNH+ ++ L
Sbjct: 122 AIGSGGNYAQASAIALLENTELTAKEIAEKSLTIAGDICVFTNHSQTVDVL 172
>gi|304398971|ref|ZP_07380840.1| 20S proteasome A and B subunits [Pantoea sp. aB]
gi|308188607|ref|YP_003932738.1| ATP-dependent protease HslV (heat shock protein) [Pantoea vagans
C9-1]
gi|304353431|gb|EFM17809.1| 20S proteasome A and B subunits [Pantoea sp. aB]
gi|308059117|gb|ADO11289.1| ATP-dependent protease HslV (heat shock protein) [Pantoea vagans
C9-1]
Length = 176
Score = 207 bits (526), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD++ +L+I+G GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADESASLIISGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG +A +AARAL+ +T+ A +I K+++IA DIC+YTNHN+ E L
Sbjct: 122 AIGSGGPFAQAAARALLENTEMGARDIVEKSLNIAGDICIYTNHNVNFEEL 172
>gi|259906820|ref|YP_002647176.1| ATP-dependent protease peptidase subunit [Erwinia pyrifoliae
Ep1/96]
gi|224962442|emb|CAX53897.1| ATP-dependent protease HslV [Erwinia pyrifoliae Ep1/96]
gi|283476607|emb|CAY72435.1| ATP-dependent protease HslV [Erwinia pyrifoliae DSM 12163]
gi|310766032|gb|ADP10982.1| ATP-dependent protease peptidase subunit [Erwinia sp. Ejp617]
Length = 176
Score = 207 bits (526), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T A +I KA+ IA DIC+YTNH++ +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTDIGARDIVEKALGIAGDICIYTNHHLTIEEL 172
>gi|300114764|ref|YP_003761339.1| 20S proteasome A and B subunits [Nitrosococcus watsonii C-113]
gi|299540701|gb|ADJ29018.1| 20S proteasome A and B subunits [Nitrosococcus watsonii C-113]
Length = 179
Score = 206 bits (525), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 103/174 (59%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL+VR+ VVI GDGQVS+ VMK NARKVRRL +IAGFAG +ADAFTL
Sbjct: 4 FRGTTILSVRRQEQVVIGGDGQVSMNSIVMKGNARKVRRLFHDQVIAGFAGGTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD + VI+G GDV+EPE
Sbjct: 64 ERFEAKLEKHQGNLTRAAVELAKDWRSDRSLRRLEALLAVADHKASYVISGNGDVIEPEY 123
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG YA +AARAL+ +T SA I KA+SIAADIC+YTN ++ +E L
Sbjct: 124 GLIAIGSGGPYAQAAARALLENTDFSARAIVEKALSIAADICIYTNTHLTIEEL 177
>gi|317152585|ref|YP_004120633.1| 20S proteasome subunits A/B [Desulfovibrio aespoeensis Aspo-2]
gi|316942836|gb|ADU61887.1| 20S proteasome A and B subunits [Desulfovibrio aespoeensis Aspo-2]
Length = 182
Score = 206 bits (525), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTI+ V+ D +AGDGQV+LGQ+V MK ARKVRR+ K +I GFAG++ADAF
Sbjct: 1 MEIRGTTIIAVKDDNGTAMAGDGQVTLGQSVAMKHTARKVRRIYKDKVIIGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER E KLE Y LLR++VELAKDWR DKYLR LEAM+L AD L+I+G GDV+E
Sbjct: 61 TLSERFEGKLETYSGNLLRAAVELAKDWRTDKYLRRLEAMLLAADGEHILIISGTGDVIE 120
Query: 130 PENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
P++G+ AIGSGG YAL+A RAL +T +A IA KAM IAA+ICV+TN IVLET
Sbjct: 121 PDDGLAAIGSGGPYALAAGRALRRNTDFTAAVIATKAMEIAAEICVFTNDKIVLET 176
>gi|119474654|ref|ZP_01615007.1| ATP-dependent protease peptidase subunit [marine gamma
proteobacterium HTCC2143]
gi|119450857|gb|EAW32090.1| ATP-dependent protease peptidase subunit [marine gamma
proteobacterium HTCC2143]
Length = 169
Score = 206 bits (525), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 130/166 (78%), Gaps = 1/166 (0%)
Query: 21 VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
+R++G VI GDGQVS+G TVMK NARKVRRL K +IAGFAG +ADAFTL E E +LE
Sbjct: 1 MRRNGKAVIGGDGQVSMGNTVMKGNARKVRRLYKDQVIAGFAGGTADAFTLFELFESQLE 60
Query: 81 QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSG 140
+Y QL R++VELAK WR ++ LR LEA++ +ADKT +L+ITG GDV+EPE+ ++AIGSG
Sbjct: 61 KYQGQLTRAAVELAKMWRTERSLRQLEALLAVADKTTSLIITGNGDVIEPEDNLIAIGSG 120
Query: 141 GSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G YA SAA+AL+ +T SA +I ++++IA DICVYTNHN +E L
Sbjct: 121 GPYAQSAAKALLENTDLSAHDIVERSLAIAGDICVYTNHNRTIEEL 166
>gi|293602499|ref|ZP_06684945.1| ATP-dependent protease HslV [Achromobacter piechaudii ATCC 43553]
gi|292819261|gb|EFF78296.1| ATP-dependent protease HslV [Achromobacter piechaudii ATCC 43553]
Length = 179
Score = 206 bits (525), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K ARK+RRL I+AGFAG++ADAFTL
Sbjct: 3 QFHATTIVCVRRGNRVALGGDGQVTLGNIVVKGTARKIRRLYHDKILAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+++AD TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGNLMRAAVELTRDWRTDRVLRRLEAMLIVADTEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA AL+ +T+ S E + ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELSPEAVVKQSLEIAGDLCIYTNQNHVIETL 177
>gi|311109412|ref|YP_003982265.1| ATP-dependent protease HslV [Achromobacter xylosoxidans A8]
gi|310764101|gb|ADP19550.1| ATP-dependent protease HslV [Achromobacter xylosoxidans A8]
Length = 179
Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K ARK+RRL I+AGFAG++ADAFTL
Sbjct: 3 QFHATTIVCVRRGNRVALGGDGQVTLGNIVIKGTARKIRRLYHDKILAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+++AD TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGNLMRAAVELTRDWRTDRVLRRLEAMLIVADAEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA AL+ +T+ S E + ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELSPEAVVKQSLEIAGDLCIYTNQNHVIETL 177
>gi|148977245|ref|ZP_01813872.1| ATP-dependent protease peptidase subunit [Vibrionales bacterium
SWAT-3]
gi|145963527|gb|EDK28790.1| ATP-dependent protease peptidase subunit [Vibrionales bacterium
SWAT-3]
Length = 182
Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKV RL ++AGFAG +ADAFTL E+
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVHRLYNDKVLAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A +AA AL+ +T A EIA K+++IA DICV+TNH+ +E L+
Sbjct: 122 AIGSGGNFAQAAATALLENTDLDAREIAEKSLNIAGDICVFTNHHHTVEELE 173
>gi|291619408|ref|YP_003522150.1| HslV [Pantoea ananatis LMG 20103]
gi|291154438|gb|ADD79022.1| HslV [Pantoea ananatis LMG 20103]
Length = 209
Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 135/174 (77%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL
Sbjct: 32 LPVTTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLF 91
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E E+KLE + L++++VELAKDWR D+ LR LEA++ +AD++ +L+I+G GDV++PEN
Sbjct: 92 ELFERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADESASLIISGNGDVIQPEN 151
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++AIGSGG YA +AARAL+ +++ A +I K+++IA DIC+YTNHN+ E L
Sbjct: 152 DLIAIGSGGPYAQAAARALLENSELGARDIVEKSLNIAGDICIYTNHNVNFEEL 205
>gi|327395731|dbj|BAK13153.1| ATP-dependent protease HslV HslV [Pantoea ananatis AJ13355]
Length = 195
Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 135/174 (77%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL
Sbjct: 18 LPVTTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLF 77
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E E+KLE + L++++VELAKDWR D+ LR LEA++ +AD++ +L+I+G GDV++PEN
Sbjct: 78 ELFERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADESASLIISGNGDVIQPEN 137
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++AIGSGG YA +AARAL+ +++ A +I K+++IA DIC+YTNHN+ E L
Sbjct: 138 DLIAIGSGGPYAQAAARALLENSELGARDIVEKSLNIAGDICIYTNHNVNFEEL 191
>gi|317484380|ref|ZP_07943299.1| proteasome A-type and B-type [Bilophila wadsworthia 3_1_6]
gi|316924388|gb|EFV45555.1| proteasome A-type and B-type [Bilophila wadsworthia 3_1_6]
Length = 177
Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 137/177 (77%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTIL VR G V + GDGQV++GQ+ VMK A+KVRR+ K I+AGFAG++ADAF
Sbjct: 1 MELRGTTILAVRHKGHVALIGDGQVTMGQSIVMKHTAKKVRRMYKDQIVAGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER + LEQ L+R++VELAKDWR DK+LR LEAM+L+AD+ TLV+TG GDV+E
Sbjct: 61 TLFERFDAHLEQTGGNLIRAAVELAKDWRSDKFLRKLEAMLLVADRDHTLVLTGTGDVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G+ +IGSGG YALSAARAL+ + AE+IA ++M IA+++CV+TN + LE L
Sbjct: 121 PDDGIASIGSGGPYALSAARALVRHSDLGAEDIALESMKIASELCVFTNGHYTLEVL 177
>gi|241765139|ref|ZP_04763127.1| 20S proteasome A and B subunits [Acidovorax delafieldii 2AN]
gi|241365218|gb|EER60065.1| 20S proteasome A and B subunits [Acidovorax delafieldii 2AN]
Length = 189
Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 136/178 (76%), Gaps = 5/178 (2%)
Query: 13 MHATTILTVRKD---GV-VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TTIL+VR+ GV V I GDGQV+LG V+K ARKVR+L G ++AGFAG++ADA
Sbjct: 12 FHGTTILSVRRQTPGGVQVAIGGDGQVTLGNIVVKGTARKVRKLYHGKVLAGFAGATADA 71
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL ER E KLE++ L R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GDVL
Sbjct: 72 FTLFERFEAKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADASASLIITGNGDVL 131
Query: 129 EPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPE G++AIGSGG+YA SAA+AL+ +T SA+EI +K++ IA ++C+YTN + +ETL
Sbjct: 132 EPEQGIVAIGSGGAYAHSAAKALLVNTDLSAQEIVKKSLEIAGELCIYTNMSHTIETL 189
>gi|238798293|ref|ZP_04641777.1| ATP-dependent protease hslV [Yersinia mollaretii ATCC 43969]
gi|238717840|gb|EEQ09672.1| ATP-dependent protease hslV [Yersinia mollaretii ATCC 43969]
Length = 176
Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNQVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLDNTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|163941568|ref|YP_001646452.1| ATP-dependent protease peptidase subunit [Bacillus
weihenstephanensis KBAB4]
gi|229013013|ref|ZP_04170178.1| ATP-dependent protease hslV [Bacillus mycoides DSM 2048]
gi|229061433|ref|ZP_04198778.1| ATP-dependent protease hslV [Bacillus cereus AH603]
gi|229134637|ref|ZP_04263447.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST196]
gi|229168569|ref|ZP_04296292.1| ATP-dependent protease hslV [Bacillus cereus AH621]
gi|229486308|sp|A9VT68|HSLV_BACWK RecName: Full=ATP-dependent protease subunit HslV
gi|163863765|gb|ABY44824.1| 20S proteasome A and B subunits [Bacillus weihenstephanensis KBAB4]
gi|228614975|gb|EEK72077.1| ATP-dependent protease hslV [Bacillus cereus AH621]
gi|228648898|gb|EEL04923.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST196]
gi|228717856|gb|EEL69504.1| ATP-dependent protease hslV [Bacillus cereus AH603]
gi|228748267|gb|EEL98127.1| ATP-dependent protease hslV [Bacillus mycoides DSM 2048]
Length = 180
Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G V MK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG YAL+A RAL S +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGHYALAAGRALKQHASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 180
>gi|77165803|ref|YP_344328.1| ATP-dependent protease peptidase subunit [Nitrosococcus oceani ATCC
19707]
gi|254433381|ref|ZP_05046889.1| peptidase, T1 family [Nitrosococcus oceani AFC27]
gi|123593709|sp|Q3J8P8|HSLV_NITOC RecName: Full=ATP-dependent protease subunit HslV
gi|76884117|gb|ABA58798.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Nitrosococcus oceani ATCC 19707]
gi|207089714|gb|EDZ66985.1| peptidase, T1 family [Nitrosococcus oceani AFC27]
Length = 179
Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/174 (59%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL+VR+ VVI GDGQVS+ VMK NARKVRRL +IAGFAG +ADAFTL
Sbjct: 4 FRGTTILSVRRQEQVVIGGDGQVSMNNIVMKGNARKVRRLFHNQVIAGFAGGTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD + VI+G GDV+EPE
Sbjct: 64 ERFEAKLEKHQGNLTRAAVELAKDWRSDRSLRRLEALLAVADHKASYVISGNGDVIEPEY 123
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG YA +AARAL+ +T SA I KA+SIAADIC+YTN ++ +E L
Sbjct: 124 GLIAIGSGGPYAQAAARALLENTDFSARVIVEKALSIAADICIYTNTHLTVEEL 177
>gi|238789598|ref|ZP_04633382.1| ATP-dependent protease hslV [Yersinia frederiksenii ATCC 33641]
gi|238722351|gb|EEQ14007.1| ATP-dependent protease hslV [Yersinia frederiksenii ATCC 33641]
Length = 174
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTELDARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|332159731|ref|YP_004296308.1| ATP-dependent protease peptidase subunit [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|318603862|emb|CBY25360.1| ATP-dependent protease HslV [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325663961|gb|ADZ40605.1| ATP-dependent protease peptidase subunit [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
Length = 174
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL IIAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNDKIIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|238754733|ref|ZP_04616085.1| ATP-dependent protease hslV [Yersinia ruckeri ATCC 29473]
gi|238707041|gb|EEP99406.1| ATP-dependent protease hslV [Yersinia ruckeri ATCC 29473]
Length = 176
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|74318559|ref|YP_316299.1| ATP-dependent protease peptidase subunit [Thiobacillus
denitrificans ATCC 25259]
gi|123611232|sp|Q3SFW2|HSLV_THIDA RecName: Full=ATP-dependent protease subunit HslV
gi|74058054|gb|AAZ98494.1| putative heat shock protein [Thiobacillus denitrificans ATCC 25259]
Length = 188
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR+ V + GDGQV+LG V+K+ ARK+RRL + ++AGFAG +ADAFTL
Sbjct: 3 QYRGTTILSVRRGAEVALGGDGQVTLGNIVIKSTARKIRRLYQEKVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+++ LLRS+VELAKDWR D+ LR LEAM+ +AD+ +L+ITG GDVLEPE
Sbjct: 63 FERFEAKLDKHSGHLLRSAVELAKDWRTDRMLRRLEAMLAVADREHSLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAE-EIARKAMSIAADICVYTNHNIVLETL 185
G+ AIGSGG++A SAARAL+ + A EI +K+++IA DIC+Y+N N V+E L
Sbjct: 123 LGIAAIGSGGAFAQSAARALLENTDLAPLEIVKKSLTIAGDICIYSNQNHVIEVL 177
>gi|254482630|ref|ZP_05095868.1| peptidase, T1 family [marine gamma proteobacterium HTCC2148]
gi|214036989|gb|EEB77658.1| peptidase, T1 family [marine gamma proteobacterium HTCC2148]
Length = 179
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR+ VVI GDGQVS+G TVMK NARKVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTILSVRRGNSVVIGGDGQVSMGNTVMKGNARKVRRLYKDRVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E +L+++ L+R++VELAK WR ++ LR LEA++ +ADK +LVITG GDV+EPE
Sbjct: 63 FELFEAQLDKHQGHLVRAAVELAKAWRTERALRQLEALLAVADKETSLVITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG +A SAARAL+ +T+ A + K ++IA DIC+YTNHN +E L
Sbjct: 123 DNLIAIGSGGPFAQSAARALLDNTELDARSVVEKGLAIAGDICIYTNHNRTIEEL 177
>gi|317401424|gb|EFV82057.1| ATP-dependent protease hslV [Achromobacter xylosoxidans C54]
Length = 179
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K ARK+RRL I+AGFAG++ADAFTL
Sbjct: 3 QFHATTIVCVRRGNRVALGGDGQVTLGNIVIKGTARKIRRLYHDKILAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+++AD TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGNLMRAAVELTRDWRTDRVLRRLEAMLIVADAEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA AL+ +T+ + E I ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELAPETIVKQSLEIAGDLCIYTNQNHVIETL 177
>gi|88705212|ref|ZP_01102923.1| ATP-dependent protease HslV [Congregibacter litoralis KT71]
gi|88700302|gb|EAQ97410.1| ATP-dependent protease HslV [Congregibacter litoralis KT71]
Length = 179
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL VR+ VV+ GDGQVS+G T+MK NARKVRRL K ++AGFAG +ADAFTL
Sbjct: 3 QFRGTTILCVRRGNSVVVGGDGQVSMGNTIMKGNARKVRRLYKDQVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E +LE++ QL+R++VELAK WR ++ LR LEA++ +ADK +LVI+G GDV+EPE
Sbjct: 63 FELFEAQLEKHSGQLVRAAVELAKAWRTERSLRQLEALLAVADKETSLVISGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
N ++AIGSGGS+A +AA AL+ +T+ SA E+ K + IAADIC+YTN +E L
Sbjct: 123 NNLIAIGSGGSFAQAAAMALLDNTELSAREVVEKGLGIAADICIYTNQQRTIEQL 177
>gi|117923335|ref|YP_863952.1| ATP-dependent protease peptidase subunit [Magnetococcus sp. MC-1]
gi|189028451|sp|A0L3K3|HSLV_MAGSM RecName: Full=ATP-dependent protease subunit HslV
gi|117607091|gb|ABK42546.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Magnetococcus sp. MC-1]
Length = 178
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 132/172 (76%), Gaps = 1/172 (0%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTIL+VR+ VV+ GDGQVS+G TV K+NARKVR + G ++AGFAGS+ADAFTL ER
Sbjct: 4 GTTILSVRRGNHVVMGGDGQVSIGNTVAKSNARKVRLMSDGKVLAGFAGSTADAFTLFER 63
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E KL ++ L R++VE+AKDWR D+ LR LEAM+ +AD+ +L+I+G GDVLEPE GV
Sbjct: 64 FEGKLSKHGGNLTRAAVEMAKDWRTDRVLRRLEAMLAVADEHCSLLISGNGDVLEPEEGV 123
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG YALSAARAL+ T + +I ++ +AA+ICV+TN+N+ +E L
Sbjct: 124 IAIGSGGPYALSAARALLRHTSLNPRQIVESSLEVAAEICVFTNNNLTIEEL 175
>gi|157373024|ref|YP_001481013.1| ATP-dependent protease peptidase subunit [Serratia proteamaculans
568]
gi|166918423|sp|A8GL95|HSLV_SERP5 RecName: Full=ATP-dependent protease subunit HslV
gi|157324788|gb|ABV43885.1| 20S proteasome A and B subunits [Serratia proteamaculans 568]
Length = 176
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENSSLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARA++ +T+ SA EI K+++IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARAMLENTELSAREIVDKSLNIAGDICIYTNHFHTIEEL 172
>gi|213853084|ref|ZP_03382616.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. M223]
Length = 171
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/167 (59%), Positives = 130/167 (77%), Gaps = 1/167 (0%)
Query: 20 TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
+VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KL
Sbjct: 1 SVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKL 60
Query: 80 EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGS 139
E + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGS
Sbjct: 61 EMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGS 120
Query: 140 GGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GG YA +AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 GGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 167
>gi|70726662|ref|YP_253576.1| ATP-dependent protease peptidase subunit [Staphylococcus
haemolyticus JCSC1435]
gi|123660048|sp|Q4L5V5|HSLV_STAHJ RecName: Full=ATP-dependent protease subunit HslV
gi|68447386|dbj|BAE04970.1| heat shock protein HslV [Staphylococcus haemolyticus JCSC1435]
Length = 181
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 138/176 (78%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LG Q +MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 6 LHATTIYAVRHNGEAAMAGDGQVTLGEQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 66 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPD 125
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL ++Q SA+E+A +++ +A+DICV+TN NI++ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKRHASQLSAKEMAYESLKVASDICVFTNDNIIVETL 181
>gi|27364752|ref|NP_760280.1| ATP-dependent protease subunit HslV [Vibrio vulnificus CMCP6]
gi|37681199|ref|NP_935808.1| ATP-dependent protease peptidase subunit [Vibrio vulnificus YJ016]
gi|31340167|sp|Q8DCP3|HSLV_VIBVU RecName: Full=ATP-dependent protease subunit HslV
gi|47605633|sp|Q7MH57|HSLV_VIBVY RecName: Full=ATP-dependent protease subunit HslV
gi|27360897|gb|AAO09807.1| ATP-dependent protease hslV [Vibrio vulnificus CMCP6]
gi|37199950|dbj|BAC95779.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio vulnificus
YJ016]
Length = 184
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG+YA +AA AL+ +T+ A EIA KA++IA DICV+TNHN +E L++ E
Sbjct: 122 AIGSGGAYAQAAATALLENTELDAREIAEKALNIAGDICVFTNHNHTIEELEIPAE 177
>gi|33594895|ref|NP_882538.1| ATP-dependent protease peptidase subunit [Bordetella parapertussis
12822]
gi|33599170|ref|NP_886730.1| ATP-dependent protease peptidase subunit [Bordetella bronchiseptica
RB50]
gi|47605656|sp|Q7W215|HSLV_BORPA RecName: Full=ATP-dependent protease subunit HslV
gi|47605659|sp|Q7WQZ3|HSLV_BORBR RecName: Full=ATP-dependent protease subunit HslV
gi|33564971|emb|CAE39918.1| ATP-dependent protease heat shock protein [Bordetella
parapertussis]
gi|33575216|emb|CAE30679.1| ATP-dependent protease heat shock protein [Bordetella
bronchiseptica RB50]
Length = 179
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K ARK+RRL ++AGFAG++ADAFTL
Sbjct: 3 QFHATTIVCVRRGNHVALGGDGQVTLGNIVIKGTARKIRRLYHDKVLAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+++AD TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGHLMRAAVELTRDWRTDRVLRRLEAMLIVADTEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA AL+ +T+ E I ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELPPEAIVKQSLEIAGDLCIYTNQNHVIETL 177
>gi|238786104|ref|ZP_04630060.1| ATP-dependent protease hslV [Yersinia bercovieri ATCC 43970]
gi|238712981|gb|EEQ05037.1| ATP-dependent protease hslV [Yersinia bercovieri ATCC 43970]
Length = 174
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLDNTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|123440505|ref|YP_001004499.1| ATP-dependent protease peptidase subunit [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|238750845|ref|ZP_04612343.1| ATP-dependent protease hslV [Yersinia rohdei ATCC 43380]
gi|166223006|sp|A1JI09|HSLV_YERE8 RecName: Full=ATP-dependent protease subunit HslV
gi|122087466|emb|CAL10247.1| heat shock protein [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|238710989|gb|EEQ03209.1| ATP-dependent protease hslV [Yersinia rohdei ATCC 43380]
Length = 174
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|332532292|ref|ZP_08408172.1| ATP-dependent protease HslV [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038159|gb|EGI74605.1| ATP-dependent protease HslV [Pseudoalteromonas haloplanktis
ANT/505]
Length = 172
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VVI GDGQVSLG TVMK NARKVRRL G +IAGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGDKVVIGGDGQVSLGNTVMKGNARKVRRLYNGKVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L +++VE+AKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLEMHQGNLTKAAVEMAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T SA EI K+++IA +ICV+TN+ +E L
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAREIVEKSLTIAGNICVFTNNFQTIEEL 172
>gi|242241191|ref|YP_002989372.1| ATP-dependent protease peptidase subunit [Dickeya dadantii Ech703]
gi|242133248|gb|ACS87550.1| 20S proteasome A and B subunits [Dickeya dadantii Ech703]
Length = 176
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ SA EI KA+ IA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIVEKALGIAGDICIYTNQFHTIEEL 172
>gi|187476658|ref|YP_784681.1| ATP-dependent protease peptidase subunit [Bordetella avium 197N]
gi|123515064|sp|Q2L1C6|HSLV_BORA1 RecName: Full=ATP-dependent protease subunit HslV
gi|115421244|emb|CAJ47749.1| ATP-dependent protease heat shock protein [Bordetella avium 197N]
Length = 179
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K ARK+RRL ++AGFAG++ADAFTL
Sbjct: 3 QFHATTIVCVRRGNRVALGGDGQVTLGNIVIKGTARKIRRLYHDKVLAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+++AD TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGHLMRAAVELTRDWRTDRVLRRLEAMLIVADAEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA AL+ +T+ E I ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELPPETIVKQSLEIAGDLCIYTNQNHVIETL 177
>gi|239636269|ref|ZP_04677271.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
warneri L37603]
gi|239597624|gb|EEQ80119.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
warneri L37603]
gi|330685681|gb|EGG97322.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
epidermidis VCU121]
Length = 181
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 136/176 (77%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL G ++AGFAGS ADAFTL
Sbjct: 6 LHATTIYAVRHNGGAAMAGDGQVTLGQQVIMKQTARKVRRLYDGKVLAGFAGSVADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 66 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPD 125
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL + Q SAEE+A +++ +A+DICV+TN NI++ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKRHAGQMSAEEMAYESLKVASDICVFTNDNIIVETL 181
>gi|149925903|ref|ZP_01914166.1| ATP-dependent protease peptidase subunit [Limnobacter sp. MED105]
gi|149825191|gb|EDM84402.1| ATP-dependent protease peptidase subunit [Limnobacter sp. MED105]
Length = 187
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG V+K +ARKVRRL I+AGFAG +ADAFTL
Sbjct: 3 QYHGTTILSVRRGKHVALGGDGQVTLGHIVVKGSARKVRRLHHNKILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E +LE++ LLR++VELAK+WR D+ LR LEAM+ +AD+ +L+ITG GDVLEPE
Sbjct: 63 FEHFEAQLEKHQGHLLRAAVELAKEWRTDRMLRRLEAMLAVADENHSLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG+YA SAA+AL+ +T+ EEI +K+++IA ++C+YTN + +E L
Sbjct: 123 QGLVAIGSGGAYAHSAAKALLENTELLPEEIVKKSLTIAGELCIYTNQHHTIEVL 177
>gi|225621069|ref|YP_002722327.1| ATP-dependent protease peptidase subunit [Brachyspira
hyodysenteriae WA1]
gi|225215889|gb|ACN84623.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Brachyspira hyodysenteriae WA1]
Length = 182
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI V +DGV IAGDGQV+LG+TVMK NA K+R+L G +I+GFAGS+ADAFTL
Sbjct: 8 FKGTTICAVCRDGVTAIAGDGQVTLGETVMKPNAVKLRKLYGGKVISGFAGSTADAFTLF 67
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ EK+L+++ L R++VELA++WR DK LRNL+A+I++A K L+++G GDV+E EN
Sbjct: 68 EKFEKRLQEFSGDLTRAAVELAREWRTDKMLRNLQALIIVASKEKMLLLSGNGDVIESEN 127
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
++AIGSGG YA +AA AL +T SA+EIARK++ IA+ IC+YTN NI LE ++
Sbjct: 128 NILAIGSGGQYAKAAAMALSENTDLSAKEIARKSLEIASKICIYTNSNISLEVIE 182
>gi|311086300|gb|ADP66382.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
LL01 (Acyrthosiphon pisum)]
gi|311086874|gb|ADP66955.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
TLW03 (Acyrthosiphon pisum)]
gi|311087464|gb|ADP67544.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
JF99 (Acyrthosiphon pisum)]
gi|311087949|gb|ADP68028.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
JF98 (Acyrthosiphon pisum)]
Length = 176
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR VVI GDGQ +LG T+MK+N +K+R L +IAGFAG +ADAFTL E
Sbjct: 2 TTILSVRLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
+KKL Y QL R+++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE+ ++
Sbjct: 62 DKKLAMYQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPEDDLI 121
Query: 136 AIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGGSYA S+ARAL+ N A +I RK+++IAA+IC+YTNHN ++ L
Sbjct: 122 AIGSGGSYAQSSARALIENTNLDANQIVRKSLNIAANICIYTNHNFTIKEL 172
>gi|242373544|ref|ZP_04819118.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
epidermidis M23864:W1]
gi|242348907|gb|EES40509.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
epidermidis M23864:W1]
Length = 180
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 138/176 (78%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 5 LHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ +K LV++G G+V+ P+
Sbjct: 65 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMNKDAILVVSGTGEVIAPD 124
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL ++Q SA+E+A +++ +AADICV+TN NI++ETL
Sbjct: 125 DDLIAIGSGGNYALSAGRALKRHASQLSAKEMAYESLKVAADICVFTNDNIIVETL 180
>gi|85711523|ref|ZP_01042581.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Idiomarina
baltica OS145]
gi|85694675|gb|EAQ32615.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Idiomarina
baltica OS145]
Length = 197
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/163 (60%), Positives = 128/163 (78%), Gaps = 1/163 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ V I GDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 18 TTIVSVRRGDKVAIGGDGQVSLGNTVMKGNAKKVRRLYHDQVLAGFAGGTADAFTLFERF 77
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLEQ+ L+R++VELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PEN ++
Sbjct: 78 ESKLEQHQGNLMRAAVELAKDWRTDRALRRLEALLAVADKETSLIITGNGDVVQPENDLI 137
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTN 177
AIGSGG YA +AA A++ +T+ SA +I KA++IA DICVYTN
Sbjct: 138 AIGSGGPYAQAAATAMLETTELSARDIVEKALTIAGDICVYTN 180
>gi|21674018|ref|NP_662083.1| ATP-dependent protease peptidase subunit [Chlorobium tepidum TLS]
gi|25008570|sp|Q8KD62|HSLV_CHLTE RecName: Full=ATP-dependent protease subunit HslV
gi|21647166|gb|AAM72425.1| heat shock protein HslV [Chlorobium tepidum TLS]
Length = 181
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT++ + +DG + DGQ++LG TVMK + RK+R L +G I GFAG++ADA TL
Sbjct: 7 QIRSTTVIGIIRDGKAALGSDGQMTLGNTVMKHSTRKIRSLYQGRFITGFAGATADALTL 66
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE Y +L R++VELAKDWR DKYLR LEAM+ + L+I+G GDV+EPE
Sbjct: 67 LDRFESKLEAYSGKLDRAAVELAKDWRTDKYLRRLEAMLAVVSTDKALIISGTGDVIEPE 126
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSG YAL+AAR+LM T SAEEI R+++ IAADIC+YTN +IV+ETL
Sbjct: 127 DGIVAIGSGSMYALAAARSLMKHTTLSAEEIVRESLQIAADICIYTNDHIVIETL 181
>gi|270265176|ref|ZP_06193438.1| ATP-dependent protease hslV [Serratia odorifera 4Rx13]
gi|270040810|gb|EFA13912.1| ATP-dependent protease hslV [Serratia odorifera 4Rx13]
Length = 176
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADEHSSLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARA++ +T+ SA EI K+++IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARAMLENTELSAREIVDKSLNIAGDICIYTNHFHTIEEL 172
>gi|77361645|ref|YP_341220.1| ATP-dependent protease peptidase subunit [Pseudoalteromonas
haloplanktis TAC125]
gi|76876556|emb|CAI87778.1| peptidase component of the HslUV protease [Pseudoalteromonas
haloplanktis TAC125]
Length = 172
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VVI GDGQVSLG TVMK NARKVRRL G +IAGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGNNVVIGGDGQVSLGNTVMKGNARKVRRLYNGKVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L +++VE+AKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLEMHQGNLTKAAVEMAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T SA EI K+++IA +ICV+TN +E L
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAREIVEKSLTIAGNICVFTNDFQTIEEL 172
>gi|152976196|ref|YP_001375713.1| ATP-dependent protease peptidase subunit [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|189043929|sp|A7GRG0|HSLV_BACCN RecName: Full=ATP-dependent protease subunit HslV
gi|152024948|gb|ABS22718.1| 20S proteasome A and B subunits [Bacillus cytotoxicus NVH 391-98]
Length = 180
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/177 (55%), Positives = 131/177 (74%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI + +G +AGDGQV+ G V MK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAIHHNGKCAMAGDGQVTFGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ D+T L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDETTLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG YAL+A RAL S +A+EIA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGHYALAAGRALKRHASEHLTAKEIAKASLEIAGDICVYTNHNIIVEEL 180
>gi|312143682|ref|YP_003995128.1| 20S proteasome A and B subunits [Halanaerobium sp. 'sapolanicus']
gi|311904333|gb|ADQ14774.1| 20S proteasome A and B subunits [Halanaerobium sp. 'sapolanicus']
Length = 189
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 134/181 (74%), Gaps = 2/181 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ ATTI+ VR + + +AGDGQV+LG TVMK+ A+KVRRL G I+AGFAG+SADAFT
Sbjct: 4 TEFEATTIVAVRHNNCMALAGDGQVTLGNTVMKSTAKKVRRLYNGEILAGFAGTSADAFT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KLE+Y L R++VELAK+WR DK LR LEA++++A+ L+I+G GDV+EP
Sbjct: 64 LFEKFEAKLEEYHGSLQRAAVELAKEWRTDKILRKLEALLIVANLEEILIISGNGDVIEP 123
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+ + AIGSGG YA +AA AL + N SA +IAR+A+ IAA IC+YTN NI LE L G
Sbjct: 124 DANISAIGSGGPYARAAASALSNHGNDLSAGDIAREALQIAASICIYTNENITLEELDGG 183
Query: 189 D 189
+
Sbjct: 184 E 184
>gi|260595966|ref|YP_003208537.1| ATP-dependent protease subunit HslV [Cronobacter turicensis z3032]
gi|260215143|emb|CBA26939.1| ATP-dependent protease hslV [Cronobacter turicensis z3032]
Length = 176
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A +I K++ IA DIC+YTNH + +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGARDIVEKSLGIAGDICIYTNHFLTIEEL 172
>gi|146329277|ref|YP_001210212.1| ATP-dependent protease peptidase subunit [Dichelobacter nodosus
VCS1703A]
gi|189028446|sp|A5EX24|HSLV_DICNV RecName: Full=ATP-dependent protease subunit HslV
gi|146232747|gb|ABQ13725.1| heat shock protein HslVU, protease HslV [Dichelobacter nodosus
VCS1703A]
Length = 180
Score = 204 bits (520), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H+TTIL+VR+ V IAGDGQVSLGQT+MK NARK+RRL I+AGFAG++ADAFTL E
Sbjct: 5 HSTTILSVRRGNHVAIAGDGQVSLGQTIMKGNARKIRRLYHDQILAGFAGATADAFTLFE 64
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
E KLE QLLR++VE+AK+WR D+ LR LEAM+++AD+ TL+++G GD++EPEN
Sbjct: 65 LFEGKLEAQDGQLLRAAVEMAKEWRTDRSLRRLEAMLIVADRNNTLILSGNGDIVEPENS 124
Query: 134 VMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ AIGSGG +A +T+ A IA K+++IAADIC+YTNHNIV + LK
Sbjct: 125 LAAIGSGGMYALAAARALYHNTEMDALSIAEKSLNIAADICIYTNHNIVSDELK 178
>gi|223044218|ref|ZP_03614255.1| ATP-dependent protease HslV [Staphylococcus capitis SK14]
gi|222442368|gb|EEE48476.1| ATP-dependent protease HslV [Staphylococcus capitis SK14]
Length = 180
Score = 204 bits (520), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 138/176 (78%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 5 LHATTIYAVRHNGDAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ +K LV++G G+V+ P+
Sbjct: 65 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMNKDAILVVSGTGEVIAPD 124
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL ++Q SA+E+A +++ +AADICV+TN NI++ETL
Sbjct: 125 DDLIAIGSGGNYALSAGRALKRHASQLSAKEMAYESLKVAADICVFTNDNIIVETL 180
>gi|254759318|ref|ZP_05211343.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
Australia 94]
Length = 180
Score = 204 bits (519), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G V MK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA AL S +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGCALKQYASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 180
>gi|251787765|ref|YP_003002486.1| ATP-dependent protease peptidase subunit [Dickeya zeae Ech1591]
gi|271502449|ref|YP_003335475.1| 20S proteasome A and subunit Bs [Dickeya dadantii Ech586]
gi|307128949|ref|YP_003880965.1| peptidase component of the HslUV protease [Dickeya dadantii 3937]
gi|247536386|gb|ACT05007.1| 20S proteasome A and B subunits [Dickeya zeae Ech1591]
gi|270346004|gb|ACZ78769.1| 20S proteasome A and B subunits [Dickeya dadantii Ech586]
gi|306526478|gb|ADM96408.1| peptidase component of the HslUV protease [Dickeya dadantii 3937]
Length = 176
Score = 204 bits (519), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ SA EI K++ IA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIVEKSLGIAGDICIYTNQFHTIEEL 172
>gi|228965512|ref|NP_240381.2| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
APS (Acyrthosiphon pisum)]
gi|11132902|sp|P57115|HSLV_BUCAI RecName: Full=ATP-dependent protease subunit HslV
Length = 176
Score = 204 bits (519), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR VVI GDGQ +LG T+MK+N +K+R L +IAGFAG +ADAFTL E
Sbjct: 2 TTILSVRLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
+KKL Y QL R+++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE+ ++
Sbjct: 62 DKKLAMYQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGGSYA S+ARAL+ +T A +I RK+++IAA+IC+YTNHN ++ L
Sbjct: 122 AIGSGGSYAQSSARALIENTHLDANQIVRKSLNIAANICIYTNHNFTIKEL 172
>gi|288818588|ref|YP_003432936.1| ATP-dependent protease [Hydrogenobacter thermophilus TK-6]
gi|288787988|dbj|BAI69735.1| ATP-dependent protease [Hydrogenobacter thermophilus TK-6]
gi|308752179|gb|ADO45662.1| 20S proteasome A and B subunits [Hydrogenobacter thermophilus TK-6]
Length = 177
Score = 204 bits (519), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 131/172 (76%), Gaps = 1/172 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H+TTIL VR+D VI GDGQV+LG +V+K A+K+R+L ++ GFAGS+AD L+
Sbjct: 3 LHSTTILAVRRDNTTVIGGDGQVTLGHSVIKHGAKKIRKLYNDRVLVGFAGSAADGLALM 62
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++ L+R+ VELAK+WRMDKYLR LEAM+L+ DK L+++G GDV+EP+
Sbjct: 63 ERLEAKLEEFRGNLVRACVELAKEWRMDKYLRRLEAMLLVVDKDNMLLLSGNGDVIEPDE 122
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLE 183
V+AIGSGG +A SAA AL N SAEEI ++A+ IA++IC+YTN N V+E
Sbjct: 123 PVIAIGSGGDFARSAALALYRHTNMSAEEIVKEALKIASEICIYTNSNFVIE 174
>gi|283957996|ref|ZP_06375447.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus A017934/97]
gi|283790145|gb|EFC28962.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus A017934/97]
Length = 181
Score = 204 bits (519), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 136/176 (77%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR + +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 6 LHATTIYAVRHNRKAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 66 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPD 125
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL ++ SAEE+A +++ +AADICV+TN NIV+ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKRHASHLSAEEMAYESLKVAADICVFTNDNIVVETL 181
>gi|325272526|ref|ZP_08138898.1| ATP-dependent protease subunit HslV [Pseudomonas sp. TJI-51]
gi|324102336|gb|EGB99810.1| ATP-dependent protease subunit HslV [Pseudomonas sp. TJI-51]
Length = 176
Score = 204 bits (518), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 141/175 (80%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EGQLEKHQGHLIRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+GSGG+YA +AARAL++ T SA EIA A++IA DICV+TNHN+ +E + D
Sbjct: 122 AMGSGGAYAQAAARALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAD 176
>gi|33594013|ref|NP_881657.1| ATP-dependent protease peptidase subunit [Bordetella pertussis
Tohama I]
gi|47605654|sp|Q7VUK0|HSLV_BORPE RecName: Full=ATP-dependent protease subunit HslV
gi|33564087|emb|CAE43355.1| ATP-dependent protease heat shock protein [Bordetella pertussis
Tohama I]
gi|332383430|gb|AEE68277.1| ATP-dependent protease peptidase subunit [Bordetella pertussis CS]
Length = 179
Score = 204 bits (518), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K RK+RRL ++AGFAG++ADAFTL
Sbjct: 3 QFHATTIVCVRRGNHVALGGDGQVTLGNIVIKGTVRKIRRLYHDKVLAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+++AD TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGHLMRAAVELTRDWRTDRVLRRLEAMLIVADTEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA AL+ +T+ E I ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELPPEAIVKQSLEIAGDLCIYTNQNHVIETL 177
>gi|330858961|emb|CBX69323.1| ATP-dependent protease hslV [Yersinia enterocolitica W22703]
Length = 174
Score = 204 bits (518), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL IIAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNDKIIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAA AL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAAHALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|302812404|ref|XP_002987889.1| hypothetical protein SELMODRAFT_127041 [Selaginella moellendorffii]
gi|300144278|gb|EFJ10963.1| hypothetical protein SELMODRAFT_127041 [Selaginella moellendorffii]
Length = 201
Score = 204 bits (518), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 140/177 (79%), Gaps = 3/177 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA-GSSADAFTL 71
M TT+L +RK+ VVI GDGQV++G ++K N RKVRR+G+ N+I GFA G++ADAFTL
Sbjct: 1 MIGTTVLCIRKNDSVVIIGDGQVTMGAEILKPNVRKVRRIGE-NVIGGFAAGATADAFTL 59
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERLE KLE++P L R++VELAK WR DK+LR L+A++++AD I+L ITG GDVLEP
Sbjct: 60 FERLETKLEEHPGLLTRAAVELAKAWRTDKFLRRLDALMVVADAEISLTITGTGDVLEPY 119
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKV 187
+G++ IGSGGSYA +AARALM + AE+IARKAM IAAD C+YTNHN LET+KV
Sbjct: 120 DGIVGIGSGGSYASAAARALMDLPDMDAEKIARKAMKIAADCCIYTNHNFTLETIKV 176
>gi|26991677|ref|NP_747102.1| ATP-dependent protease peptidase subunit [Pseudomonas putida
KT2440]
gi|228925262|ref|YP_001671270.2| ATP-dependent protease peptidase subunit [Pseudomonas putida GB-1]
gi|229328216|ref|YP_001270178.2| ATP-dependent protease peptidase subunit [Pseudomonas putida F1]
gi|34222531|sp|Q88D28|HSLV_PSEPK RecName: Full=ATP-dependent protease subunit HslV
gi|24986776|gb|AAN70566.1|AE016699_7 heat shock protein HslV [Pseudomonas putida KT2440]
Length = 176
Score = 204 bits (518), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 141/175 (80%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+GSGG+YA +AARAL++ T SA EIA A++IA DICV+TNHN+ +E + D
Sbjct: 122 AMGSGGAYAQAAARALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAD 176
>gi|220904717|ref|YP_002480029.1| ATP-dependent protease peptidase subunit [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|254802409|sp|B8J0S4|HSLV_DESDA RecName: Full=ATP-dependent protease subunit HslV
gi|219869016|gb|ACL49351.1| 20S proteasome A and B subunits [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 177
Score = 204 bits (518), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 139/177 (78%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
++ HATTIL VRKDG+V +AGDGQV++GQT +MK A+KVRRL G I+AGFAG++ADAF
Sbjct: 1 METHATTILAVRKDGIVALAGDGQVTMGQTMIMKHAAQKVRRLHDGKILAGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E E KL++ ++R++VE+ KDWR DKYLR LEAM+L+AD+ LV++G GDV+E
Sbjct: 61 TLFELFESKLKEVRGHMVRAAVEMTKDWRKDKYLRKLEAMLLLADREHILVLSGTGDVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ V AIGSGG YAL+AARAL AE IAR++M IAA+ICVYTN ++ LETL
Sbjct: 121 PDDNVAAIGSGGPYALAAARALSRHSGLDAETIARESMRIAAEICVYTNDHVTLETL 177
>gi|320539525|ref|ZP_08039192.1| peptidase component of the HslUV protease [Serratia symbiotica str.
Tucson]
gi|320030378|gb|EFW12390.1| peptidase component of the HslUV protease [Serratia symbiotica str.
Tucson]
Length = 199
Score = 203 bits (517), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 25 TTIVSVRRHGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 84
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 85 EQKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADEHASLIITGNGDVIQPENDLI 144
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ +A EI K++ IA DIC+YTNH +E L
Sbjct: 145 AIGSGGPYAQAAARALLENTELNAREIVDKSLGIAGDICIYTNHFHTIEEL 195
>gi|238028911|ref|YP_002913142.1| ATP-dependent protease peptidase subunit [Burkholderia glumae BGR1]
gi|237878105|gb|ACR30438.1| 20S proteasome, A and B subunits [Burkholderia glumae BGR1]
Length = 178
Score = 203 bits (517), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QYHGTTIVSVRRGDQVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ ADKT TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADKTTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T+ S +EI KA++IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGSYAQAAARALAENTELSPQEIVAKALTIAGDMCIYTNHNHIIETIE 178
>gi|56419748|ref|YP_147066.1| ATP-dependent protease peptidase subunit [Geobacillus kaustophilus
HTA426]
gi|261419413|ref|YP_003253095.1| ATP-dependent protease peptidase subunit [Geobacillus sp. Y412MC61]
gi|297530612|ref|YP_003671887.1| 20S proteasome A and subunit betas [Geobacillus sp. C56-T3]
gi|319766228|ref|YP_004131729.1| 20S proteasome A and B subunits [Geobacillus sp. Y412MC52]
gi|81347625|sp|Q5L0N2|HSLV_GEOKA RecName: Full=ATP-dependent protease subunit HslV
gi|56379590|dbj|BAD75498.1| proteasome Clp protease subunit [Geobacillus kaustophilus HTA426]
gi|261375870|gb|ACX78613.1| 20S proteasome A and B subunits [Geobacillus sp. Y412MC61]
gi|297253864|gb|ADI27310.1| 20S proteasome A and B subunits [Geobacillus sp. C56-T3]
gi|317111094|gb|ADU93586.1| 20S proteasome A and B subunits [Geobacillus sp. Y412MC52]
Length = 180
Score = 203 bits (517), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 132/177 (74%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI +R +G +AGDGQV+ G V MK A+KVRRL +GN++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAIRHNGASAMAGDGQVTFGNAVVMKHTAKKVRRLFQGNVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLEQ+ L R++VELAK+WR DK LR LEAM+++ DK L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEQWNGNLPRAAVELAKEWRSDKVLRRLEAMLIVMDKQHLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG YAL+A RAL +A+EIA+ A+ IAADICVYTN +I++E L
Sbjct: 124 DGMLAIGSGGQYALAAGRALKKYAGGSMTAKEIAKAALEIAADICVYTNGHIIVEEL 180
>gi|148514134|gb|ABQ80994.1| 20S proteasome, A and B subunits [Pseudomonas putida F1]
gi|166862527|gb|ABZ00935.1| 20S proteasome A and B subunits [Pseudomonas putida GB-1]
Length = 192
Score = 203 bits (517), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 141/175 (80%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 18 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVIAGFAGATADAFTLFERF 77
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 78 EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 137
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+GSGG+YA +AARAL++ T SA EIA A++IA DICV+TNHN+ +E + D
Sbjct: 138 AMGSGGAYAQAAARALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAD 192
>gi|260772032|ref|ZP_05880949.1| ATP-dependent protease HslV [Vibrio metschnikovii CIP 69.14]
gi|260612899|gb|EEX38101.1| ATP-dependent protease HslV [Vibrio metschnikovii CIP 69.14]
Length = 184
Score = 203 bits (517), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 138/173 (79%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+D VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRDNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETTSLIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG+YA +AA AL+ +TQ A EIA KA++IA +ICV+TNH+ +E L++
Sbjct: 122 AIGSGGNYAQAAALALLENTQLDAREIAEKALNIAGNICVFTNHHHTIEELEI 174
>gi|261855922|ref|YP_003263205.1| 20S proteasome A and subunit betas [Halothiobacillus neapolitanus
c2]
gi|261836391|gb|ACX96158.1| 20S proteasome A and B subunits [Halothiobacillus neapolitanus c2]
Length = 179
Score = 203 bits (517), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 137/177 (77%), Gaps = 5/177 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTIL VRK+G VI GDGQV+LG TV+K NARKVRRL G+++AGFAG++ADAFTL
Sbjct: 3 NFRGTTILCVRKNGQTVIGGDGQVTLGNTVVKGNARKVRRLYNGDVLAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE++ LLRS+VELAK+WR D+ +R LEAM+++AD+T L I+G GDV+EPE
Sbjct: 63 FEKFEAKLEKFGGNLLRSAVELAKEWRTDRAMRRLEAMLVVADRTHMLTISGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
++AIGSGG++A +AA ALM Q+SA E IA A++IA DIC+YTNHN+ +E L
Sbjct: 123 TDLIAIGSGGAFAQAAATALM--QHSALEARAIAEAALNIAGDICIYTNHNLTIEVL 177
>gi|296126032|ref|YP_003633284.1| 20S proteasome A and B subunits [Brachyspira murdochii DSM 12563]
gi|296017848|gb|ADG71085.1| 20S proteasome A and B subunits [Brachyspira murdochii DSM 12563]
Length = 176
Score = 203 bits (517), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI V ++G+ IAGDGQV+LG+TVMK NA K+R+L G +I+GFAGS+ADAFTL
Sbjct: 2 FKGTTICAVCRNGITAIAGDGQVTLGETVMKPNAVKLRKLYGGKVISGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ EK+L+++ L R++VELA++WR DK LRNL+A+I++A K L+++G GDV+E EN
Sbjct: 62 EKFEKRLQEFSGDLTRAAVELAREWRTDKMLRNLQALIIVASKDKMLLLSGNGDVIESEN 121
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
++AIGSGG YA +AA AL +T SA+EIA+KA+ IA+ IC+YTN NI LE ++
Sbjct: 122 NILAIGSGGQYAKAAAMALCENTDLSAKEIAKKALEIASQICIYTNSNISLEVIE 176
>gi|193212785|ref|YP_001998738.1| ATP-dependent protease peptidase subunit [Chlorobaculum parvum NCIB
8327]
gi|238692641|sp|B3QNN5|HSLV_CHLP8 RecName: Full=ATP-dependent protease subunit HslV
gi|193086262|gb|ACF11538.1| 20S proteasome A and B subunits [Chlorobaculum parvum NCIB 8327]
Length = 181
Score = 203 bits (517), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 131/175 (74%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT+L V +DG + DGQ++LG TVMK + RK+R L +G + GFAG++ADA TL
Sbjct: 7 QIRSTTVLGVLRDGKAALGSDGQMTLGNTVMKHSTRKIRSLYQGKFVTGFAGATADALTL 66
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LER E KLE Y +L R++VELAKDWR DKYLR LEAM+ + L+I+G GDV+EPE
Sbjct: 67 LERFEAKLEAYSGRLDRAAVELAKDWRTDKYLRRLEAMLAVVSSDKALIISGTGDVIEPE 126
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSG YAL+AARALM T SAEEI R+++ AA+IC+YTN +I +ETL
Sbjct: 127 DGIVAIGSGSMYALAAARALMKHTTLSAEEIVRESLQTAAEICIYTNDHIAIETL 181
>gi|314933432|ref|ZP_07840797.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
caprae C87]
gi|313653582|gb|EFS17339.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
caprae C87]
Length = 180
Score = 203 bits (517), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 138/176 (78%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 5 LHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ +K LV++G G+V+ P+
Sbjct: 65 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMNKDAILVVSGTGEVIAPD 124
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL ++Q SA+++A +++ +AADICV+TN NI++ETL
Sbjct: 125 DDLIAIGSGGNYALSAGRALKRHASQLSAKDMAYESLKVAADICVFTNDNIIVETL 180
>gi|27467847|ref|NP_764484.1| ATP-dependent protease peptidase subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57866719|ref|YP_188401.1| ATP-dependent protease peptidase subunit [Staphylococcus
epidermidis RP62A]
gi|251810684|ref|ZP_04825157.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
epidermidis BCM-HMP0060]
gi|282876315|ref|ZP_06285182.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
epidermidis SK135]
gi|293366783|ref|ZP_06613459.1| heat shock protein HslVU [Staphylococcus epidermidis
M23864:W2(grey)]
gi|38258090|sp|Q8CPH1|HSLV_STAES RecName: Full=ATP-dependent protease subunit HslV
gi|71152140|sp|Q5HPT9|HSLV_STAEQ RecName: Full=ATP-dependent protease subunit HslV
gi|27315392|gb|AAO04526.1|AE016747_23 heat shock protein HslV [Staphylococcus epidermidis ATCC 12228]
gi|57637377|gb|AAW54165.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
epidermidis RP62A]
gi|251805844|gb|EES58501.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295340|gb|EFA87867.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
epidermidis SK135]
gi|291319084|gb|EFE59454.1| heat shock protein HslVU [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329724353|gb|EGG60865.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
epidermidis VCU144]
gi|329736215|gb|EGG72487.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
epidermidis VCU028]
gi|329736581|gb|EGG72847.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
epidermidis VCU045]
Length = 180
Score = 203 bits (517), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 136/176 (77%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 5 LHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ +K L+++G G+V+ P+
Sbjct: 65 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMNKDAILIVSGTGEVIAPD 124
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL + Q SA E+A +++ +AADICV+TN NI++ETL
Sbjct: 125 DDLIAIGSGGNYALSAGRALKRHAAQLSASEMAYESLKVAADICVFTNDNIIVETL 180
>gi|28872253|ref|NP_794872.1| heat shock protein HslV [Pseudomonas syringae pv. tomato str.
DC3000]
gi|301382645|ref|ZP_07231063.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
tomato Max13]
gi|302060629|ref|ZP_07252170.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
tomato K40]
gi|302132700|ref|ZP_07258690.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|38257952|sp|Q87V01|HSLV_PSESM RecName: Full=ATP-dependent protease subunit HslV
gi|28855507|gb|AAO58567.1| heat shock protein HslV [Pseudomonas syringae pv. tomato str.
DC3000]
gi|330877950|gb|EGH12099.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330964751|gb|EGH65011.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|331016039|gb|EGH96095.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 176
Score = 203 bits (516), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E + D
Sbjct: 122 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEEQDLAD 176
>gi|253573513|ref|ZP_04850856.1| 20S proteasome A and B [Paenibacillus sp. oral taxon 786 str. D14]
gi|251847041|gb|EES75046.1| 20S proteasome A and B [Paenibacillus sp. oral taxon 786 str. D14]
Length = 180
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 138/178 (77%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+ HATTI VR +G IAGDGQV+ GQ V MK A+KVRRL +G ++AGFAGS ADA
Sbjct: 3 LSFHATTICAVRHNGKGAIAGDGQVTFGQNVVMKQTAKKVRRLYRGQVVAGFAGSVADAI 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE++ L R++VELAKDWR D+ LR LEA++++ DKT L+I+G G+++E
Sbjct: 63 TLFEKFEGKLEEHSGNLQRAAVELAKDWRQDRVLRKLEALMIVMDKTGMLLISGGGEIIE 122
Query: 130 PENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ V+AIGSGG++ALSAARAL +T A++IAR+++ IA++ICVYTN+NI++E L
Sbjct: 123 PDDDVLAIGSGGNFALSAARALKRHATGLEAKDIARESLQIASEICVYTNNNIIVEEL 180
>gi|213584972|ref|ZP_03366798.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E98-0664]
Length = 169
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/165 (59%), Positives = 128/165 (77%), Gaps = 1/165 (0%)
Query: 22 RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
R++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE
Sbjct: 1 RRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEM 60
Query: 82 YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
+ L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG
Sbjct: 61 HQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGG 120
Query: 142 SYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
YA +AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 PYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 165
>gi|21672817|ref|NP_660884.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
Sg (Schizaphis graminum)]
gi|25008568|sp|Q8K906|HSLV_BUCAP RecName: Full=ATP-dependent protease subunit HslV
gi|21623469|gb|AAM68095.1| heat shock protein HslV [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 176
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR VVI GDGQ +LG T+MK+N +K+R L +IAGFAG +ADAFTL E
Sbjct: 2 TTILSVRLKNKVVIGGDGQATLGNTIMKSNVKKIRTLYHEKVIAGFAGGTADAFTLFEMF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKL Y QL R+++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE+ ++
Sbjct: 62 EKKLAMYQGQLPRAAIELAKDWRSDRMLRKLEALLAVADKDTSLIITGNGDVIQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGGSYA SAARAL+ +T +A+EI K+++IAA+IC+YTNH+ ++ L
Sbjct: 122 AIGSGGSYAQSAARALINNTTLNADEIVEKSLNIAANICIYTNHSFTIKEL 172
>gi|258620454|ref|ZP_05715492.1| ATP-dependent protease HslV [Vibrio mimicus VM573]
gi|258625667|ref|ZP_05720546.1| ATP-dependent protease HslV [Vibrio mimicus VM603]
gi|258581905|gb|EEW06775.1| ATP-dependent protease HslV [Vibrio mimicus VM603]
gi|258587333|gb|EEW12044.1| ATP-dependent protease HslV [Vibrio mimicus VM573]
Length = 177
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 131/168 (77%), Gaps = 1/168 (0%)
Query: 21 VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
+R++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER E KL+
Sbjct: 1 MRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQ 60
Query: 81 QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSG 140
+ L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE+ ++AIGSG
Sbjct: 61 MHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLIAIGSG 120
Query: 141 GSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
G+YA +AA AL+ +T A IA KA++IA DICV+TNHN +E L++
Sbjct: 121 GNYAQAAAIALLENTDLDARTIAEKALNIAGDICVFTNHNHTIEELEI 168
>gi|82539122|ref|XP_723974.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23478455|gb|EAA15539.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 200
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 130/176 (73%), Gaps = 9/176 (5%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H TTIL + GDG VS G ++K NA+K+RRL K NI+ GFAG++AD FT
Sbjct: 33 IPRHGTTIL-------CCLIGDGMVSQGTMIVKGNAKKIRRL-KDNILMGFAGATADCFT 84
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LL++ E K+++YPNQLLRS VELAK WR D+YLR+LEA++++ADK L +TG GDVLEP
Sbjct: 85 LLDKFETKIDEYPNQLLRSCVELAKLWRTDRYLRHLEAVLIVADKDTLLEVTGNGDVLEP 144
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ GSGG YA++AARAL +N SA++IA KAM+IAAD+C +TNHN + ETL
Sbjct: 145 SGNVLGTGSGGPYAMAAARALYDIENLSAKDIAYKAMNIAADMCCHTNHNFICETL 200
>gi|213969434|ref|ZP_03397571.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
tomato T1]
gi|213925805|gb|EEB59363.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
tomato T1]
Length = 192
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 18 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 77
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 78 EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 137
Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E + D
Sbjct: 138 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEEQDLAD 192
>gi|332703814|ref|ZP_08423902.1| ATP-dependent protease hslV [Desulfovibrio africanus str. Walvis
Bay]
gi|332553963|gb|EGJ51007.1| ATP-dependent protease hslV [Desulfovibrio africanus str. Walvis
Bay]
Length = 178
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 140/178 (78%), Gaps = 2/178 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
MHATTIL V D V +AGDGQV+LGQ TVMK ARKVRR+ K +I+ GFAGS+ADAFTL
Sbjct: 1 MHATTILAVLDDRGVAMAGDGQVTLGQQTVMKHTARKVRRIYKESILVGFAGSTADAFTL 60
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LER E KLEQ+ L R+SVELAK+WR DKYLR LEAM+L +D T L+++G GDV+EP+
Sbjct: 61 LERFEAKLEQFKGNLPRASVELAKEWRTDKYLRRLEAMLLASDGTQILLLSGNGDVIEPD 120
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+G+ AIGSGGSYAL+AARAL T +A EI ++M+IAA+ICV+TN +V+ET+ G
Sbjct: 121 DGMAAIGSGGSYALAAARALKRHTGMAAREICERSMAIAAEICVFTNDKLVVETIDKG 178
>gi|228992558|ref|ZP_04152485.1| ATP-dependent protease hslV [Bacillus pseudomycoides DSM 12442]
gi|228998606|ref|ZP_04158193.1| ATP-dependent protease hslV [Bacillus mycoides Rock3-17]
gi|229006106|ref|ZP_04163794.1| ATP-dependent protease hslV [Bacillus mycoides Rock1-4]
gi|228755182|gb|EEM04539.1| ATP-dependent protease hslV [Bacillus mycoides Rock1-4]
gi|228761074|gb|EEM10033.1| ATP-dependent protease hslV [Bacillus mycoides Rock3-17]
gi|228767192|gb|EEM15828.1| ATP-dependent protease hslV [Bacillus pseudomycoides DSM 12442]
Length = 180
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 130/177 (73%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI + +G +AGDGQV+ G V MK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAIHHNGECAMAGDGQVTFGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ D+T L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDQTTLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG YAL+A RAL S +A+ IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGHYALAAGRALKQHASEHLTAKAIAKASLEIAGDICVYTNHNIIVEEL 180
>gi|313673478|ref|YP_004051589.1| hslv component of hsluv peptidase [Calditerrivibrio nitroreducens
DSM 19672]
gi|312940234|gb|ADR19426.1| HslV component of HslUV peptidase [Calditerrivibrio nitroreducens
DSM 19672]
Length = 175
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 127/172 (73%), Gaps = 1/172 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT++ V+ + I DGQV+ G TV+K NA+K+RRL G I+ GFAGS+ADAFTL+
Sbjct: 2 FEGTTVICVKTNDKTAIGADGQVTFGHTVLKNNAKKIRRLYNGEIVCGFAGSTADAFTLI 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER EKKL ++ QLLRS VELAKDWR DKYL++LEAM++ A+K +ITG GDV+EP++
Sbjct: 62 ERFEKKLNEHGGQLLRSCVELAKDWRTDKYLKSLEAMMIAANKDSMYIITGNGDVVEPQH 121
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLE 183
G+ AIGSGG YA +AA AL + + A EI +KA+ IA +IC+YTN I++E
Sbjct: 122 GIAAIGSGGPYAFAAAYALKNNTDLDATEIVKKALDIAGEICIYTNKEIIVE 173
>gi|91794709|ref|YP_564360.1| ATP-dependent protease peptidase subunit [Shewanella denitrificans
OS217]
gi|122968445|sp|Q12IT9|HSLV_SHEDO RecName: Full=ATP-dependent protease subunit HslV
gi|91716711|gb|ABE56637.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella denitrificans OS217]
Length = 174
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + LL+S+VELAKDWR DK LR LEAM+++AD +L+ITG GDV++PE+ ++
Sbjct: 62 EAKLEMHQGHLLKSAVELAKDWRTDKMLRKLEAMLVVADTEASLIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+Y +A L +T+ SA+EIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSAQEIADKSLTIAGDICVFTNQFKTIEQL 172
>gi|292492405|ref|YP_003527844.1| 20S proteasome A and subunit betas [Nitrosococcus halophilus Nc4]
gi|291581000|gb|ADE15457.1| 20S proteasome A and B subunits [Nitrosococcus halophilus Nc4]
Length = 179
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 130/175 (74%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR+ VV+ GDGQVS+ VMK NARKVRRL G ++AGFAG +ADAFTL
Sbjct: 3 QFRGTTILSVRRQEQVVMGGDGQVSMNDIVMKGNARKVRRLFHGQVVAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L R++VELAKDWR D+ LR LEA++ +A+ + +I+G GDV+EPE
Sbjct: 63 FERFEAKLEKHQGNLTRAAVELAKDWRSDRSLRRLEALLAVANPKASYIISGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG YA +AARAL+ +T SA I KA++IAADIC+YTN + +E L
Sbjct: 123 YGLIAIGSGGPYAQAAARALLENTDLSARAITEKALNIAADICIYTNSYLTIEEL 177
>gi|198284454|ref|YP_002220775.1| ATP-dependent protease peptidase subunit [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|198248975|gb|ACH84568.1| 20S proteasome A and B subunits [Acidithiobacillus ferrooxidans
ATCC 53993]
Length = 179
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 136/175 (77%), Gaps = 2/175 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+MH TTIL VR+ VV+AGDGQV+ G TVMK NARKVRR+ G ++ GFAG++ADAFTL
Sbjct: 6 QMHGTTILCVRRGANVVMAGDGQVTFGNTVMKGNARKVRRIDPG-VLTGFAGATADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LER E KL+ +P QL +++VELAK+WR D+ LR LEAM+ +AD +L+I+G GDVL+PE
Sbjct: 65 LERFEAKLKAHPGQLAKAAVELAKEWRTDRVLRRLEAMLAVADDKQSLIISGQGDVLDPE 124
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG YAL+AARAL+ + A E+A++A+ IA DIC+YTNH +E L
Sbjct: 125 YGIIAIGSGGPYALAAARALLENSDLPAREVAKRALGIAGDICIYTNHQHTIEEL 179
>gi|319764383|ref|YP_004128320.1| 20S proteasome a and b subunits [Alicycliphilus denitrificans BC]
gi|330826602|ref|YP_004389905.1| ATP-dependent protease HslVU, peptidase subunit [Alicycliphilus
denitrificans K601]
gi|317118944|gb|ADV01433.1| 20S proteasome A and B subunits [Alicycliphilus denitrificans BC]
gi|329311974|gb|AEB86389.1| ATP-dependent protease HslVU, peptidase subunit [Alicycliphilus
denitrificans K601]
Length = 181
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 137/179 (76%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRK---DGV-VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTIL+VR+ G+ V + GDGQV+LG V+K ARKVR+L +G ++AGFAG++AD
Sbjct: 3 QYHGTTILSVRRKTAHGIQVALGGDGQVTLGNIVVKGTARKVRKLYQGRVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ L R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADHSASLIITGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE G++AIGSGG+YA SAA+AL+ +T+ A EI +K++ IA ++C+YTN + +ETL
Sbjct: 123 LEPEEGIVAIGSGGAYAHSAAKALLHNTELPAVEIVKKSLEIAGELCIYTNMHHTIETL 181
>gi|229170803|ref|YP_233503.2| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
syringae B728a]
gi|237798088|ref|ZP_04586549.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|302189055|ref|ZP_07265728.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
syringae 642]
gi|330961996|gb|EGH62256.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330971747|gb|EGH71813.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
aceris str. M302273PT]
gi|330977163|gb|EGH77121.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|331020940|gb|EGI00997.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 176
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 131/169 (77%), Gaps = 1/169 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E
Sbjct: 122 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIE 170
>gi|294139045|ref|YP_003555023.1| ATP-dependent protease HslV [Shewanella violacea DSS12]
gi|293325514|dbj|BAJ00245.1| ATP-dependent protease HslV [Shewanella violacea DSS12]
Length = 174
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L++++VE+AKDWR DK LR LEA++ +AD +L+ITG GDV++PE ++
Sbjct: 62 EAKLEMHQGHLMKAAVEMAKDWRSDKMLRKLEALLAVADSECSLIITGNGDVIQPEGDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG +A SAA AL+ +T+ +A EIA K+++IA ICV+TN +E L
Sbjct: 122 AIGSGGPFAQSAATALLENTELTATEIAEKSLTIAGGICVFTNQFKTIEEL 172
>gi|327398618|ref|YP_004339487.1| ATP-dependent protease hslV [Hippea maritima DSM 10411]
gi|327181247|gb|AEA33428.1| ATP-dependent protease hslV [Hippea maritima DSM 10411]
Length = 179
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI+ V+KD V I GDGQV+LG TV+K+NA+K+R+L + GFAG++ADAFTL
Sbjct: 3 QFKGTTIICVKKDNQVAIGGDGQVTLGSTVIKSNAKKIRKLYNDKVAVGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+LE KL +Y L R++VELAK+WR DK LR LEAM++ ADK +I+G GDVL P+
Sbjct: 63 FEKLEDKLNEYAGNLTRAAVELAKEWRTDKILRRLEAMLIAADKDSIYLISGNGDVLSPD 122
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG+YALSAA+A++ T +AE IA++++ IA++IC+YTN+NI +ETL
Sbjct: 123 EDVCAIGSGGNYALSAAKAMIRFTSLNAETIAKESLKIASEICIYTNNNITIETL 177
>gi|229918621|ref|YP_002887267.1| ATP-dependent protease peptidase subunit [Exiguobacterium sp. AT1b]
gi|229470050|gb|ACQ71822.1| 20S proteasome A and B subunits [Exiguobacterium sp. AT1b]
Length = 182
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 132/176 (75%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI VR +G ++GDGQV+ G V MK A+KVRRL G ++AGFAGS ADAFTL
Sbjct: 2 FHATTIFAVRHNGQCAMSGDGQVTFGNAVIMKNKAKKVRRLYGGKVVAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE Y L R++VELAK+WR DK LR LEA++++ D L+++G G+V+EP+
Sbjct: 62 FEKFESKLEMYNGNLPRAAVELAKEWRGDKMLRQLEALLIVMDAEHLLLVSGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YAL+A RAL+ S + SAEEIAR A+ IA ++CVYTN +++ET+
Sbjct: 122 DGILAIGSGGNYALAAGRALVRHSAEKSAEEIARAALEIAGELCVYTNDQVIVETI 177
>gi|317494768|ref|ZP_07953180.1| proteasome A-type and B-type [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917370|gb|EFV38717.1| proteasome A-type and B-type [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 189
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 15 TTIVSVRRNGKVVIGGDGQATMGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELF 74
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 75 ERKLELHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 134
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +A+RAL+ +T+ SA EI KA+ IA DIC+YTN +E L
Sbjct: 135 AIGSGGPYAQAASRALLENTELSAREIVDKALGIAGDICIYTNQFHTIEEL 185
>gi|71733580|ref|YP_272685.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257482923|ref|ZP_05636964.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|289624153|ref|ZP_06457107.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289647386|ref|ZP_06478729.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298485094|ref|ZP_07003190.1| ATP-dependent protease hslV [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|123638631|sp|Q48PI4|HSLV_PSE14 RecName: Full=ATP-dependent protease subunit HslV
gi|71554133|gb|AAZ33344.1| heat shock protein HslV [Pseudomonas syringae pv. phaseolicola
1448A]
gi|298160346|gb|EFI01371.1| ATP-dependent protease hslV [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|330865706|gb|EGH00415.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330945992|gb|EGH47301.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330984742|gb|EGH82845.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331009575|gb|EGH89631.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 176
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 131/169 (77%), Gaps = 1/169 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E
Sbjct: 122 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIE 170
>gi|63254369|gb|AAY35465.1| 20S proteasome, A and B subunits [Pseudomonas syringae pv. syringae
B728a]
Length = 192
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 131/169 (77%), Gaps = 1/169 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 18 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 77
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 78 EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 137
Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E
Sbjct: 138 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIE 186
>gi|302338072|ref|YP_003803278.1| 20S proteasome A and subunit betas [Spirochaeta smaragdinae DSM
11293]
gi|301635257|gb|ADK80684.1| 20S proteasome A and B subunits [Spirochaeta smaragdinae DSM 11293]
Length = 183
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 136/177 (76%), Gaps = 1/177 (0%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
++ MHATTIL VR++G V +AGDGQV+LGQT+MK NARKVRR+ G ++ GFAG++ADAF
Sbjct: 6 SLTMHATTILAVRREGNVAMAGDGQVTLGQTLMKGNARKVRRIYDGKVLVGFAGATADAF 65
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E E KL+Q+ + RS+VELAK WR D+ LR LEAM+L+AD T TL+I+G GDV+E
Sbjct: 66 TLFEHFEGKLKQHGGDITRSAVELAKLWRTDRALRRLEAMLLVADHTKTLLISGTGDVVE 125
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
PEN +AIGSGG++A +AA A + + S +EIA +AM IA+ IC+YTN +LE +
Sbjct: 126 PENEAIAIGSGGNFAYAAALAYLDASDLSPKEIALRAMKIASGICIYTNDQFILEEI 182
>gi|85060146|ref|YP_455848.1| ATP-dependent protease peptidase subunit [Sodalis glossinidius str.
'morsitans']
gi|123518774|sp|Q2NQY2|HSLV_SODGM RecName: Full=ATP-dependent protease subunit HslV
gi|84780666|dbj|BAE75443.1| heat shock protein [Sodalis glossinidius str. 'morsitans']
Length = 182
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VVI GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRKGHVVIGGDGQATLGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +A+++ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEVHQGHLVKAAVELAKDWRTDRMLRRLEALLAVANESDSLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A EI KA+ IA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTELGAREIVEKALGIAGDICIYTNQFHTIEEL 172
>gi|218667651|ref|YP_002427121.1| heat shock protein HslV [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218519864|gb|ACK80450.1| heat shock protein HslV [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 173
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/174 (59%), Positives = 135/174 (77%), Gaps = 2/174 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MH TTIL VR+ VV+AGDGQV+ G TVMK NARKVRR+ G ++ GFAG++ADAFTLL
Sbjct: 1 MHGTTILCVRRGANVVMAGDGQVTFGNTVMKGNARKVRRIDPG-VLTGFAGATADAFTLL 59
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KL+ +P QL +++VELAK+WR D+ LR LEAM+ +AD +L+I+G GDVL+PE
Sbjct: 60 ERFEAKLKAHPGQLAKAAVELAKEWRTDRVLRRLEAMLAVADDKQSLIISGQGDVLDPEY 119
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG YAL+AARAL+ + A E+A++A+ IA DIC+YTNH +E L
Sbjct: 120 GIIAIGSGGPYALAAARALLENSDLPAREVAKRALGIAGDICIYTNHQHTIEEL 173
>gi|228474958|ref|ZP_04059686.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
hominis SK119]
gi|314936586|ref|ZP_07843933.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
hominis subsp. hominis C80]
gi|228270943|gb|EEK12331.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
hominis SK119]
gi|313655205|gb|EFS18950.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
hominis subsp. hominis C80]
Length = 181
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 137/176 (77%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LG Q +MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 6 LHATTIYAVRHNGEAAMAGDGQVTLGEQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 66 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDGILVVSGTGEVIAPD 125
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL ++ +A+E+A +++ +A+DICV+TN NI++ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKRHASHMTAKEMAYESLKVASDICVFTNDNIIVETL 181
>gi|269140777|ref|YP_003297478.1| ATP-dependent protease peptidase subunit [Edwardsiella tarda
EIB202]
gi|294638264|ref|ZP_06716517.1| ATP-dependent protease HslVU, peptidase subunit [Edwardsiella tarda
ATCC 23685]
gi|267986438|gb|ACY86267.1| ATP-dependent protease peptidase subunit [Edwardsiella tarda
EIB202]
gi|291088517|gb|EFE21078.1| ATP-dependent protease HslVU, peptidase subunit [Edwardsiella tarda
ATCC 23685]
Length = 176
Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGKVVIGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A +I KA+ IA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGARDIVEKALGIAGDICIYTNQFHTIEEL 172
>gi|261407989|ref|YP_003244230.1| ATP-dependent protease peptidase subunit [Paenibacillus sp.
Y412MC10]
gi|315648142|ref|ZP_07901243.1| ATP-dependent protease peptidase subunit [Paenibacillus vortex
V453]
gi|329929347|ref|ZP_08283100.1| ATP-dependent protease HslVU, peptidase subunit [Paenibacillus sp.
HGF5]
gi|261284452|gb|ACX66423.1| 20S proteasome A and B subunits [Paenibacillus sp. Y412MC10]
gi|315276788|gb|EFU40131.1| ATP-dependent protease peptidase subunit [Paenibacillus vortex
V453]
gi|328936716|gb|EGG33159.1| ATP-dependent protease HslVU, peptidase subunit [Paenibacillus sp.
HGF5]
Length = 180
Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 135/176 (76%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI VR +G IAGDGQV+ G++V MK A+KVRRL +G ++AGFAGS ADA TL
Sbjct: 5 FHATTICAVRHNGTAAIAGDGQVTFGESVVMKQTAKKVRRLYRGQVVAGFAGSVADAITL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE++ L R++VELAKDWR D+ LR LEA++++ DKT L+I+G G+++EP+
Sbjct: 65 FEKFEGKLEEHHGNLQRAAVELAKDWRQDRVLRKLEALMIVMDKTGMLLISGGGEIIEPD 124
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V+AIGSGG++ALSA RAL + A++IAR+A+ IA+++CVYTN NI++E L
Sbjct: 125 DDVLAIGSGGNFALSAGRALKRHAGHMEAKDIAREALQIASEVCVYTNSNIIVEEL 180
>gi|330951293|gb|EGH51553.1| ATP-dependent protease subunit HslV [Pseudomonas syringae Cit 7]
Length = 176
Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 130/169 (76%), Gaps = 1/169 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG+ ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGAPADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E
Sbjct: 122 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIE 170
>gi|229597233|ref|YP_001747338.2| ATP-dependent protease peptidase subunit [Pseudomonas putida W619]
Length = 176
Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 138/169 (81%), Gaps = 1/169 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYNGEVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +L+++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EAQLQKHSGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLE 183
A+GSGG+YA +AARAL++ T SA EIA A++IA DICV+TNHN+ +E
Sbjct: 122 AMGSGGAYAQAAARALLNKTDLSAREIAETALNIAGDICVFTNHNLTIE 170
>gi|134284129|ref|ZP_01770823.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei 305]
gi|134244581|gb|EBA44685.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei 305]
Length = 211
Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 36 QFHGTTILSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 95
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 96 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRLLRRLEAMLIAADATTTLVITGNGDVLDPE 155
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T S EI KA+ IA D+C+YTNHN ++ET++
Sbjct: 156 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKALGIAGDMCIYTNHNRIIETIE 211
>gi|299822640|ref|ZP_07054526.1| ATP-dependent protease HslVU [Listeria grayi DSM 20601]
gi|299816169|gb|EFI83407.1| ATP-dependent protease HslVU [Listeria grayi DSM 20601]
Length = 179
Score = 201 bits (512), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 135/179 (75%), Gaps = 4/179 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V+ +G +AGDGQV+LG++V MK A+KVR+L GN+IAGFAGS ADAF
Sbjct: 1 MELHATTIFAVQHNGKAAMAGDGQVTLGESVVMKHTAKKVRKLFNGNVIAGFAGSVADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R+SVELAK WR D LR LEAM+++ DK L+++G G+V+E
Sbjct: 61 TLFEKFENKLNEYNGNLERASVELAKQWRSDNVLRKLEAMLIVMDKEKLLLVSGTGEVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGG+YAL+A RAL + A+EIAR A+ IA++ICV+TN +I +E L
Sbjct: 121 PDDGILAIGSGGNYALAAGRALKRYSSEVIEAKEIARNALQIASEICVFTNDHITVEEL 179
>gi|156973045|ref|YP_001443952.1| ATP-dependent protease peptidase subunit [Vibrio harveyi ATCC
BAA-1116]
gi|269959685|ref|ZP_06174065.1| ATP-dependent protease HslV [Vibrio harveyi 1DA3]
gi|166223005|sp|A7MWJ4|HSLV_VIBHB RecName: Full=ATP-dependent protease subunit HslV
gi|156524639|gb|ABU69725.1| hypothetical protein VIBHAR_00724 [Vibrio harveyi ATCC BAA-1116]
gi|269835608|gb|EEZ89687.1| ATP-dependent protease HslV [Vibrio harveyi 1DA3]
Length = 183
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG+YA +AA AL+ +T A EIA KA++IA DICV+TNH+ +E L+
Sbjct: 122 AIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEELE 173
>gi|217425069|ref|ZP_03456565.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
pseudomallei 576]
gi|226199822|ref|ZP_03795373.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei Pakistan 9]
gi|237810381|ref|YP_002894832.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei MSHR346]
gi|238563256|ref|ZP_00439196.2| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
mallei GB8 horse 4]
gi|254174901|ref|ZP_04881562.1| protease HslVU, subunit HslV [Burkholderia mallei ATCC 10399]
gi|254182214|ref|ZP_04888811.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei 1655]
gi|254188140|ref|ZP_04894652.1| protease HslVU, subunit HslV [Burkholderia pseudomallei Pasteur
52237]
gi|254201828|ref|ZP_04908192.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia mallei FMH]
gi|254207157|ref|ZP_04913508.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia mallei JHU]
gi|147747722|gb|EDK54798.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia mallei FMH]
gi|147752699|gb|EDK59765.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia mallei JHU]
gi|157935820|gb|EDO91490.1| protease HslVU, subunit HslV [Burkholderia pseudomallei Pasteur
52237]
gi|160695946|gb|EDP85916.1| protease HslVU, subunit HslV [Burkholderia mallei ATCC 10399]
gi|184212752|gb|EDU09795.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei 1655]
gi|217392089|gb|EEC32115.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
pseudomallei 576]
gi|225928173|gb|EEH24209.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei Pakistan 9]
gi|237503704|gb|ACQ96022.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei MSHR346]
gi|238521089|gb|EEP84543.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
mallei GB8 horse 4]
Length = 211
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 36 QFHGTTILSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 95
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 96 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRLLRRLEAMLIAADATTTLVITGNGDVLDPE 155
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T S EI KA+ IA D+C+YTNHN ++ET++
Sbjct: 156 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKALGIAGDMCIYTNHNRIIETIE 211
>gi|76577992|gb|ABA47467.1| ATP-dependent protease hslV [Burkholderia pseudomallei 1710b]
gi|121229859|gb|ABM52377.1| protease HslVU, subunit HslV [Burkholderia mallei SAVP1]
gi|124292619|gb|ABN01888.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
mallei NCTC 10229]
gi|126244154|gb|ABO07247.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
mallei NCTC 10247]
Length = 214
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 39 QFHGTTILSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 98
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 99 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRLLRRLEAMLIAADATTTLVITGNGDVLDPE 158
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T S EI KA+ IA D+C+YTNHN ++ET++
Sbjct: 159 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKALGIAGDMCIYTNHNRIIETIE 214
>gi|330818650|ref|YP_004362355.1| ATP-dependent protease peptidase subunit [Burkholderia gladioli
BSR3]
gi|327371043|gb|AEA62399.1| ATP-dependent protease peptidase subunit [Burkholderia gladioli
BSR3]
Length = 178
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QYHGTTIVSVRRGEQVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ ADKT TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADKTTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T+ S EI +KA++IA D+C+YTNH+ ++ET++
Sbjct: 123 GGICAIGSGGSYAQAAARALAENTELSPGEIVKKALTIAGDMCIYTNHSHIIETIE 178
>gi|320354503|ref|YP_004195842.1| ATP dependent peptidase CodWX, CodW component [Desulfobulbus
propionicus DSM 2032]
gi|320123005|gb|ADW18551.1| ATP dependent peptidase CodWX, CodW component [Desulfobulbus
propionicus DSM 2032]
Length = 179
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TTIL VR G VV+AGDGQV+LG TV+K ARKVRRL +I GFAGS+ADAFTL
Sbjct: 5 KIRSTTILAVRHQGRVVVAGDGQVTLGTTVIKHQARKVRRLYHDQVITGFAGSTADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+RLE+KLEQY L+R++VELAKDWRMDK LR LEAM++ D +L+++G GDV+E +
Sbjct: 65 YDRLEQKLEQYNGNLMRAAVELAKDWRMDKMLRRLEAMLIAVDAKHSLLLSGTGDVIEAD 124
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG YA +AA+AL++ + AE IAR A+ IA ICVYTN NIV+E++
Sbjct: 125 DGILAIGSGGPYAQAAAKALVAHSSLDAEAIARTALEIAGSICVYTNTNIVVESI 179
>gi|169757653|gb|ACA70969.1| 20S proteasome A and B subunits [Pseudomonas putida W619]
Length = 192
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 138/169 (81%), Gaps = 1/169 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 18 TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYNGEVIAGFAGATADAFTLFERF 77
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +L+++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 78 EAQLQKHSGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 137
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLE 183
A+GSGG+YA +AARAL++ T SA EIA A++IA DICV+TNHN+ +E
Sbjct: 138 AMGSGGAYAQAAARALLNKTDLSAREIAETALNIAGDICVFTNHNLTIE 186
>gi|227113219|ref|ZP_03826875.1| ATP-dependent protease peptidase subunit [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
gi|227327578|ref|ZP_03831602.1| ATP-dependent protease peptidase subunit [Pectobacterium
carotovorum subsp. carotovorum WPP14]
gi|253686573|ref|YP_003015763.1| 20S proteasome A and B subunits [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259491394|sp|C6DHM7|HSLV_PECCP RecName: Full=ATP-dependent protease subunit HslV
gi|251753151|gb|ACT11227.1| 20S proteasome A and B subunits [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 176
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYHDRVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A +I K++ IA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGARDIVEKSLGIAGDICIYTNQFHTIEEL 172
>gi|238898391|ref|YP_002924072.1| peptidase component of the HslUV protease [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|259491390|sp|C4K5T1|HSLV_HAMD5 RecName: Full=ATP-dependent protease subunit HslV
gi|229466150|gb|ACQ67924.1| peptidase component of the HslUV protease [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 178
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 131/173 (75%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRHNHVVIGGDGQVTLGNTVMKGNAKKVRRLHHDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ QL +++VE+AKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 EAKLKLCSGQLTKAAVEMAKDWRTDRMLRRLEALLAVADETASLIITGNGDVIQPEDDLI 121
Query: 136 AIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG YA ++ARAL+ N SA EI K+++IA +IC+YTN +E LK+
Sbjct: 122 AIGSGGPYAQASARALLENTNLSAREIVEKSLTIAGNICIYTNQYPTIEELKI 174
>gi|53717846|ref|YP_106832.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
K96243]
gi|53724453|ref|YP_104728.1| ATP-dependent protease peptidase subunit [Burkholderia mallei ATCC
23344]
gi|167001362|ref|ZP_02267161.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
mallei PRL-20]
gi|167717565|ref|ZP_02400801.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
DM98]
gi|167736608|ref|ZP_02409382.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
14]
gi|167813706|ref|ZP_02445386.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
91]
gi|167822221|ref|ZP_02453692.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
9]
gi|167843816|ref|ZP_02469324.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
B7210]
gi|167892314|ref|ZP_02479716.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
7894]
gi|167900811|ref|ZP_02488016.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
NCTC 13177]
gi|167909031|ref|ZP_02496122.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
112]
gi|167917070|ref|ZP_02504161.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
BCC215]
gi|226830782|ref|YP_001064484.2| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
1106a]
gi|228969303|ref|YP_331800.2| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
1710b]
gi|228993244|ref|YP_001057244.2| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
668]
gi|229008325|ref|YP_994210.2| ATP-dependent protease peptidase subunit [Burkholderia mallei
SAVP1]
gi|229027668|ref|YP_001082948.2| ATP-dependent protease peptidase subunit [Burkholderia mallei NCTC
10247]
gi|229780996|ref|YP_001028137.2| ATP-dependent protease peptidase subunit [Burkholderia mallei NCTC
10229]
gi|242314355|ref|ZP_04813371.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
pseudomallei 1106b]
gi|254196175|ref|ZP_04902599.1| protease HslVU, subunit HslV [Burkholderia pseudomallei S13]
gi|254258080|ref|ZP_04949134.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
pseudomallei 1710a]
gi|254295747|ref|ZP_04963204.1| protease HslVU, subunit HslV [Burkholderia pseudomallei 406e]
gi|254359663|ref|ZP_04975934.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia mallei 2002721280]
gi|85542199|sp|Q62EZ9|HSLV_BURMA RecName: Full=ATP-dependent protease subunit HslV
gi|85542200|sp|Q63YI3|HSLV_BURPS RecName: Full=ATP-dependent protease subunit HslV
gi|229486312|sp|A3NQ63|HSLV_BURP0 RecName: Full=ATP-dependent protease subunit HslV
gi|52208260|emb|CAH34191.1| ATP-dependent Hsl protease [Burkholderia pseudomallei K96243]
gi|52427876|gb|AAU48469.1| protease HslVU, subunit HslV [Burkholderia mallei ATCC 23344]
gi|148028877|gb|EDK86809.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia mallei 2002721280]
gi|157806143|gb|EDO83313.1| protease HslVU, subunit HslV [Burkholderia pseudomallei 406e]
gi|169652918|gb|EDS85611.1| protease HslVU, subunit HslV [Burkholderia pseudomallei S13]
gi|210148305|gb|ABN89094.2| shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei 1106a]
gi|242137594|gb|EES23996.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
pseudomallei 1106b]
gi|243062874|gb|EES45060.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
mallei PRL-20]
gi|254216769|gb|EET06153.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
pseudomallei 1710a]
gi|283775070|gb|ABN81994.2| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
pseudomallei 668]
Length = 178
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTILSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRLLRRLEAMLIAADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T S EI KA+ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKALGIAGDMCIYTNHNRIIETIE 178
>gi|291286264|ref|YP_003503080.1| 20S proteasome A and B subunits [Denitrovibrio acetiphilus DSM
12809]
gi|290883424|gb|ADD67124.1| 20S proteasome A and B subunits [Denitrovibrio acetiphilus DSM
12809]
Length = 178
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M TT++ V+KDG I DGQV+ G TV+K NA+KVR++ ++ GFAGS+ADAFTL+
Sbjct: 5 MKGTTVVAVKKDGKTAIGADGQVTFGNTVLKHNAKKVRKVYNNKVVCGFAGSTADAFTLM 64
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KLEQ+ QLLR++VELAKDWR D+YLR LEAM+++AD ++TG GDV+EP+N
Sbjct: 65 ERFEAKLEQHGGQLLRAAVELAKDWRTDRYLRKLEAMMIVADAEELYIMTGNGDVVEPQN 124
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV AIGSGG YA +AA A+ +T+ S EI KA+ IAA+IC+YTN NI++E +
Sbjct: 125 GVAAIGSGGPYAQAAAIAMAENTELSPSEIVDKALHIAANICIYTNDNIIVEEI 178
>gi|320322073|gb|EFW78169.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330826|gb|EFW86800.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330872046|gb|EGH06195.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 176
Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 130/169 (76%), Gaps = 1/169 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R+ VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EAQLEKHQGHLVRAVVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E
Sbjct: 122 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIE 170
>gi|255020690|ref|ZP_05292752.1| ATP-dependent protease HslV [Acidithiobacillus caldus ATCC 51756]
gi|254969926|gb|EET27426.1| ATP-dependent protease HslV [Acidithiobacillus caldus ATCC 51756]
Length = 180
Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 139/174 (79%), Gaps = 2/174 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TTIL+VR+ VV+AGDGQV+ G TVMKANARKVRRL + +++ GFAG++ADAFTLL
Sbjct: 7 LHGTTILSVRRGQNVVMAGDGQVTFGNTVMKANARKVRRL-EADVLVGFAGATADAFTLL 65
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KL+ +P QL +++VELAK+WR D+ LR LEAM+ +AD+ +L++TG GDVLEPE
Sbjct: 66 ERFEAKLKAHPGQLAKAAVELAKEWRTDRVLRRLEAMLAVADRQQSLILTGQGDVLEPEY 125
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG YAL+AARAL+ ++ SA IA +A+ IAADIC+YTN +E L
Sbjct: 126 GIIAIGSGGPYALAAARALLEHSELSARAIAERALVIAADICIYTNQQHSVEEL 179
>gi|225848446|ref|YP_002728609.1| ATP-dependent protease peptidase subunit [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643867|gb|ACN98917.1| ATP-dependent protease HslVU, peptidase subunit
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 178
Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TTIL VR++G V+AGDGQV+LG +VMK A+KVR+L +G ++ GFAGS+AD L
Sbjct: 3 KIRSTTILVVRRNGKTVMAGDGQVTLGSSVMKQTAKKVRKLNEGRVVVGFAGSAADGLAL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ERLE+KL ++ L+R+SVELAKDWR+DKYLR LEA+++ ADK L+++G GDV+EP+
Sbjct: 63 MERLEEKLNKHRGNLIRASVELAKDWRLDKYLRRLEAVMIAADKENILLLSGNGDVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
V+AIGSGG YA SAA AL +T A +I +AM IA +IC+YTN N ++E ++
Sbjct: 123 EPVLAIGSGGDYARSAALALYRNTDLDARKIVEEAMKIAGEICIYTNTNFIIEEIE 178
>gi|50123181|ref|YP_052348.1| ATP-dependent protease peptidase subunit [Pectobacterium
atrosepticum SCRI1043]
gi|85542202|sp|Q6CZ92|HSLV_ERWCT RecName: Full=ATP-dependent protease subunit HslV
gi|49613707|emb|CAG77158.1| ATP-dependent protease (heat shock protein) [Pectobacterium
atrosepticum SCRI1043]
Length = 176
Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYHDRVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A +I K++ IA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGARDIVEKSLGIAGDICIYTNQFHTIEEL 172
>gi|28897024|ref|NP_796629.1| ATP-dependent protease peptidase subunit [Vibrio parahaemolyticus
RIMD 2210633]
gi|153840681|ref|ZP_01993348.1| ATP-dependent protease HslV [Vibrio parahaemolyticus AQ3810]
gi|260362283|ref|ZP_05775250.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus K5030]
gi|260897598|ref|ZP_05906094.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus Peru-466]
gi|260899528|ref|ZP_05907923.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus AQ4037]
gi|31340156|sp|Q87T20|HSLV_VIBPA RecName: Full=ATP-dependent protease subunit HslV
gi|28805232|dbj|BAC58513.1| protease HslVU, subunit HslV [Vibrio parahaemolyticus RIMD 2210633]
gi|149745630|gb|EDM56788.1| ATP-dependent protease HslV [Vibrio parahaemolyticus AQ3810]
gi|308087505|gb|EFO37200.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus Peru-466]
gi|308108817|gb|EFO46357.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus AQ4037]
gi|308111328|gb|EFO48868.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus K5030]
Length = 183
Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ +T A EIA KA++IA DICV+TNH+ +E L
Sbjct: 122 AIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEEL 172
>gi|260877942|ref|ZP_05890297.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus AN-5034]
gi|308090062|gb|EFO39757.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus AN-5034]
gi|328471828|gb|EGF42705.1| ATP-dependent protease subunit HslV [Vibrio parahaemolyticus 10329]
Length = 183
Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ +T A EIA KA++IA DICV+TNH+ +E L
Sbjct: 122 AIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEEL 172
>gi|289550956|ref|YP_003471860.1| ATP-dependent protease HslV [Staphylococcus lugdunensis HKU09-01]
gi|289180488|gb|ADC87733.1| ATP-dependent protease HslV [Staphylococcus lugdunensis HKU09-01]
Length = 180
Score = 200 bits (509), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 136/179 (75%), Gaps = 3/179 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADA 68
+ +HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL ++AGFAGS ADA
Sbjct: 2 STSIHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYDDKVLAGFAGSVADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK+ LV++G G+V+
Sbjct: 62 FTLFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVVDKSGILVVSGTGEVI 121
Query: 129 EPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ ++AIGSGG+YALSA RAL + SA+E+A +++ +A+DICV+TN NI++ETL
Sbjct: 122 APDDDIIAIGSGGNYALSAGRALKRHAAHLSAKEMAYESLKVASDICVFTNDNIIVETL 180
>gi|304436893|ref|ZP_07396857.1| ATP-dependent protease HslVU [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370092|gb|EFM23753.1| ATP-dependent protease HslVU [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 179
Score = 200 bits (509), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 136/176 (77%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+KDG V IAGDGQV+ G+ +MKANARKVRRL G I+AGFAGS ADAFTL
Sbjct: 3 FHATTIVAVKKDGKVAIAGDGQVTFGERAIMKANARKVRRLYHGKILAGFAGSVADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE Y L R++VELAKDWR DK LR LEA++L+AD+ L+I+G G+V+EP+
Sbjct: 63 FEKFEVKLESYSGNLQRAAVELAKDWRTDKVLRKLEALLLVADQDSILMISGNGEVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG +AL+AARAL++ A IA++++SIAADICVYTNH+I +E L+
Sbjct: 123 GDCTAIGSGGFFALAAARALVAHSTLDAPAIAKESLSIAADICVYTNHHITVEVLE 178
>gi|126176058|ref|YP_001052207.1| ATP-dependent protease peptidase subunit [Shewanella baltica OS155]
gi|160873587|ref|YP_001552903.1| ATP-dependent protease peptidase subunit [Shewanella baltica OS195]
gi|217971679|ref|YP_002356430.1| ATP-dependent protease peptidase subunit [Shewanella baltica OS223]
gi|304411508|ref|ZP_07393121.1| 20S proteasome A and B subunits [Shewanella baltica OS183]
gi|307306716|ref|ZP_07586458.1| 20S proteasome A and B subunits [Shewanella baltica BA175]
gi|166222998|sp|A3D9C5|HSLV_SHEB5 RecName: Full=ATP-dependent protease subunit HslV
gi|189036237|sp|A9KYP9|HSLV_SHEB9 RecName: Full=ATP-dependent protease subunit HslV
gi|254802423|sp|B8E6E4|HSLV_SHEB2 RecName: Full=ATP-dependent protease subunit HslV
gi|125999263|gb|ABN63338.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella baltica OS155]
gi|160859109|gb|ABX47643.1| 20S proteasome A and B subunits [Shewanella baltica OS195]
gi|217496814|gb|ACK45007.1| 20S proteasome A and B subunits [Shewanella baltica OS223]
gi|304350035|gb|EFM14440.1| 20S proteasome A and B subunits [Shewanella baltica OS183]
gi|306910684|gb|EFN41113.1| 20S proteasome A and B subunits [Shewanella baltica BA175]
gi|315265815|gb|ADT92668.1| 20S proteasome A and B subunits [Shewanella baltica OS678]
Length = 174
Score = 200 bits (509), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + LLRS+VELAKDWR D+ LR LEA++++AD +L+ITG GDV++PE+ ++
Sbjct: 62 EAKLEMHQGHLLRSAVELAKDWRTDRMLRKLEALLVVADAETSLIITGNGDVVQPEHDLV 121
Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+Y +A L +T+ SA EIA K+++IAADICV+TN +E L
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAADICVFTNQFKTIEEL 172
>gi|323700574|ref|ZP_08112486.1| 20S proteasome, A and B subunits [Desulfovibrio sp. ND132]
gi|323460506|gb|EGB16371.1| 20S proteasome, A and B subunits [Desulfovibrio desulfuricans
ND132]
Length = 179
Score = 200 bits (509), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 129/176 (73%), Gaps = 2/176 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTI+ V+ + +AGDGQV+LGQ V MK ARKVRR+ K + GFAG++ADAF
Sbjct: 1 MELRGTTIVAVKDENGTAVAGDGQVTLGQAVAMKHTARKVRRIYKDRVSIGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER E KLE Y LLR++VELAKDWR DKYLR LEAM+L AD L+I+G GDV+E
Sbjct: 61 TLSERFESKLETYAGNLLRAAVELAKDWRTDKYLRKLEAMLLAADGEHILIISGTGDVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
P++GV AIGSGGSY +A +T AE IARKAM IAADICVYTN++I +ET
Sbjct: 121 PDDGVAAIGSGGSYALAAARALQQNTDLPAETIARKAMEIAADICVYTNNHITIET 176
>gi|296133055|ref|YP_003640302.1| 20S proteasome A and B subunits [Thermincola sp. JR]
gi|296031633|gb|ADG82401.1| 20S proteasome A and B subunits [Thermincola potens JR]
Length = 180
Score = 200 bits (509), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 132/175 (75%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ V+K G IAGDGQV+ G V+K ARKVRRL ++AGFAGS ADAFTL
Sbjct: 2 FKGTTIVAVKKGGQTAIAGDGQVTFGGNVVLKHQARKVRRLYNDKVLAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAK+WRMDK LR LEA++++AD L+I+G G+V+EP+
Sbjct: 62 FEKFEGKLEEYRGNLQRAAVELAKEWRMDKILRRLEALLIVADSKHLLIISGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGGSYAL+AARAL+ T+ A +IAR+A++IAA ICV+TN NIV+E L
Sbjct: 122 DDVAAIGSGGSYALAAARALIKFTELDAAKIAREALTIAASICVFTNDNIVVEEL 176
>gi|304404238|ref|ZP_07385900.1| 20S proteasome A and B subunits [Paenibacillus curdlanolyticus YK9]
gi|304347216|gb|EFM13048.1| 20S proteasome A and B subunits [Paenibacillus curdlanolyticus YK9]
Length = 180
Score = 200 bits (509), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 134/176 (76%), Gaps = 3/176 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
++ HATTI VR +G IAGDGQV+ G + VMK A+KVRRL +G ++AGFAGS ADA
Sbjct: 3 MQFHATTICAVRHNGQGAIAGDGQVTFGNSMVMKGTAKKVRRLYRGQVVAGFAGSVADAI 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE++ L RS+VELAK+WR D+ LR LEAM+L+ D L+I+G G+++E
Sbjct: 63 TLFEKFEGKLEEHHGNLQRSAVELAKEWRSDRVLRKLEAMLLVMDAQGLLLISGNGEIIE 122
Query: 130 PENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
P++ V+AIGSGGS+ALSAARAL +T A+++A+ A+ IAADICV+TN NI++E
Sbjct: 123 PDDDVLAIGSGGSFALSAARALKQHATHMEAKDMAKAALEIAADICVFTNRNIIVE 178
>gi|325295313|ref|YP_004281827.1| ATP-dependent protease hslV [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065761|gb|ADY73768.1| ATP-dependent protease hslV [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 177
Score = 200 bits (508), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 106/174 (60%), Positives = 134/174 (77%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTI V +DG V +AGDGQV+LG T+ K ARKVR++ G ++ GFAGS ADAF LL
Sbjct: 3 FHATTICAVLRDGKVAMAGDGQVTLGNTIFKNGARKVRKIYGGRVLTGFAGSVADAFALL 62
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KL+ Y LL+S+VELAKDWR D+ LR LEAM+L+ADKT L+I+G GDV+EP+
Sbjct: 63 ERFEDKLQTYSGNLLKSAVELAKDWRTDRVLRRLEAMLLVADKTKILLISGNGDVIEPDI 122
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VMAIGSGG+YA +AA AL +T SA+EIA+K++ IA +ICVYTN NI++E L
Sbjct: 123 PVMAIGSGGAYAQAAATALYENTDLSAKEIAQKSLEIAGNICVYTNTNIIVEEL 176
>gi|188996765|ref|YP_001931016.1| 20S proteasome A and B subunits [Sulfurihydrogenibium sp. YO3AOP1]
gi|229486365|sp|B2V939|HSLV_SULSY RecName: Full=ATP-dependent protease subunit HslV
gi|188931832|gb|ACD66462.1| 20S proteasome A and B subunits [Sulfurihydrogenibium sp. YO3AOP1]
Length = 178
Score = 200 bits (508), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 98/176 (55%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TTIL VR++G VIAGDGQV+LG V+K A+K+R L +G +I GFAGS+AD L
Sbjct: 3 KIKSTTILAVRRNGKTVIAGDGQVTLGSAVVKHTAKKIRVLNEGKVIVGFAGSAADGLAL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ERLE+KL +Y L++S+VELAKDWR+DKYLR LEA+++ ADK L+++G GDV+EP+
Sbjct: 63 MERLEEKLNKYKGNLVKSAVELAKDWRLDKYLRRLEAVMIAADKNNMLLLSGNGDVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
V+AIGSGG YA SAA AL +T A +I +AM IA +IC+YTN N V+E ++
Sbjct: 123 EPVLAIGSGGDYARSAALALYRNTDLDARKIVEEAMKIAGEICIYTNQNFVIEEIE 178
>gi|304414793|ref|ZP_07395752.1| ATP-dependent protease peptidase subunit [Candidatus Regiella
insecticola LSR1]
gi|304283145|gb|EFL91558.1| ATP-dependent protease peptidase subunit [Candidatus Regiella
insecticola LSR1]
Length = 181
Score = 200 bits (508), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 133/172 (77%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+D VV+ GDGQV+LG TVMK NA KVR L K +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRDNEVVMGGDGQVTLGNTVMKKNACKVRFLYKNQVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PE+ ++
Sbjct: 62 EKKLEAHQGHLTKAAVELAKDWRTDRMLRRLEALLAVADQNASLIITGNGDVIQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA S+ARAL+ +T+ SA++I K+++IA DIC+YTN ++ LK
Sbjct: 122 AIGSGGPYAQSSARALLENTKLSAKKIVEKSLNIAGDICIYTNRCQTIKELK 173
>gi|163803565|ref|ZP_02197433.1| ATP-dependent protease peptidase subunit [Vibrio sp. AND4]
gi|159172652|gb|EDP57508.1| ATP-dependent protease peptidase subunit [Vibrio sp. AND4]
Length = 183
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG+YA +AA AL+ +T+ A +IA KA++IA DICV+TNH +E L+
Sbjct: 122 AIGSGGAYAQAAATALLENTELDARKIAEKALNIAGDICVFTNHQHTVEELE 173
>gi|315658458|ref|ZP_07911330.1| ATP-dependent protease HslVU [Staphylococcus lugdunensis M23590]
gi|315496787|gb|EFU85110.1| ATP-dependent protease HslVU [Staphylococcus lugdunensis M23590]
Length = 180
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 136/179 (75%), Gaps = 3/179 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADA 68
+ +HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL ++AGFAGS ADA
Sbjct: 2 STSIHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYDDKVLAGFAGSVADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK+ LV++G G+V+
Sbjct: 62 FTLFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKSGILVVSGTGEVI 121
Query: 129 EPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ ++AIGSGG+YALSA RAL + SA+E+A +++ +A+DICV+TN NI++ETL
Sbjct: 122 APDDDIIAIGSGGNYALSAGRALKRHAAHLSAKEMAYESLKVASDICVFTNDNIIVETL 180
>gi|24375648|ref|NP_719691.1| ATP-dependent protease peptidase subunit [Shewanella oneidensis
MR-1]
gi|113971850|ref|YP_735643.1| ATP-dependent protease peptidase subunit [Shewanella sp. MR-4]
gi|114045944|ref|YP_736494.1| ATP-dependent protease peptidase subunit [Shewanella sp. MR-7]
gi|117922131|ref|YP_871323.1| ATP-dependent protease peptidase subunit [Shewanella sp. ANA-3]
gi|34222561|sp|Q8E9V0|HSLV_SHEON RecName: Full=ATP-dependent protease subunit HslV
gi|122945000|sp|Q0HZL8|HSLV_SHESR RecName: Full=ATP-dependent protease subunit HslV
gi|123029282|sp|Q0HED1|HSLV_SHESM RecName: Full=ATP-dependent protease subunit HslV
gi|166223002|sp|A0L1J8|HSLV_SHESA RecName: Full=ATP-dependent protease subunit HslV
gi|24350562|gb|AAN57135.1|AE015849_2 ATP-dependent protease HslV [Shewanella oneidensis MR-1]
gi|113886534|gb|ABI40586.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella sp. MR-4]
gi|113887386|gb|ABI41437.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella sp. MR-7]
gi|117614463|gb|ABK49917.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella sp. ANA-3]
Length = 174
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + LLRS+VELAKDWR D+ LR LEAM+++AD +L+ITG GDV++PE+ ++
Sbjct: 62 ESKLEMHQGHLLRSAVELAKDWRTDRMLRKLEAMLVVADAEASLIITGNGDVVQPEHDLV 121
Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+Y +A L +T+ SA EIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAGDICVFTNQFKTIEEL 172
>gi|284159403|ref|YP_440723.3| ATP-dependent protease peptidase subunit [Burkholderia
thailandensis E264]
gi|83654306|gb|ABC38369.1| protease HslVU, subunit HslV [Burkholderia thailandensis E264]
Length = 214
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 39 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 98
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 99 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 158
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T S EI K+++IA D+C+YTNHN ++ET++
Sbjct: 159 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKSLAIAGDMCIYTNHNRIIETIE 214
>gi|78188753|ref|YP_379091.1| ATP-dependent protease peptidase subunit [Chlorobium
chlorochromatii CaD3]
gi|123580058|sp|Q3ASH7|HSLV_CHLCH RecName: Full=ATP-dependent protease subunit HslV
gi|78170952|gb|ABB28048.1| heat shock protein HslV [Chlorobium chlorochromatii CaD3]
Length = 182
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 141/181 (77%), Gaps = 2/181 (1%)
Query: 7 KHYAV-KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
KH ++ ++ +TT++ V ++G + DGQ++LG TV+K + +K+RRL +G ++AGFAG++
Sbjct: 2 KHTSLPEIRSTTVIGVIRNGQAALGSDGQMTLGNTVVKHSTKKIRRLYQGKLLAGFAGAT 61
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADA TLL+R E KLE + +L R+SVELA+DWR DKYLR LEAMI I L+I+G G
Sbjct: 62 ADALTLLDRFEAKLEAFGGKLERASVELARDWRTDKYLRRLEAMIAIVSNDRALIISGTG 121
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLET 184
DV+EPE+G++AIGSG YAL+AAR+LM T SA+EI +++++IAADIC+YTN++IV+E
Sbjct: 122 DVIEPEDGIVAIGSGSMYALAAARSLMKHTSLSAQEIVQESLAIAADICIYTNNHIVVEE 181
Query: 185 L 185
L
Sbjct: 182 L 182
>gi|307824295|ref|ZP_07654521.1| 20S proteasome A and B subunits [Methylobacter tundripaludum SV96]
gi|307734675|gb|EFO05526.1| 20S proteasome A and B subunits [Methylobacter tundripaludum SV96]
Length = 182
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TTIL+VR+ VVI GDGQV+LG TVMK NARKVRRL +IAGFAG++ADAFT
Sbjct: 1 MSFRGTTILSVRRGDKVVIGGDGQVTLGNTVMKGNARKVRRLYHDKVIAGFAGATADAFT 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KLE++ L R++VE+AKDWR D+ LR LEA++ IAD +L+I+G GDV+EP
Sbjct: 61 LFEHFEGKLEKHRGNLTRAAVEMAKDWRTDRALRKLEALLTIADARTSLIISGTGDVIEP 120
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
E +MAIGSGG++A +AARAL+ N SA EI ++++IAADIC+YTNHN+ +E L
Sbjct: 121 EFDLMAIGSGGAFAQAAARALLENTNLSAREIVERSLNIAADICIYTNHNLRIEEL 176
>gi|332976817|gb|EGK13645.1| ATP-dependent protease HslVU [Desmospora sp. 8437]
Length = 176
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 133/174 (76%), Gaps = 3/174 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
MHATTI + +G IAGDGQV+ G Q VMK A+KVRRL +G ++AGFAGS ADA TL
Sbjct: 1 MHATTIFAIHHNGSGAIAGDGQVTFGNQMVMKHQAKKVRRLYRGQVVAGFAGSVADAVTL 60
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E +LE++ L R++VELAK+WR DK LR LEAM+++ D+ L+++G G+V+EP+
Sbjct: 61 FEKFEGRLEEFHGNLPRAAVELAKEWRADKVLRRLEAMLVVMDREHLLLVSGNGEVIEPD 120
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
+G+MAIGSGGSYALSA RAL ++ +A EIA+ A++IA++ICV+TN IVLE
Sbjct: 121 DGMMAIGSGGSYALSAGRALSRYASDLTAREIAKAALTIASEICVFTNDQIVLE 174
>gi|261819536|ref|YP_003257642.1| ATP-dependent protease peptidase subunit [Pectobacterium wasabiae
WPP163]
gi|261603549|gb|ACX86035.1| 20S proteasome A and B subunits [Pectobacterium wasabiae WPP163]
Length = 176
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYHDRVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A +I K++ IA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGALDIVEKSLGIAGDICIYTNQFHTIEEL 172
>gi|322834996|ref|YP_004215023.1| 20S proteasome A and B subunits [Rahnella sp. Y9602]
gi|321170197|gb|ADW75896.1| 20S proteasome A and B subunits [Rahnella sp. Y9602]
Length = 193
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 19 TTIVSVRRNGKVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 78
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+I+G GDV++PEN ++
Sbjct: 79 ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIISGNGDVIQPENDLI 138
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +++ A +I K++SIA DIC+YTN +E L
Sbjct: 139 AIGSGGPYAQAAARALLENSELEARDIVEKSLSIAGDICIYTNQFHTIEEL 189
>gi|262195486|ref|YP_003266695.1| 20S proteasome A and subunit betas [Haliangium ochraceum DSM 14365]
gi|262078833|gb|ACY14802.1| 20S proteasome A and B subunits [Haliangium ochraceum DSM 14365]
Length = 175
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 130/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M ATTIL+VR+ VVIAGDGQVSLGQT+MKA+ARKVRR+ +G +AGFAGS+AD L
Sbjct: 1 MRATTILSVRRGNHVVIAGDGQVSLGQTIMKASARKVRRMNEGAAVAGFAGSAADGIALF 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERL+ KL + L R+ VE+AKDWR D+ LR LEAM++IAD+ T +++G GDV+EP++
Sbjct: 61 ERLDGKLRGHGGNLRRAVVEMAKDWRTDRVLRRLEAMLIIADREQTYLVSGTGDVIEPDD 120
Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV++IGSGG Y +A + T+ +IA AM IAADICVYTNH +V+E L
Sbjct: 121 GVVSIGSGGPYALAAARALIAKTELGVRDIAETAMGIAADICVYTNHKLVIEEL 174
>gi|154686031|ref|YP_001421192.1| ATP-dependent protease peptidase subunit [Bacillus
amyloliquefaciens FZB42]
gi|166221623|sp|A7Z4N5|CLPQ_BACA2 RecName: Full=ATP-dependent protease subunit ClpQ
gi|154351882|gb|ABS73961.1| ClpQ [Bacillus amyloliquefaciens FZB42]
Length = 181
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 132/178 (74%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ +G ++GDGQV+ GQ V MK ARKVR+L G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHNGKSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R+SVELAK+WR DK LR LEAM+++ ++ L+++G G+V+EP+
Sbjct: 64 FEMFEAKLEEYNGNLKRASVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG+YALSA RAL + SA++IA+ A+ IA +ICVYTN I+LE L+
Sbjct: 124 DGILAIGSGGNYALSAGRALKTYAGENLSAKDIAKAALKIAGEICVYTNDQIILEELE 181
>gi|315289637|gb|EFU49030.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 110-3]
Length = 164
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/160 (60%), Positives = 125/160 (78%), Gaps = 1/160 (0%)
Query: 27 VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
+VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L
Sbjct: 1 MVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHL 60
Query: 87 LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +
Sbjct: 61 IKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQA 120
Query: 147 AARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 AARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 160
>gi|167579396|ref|ZP_02372270.1| ATP-dependent protease peptidase subunit [Burkholderia
thailandensis TXDOH]
gi|167617496|ref|ZP_02386127.1| ATP-dependent protease peptidase subunit [Burkholderia
thailandensis Bt4]
gi|257140627|ref|ZP_05588889.1| ATP-dependent protease peptidase subunit [Burkholderia
thailandensis E264]
Length = 178
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T S EI K+++IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKSLAIAGDMCIYTNHNRIIETIE 178
>gi|224501777|ref|ZP_03670084.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
FSL R2-561]
Length = 179
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V+ DG +AGDGQV+LG++V MK A+KVRRL +IAGFAGS ADAF
Sbjct: 1 MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R+SVELA+ WR D LR LEAM+++ DK L+++G G+V+E
Sbjct: 61 TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P+NG++AIGSGG+YAL+A RAL Q A++IAR A+ IA++ICV+TN +I +E L
Sbjct: 121 PDNGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIASEICVFTNDHITVEEL 179
>gi|308173577|ref|YP_003920282.1| two-component ATP-dependent protease [Bacillus amyloliquefaciens
DSM 7]
gi|307606441|emb|CBI42812.1| two-component ATP-dependent protease (N-terminal serine protease)
[Bacillus amyloliquefaciens DSM 7]
gi|328553490|gb|AEB23982.1| ATP-dependent protease subunit HslV [Bacillus amyloliquefaciens
TA208]
gi|328911718|gb|AEB63314.1| two-component ATP-dependent protease (N-terminal serine protease)
[Bacillus amyloliquefaciens LL3]
Length = 181
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 130/178 (73%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ G ++GDGQV+ GQ V MK ARKVR+L G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHKGKSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R+SVELAK+WR DK LR LEAM+++ ++ L+++G G+V+EP+
Sbjct: 64 FEMFEAKLEEYNGNLKRASVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G+MAIGSGG+YALSA RAL + SA++IA A+ IA +ICVYTN I+LE L+
Sbjct: 124 DGIMAIGSGGNYALSAGRALKTYAGENLSAKDIAHAALKIAGEICVYTNDQIILEELE 181
>gi|119943798|ref|YP_941478.1| ATP-dependent protease peptidase subunit [Psychromonas ingrahamii
37]
gi|166222991|sp|A1SQW4|HSLV_PSYIN RecName: Full=ATP-dependent protease subunit HslV
gi|119862402|gb|ABM01879.1| 20S proteasome, A and B subunits [Psychromonas ingrahamii 37]
Length = 184
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 128/176 (72%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VV+ GDGQVSLG TVMK NARKV RL +IAGFAG +ADAFTLLER
Sbjct: 2 TTIVSVRRGNQVVVGGDGQVSLGNTVMKGNARKVHRLYNNQVIAGFAGGTADAFTLLERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L R++VELAKDWR D+ LR LEA++ +ADK + +ITG GDV+ PEN +M
Sbjct: 62 EAKLQAHQGNLERAAVELAKDWRTDRSLRRLEALLAVADKNSSYIITGNGDVVRPENDLM 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG +A SAA AL+ +T A+ I KA++IA +ICV+TN +E + DE
Sbjct: 122 AIGSGGYFAQSAAIALLENTDLDAKTIVEKALAIAGNICVFTNETHTIECIDFSDE 177
>gi|227885326|ref|ZP_04003131.1| ATP-dependent protease peptidase subunit [Escherichia coli 83972]
gi|300819904|ref|ZP_07100088.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 107-1]
gi|300825077|ref|ZP_07105172.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 119-7]
gi|300899910|ref|ZP_07118118.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 198-1]
gi|300919130|ref|ZP_07135667.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 115-1]
gi|300931626|ref|ZP_07146936.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 187-1]
gi|300938384|ref|ZP_07153131.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 21-1]
gi|300948288|ref|ZP_07162403.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 116-1]
gi|300954661|ref|ZP_07167102.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 175-1]
gi|300975843|ref|ZP_07173192.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 45-1]
gi|300986109|ref|ZP_07177723.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 200-1]
gi|301022812|ref|ZP_07186653.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 69-1]
gi|301048654|ref|ZP_07195666.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 185-1]
gi|301303410|ref|ZP_07209534.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 124-1]
gi|301645123|ref|ZP_07245081.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 146-1]
gi|309783875|ref|ZP_07678520.1| ATP-dependent protease hslV [Shigella dysenteriae 1617]
gi|309796645|ref|ZP_07691051.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 145-7]
gi|312971780|ref|ZP_07785954.1| ATP-dependent protease hslV [Escherichia coli 1827-70]
gi|227837702|gb|EEJ48168.1| ATP-dependent protease peptidase subunit [Escherichia coli 83972]
gi|300299521|gb|EFJ55906.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 185-1]
gi|300306417|gb|EFJ60937.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 200-1]
gi|300318372|gb|EFJ68156.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 175-1]
gi|300356538|gb|EFJ72408.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 198-1]
gi|300397361|gb|EFJ80899.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 69-1]
gi|300410196|gb|EFJ93734.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 45-1]
gi|300413764|gb|EFJ97074.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 115-1]
gi|300452189|gb|EFK15809.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 116-1]
gi|300456654|gb|EFK20147.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 21-1]
gi|300460590|gb|EFK24083.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 187-1]
gi|300522429|gb|EFK43498.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 119-7]
gi|300527544|gb|EFK48606.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 107-1]
gi|300841364|gb|EFK69124.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 124-1]
gi|301076550|gb|EFK91356.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 146-1]
gi|308119801|gb|EFO57063.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 145-7]
gi|308928246|gb|EFP73708.1| ATP-dependent protease hslV [Shigella dysenteriae 1617]
gi|310334157|gb|EFQ00362.1| ATP-dependent protease hslV [Escherichia coli 1827-70]
gi|315254305|gb|EFU34273.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 85-1]
gi|315292704|gb|EFU52056.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 153-1]
gi|315298415|gb|EFU57670.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 16-3]
gi|315617727|gb|EFU98332.1| ATP-dependent protease hslV [Escherichia coli 3431]
gi|320175374|gb|EFW50477.1| ATP-dependent protease HslV [Shigella dysenteriae CDC 74-1112]
gi|320180701|gb|EFW55627.1| ATP-dependent protease HslV [Shigella boydii ATCC 9905]
gi|320184936|gb|EFW59720.1| ATP-dependent protease HslV [Shigella flexneri CDC 796-83]
gi|320190968|gb|EFW65618.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC1212]
gi|320196804|gb|EFW71426.1| ATP-dependent protease HslV [Escherichia coli WV_060327]
gi|323153991|gb|EFZ40200.1| ATP-dependent protease hslV [Escherichia coli EPECa14]
gi|323161166|gb|EFZ47083.1| ATP-dependent protease hslV [Escherichia coli E128010]
gi|323167401|gb|EFZ53109.1| ATP-dependent protease hslV [Shigella sonnei 53G]
gi|323174330|gb|EFZ59956.1| ATP-dependent protease hslV [Escherichia coli LT-68]
gi|323182345|gb|EFZ67754.1| ATP-dependent protease hslV [Escherichia coli 1357]
gi|323189646|gb|EFZ74925.1| ATP-dependent protease hslV [Escherichia coli RN587/1]
gi|324006728|gb|EGB75947.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 57-2]
gi|324012499|gb|EGB81718.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 60-1]
gi|324020555|gb|EGB89774.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 117-3]
gi|325499330|gb|EGC97189.1| ATP-dependent protease peptidase subunit [Escherichia fergusonii
ECD227]
gi|326338055|gb|EGD61885.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. 1044]
gi|332084173|gb|EGI89378.1| ATP-dependent protease hslV [Shigella boydii 5216-82]
gi|332085169|gb|EGI90347.1| ATP-dependent protease hslV [Shigella dysenteriae 155-74]
gi|332088327|gb|EGI93447.1| ATP-dependent protease hslV [Shigella boydii 3594-74]
gi|332751578|gb|EGJ81977.1| ATP-dependent protease hslV [Shigella flexneri 4343-70]
gi|332764528|gb|EGJ94760.1| ATP-dependent protease subunit HslV [Shigella flexneri 2930-71]
gi|332997991|gb|EGK17597.1| ATP-dependent protease hslV [Shigella flexneri VA-6]
gi|332998438|gb|EGK18036.1| ATP-dependent protease hslV [Shigella flexneri K-272]
gi|333014131|gb|EGK33488.1| ATP-dependent protease hslV [Shigella flexneri K-227]
Length = 164
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/160 (60%), Positives = 125/160 (78%), Gaps = 1/160 (0%)
Query: 27 VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
+VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L
Sbjct: 1 MVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHL 60
Query: 87 LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +
Sbjct: 61 VKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQA 120
Query: 147 AARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 AARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 160
>gi|147677584|ref|YP_001211799.1| ATP-dependent protease peptidase subunit [Pelotomaculum
thermopropionicum SI]
gi|189028455|sp|A5D2W7|HSLV_PELTS RecName: Full=ATP-dependent protease subunit HslV
gi|146273681|dbj|BAF59430.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Pelotomaculum thermopropionicum SI]
Length = 176
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 139/175 (79%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ VRK G V +AGDGQV+ GQ T++K ARK+RRL K +++AGFAGS ADA TL
Sbjct: 2 FHATTIVAVRKGGKVAVAGDGQVTFGQNTIIKKGARKIRRLYKDSVLAGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAKDWR D+ LR LEA++++ADK L+I+G G+V+EP+
Sbjct: 62 FEKFEGKLEEYHGNLQRAAVELAKDWRTDRILRRLEALLIVADKENLLIISGSGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+GV AIGSGG YAL+AARAL+ T AE+IAR+A+++AA+ICVYTN NI++E L
Sbjct: 122 DGVAAIGSGGPYALAAARALVRHTSMEAEDIAREALAVAAEICVYTNDNIIVERL 176
>gi|309389213|gb|ADO77093.1| ATP dependent peptidase CodWX, CodW component [Halanaerobium
praevalens DSM 2228]
Length = 186
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 131/179 (73%), Gaps = 2/179 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTI+ V+ + + +AGDGQV+LG TVMK+ A+KVRRL G I+AGFAG+SADAFTL
Sbjct: 6 FDATTIVAVKHNSSMALAGDGQVTLGNTVMKSTAKKVRRLYNGKILAGFAGTSADAFTLF 65
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E KLE+Y L R++VELAK+WR DK LR LEA++++AD L+I+G GDV+EP+
Sbjct: 66 EKFEAKLEEYHGSLQRAAVELAKEWRTDKILRKLEALLIVADLDEILIISGNGDVIEPDG 125
Query: 133 GVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
+ AIGSGG YA +AA AL + A EIA +A+ IAA IC+YTN NI LE LK G+
Sbjct: 126 KITAIGSGGPYARAAAIALSDHAQDMKAGEIASEALKIAASICIYTNENISLEELKGGE 184
>gi|89098651|ref|ZP_01171533.1| ATP-dependent protease peptidase subunit [Bacillus sp. NRRL
B-14911]
gi|89086613|gb|EAR65732.1| ATP-dependent protease peptidase subunit [Bacillus sp. NRRL
B-14911]
Length = 180
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 133/178 (74%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI V+ +G +AGDGQV+ G V MK ARKVR+L G +IAGFAGS ADAFT
Sbjct: 3 QFHATTIFAVQHNGKCAMAGDGQVTFGNAVVMKHTARKVRKLFNGKVIAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E +LE+Y L R++VELAK+WR DK LR LEAM+++ +++ L+I+G G+V+EP
Sbjct: 63 LFELFESRLEEYNGNLQRAAVELAKEWRSDKVLRKLEAMLIVMNESDLLLISGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YAL+A R+L +A+EIAR ++ +AA+ICVYTN NI++E L
Sbjct: 123 DDGILAIGSGGNYALAAGRSLKKYAGEHLTAKEIARSSLEVAAEICVYTNENIIVEEL 180
>gi|49081626|gb|AAT50213.1| PA5053 [synthetic construct]
Length = 178
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 137/172 (79%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLHHGQVLAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E++LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EQQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLI 121
Query: 136 AIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
A+GSGG +A +AA AL+ + + SA E+A A++IA ICV+TN N+ +E L
Sbjct: 122 AMGSGGGFAQAAALALLQHNAELSAREVAETALNIAGSICVFTNQNLTIEEL 173
>gi|238926945|ref|ZP_04658705.1| T01 family HslU component of HslUV peptidase [Selenomonas flueggei
ATCC 43531]
gi|238885179|gb|EEQ48817.1| T01 family HslU component of HslUV peptidase [Selenomonas flueggei
ATCC 43531]
Length = 179
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 136/176 (77%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+KDG V +AGDGQV+ G+ +MKANARKVRRL G I+AGFAGS ADAFTL
Sbjct: 3 FHATTIVAVKKDGKVAVAGDGQVTFGERAIMKANARKVRRLYHGKILAGFAGSVADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE Y L R++VELAKDWR DK LR LEA++L+AD+ L+I+G G+V+EP+
Sbjct: 63 FEKFEVKLESYSGNLQRAAVELAKDWRTDKVLRKLEALLLVADQDSILMISGNGEVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG +AL+AARAL++ A IA++++SIAADICVYTNH+I +E L+
Sbjct: 123 GDCTAIGSGGFFALAAARALVAHSALDAPAIAKESLSIAADICVYTNHHITVEVLE 178
>gi|269964740|ref|ZP_06178978.1| ATP-dependent protease HslV [Vibrio alginolyticus 40B]
gi|269830639|gb|EEZ84860.1| ATP-dependent protease HslV [Vibrio alginolyticus 40B]
Length = 183
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ +T A EIA KA++IA DICV+TNH+ +E L
Sbjct: 122 AIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEEL 172
>gi|91226629|ref|ZP_01261353.1| ATP-dependent protease peptidase subunit [Vibrio alginolyticus
12G01]
gi|91189103|gb|EAS75385.1| ATP-dependent protease peptidase subunit [Vibrio alginolyticus
12G01]
Length = 183
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ +T A EIA KA++IA DICV+TNH+ +E L
Sbjct: 122 AIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEEL 172
>gi|152978033|ref|YP_001343662.1| ATP-dependent protease peptidase subunit [Actinobacillus
succinogenes 130Z]
gi|171472944|sp|A6VL80|HSLV_ACTSZ RecName: Full=ATP-dependent protease subunit HslV
gi|150839756|gb|ABR73727.1| 20S proteasome A and B subunits [Actinobacillus succinogenes 130Z]
Length = 173
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 132/172 (76%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG +V K RKVRR KG ++ GFAGS+ADAF LLE
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNSVEKGTVRKVRRTYKGKVVTGFAGSTADAFILLELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++AD+T L+I+G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLVKSAVELAKEWRTERSLRRLEAMMIVADETDFLLISGSGDVIEPEFDVL 121
Query: 136 AIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA SAA AL+ T+N +A EI ++A+++A DI +YTNHN ++E +
Sbjct: 122 AIGSGGNYAKSAALALLRTENNLTAVEIVKEALTVAGDIDIYTNHNHIIEEI 173
>gi|150020135|ref|YP_001305489.1| ATP-dependent protease peptidase subunit [Thermosipho melanesiensis
BI429]
gi|189036248|sp|A6LJK3|HSLV_THEM4 RecName: Full=ATP-dependent protease subunit HslV
gi|149792656|gb|ABR30104.1| 20S proteasome, A and B subunits [Thermosipho melanesiensis BI429]
Length = 176
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+K +TT++ VRK+ VV+ DGQV+ G T+MK NA+KVR++G+GN++AGFAGS ADA
Sbjct: 1 MKWRSTTVVCVRKNDSVVMVSDGQVTYGNTIMKGNAKKVRKMGEGNVLAGFAGSVADAMA 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L +R E K ++ LL+S+VELAKDWR D+ LR LEA++L+ADK T +I+G G+V++P
Sbjct: 61 LFDRFEAKYREWGGNLLKSAVELAKDWRTDRVLRRLEALLLVADKKYTFIISGTGEVIQP 120
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
E+ + +IGSG YA++A RAL+ N SA+EIA +++ IA++IC+YTN N +E L
Sbjct: 121 EDDIASIGSGSPYAIAAGRALLKHTNLSAKEIALESIRIASEICIYTNDNFTIEEL 176
>gi|292670830|ref|ZP_06604256.1| heat shock protein HslVU [Selenomonas noxia ATCC 43541]
gi|292647451|gb|EFF65423.1| heat shock protein HslVU [Selenomonas noxia ATCC 43541]
Length = 182
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 135/176 (76%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V +AGDGQV+ G+ +MKANARKVRRL G I+AGFAGS ADAFTL
Sbjct: 6 FHATTIVAVKKGNKVAVAGDGQVTFGERAIMKANARKVRRLYHGKILAGFAGSVADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE Y L R++VELAKDWR DK LR LEA++L+AD++ L+I+G G+V+EP+
Sbjct: 66 FEKFEVKLESYSGNLQRAAVELAKDWRTDKILRKLEALLLVADQSSILMISGNGEVIEPD 125
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG +AL+AARAL + + A IA++A+SIAADICVYTNHNI +E L+
Sbjct: 126 GDCTAIGSGGFFALAAARALTAHSDMDASAIAKEALSIAADICVYTNHNITVEVLE 181
>gi|117618959|ref|YP_858538.1| ATP-dependent protease peptidase subunit [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|166221620|sp|A0KQI7|HSLV_AERHH RecName: Full=ATP-dependent protease subunit HslV
gi|117560366|gb|ABK37314.1| ATP-dependent protease HslV [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 177
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQVSLG TVMK NARKV RL G ++AGFAG +ADAFTLLER
Sbjct: 2 TTIVSVRRNGQVVIGGDGQVSLGNTVMKGNARKVHRLYNGKVLAGFAGGTADAFTLLERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L R++V LAKDWR D+ LR LEA++ +AD+ + +ITG GDV++PE+ ++
Sbjct: 62 EAKLQAHQGNLERAAVALAKDWRTDRALRRLEALLAVADEHKSFIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T+ A+ I K++ IA DICV+TN N +E L
Sbjct: 122 AIGSGGNFAQSAAIALLENTELDAKSIVEKSLKIAGDICVFTNGNHTIEVL 172
>gi|224476376|ref|YP_002633982.1| ATP-dependent protease peptidase subunit [Staphylococcus carnosus
subsp. carnosus TM300]
gi|254765619|sp|B9DPG5|HSLV_STACT RecName: Full=ATP-dependent protease subunit HslV
gi|222420983|emb|CAL27797.1| ATP-dependent protease HslV [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 179
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 135/175 (77%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI +R++G +AGDGQV+LG Q +MK ARKVRRL G ++AGFAGS ADAFTL
Sbjct: 5 IHATTIFAIRQNGHAAMAGDGQVTLGEQVIMKQTARKVRRLYDGKVLAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+++ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 65 FEKFETKLQEFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKNSILVVSGTGEVISPD 124
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL T+ SA++IA ++ +A++ICV+TN NI++E L
Sbjct: 125 DDLIAIGSGGNYALSAGRALKRHTEMSAKDIAYASLKVASEICVFTNDNIIVEEL 179
>gi|239826607|ref|YP_002949231.1| ATP-dependent protease peptidase subunit [Geobacillus sp. WCH70]
gi|259491389|sp|C5D8V8|HSLV_GEOSW RecName: Full=ATP-dependent protease subunit HslV
gi|239806900|gb|ACS23965.1| 20S proteasome A and B subunits [Geobacillus sp. WCH70]
Length = 180
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 133/178 (74%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI + +G +AGDGQV+ G V MK A+KVRRL +G ++AGFAGS ADAFT
Sbjct: 3 QFHATTIFAIHHNGKAAMAGDGQVTFGNAVVMKHTAKKVRRLFQGKVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KLE++ L R++VELAK+WR DK LR LEAM+++ D+ L+++G G+V+EP
Sbjct: 63 LFEMFEGKLEEFNGNLPRAAVELAKEWRSDKVLRRLEAMLIVMDERHLLLVSGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YAL+A RAL Q SA+EIA+ A+ IAA+ICVYTN +I++E L
Sbjct: 123 DDGILAIGSGGNYALAAGRALKQYAGDQLSAKEIAKAALEIAANICVYTNDHIIVEEL 180
>gi|68070411|ref|XP_677117.1| heat shock protein hslv [Plasmodium berghei strain ANKA]
gi|70936596|ref|XP_739221.1| heat shock protein hslv [Plasmodium chabaudi chabaudi]
gi|56497106|emb|CAH97956.1| heat shock protein hslv, putative [Plasmodium berghei]
gi|56516054|emb|CAH79397.1| heat shock protein hslv, putative [Plasmodium chabaudi chabaudi]
Length = 158
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/159 (59%), Positives = 124/159 (77%), Gaps = 2/159 (1%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
+ GDG VS G ++K NA+K+RRL K NI+ GFAG++AD FTLL++ E K+++YPNQLL
Sbjct: 1 CLIGDGMVSQGTMIVKGNAKKIRRL-KDNILMGFAGATADCFTLLDKFETKIDEYPNQLL 59
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
RS VELAK WR D+YLR+LEA++++ADK L +TG GDVLEP V+ GSGG YA++A
Sbjct: 60 RSCVELAKLWRTDRYLRHLEAVLIVADKDTLLEVTGNGDVLEPSGNVLGTGSGGPYAIAA 119
Query: 148 ARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
ARAL +N SA++IA KAM+IAAD+C +TNHN + ETL
Sbjct: 120 ARALYDIENLSAKDIAYKAMNIAADMCCHTNHNFICETL 158
>gi|205373365|ref|ZP_03226169.1| ATP-dependent protease peptidase subunit [Bacillus coahuilensis
m4-4]
Length = 180
Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 131/178 (73%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI V+ +G ++GDGQV+ G V MK ARKVR+L ++AGFAGS ADAFT
Sbjct: 3 QFHATTIFAVQHNGKSAMSGDGQVTFGNAVVMKHTARKVRKLFHDQVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E +LE+Y L R++VELAK+WR D+ LR LEAM+++ +K +++G G+V+EP
Sbjct: 63 LFEKFEARLEEYNGNLQRAAVELAKEWRTDQVLRKLEAMLIVMNKEHIYLVSGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YALSA RAL +A+EIA+ ++ +AADICVYTNH I+LE L
Sbjct: 123 DDGILAIGSGGNYALSAGRALKKYSGEHMTAKEIAKASLEVAADICVYTNHQIILEEL 180
>gi|85859269|ref|YP_461471.1| ATP-dependent protease peptidase subunit [Syntrophus aciditrophicus
SB]
gi|85722360|gb|ABC77303.1| ATP-dependent endopeptidase hsl proteolytic subunit [Syntrophus
aciditrophicus SB]
Length = 212
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
KM TTI+ V+ G V +AGDGQV+L TVMK ARKVRRL +I GFAG++ADAFTL
Sbjct: 18 KMRGTTIVAVKHKGKVTVAGDGQVTLDVTVMKHGARKVRRLYHDEVIVGFAGTTADAFTL 77
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+R + KLEQY LLR++VEL KDWR D+ LR+LEA+++ + L+I+G GDV+E +
Sbjct: 78 FDRFDSKLEQYNGNLLRAAVELTKDWRTDRILRHLEALMIAVSRDHFLMISGNGDVIESD 137
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
+ VMAIGSGG YAL+AARA++ + A EIAR+A+ IA++IC+YTN NI +E L E
Sbjct: 138 DDVMAIGSGGPYALAAARAMIRYSDLPATEIAREAVQIASEICIYTNDNITVEELDTEQE 197
>gi|254796565|ref|YP_003081401.1| ATP-dependent protease HslV [Neorickettsia risticii str. Illinois]
gi|254589802|gb|ACT69164.1| ATP-dependent protease HslV [Neorickettsia risticii str. Illinois]
Length = 187
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 134/176 (76%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
H TTIL++RK VV+ GDGQV++G V+K+ A+KV+RL G II+GFAGS+ADAFTL
Sbjct: 4 FHGTTILSIRKGDKVVMIGDGQVTMGNAVVVKSTAQKVKRLSNGKIISGFAGSTADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERLE KLE +P QLLRS VELAKDWR DK+LR LEAM+++AD T ++ G GDV+EPE
Sbjct: 64 FERLESKLEAHPGQLLRSCVELAKDWRTDKFLRRLEAMMIVADARGTFILNGAGDVIEPE 123
Query: 132 NGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG+YAL+AA+AL+ ++ A +IA AM IAA ICV+TN N +E +
Sbjct: 124 DSVAAIGSGGNYALAAAKALVVHASDLDAFQIAEAAMKIAAKICVFTNENFTVEVI 179
>gi|226313076|ref|YP_002772970.1| ATP-dependent protease peptidase subunit [Brevibacillus brevis NBRC
100599]
gi|259491384|sp|C0ZFA7|HSLV_BREBN RecName: Full=ATP-dependent protease subunit HslV
gi|226096024|dbj|BAH44466.1| ATP-dependent protease [Brevibacillus brevis NBRC 100599]
Length = 180
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 135/177 (76%), Gaps = 3/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI V+ +G V +AGDGQV+ G + VMK A+KVRRL +G ++AGFAGS ADA T
Sbjct: 3 QFHATTIFAVQHNGSVAMAGDGQVTFGNSMVMKHGAKKVRRLYRGEVLAGFAGSVADAIT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KLE+Y L R++VELAK+WRMDK LR LEAM+++A+K L+I+G G+++EP
Sbjct: 63 LFEKFEGKLEEYHGNLQRAAVELAKEWRMDKILRRLEAMMIVANKEHLLLISGNGEIIEP 122
Query: 131 ENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGGS+AL+A RAL + A EIA ++ AA+ICV+TN+N+V++ L
Sbjct: 123 DDGILAIGSGGSFALAAGRALKTYAPHLGAREIAEASLRTAAEICVFTNNNLVVDEL 179
>gi|146291636|ref|YP_001182060.1| ATP-dependent protease peptidase subunit [Shewanella putrefaciens
CN-32]
gi|152998997|ref|YP_001364678.1| ATP-dependent protease peptidase subunit [Shewanella baltica OS185]
gi|166222999|sp|A6WIH6|HSLV_SHEB8 RecName: Full=ATP-dependent protease subunit HslV
gi|166223001|sp|A4Y2S8|HSLV_SHEPC RecName: Full=ATP-dependent protease subunit HslV
gi|145563326|gb|ABP74261.1| 20S proteasome, A and B subunits [Shewanella putrefaciens CN-32]
gi|151363615|gb|ABS06615.1| 20S proteasome A and B subunits [Shewanella baltica OS185]
Length = 174
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + LLRS+VELAKDWR D+ LR LEAM+++AD +L+ITG GDV++PE ++
Sbjct: 62 EAKLEMHQGHLLRSAVELAKDWRTDRMLRKLEAMLVVADAEASLIITGNGDVVQPEYDLV 121
Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+Y +A L +T+ SA EIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAGDICVFTNQFKTIEEL 172
>gi|145297301|ref|YP_001140142.1| ATP-dependent protease peptidase subunit [Aeromonas salmonicida
subsp. salmonicida A449]
gi|166221621|sp|A4SHM2|HSLV_AERS4 RecName: Full=ATP-dependent protease subunit HslV
gi|142850073|gb|ABO88394.1| ATp-dependent protease HslVU, peptidase subunit HslV [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 177
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQVSLG TVMK NARKV RL G ++AGFAG +ADAFTLLER
Sbjct: 2 TTIVSVRRNGQVVIGGDGQVSLGNTVMKGNARKVHRLYNGKVLAGFAGGTADAFTLLERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L R++V LAKDWR D+ LR LEA++ +AD+ + +ITG GDV++PE ++
Sbjct: 62 EAKLQAHQGNLERAAVALAKDWRTDRALRRLEALLAVADEHKSFIITGNGDVVQPEQDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T+ A+ I K++ IA DICV+TN N +E L
Sbjct: 122 AIGSGGNFAQSAAIALLENTELDAKTIVEKSLKIAGDICVFTNGNHTIEVL 172
>gi|205354332|ref|YP_002228133.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|238065937|sp|B5RF79|HSLV_SALG2 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|205274113|emb|CAR39122.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|326629457|gb|EGE35800.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9]
Length = 176
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYARAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 172
>gi|219681919|ref|YP_002468305.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
5A (Acyrthosiphon pisum)]
gi|219624762|gb|ACL30917.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
5A (Acyrthosiphon pisum)]
Length = 170
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/160 (57%), Positives = 123/160 (76%), Gaps = 1/160 (0%)
Query: 27 VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
VVI GDGQ +LG T+MK+N +K+R L +IAGFAG +ADAFTL E +KKL Y QL
Sbjct: 7 VVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMFDKKLAMYQGQL 66
Query: 87 LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
R+++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PEN ++AIGSGGSYA S
Sbjct: 67 QRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPENDLIAIGSGGSYAQS 126
Query: 147 AARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
+ARAL+ N A +I RK+++IAA+IC+YTNHN ++ L
Sbjct: 127 SARALIENTNLDANQIVRKSLNIAANICIYTNHNFTIKEL 166
>gi|15600246|ref|NP_253740.1| ATP-dependent protease peptidase subunit [Pseudomonas aeruginosa
PAO1]
gi|116053201|ref|YP_793522.1| ATP-dependent protease peptidase subunit [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218894152|ref|YP_002443021.1| ATP-dependent protease peptidase subunit [Pseudomonas aeruginosa
LESB58]
gi|254238240|ref|ZP_04931563.1| heat shock protein HslV [Pseudomonas aeruginosa C3719]
gi|254244065|ref|ZP_04937387.1| heat shock protein HslV [Pseudomonas aeruginosa 2192]
gi|296391900|ref|ZP_06881375.1| ATP-dependent protease peptidase subunit [Pseudomonas aeruginosa
PAb1]
gi|313110091|ref|ZP_07795993.1| heat shock protein HslV [Pseudomonas aeruginosa 39016]
gi|21759208|sp|Q9HUC6|HSLV_PSEAE RecName: Full=ATP-dependent protease subunit HslV
gi|122256784|sp|Q02EW4|HSLV_PSEAB RecName: Full=ATP-dependent protease subunit HslV
gi|226704546|sp|B7V3E6|HSLV_PSEA8 RecName: Full=ATP-dependent protease subunit HslV
gi|9951344|gb|AAG08438.1|AE004918_8 heat shock protein HslV [Pseudomonas aeruginosa PAO1]
gi|115588422|gb|ABJ14437.1| heat shock protein HslV [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170171|gb|EAZ55682.1| heat shock protein HslV [Pseudomonas aeruginosa C3719]
gi|126197443|gb|EAZ61506.1| heat shock protein HslV [Pseudomonas aeruginosa 2192]
gi|218774380|emb|CAW30197.1| heat shock protein HslV [Pseudomonas aeruginosa LESB58]
gi|310882495|gb|EFQ41089.1| heat shock protein HslV [Pseudomonas aeruginosa 39016]
Length = 177
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 137/172 (79%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E++LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EQQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLI 121
Query: 136 AIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
A+GSGG +A +AA AL+ + + SA E+A A++IA ICV+TN N+ +E L
Sbjct: 122 AMGSGGGFAQAAALALLQHNAELSAREVAETALNIAGSICVFTNQNLTIEEL 173
>gi|170785086|pdb|2Z3A|A Chain A, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785087|pdb|2Z3A|B Chain B, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785088|pdb|2Z3A|C Chain C, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785089|pdb|2Z3A|D Chain D, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785090|pdb|2Z3A|E Chain E, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785091|pdb|2Z3A|F Chain F, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785092|pdb|2Z3A|G Chain G, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785093|pdb|2Z3A|H Chain H, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785094|pdb|2Z3A|I Chain I, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785095|pdb|2Z3A|J Chain J, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785096|pdb|2Z3A|K Chain K, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785097|pdb|2Z3A|L Chain L, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785098|pdb|2Z3B|A Chain A, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785099|pdb|2Z3B|B Chain B, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785100|pdb|2Z3B|C Chain C, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785101|pdb|2Z3B|D Chain D, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785102|pdb|2Z3B|E Chain E, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785103|pdb|2Z3B|F Chain F, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785104|pdb|2Z3B|G Chain G, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785105|pdb|2Z3B|H Chain H, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785106|pdb|2Z3B|I Chain I, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785107|pdb|2Z3B|J Chain J, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785108|pdb|2Z3B|K Chain K, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785109|pdb|2Z3B|L Chain L, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
Length = 180
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ G ++GDGQV+ GQ V MK ARKVR+L G ++AGFAGS ADAFTL
Sbjct: 3 FHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAK+WR DK LR LEAM+++ ++ L+++G G+V+EP+
Sbjct: 63 FEKFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG+YAL+A RAL SA EIAR A+ A +ICVYTN I+LE L+
Sbjct: 123 DGILAIGSGGNYALAAGRALKKHAGESMSASEIARAALETAGEICVYTNDQIILEELE 180
>gi|212639573|ref|YP_002316093.1| ATP-dependent protease peptidase subunit [Anoxybacillus
flavithermus WK1]
gi|254802328|sp|B7GGC6|HSLV_ANOFW RecName: Full=ATP-dependent protease subunit HslV
gi|212561053|gb|ACJ34108.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Anoxybacillus flavithermus WK1]
Length = 182
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 133/181 (73%), Gaps = 4/181 (2%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSAD 67
+ + HATTI +R G +AGDGQV+ G V MK ARK+R+L GN++AGFAG+ AD
Sbjct: 2 FMSQFHATTIFAIRHQGKGAMAGDGQVTFGNAVVMKHTARKIRKLFHGNVLAGFAGAVAD 61
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL E E KLE+Y L R++VELAK+WR DK LR LEAM+++ D T L+I+G G+V
Sbjct: 62 AFTLFEMFEGKLEEYNGNLQRAAVELAKEWRSDKVLRRLEAMLIVMDATHLLLISGTGEV 121
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
+EP++G++AIGSGG+YAL+A RAL + +A++IA+ A+ +A+DICVYTN I++E
Sbjct: 122 IEPDDGILAIGSGGNYALAAGRALKAYAGEHLTAKQIAQAALKVASDICVYTNDCIIVEE 181
Query: 185 L 185
L
Sbjct: 182 L 182
>gi|152988750|ref|YP_001351109.1| ATP-dependent protease peptidase subunit [Pseudomonas aeruginosa
PA7]
gi|166222989|sp|A6VDH4|HSLV_PSEA7 RecName: Full=ATP-dependent protease subunit HslV
gi|150963908|gb|ABR85933.1| heat shock protein HslV [Pseudomonas aeruginosa PA7]
Length = 182
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 137/172 (79%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER
Sbjct: 7 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 66
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E++LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 67 EQQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLI 126
Query: 136 AIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
A+GSGG +A +AA AL+ + + SA E+A A++IA ICV+TN N+ +E L
Sbjct: 127 AMGSGGGFAQAAALALLQHNAELSAREVAETALNIAGSICVFTNQNLTIEEL 178
>gi|16078678|ref|NP_389497.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
subtilis str. 168]
gi|221309490|ref|ZP_03591337.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313815|ref|ZP_03595620.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318739|ref|ZP_03600033.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323010|ref|ZP_03604304.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321315381|ref|YP_004207668.1| ATP-dependent protease subunit HslV [Bacillus subtilis BSn5]
gi|729778|sp|P39070|CLPQ_BACSU RecName: Full=ATP-dependent protease subunit ClpQ
gi|73535734|pdb|1YYF|D Chain D, Correction Of X-Ray Intensities From An Hslv-Hslu Co-
Crystal Containing Lattice Translocation Defects
gi|73535735|pdb|1YYF|C Chain C, Correction Of X-Ray Intensities From An Hslv-Hslu Co-
Crystal Containing Lattice Translocation Defects
gi|535349|gb|AAB03370.1| CodW [Bacillus subtilis subsp. subtilis str. JH642]
gi|2633987|emb|CAB13488.1| two-component ATP-dependent protease (N-terminal serine protease)
[Bacillus subtilis subsp. subtilis str. 168]
gi|291484166|dbj|BAI85241.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
natto BEST195]
gi|320021655|gb|ADV96641.1| ATP-dependent protease subunit HslV [Bacillus subtilis BSn5]
Length = 181
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ G ++GDGQV+ GQ V MK ARKVR+L G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAK+WR DK LR LEAM+++ ++ L+++G G+V+EP+
Sbjct: 64 FEKFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG+YAL+A RAL SA EIAR A+ A +ICVYTN I+LE L+
Sbjct: 124 DGILAIGSGGNYALAAGRALKKHAGESMSASEIARAALETAGEICVYTNDQIILEELE 181
>gi|120600431|ref|YP_965005.1| ATP-dependent protease peptidase subunit [Shewanella sp. W3-18-1]
gi|120560524|gb|ABM26451.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella sp. W3-18-1]
Length = 216
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 44 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 103
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + LLRS+VELAKDWR D+ LR LEAM+++AD +L+ITG GDV++PE ++
Sbjct: 104 EAKLEMHQGHLLRSAVELAKDWRTDRMLRKLEAMLVVADAEASLIITGNGDVVQPEYDLV 163
Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+Y +A L +T+ SA EIA K+++IA DICV+TN +E L
Sbjct: 164 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAGDICVFTNQFKTIEEL 214
>gi|330827799|ref|YP_004390751.1| ATP-dependent protease subunit HslV [Aeromonas veronii B565]
gi|328802935|gb|AEB48134.1| ATP-dependent protease subunit HslV [Aeromonas veronii B565]
Length = 177
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQVSLG TVMK NARKV RL G ++AGFAG +ADAFTLLER
Sbjct: 2 TTIVSVRRNGQVVIGGDGQVSLGNTVMKGNARKVHRLYNGKVLAGFAGGTADAFTLLERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L R++V LAKDWR D+ LR LEA++ +AD+ + +ITG GDV++PE+ ++
Sbjct: 62 EAKLQAHQGNLERAAVALAKDWRTDRALRRLEALLAVADEHKSFIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T+ A I K++ IA DICV+TN N +E L
Sbjct: 122 AIGSGGNFAQSAAIALLENTELDARTIVEKSLKIAGDICVFTNGNHTIEVL 172
>gi|310778331|ref|YP_003966664.1| ATP dependent peptidase CodWX, CodW component [Ilyobacter
polytropus DSM 2926]
gi|309747654|gb|ADO82316.1| ATP dependent peptidase CodWX, CodW component [Ilyobacter
polytropus DSM 2926]
Length = 177
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K ATTI+ V+KD V IAGDGQV+ G TV K+ A+K+R++ I+ GFAGS+ADAF L
Sbjct: 3 KFRATTIIAVKKDNKVAIAGDGQVTFGDTVFKSGAKKIRKMYDNTILMGFAGSAADAFAL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E KL+++ L ++SVELAK+WR DK LR LEAM+++ADK+ L+++G GDV+EP+
Sbjct: 63 FDKFEGKLDEFGGNLKKASVELAKEWRHDKALRVLEAMLVVADKSNVLIVSGNGDVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGGSYA +AA+AL M + A ++A +A+ IA ++C+YTN NI +ETL
Sbjct: 123 DGIAAIGSGGSYAYAAAKALVMHSDLGAPQVAEEALKIAGNMCIYTNLNISVETL 177
>gi|303248942|ref|ZP_07335189.1| 20S proteasome A and B subunits [Desulfovibrio fructosovorans JJ]
gi|302489665|gb|EFL49601.1| 20S proteasome A and B subunits [Desulfovibrio fructosovorans JJ]
Length = 179
Score = 197 bits (502), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 129/175 (73%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL VR D V +AGDGQV+LGQ+V MK ARKVRR+ + ++ GFAGS+ADAFTL
Sbjct: 3 LRGTTILAVRTDAGVAVAGDGQVTLGQSVAMKHGARKVRRIYQDKVVIGFAGSTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+R+SVELAKDWR DKYLR LEAM+++AD L+++G GDV+EP+
Sbjct: 63 FERFEAKLEEFSGNLVRASVELAKDWRKDKYLRRLEAMLIVADAGNVLLLSGNGDVIEPD 122
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+GV AIGSGG Y +A L +T EI KAM IA++ICVYTN IV+ET+
Sbjct: 123 DGVAAIGSGGPYALAAARALLRNTDMGPREIVEKAMGIASEICVYTNDRIVVETI 177
>gi|296330830|ref|ZP_06873305.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674348|ref|YP_003866020.1| two-component ATP-dependent protease (N-terminal serine protease)
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296151835|gb|EFG92709.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412592|gb|ADM37711.1| two-component ATP-dependent protease (N-terminal serine protease)
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 181
Score = 197 bits (502), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ G ++GDGQV+ GQ V MK ARKVR+L G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAK+WR DK LR LEAM+++ ++ L+++G G+V+EP+
Sbjct: 64 FEKFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG+YAL+A RAL SA EIAR A+ A +ICVYTN I+LE L+
Sbjct: 124 DGILAIGSGGNYALAAGRALKKHAGDSMSASEIARAALETAGEICVYTNDQIILEELE 181
>gi|323524457|ref|YP_004226610.1| 20S proteasome subunits A/B [Burkholderia sp. CCGE1001]
gi|323381459|gb|ADX53550.1| 20S proteasome A and B subunits [Burkholderia sp. CCGE1001]
Length = 178
Score = 197 bits (502), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +TQ S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALADNTQLSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|88813055|ref|ZP_01128297.1| ATP-dependent protease peptidase subunit [Nitrococcus mobilis
Nb-231]
gi|88789688|gb|EAR20813.1| ATP-dependent protease peptidase subunit [Nitrococcus mobilis
Nb-231]
Length = 180
Score = 197 bits (502), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI+ +R++G V+ GDGQV+LG TVMK NARKVRRL G+I+AGFAG +ADAFTL
Sbjct: 3 QFQGTTIIALRRNGRAVVGGDGQVTLGDTVMKGNARKVRRLFHGHILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E +LE++ L R++VE+AKDWR D+ LR LEA++++A+ L+++G GDV+EPE
Sbjct: 63 FERFEGQLEKHRGNLTRAAVEMAKDWRSDRVLRRLEALLVVANTESLLMLSGNGDVVEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+ ++AIGSGG+YA +AA AL+ +TQ SA EI ++++IAADIC+YTNH++ +E L G
Sbjct: 123 HDLIAIGSGGAYAQAAATALLENTQLSAREIVERSLNIAADICIYTNHHLAIEELGAG 180
>gi|224373290|ref|YP_002607662.1| ATP-dependent protease peptidase subunit [Nautilia profundicola
AmH]
gi|223589415|gb|ACM93151.1| peptidase, T1 family [Nautilia profundicola AmH]
Length = 182
Score = 197 bits (502), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 127/172 (73%), Gaps = 2/172 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ M ATTIL +KDGV VI GDGQV+ G TV+K NA K+R L G ++AGFAGS+ADAF
Sbjct: 3 INMEATTILGYKKDGVAVIGGDGQVTFGHTVLKGNATKIRTLYNGKVLAGFAGSTADAFI 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L + EK LE L++S ++ K WR DKYLR LEAM+++ ++ +++G GDV+EP
Sbjct: 63 LFDMFEKNLENRKGDLVKSVIDFGKAWRQDKYLRRLEAMMIVLNQKHIFILSGNGDVVEP 122
Query: 131 ENGVM-AIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI 180
E+G + AIGSGG+YA+SAARAL+ N S EE+ ++++ IAAD+C+YTNHNI
Sbjct: 123 EDGELAAIGSGGNYAISAARALVKHSNLSPEELVKESLHIAADLCIYTNHNI 174
>gi|258645672|ref|ZP_05733141.1| ATP-dependent protease HslVU, peptidase subunit [Dialister invisus
DSM 15470]
gi|260403039|gb|EEW96586.1| ATP-dependent protease HslVU, peptidase subunit [Dialister invisus
DSM 15470]
Length = 177
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 131/173 (75%), Gaps = 2/173 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
ATTIL V+KDG +AGDGQV++G V MK ARKVRRL G +IAGFAGS ADAF L +
Sbjct: 4 ATTILAVKKDGHTAVAGDGQVTMGSAVVMKNTARKVRRLYHGKVIAGFAGSVADAFALFD 63
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
+ E KL L+R++VE AK+WR D+ L+ LEA++++ D +++G G+V+EP++G
Sbjct: 64 KFEGKLSDCNGNLVRAAVEFAKEWRRDRVLQKLEALLIMTDGDHLFLVSGSGEVIEPDDG 123
Query: 134 VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
++AIGSGG+YAL+AARAL S + SA EIA +++ +AADICVYTNHN+++E +
Sbjct: 124 ILAIGSGGNYALAAARALCSVSDLSAREIAEQSLHVAADICVYTNHNVIVEEI 176
>gi|289434562|ref|YP_003464434.1| ATP-dependent protease HslV/ClpQ [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289170806|emb|CBH27348.1| ATP-dependent protease HslV/ClpQ [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 181
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V+ DG +AGDGQV+LG++V MK A+KVRRL +IAGFAGS ADAF
Sbjct: 3 MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R+SVELA+ WR D LR LEAM+++ DK L+++G G+V+E
Sbjct: 63 TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 122
Query: 130 PENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGG+YAL+A RAL Q A++IAR A+ IA++ICV+TN +I +E L
Sbjct: 123 PDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIASEICVFTNDHITVEEL 181
>gi|239994472|ref|ZP_04714996.1| ATP-dependent protease peptidase subunit [Alteromonas macleodii
ATCC 27126]
Length = 160
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 125/158 (79%), Gaps = 1/158 (0%)
Query: 29 IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
+AGDGQVSLG TVMK NARKVRRL I+AGFAG +ADAFTL ER E KLE + L +
Sbjct: 1 MAGDGQVSLGNTVMKGNARKVRRLYHDKILAGFAGGTADAFTLFERFEAKLEAHQGHLTK 60
Query: 89 SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA 148
++VELAKDWR D+ LR LEA++ +AD+T + +ITG GDV++PE ++AIGSGG+YA +AA
Sbjct: 61 AAVELAKDWRTDRALRKLEALLAVADETASFIITGNGDVVQPEQDLIAIGSGGNYAQAAA 120
Query: 149 RALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AL+ +T+ SA+EIA KA++IA DICV+TNH+ ++ L
Sbjct: 121 TALLENTELSAKEIAEKALTIAGDICVFTNHSQTVDVL 158
>gi|16803318|ref|NP_464803.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
EGD-e]
gi|46907505|ref|YP_013894.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
serotype 4b str. F2365]
gi|47097539|ref|ZP_00235076.1| ATP-dependent protease HslV [Listeria monocytogenes str. 1/2a
F6854]
gi|116872711|ref|YP_849492.1| ATP-dependent protease peptidase subunit [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|217964579|ref|YP_002350257.1| ATP-dependent protease HslV [Listeria monocytogenes HCC23]
gi|224499051|ref|ZP_03667400.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
Finland 1988]
gi|226223881|ref|YP_002757988.1| beta-type subunit of the 20S proteasome [Listeria monocytogenes
Clip81459]
gi|254824661|ref|ZP_05229662.1| ATP-dependent protease hslV [Listeria monocytogenes FSL J1-194]
gi|254828641|ref|ZP_05233328.1| ATP-dependent protease hslV [Listeria monocytogenes FSL N3-165]
gi|254829965|ref|ZP_05234620.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
10403S]
gi|254852668|ref|ZP_05242016.1| clpQ [Listeria monocytogenes FSL R2-503]
gi|254898557|ref|ZP_05258481.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
J0161]
gi|254911952|ref|ZP_05261964.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
J2818]
gi|254932405|ref|ZP_05265764.1| hslV [Listeria monocytogenes HPB2262]
gi|254936279|ref|ZP_05267976.1| hslV [Listeria monocytogenes F6900]
gi|254994003|ref|ZP_05276193.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
FSL J2-064]
gi|255016910|ref|ZP_05289036.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
FSL F2-515]
gi|255026830|ref|ZP_05298816.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
FSL J2-003]
gi|255520260|ref|ZP_05387497.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
FSL J1-175]
gi|284801663|ref|YP_003413528.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
08-5578]
gi|284994805|ref|YP_003416573.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
08-5923]
gi|290894168|ref|ZP_06557139.1| hslV protein [Listeria monocytogenes FSL J2-071]
gi|300765314|ref|ZP_07075298.1| ATP-dependent protease HslV [Listeria monocytogenes FSL N1-017]
gi|315282102|ref|ZP_07870588.1| ATP-dependent protease HslVU, peptidase subunit [Listeria marthii
FSL S4-120]
gi|21759170|sp|Q8Y7J9|HSLV_LISMO RecName: Full=ATP-dependent protease subunit HslV
gi|85542204|sp|Q720E3|HSLV_LISMF RecName: Full=ATP-dependent protease subunit HslV
gi|123463736|sp|A0AI81|HSLV_LISW6 RecName: Full=ATP-dependent protease subunit HslV
gi|254802416|sp|B8DG53|HSLV_LISMH RecName: Full=ATP-dependent protease subunit HslV
gi|259491393|sp|C1L2I6|HSLV_LISMC RecName: Full=ATP-dependent protease subunit HslV
gi|16410694|emb|CAC99356.1| clpQ [Listeria monocytogenes EGD-e]
gi|46880773|gb|AAT04071.1| ATP-dependent protease HslV [Listeria monocytogenes serotype 4b
str. F2365]
gi|47014087|gb|EAL05083.1| ATP-dependent protease HslV [Listeria monocytogenes str. 1/2a
F6854]
gi|116741589|emb|CAK20713.1| ATP-dependent protease [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|217333849|gb|ACK39643.1| ATP-dependent protease HslV [Listeria monocytogenes HCC23]
gi|225876343|emb|CAS05052.1| Putative beta-type subunit of the 20S proteasome [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258601040|gb|EEW14365.1| ATP-dependent protease hslV [Listeria monocytogenes FSL N3-165]
gi|258605986|gb|EEW18594.1| clpQ [Listeria monocytogenes FSL R2-503]
gi|258608868|gb|EEW21476.1| hslV [Listeria monocytogenes F6900]
gi|284057225|gb|ADB68166.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
08-5578]
gi|284060272|gb|ADB71211.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
08-5923]
gi|290556298|gb|EFD89841.1| hslV protein [Listeria monocytogenes FSL J2-071]
gi|293583962|gb|EFF95994.1| hslV [Listeria monocytogenes HPB2262]
gi|293589914|gb|EFF98248.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
J2818]
gi|293593900|gb|EFG01661.1| ATP-dependent protease hslV [Listeria monocytogenes FSL J1-194]
gi|300513997|gb|EFK41060.1| ATP-dependent protease HslV [Listeria monocytogenes FSL N1-017]
gi|307570857|emb|CAR84036.1| ATP-dependent Clp protease, peptidase subunit [Listeria
monocytogenes L99]
gi|313609075|gb|EFR84789.1| ATP-dependent protease HslVU, peptidase subunit [Listeria
monocytogenes FSL F2-208]
gi|313614254|gb|EFR87912.1| ATP-dependent protease HslVU, peptidase subunit [Listeria marthii
FSL S4-120]
gi|313633458|gb|EFS00283.1| ATP-dependent protease HslVU, peptidase subunit [Listeria seeligeri
FSL N1-067]
gi|313638153|gb|EFS03410.1| ATP-dependent protease HslVU, peptidase subunit [Listeria seeligeri
FSL S4-171]
gi|328468567|gb|EGF39567.1| ATP-dependent protease subunit HslV [Listeria monocytogenes 1816]
gi|328475122|gb|EGF45906.1| ATP-dependent protease subunit HslV [Listeria monocytogenes 220]
gi|332311723|gb|EGJ24818.1| ATP-dependent protease subunit HslV [Listeria monocytogenes str.
Scott A]
Length = 179
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V+ DG +AGDGQV+LG++V MK A+KVRRL +IAGFAGS ADAF
Sbjct: 1 MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R+SVELA+ WR D LR LEAM+++ DK L+++G G+V+E
Sbjct: 61 TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGG+YAL+A RAL Q A++IAR A+ IA++ICV+TN +I +E L
Sbjct: 121 PDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIASEICVFTNDHITVEEL 179
>gi|285019334|ref|YP_003377045.1| peptidase component of the hsluv protease [Xanthomonas albilineans
GPE PC73]
gi|283474552|emb|CBA17053.1| probable peptidase component of the hsluv protease protein
[Xanthomonas albilineans]
Length = 183
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 141/175 (80%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
HATTIL+VR+DG V +AGDGQV+LG TVMK NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 FHATTILSVRRDGRVAVAGDGQVTLGHTVMKGNARKVRRLGRDGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y QL R++VELAKDWR ++ L LEA++ +AD+ +L+I G GDV+EPE
Sbjct: 70 FELFEAKLEKY-GQLTRAAVELAKDWRTERRLGKLEALLAVADQETSLIIGGTGDVIEPE 128
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSYALSAARAL+ T A IA +A++IA DIC+YTN N+V+E L
Sbjct: 129 DGIIAIGSGGSYALSAARALLGHTSLDARTIAVEALNIAGDICIYTNRNVVVEEL 183
>gi|32491027|ref|NP_871281.1| ATP-dependent protease peptidase subunit [Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis]
gi|31340163|sp|Q8D2S6|HSLV_WIGBR RecName: Full=ATP-dependent protease subunit HslV
gi|25166233|dbj|BAC24424.1| hslV [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 180
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 128/171 (74%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G +VI GDGQ +LG T+MK N +KVR L +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHIVIGGDGQATLGNTIMKNNVKKVRTLYNDTVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKL+ + + ++S+VELAKDWR D+ LR LEA++ +ADK +L+ITG DV++PE+ V+
Sbjct: 62 EKKLQIHQGRFVKSAVELAKDWRTDRMLRRLEALLAVADKNTSLIITGNADVIQPESDVI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T A +I RK++ I+ DIC+Y+NH E L
Sbjct: 122 AIGSGGPYAQSAARALLENTDLCARDIVRKSLQISGDICLYSNHFFSFEEL 172
>gi|300921946|ref|ZP_07138095.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 182-1]
gi|301328292|ref|ZP_07221408.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 78-1]
gi|300421670|gb|EFK04981.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 182-1]
gi|300845254|gb|EFK73014.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 78-1]
Length = 164
Score = 197 bits (501), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 124/160 (77%), Gaps = 1/160 (0%)
Query: 27 VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
+VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L
Sbjct: 1 MVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHL 60
Query: 87 LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +
Sbjct: 61 VKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQA 120
Query: 147 AARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
A RAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 AVRALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 160
>gi|323489573|ref|ZP_08094800.1| ATP-dependent protease subunit HslV [Planococcus donghaensis
MPA1U2]
gi|323396704|gb|EGA89523.1| ATP-dependent protease subunit HslV [Planococcus donghaensis
MPA1U2]
Length = 181
Score = 197 bits (501), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 127/178 (71%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI VR +G ++GDGQV+ G V MK ARKVR+L G ++ GFAGS ADAFT
Sbjct: 3 EFHATTIFAVRHNGQCAMSGDGQVTFGNAVVMKHTARKVRKLYNGQVLTGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KL +Y L R++VELAK WR DK LR LEAM++I +K L+++G G+V+EP
Sbjct: 63 LFEMFEGKLTEYNGNLQRAAVELAKQWRGDKMLRQLEAMLIIMNKDELLLVSGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YAL+A RAL +A EIA+ A+ AADICVYTNH IV+E L
Sbjct: 123 DDGILAIGSGGNYALAAGRALKKFAGDHFTASEIAKSALETAADICVYTNHQIVVEEL 180
>gi|108762078|ref|YP_631221.1| ATP-dependent protease peptidase subunit [Myxococcus xanthus DK
1622]
gi|47605682|sp|Q84F94|HSLV_MYXXA RecName: Full=ATP-dependent protease subunit HslV
gi|123074376|sp|Q1D802|HSLV_MYXXD RecName: Full=ATP-dependent protease subunit HslV
gi|27804890|gb|AAO22924.1| HslV-like protein [Myxococcus xanthus]
gi|108465958|gb|ABF91143.1| heat shock protein HslVU, ATP-dependent protease HslV [Myxococcus
xanthus DK 1622]
Length = 175
Score = 197 bits (501), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL VR+DG V IA DGQVSL +TVMK A+KVRRLG+G ++AGFAGS+ADAFTL
Sbjct: 2 FHGTTILCVRRDGKVAIASDGQVSLEKTVMKNTAKKVRRLGEGQVLAGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KL+++ + R+ VEL KDWR D++LR LEA++++ADK T +++G GDV+EP+
Sbjct: 62 ERFEAKLKEHQKNMARACVELGKDWRTDRFLRRLEALLIVADKEKTFILSGAGDVIEPDY 121
Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ A+GSGG Y +A + TQ SA ++ ++++IA +I +YTN NI +E L
Sbjct: 122 GIAAVGSGGPYAFAAARALMAHTQMSARDVVHQSLTIAGEIDIYTNANISIEEL 175
>gi|160866756|gb|ABX23379.1| hypothetical protein SARI_03564 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 164
Score = 197 bits (501), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 124/160 (77%), Gaps = 1/160 (0%)
Query: 27 VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
+VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L
Sbjct: 1 MVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHL 60
Query: 87 LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +
Sbjct: 61 VKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQA 120
Query: 147 AARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 AARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 160
>gi|300906260|ref|ZP_07123969.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 84-1]
gi|300401941|gb|EFJ85479.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 84-1]
Length = 164
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 125/160 (78%), Gaps = 1/160 (0%)
Query: 27 VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
+VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KL+ + L
Sbjct: 1 MVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLKMHQGHL 60
Query: 87 LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +
Sbjct: 61 VKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQA 120
Query: 147 AARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 AARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 160
>gi|295399803|ref|ZP_06809784.1| 20S proteasome A and B subunits [Geobacillus thermoglucosidasius
C56-YS93]
gi|312111685|ref|YP_003990001.1| 20S proteasome A and subunit betas [Geobacillus sp. Y4.1MC1]
gi|294978206|gb|EFG53803.1| 20S proteasome A and B subunits [Geobacillus thermoglucosidasius
C56-YS93]
gi|311216786|gb|ADP75390.1| 20S proteasome A and B subunits [Geobacillus sp. Y4.1MC1]
Length = 180
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 132/178 (74%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI + +G +AGDGQV+ G V MK A+KVRRL +G ++AGFAGS ADAFT
Sbjct: 3 QFHATTIFAIHHNGKAAMAGDGQVTFGNAVVMKHTAKKVRRLFQGKVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KLE++ L R++VELAK+WR DK LR LEAM+++ D L+I+G G+V+EP
Sbjct: 63 LFEMFEGKLEEFNGNLPRAAVELAKEWRSDKVLRRLEAMLIVMDARHLLLISGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YAL+A RAL Q SA+EIA+ A+ IAA+ICVYTN +I++E L
Sbjct: 123 DDGMLAIGSGGNYALAAGRALKQYAGDQLSAKEIAKAALEIAANICVYTNGHIIVEEL 180
>gi|138894734|ref|YP_001125187.1| ATP-dependent protease peptidase subunit [Geobacillus
thermodenitrificans NG80-2]
gi|196247645|ref|ZP_03146347.1| 20S proteasome A and B subunits [Geobacillus sp. G11MC16]
gi|166222977|sp|A4IM88|HSLV_GEOTN RecName: Full=ATP-dependent protease subunit HslV
gi|134266247|gb|ABO66442.1| ATP-dependent protease HslV [Geobacillus thermodenitrificans
NG80-2]
gi|196212429|gb|EDY07186.1| 20S proteasome A and B subunits [Geobacillus sp. G11MC16]
Length = 180
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 129/177 (72%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI +R +G +AGDGQV+ G V MK A+KVRRL G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAIRHNGAAAMAGDGQVTFGNAVVMKHTAKKVRRLFHGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLEQ+ L R++VELAK+WR +K LR LEAM+++ D L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEQFNGNLPRAAVELAKEWRSNKVLRRLEAMLIVMDGQHLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG YAL+A RAL +A+EIA+ A+ IAADICVYTN +I++E L
Sbjct: 124 DGMLAIGSGGHYALAAGRALKQYAGASMTAKEIAKAALEIAADICVYTNGHIIVEEL 180
>gi|313674855|ref|YP_004052851.1| ATP dependent peptidase codwx, codw component [Marivirga tractuosa
DSM 4126]
gi|312941553|gb|ADR20743.1| ATP dependent peptidase CodWX, CodW component [Marivirga tractuosa
DSM 4126]
Length = 180
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 128/177 (72%), Gaps = 3/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TT+ V G V I DGQ ++G TV K+N +K+R+L G I+ GFAGS+ADAF L
Sbjct: 3 KIRSTTVCAVVHKGQVAIGADGQATMGNTVAKSNVKKIRKLQDGKIVTGFAGSTADAFNL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LE+ ++KL + + RS++ELAK+WR D+YLR LEAM+++ADK L+I+G GDVLEP+
Sbjct: 63 LEKFDEKLNAFGGNMKRSAIELAKEWRTDRYLRKLEAMMIVADKDEVLIISGTGDVLEPD 122
Query: 132 NGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
N + IGSG YA SAA AL SAE+I R+++ IAADIC+YTNHN+V+ET+
Sbjct: 123 NQIATIGSGSMYAQSAATALKKHAGDKLSAEDIVRESLHIAADICIYTNHNLVVETI 179
>gi|160872089|ref|ZP_02062221.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Rickettsiella grylli]
gi|159120888|gb|EDP46226.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Rickettsiella grylli]
Length = 185
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 133/175 (76%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+H TTIL VR++ VVI GDGQV+LG V+K NARKVR+L G ++ GFAG++ADAFTL
Sbjct: 4 LHGTTILLVRRNDKVVIGGDGQVTLGNAIVLKGNARKVRKLYDGQVLVGFAGATADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ER E KL++ +L R+SVELAKDWR D+ LR LEAM+ +ADK + +++G GDV+EPE
Sbjct: 64 IERFENKLKECNGRLDRASVELAKDWRSDRVLRRLEAMLAVADKEKSFMLSGNGDVIEPE 123
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YA SAA AL +T+ SA I K++ IAADICV+TNH +E +
Sbjct: 124 HDLIAIGSGGAYAQSAALALFQNTKLSARSIVEKSLMIAADICVFTNHQRSIEEI 178
>gi|239908472|ref|YP_002955214.1| ATP-dependent protease HslV [Desulfovibrio magneticus RS-1]
gi|259491386|sp|C4XN25|HSLV_DESMR RecName: Full=ATP-dependent protease subunit HslV
gi|239798339|dbj|BAH77328.1| ATP-dependent protease HslV [Desulfovibrio magneticus RS-1]
Length = 181
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 135/178 (75%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTI+ VR + V +AGDGQV+LGQ + +K ARKVRR+ K ++ GFAG++ADAF
Sbjct: 1 MQLRGTTIVAVRTEAGVAVAGDGQVTLGQAIAVKHTARKVRRMYKDKVVIGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER E KLE++ L+R+SVELAKDWR DKYLR LEAM+++AD L+++G GDV+E
Sbjct: 61 TLFERFEAKLEEFGGNLVRASVELAKDWRKDKYLRRLEAMMIVADAGNVLILSGTGDVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P++GV AIGSGG Y +A L +T+ SA EI K+M+IAA++CVYTN +V+ETL+
Sbjct: 121 PDDGVAAIGSGGPYAMAAARALLRNTELSAREIVEKSMAIAAEMCVYTNDQLVVETLE 178
>gi|157084475|gb|ABV14153.1| hypothetical protein CKO_03062 [Citrobacter koseri ATCC BAA-895]
Length = 164
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 124/160 (77%), Gaps = 1/160 (0%)
Query: 27 VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
+VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L
Sbjct: 1 MVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHL 60
Query: 87 LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +
Sbjct: 61 VKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVIQPENDLIAIGSGGPYAQA 120
Query: 147 AARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 AARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 160
>gi|319649573|ref|ZP_08003729.1| ATP-dependent protease peptidase subunit [Bacillus sp. 2_A_57_CT2]
gi|317398735|gb|EFV79417.1| ATP-dependent protease peptidase subunit [Bacillus sp. 2_A_57_CT2]
Length = 180
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 130/178 (73%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI V +G ++GDGQV+ G V MK ARKVR+L G ++AGFAGS ADAFT
Sbjct: 3 EFHATTIFAVHHNGECAMSGDGQVTFGNAVVMKHTARKVRKLFNGKVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KLE+Y L R++VELAK+WR DK LR LEAM+++ + L+I+G G+V+EP
Sbjct: 63 LFEMFEGKLEEYNGNLERAAVELAKEWRSDKVLRKLEAMLIVMNTDSLLLISGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YAL+A R+L SA EIA+ ++ +AA+ICVYTNHNI++E L
Sbjct: 123 DDGILAIGSGGNYALAAGRSLKRFAGEHLSAREIAKASLEMAAEICVYTNHNIIVEEL 180
>gi|170734441|ref|YP_001766388.1| ATP-dependent protease peptidase subunit [Burkholderia cenocepacia
MC0-3]
gi|254246900|ref|ZP_04940221.1| protease HslVU, subunit HslV [Burkholderia cenocepacia PC184]
gi|238065814|sp|B1K0G1|HSLV_BURCC RecName: Full=ATP-dependent protease subunit HslV
gi|124871676|gb|EAY63392.1| protease HslVU, subunit HslV [Burkholderia cenocepacia PC184]
gi|169817683|gb|ACA92266.1| 20S proteasome A and B subunits [Burkholderia cenocepacia MC0-3]
Length = 178
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL+ +T+ S EI K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALVENTELSPREIVEKSLGIAGDMCIYTNHNRIIETIE 178
>gi|94967245|ref|YP_589293.1| ATP-dependent protease peptidase subunit [Candidatus Koribacter
versatilis Ellin345]
gi|189043926|sp|Q1IV81|HSLV_ACIBL RecName: Full=ATP-dependent protease subunit HslV
gi|94549295|gb|ABF39219.1| ATP dependent peptidase CodWX, CodW component [Candidatus
Koribacter versatilis Ellin345]
Length = 180
Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 130/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ +TT+L VR+DG VV+A DGQV+LG+ V+K NARK+RRL + IIAGFAGS+ADAF+L
Sbjct: 7 VRSTTVLCVRRDGKVVMAADGQVTLGEGVIKHNARKLRRLYQDKIIAGFAGSTADAFSLF 66
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
R E KLEQY L R++VEL KDWR DK LR LEA++L+ADK T +I+G GDV+EP+
Sbjct: 67 GRFESKLEQYHGNLSRAAVELGKDWRTDKMLRQLEALLLVADKDQTFLISGQGDVIEPDT 126
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ AIGSGGSYA +AA AL+ A +IA +AM IA IC+YTN + +E L
Sbjct: 127 GIAAIGSGGSYATAAATALLEHSTLDARQIAEEAMKIAGKICIYTNDRVTIEEL 180
>gi|110597420|ref|ZP_01385707.1| 20S proteasome, A and B subunits [Chlorobium ferrooxidans DSM
13031]
gi|110340964|gb|EAT59435.1| 20S proteasome, A and B subunits [Chlorobium ferrooxidans DSM
13031]
Length = 182
Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 133/172 (77%), Gaps = 1/172 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ +TT++ V +DG + DGQ++LG TV+K + RK+RRL +G +IAGFAG++ADA TLL
Sbjct: 9 IRSTTVIGVLRDGKAALGSDGQMTLGNTVIKHSTRKIRRLYQGKLIAGFAGATADAVTLL 68
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+R E+KLE Y +L R++VELAK+WR DKYLR LEAM+ I L+I+G GDV+EPE+
Sbjct: 69 DRFEEKLEAYNGKLDRAAVELAKEWRTDKYLRRLEAMLAIVSSDKALIISGTGDVIEPED 128
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLE 183
G++AIGSG YALSAARALM + SA +I ++++ IA+DIC+YTN +I++E
Sbjct: 129 GIVAIGSGSMYALSAARALMKHSSLSARDIVQESLKIASDICIYTNDHIIVE 180
>gi|156935934|ref|YP_001439850.1| ATP-dependent protease peptidase subunit [Cronobacter sakazakii
ATCC BAA-894]
gi|156534188|gb|ABU79014.1| hypothetical protein ESA_03828 [Cronobacter sakazakii ATCC BAA-894]
Length = 170
Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 127/166 (76%), Gaps = 1/166 (0%)
Query: 21 VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
+R++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE
Sbjct: 1 MRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLE 60
Query: 81 QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSG 140
+ L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSG
Sbjct: 61 MHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVVQPENDLIAIGSG 120
Query: 141 GSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G YA +AARAL+ +T+ A +I K++ IA DIC+YTNH + +E L
Sbjct: 121 GPYAQAAARALLENTELGARDIVEKSLGIAGDICIYTNHFLTIEEL 166
>gi|294500945|ref|YP_003564645.1| ATP-dependent protease HslV [Bacillus megaterium QM B1551]
gi|295706291|ref|YP_003599366.1| ATP-dependent protease HslV [Bacillus megaterium DSM 319]
gi|294350882|gb|ADE71211.1| ATP-dependent protease HslV [Bacillus megaterium QM B1551]
gi|294803950|gb|ADF41016.1| ATP-dependent protease HslV [Bacillus megaterium DSM 319]
Length = 180
Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 131/177 (74%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ +G ++GDGQV+ G VMK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHNGQCAMSGDGQVTFGNAVVMKHTARKVRRLFQGQVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VELAK WR DK LR LEAM+++ +K L+++G G+V+EP+
Sbjct: 64 FELFETKLEEYNGNLQRAAVELAKQWRSDKVLRKLEAMLIVMNKDNLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA RAL +A+EIA+ A+ +A++ICVYTN +I++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQHAGEHLTAKEIAKAALDVASEICVYTNDHIIVEEL 180
>gi|325118172|emb|CBZ53723.1| putative heat shock protein hslv [Neospora caninum Liverpool]
Length = 382
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 136/218 (62%), Gaps = 41/218 (18%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ HATTIL VRK V +AGDG VS GQ ++K NARK+RRL G +I GFAG++AD
Sbjct: 135 FVPPRHATTILCVRKGDQVCVAGDGMVSQGQMIVKPNARKIRRLQDG-VICGFAGATADC 193
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE--------------------- 107
FTLLE+LE KLE+YP QLLRS VELAK WR D+YLR+LE
Sbjct: 194 FTLLEKLEAKLEEYPGQLLRSCVELAKQWRTDRYLRHLEVGQQKRSKKHEDLFPELHKDT 253
Query: 108 ------------------AMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAAR 149
A++++ADK ++L ++G+GDVLE +G++ +GSGG YA++AAR
Sbjct: 254 KDCLASKCVLSSNPRQSRAVLIVADKKMSLEVSGVGDVLESHDGILGVGSGGPYAVAAAR 313
Query: 150 ALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
AL SA EI +++M+IAA +C +TN ++ E L+
Sbjct: 314 ALYDIDGLSAHEICKRSMAIAASMCCHTNDRVIFEVLE 351
>gi|222151086|ref|YP_002560240.1| heat shock protein HslV [Macrococcus caseolyticus JCSC5402]
gi|254802417|sp|B9EBD3|HSLV_MACCJ RecName: Full=ATP-dependent protease subunit HslV
gi|222120209|dbj|BAH17544.1| heat shock protein HslV [Macrococcus caseolyticus JCSC5402]
Length = 180
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 133/177 (75%), Gaps = 3/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
++HATTI +R +G ++GDGQV+LGQ V MK ARKVRRL ++AGFAGS ADAFT
Sbjct: 4 QLHATTIFAIRHNGRAAMSGDGQVTLGQQVIMKQTARKVRRLFNDEVVAGFAGSVADAFT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KL +Y L R++VELAK+WR DK LR LEAM+++ +K LV++G G+V++P
Sbjct: 64 LFEMFEAKLYEYNGNLSRAAVELAKEWRGDKMLRQLEAMLIVMNKDELLVVSGTGEVIQP 123
Query: 131 ENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++ ++AIGSGG+YALSA RAL ++ SA +IA+ ++ AADICV+TNHNI++E +
Sbjct: 124 DDDIIAIGSGGNYALSAGRALKRHASTLSARDIAQASLETAADICVFTNHNIIIEEI 180
>gi|260655110|ref|ZP_05860598.1| ATP-dependent protease HslVU, peptidase subunit [Jonquetella
anthropi E3_33 E1]
gi|260630221|gb|EEX48415.1| ATP-dependent protease HslVU, peptidase subunit [Jonquetella
anthropi E3_33 E1]
Length = 186
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 134/174 (77%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TTI+ VRKDG V +AGDGQ+++G ++KA KVRRL K +++ GFAG++ADA TL+
Sbjct: 13 IHGTTIVCVRKDGSVAMAGDGQMTMGSQILKAGTVKVRRLYKDSVLVGFAGTTADAMTLM 72
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ L+KKLE+Y LLR++VEL K WR D+ LR+LEAM+L AD+ T++I+G GDV+EPEN
Sbjct: 73 DLLDKKLEEYSGNLLRAAVELTKTWRTDRMLRHLEAMMLAADREHTVLISGAGDVVEPEN 132
Query: 133 GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG +AL+A+RAL M + A++IA A+ IA++IC+YT+ I +E L
Sbjct: 133 DVAAIGSGGGFALAASRALMMGSSYDAKKIAETAIRIASEICIYTDDKITVEVL 186
>gi|315302917|ref|ZP_07873650.1| ATP-dependent protease HslVU, peptidase subunit [Listeria ivanovii
FSL F6-596]
gi|313628713|gb|EFR97113.1| ATP-dependent protease HslVU, peptidase subunit [Listeria ivanovii
FSL F6-596]
Length = 181
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 131/179 (73%), Gaps = 4/179 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V DG +AGDGQV+LG++V MK A+KVRRL +IAGFAGS ADAF
Sbjct: 3 MELHATTIFAVHHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R+SVELA+ WR D LR LEAM+++ DK L+++G G+V+E
Sbjct: 63 TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 122
Query: 130 PENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGG+YAL+A RAL Q A++IAR A+ IA++ICV+TN I +E L
Sbjct: 123 PDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIASEICVFTNDQITVEEL 181
>gi|157692294|ref|YP_001486756.1| ATP-dependent protease peptidase subunit [Bacillus pumilus
SAFR-032]
gi|194014435|ref|ZP_03053052.1| ATP-dependent protease HslV [Bacillus pumilus ATCC 7061]
gi|166918419|sp|A8FD79|CLPQ_BACP2 RecName: Full=ATP-dependent protease subunit ClpQ
gi|157681052|gb|ABV62196.1| T01 family HslU component of HslUV peptidase [Bacillus pumilus
SAFR-032]
gi|194013461|gb|EDW23026.1| ATP-dependent protease HslV [Bacillus pumilus ATCC 7061]
Length = 181
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ G +AGDGQV+ GQ V MK A+KVRRL G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHKGKSAMAGDGQVTFGQAVVMKHTAKKVRRLFGGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAK+WR DK LR LEAM+++ +K L+++G G+V+EP+
Sbjct: 64 FEKFETKLEEYGGNLKRAAVELAKEWRSDKMLRQLEAMLIVMNKDSILLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG+YALSA RAL + +A +IA+ A+ A +ICVYTN I LE L+
Sbjct: 124 DGILAIGSGGNYALSAGRALKTHAGDHLTARDIAKAALETAGEICVYTNDQITLEELE 181
>gi|311068136|ref|YP_003973059.1| ATP-dependent protease peptidase subunit [Bacillus atrophaeus 1942]
gi|310868653|gb|ADP32128.1| ATP-dependent protease peptidase subunit [Bacillus atrophaeus 1942]
Length = 181
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ +G ++GDGQV+ GQ V MK ARKVR+L G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHNGKSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R+SVELAK+WR DK LR LEAM+++ ++ L+++G G+V+EP+
Sbjct: 64 FEMFEAKLEEYNGNLKRASVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG+YAL+A RAL SA EIA+ A+ A +ICVYTN I+LE L+
Sbjct: 124 DGILAIGSGGNYALAAGRALKKHAGESLSAREIAQAALETAGEICVYTNDQIILEELE 181
>gi|94500582|ref|ZP_01307113.1| ATP-dependent protease peptidase subunit [Oceanobacter sp. RED65]
gi|94427372|gb|EAT12351.1| ATP-dependent protease peptidase subunit [Oceanobacter sp. RED65]
Length = 175
Score = 196 bits (499), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/173 (58%), Positives = 137/173 (79%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR++ VV+ GDGQVSLG TVMK NARKVR L G +IAGFAG++ADAFTL E+
Sbjct: 2 TTILSVRREDEVVMGGDGQVSLGNTVMKGNARKVRTLYDGKVIAGFAGATADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E L+++ L R++VE+AK+WR D+ LR LEA++ +ADK +L+ITG GDVLEPE+ ++
Sbjct: 62 EGHLQKHGGHLTRAAVEMAKEWRSDRALRKLEAILAVADKDASLIITGNGDVLEPEDSLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
A+GSGG+YAL+AA+AL T A +I K ++IAADICV+TNHN+ +E+LK+
Sbjct: 122 AVGSGGNYALAAAKALYHETDMGARDIVEKGLTIAADICVFTNHNLTIESLKI 174
>gi|171060507|ref|YP_001792856.1| ATP-dependent protease peptidase subunit [Leptothrix cholodnii
SP-6]
gi|238065881|sp|B1Y6R3|HSLV_LEPCP RecName: Full=ATP-dependent protease subunit HslV
gi|170777952|gb|ACB36091.1| 20S proteasome A and B subunits [Leptothrix cholodnii SP-6]
Length = 178
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL+VR+ V + GDGQV+LG V+KA+ARKVRRL + ++AGFAG++ADAFTL
Sbjct: 4 FHGTTILSVRRGEQVAMGGDGQVTLGHIVVKASARKVRRLYREQVLAGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+ +AD++ +L+ITG GDVLEPE
Sbjct: 64 ERFESKLEKHQGHLVRAAVELTRDWRTDRVLRRLEAMLAVADRSASLIITGNGDVLEPEY 123
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G++AIGSGG+YA +AARA++ T+ S +I ++++ IA D+C+YTN + +ETL+
Sbjct: 124 GIVAIGSGGAYAQAAARAMLQHTEQSPADIVKRSLEIAGDLCIYTNQSHTIETLE 178
>gi|15643287|ref|NP_228331.1| ATP-dependent protease peptidase subunit [Thermotoga maritima MSB8]
gi|281411739|ref|YP_003345818.1| 20S proteasome A and B subunits [Thermotoga naphthophila RKU-10]
gi|11133189|sp|Q9WYZ1|HSLV_THEMA RecName: Full=ATP-dependent protease subunit HslV; Flags: Precursor
gi|4981034|gb|AAD35606.1|AE001728_7 heat shock protein HslV [Thermotoga maritima MSB8]
gi|281372842|gb|ADA66404.1| 20S proteasome A and B subunits [Thermotoga naphthophila RKU-10]
Length = 176
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 134/174 (77%), Gaps = 1/174 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+K H TTIL VR++G V+ GDGQV+ G TV+K NARKVR+LG+G ++AGFAGS ADA T
Sbjct: 1 MKFHGTTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMT 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L +R E KL ++ L +++VELAKDWR D+ LR LEA++L+ADK +I+G G+V++P
Sbjct: 61 LFDRFEAKLREWGGNLTKAAVELAKDWRTDRVLRRLEALLLVADKENIFIISGNGEVIQP 120
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLE 183
++ AIGSGG YAL+AA+AL+ +T SA EI KAM+IA +IC+YTN NIV+E
Sbjct: 121 DDDAAAIGSGGPYALAAAKALLRNTDLSAREIVEKAMTIAGEICIYTNQNIVIE 174
>gi|145348739|ref|XP_001418801.1| ClpYQ (HslUV)-type protease, proteolytic subunit HSLV (ClpQ)
[Ostreococcus lucimarinus CCE9901]
gi|144579031|gb|ABO97094.1| ClpYQ (HslUV)-type protease, proteolytic subunit HSLV (ClpQ)
[Ostreococcus lucimarinus CCE9901]
Length = 200
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/168 (61%), Positives = 130/168 (77%), Gaps = 2/168 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATT+L VRKDG VI DGQV++G ++K N +KVR + G ++ GFAG++ADAFTL E
Sbjct: 18 HATTVLCVRKDGETVIMADGQVTMGSEIVKPNVKKVRIIEPG-VVGGFAGATADAFTLFE 76
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE++LEQ+P QL R+ VELAK WR DK+LR LEA +++ADK + ITG GDVLEP +G
Sbjct: 77 RLEQQLEQHPGQLTRACVELAKQWRTDKFLRKLEATMIVADKESSFQITGSGDVLEPHDG 136
Query: 134 VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI 180
V+ IGSGGSYAL+AARAL+ A +IA+KAM+IAAD CVYTNHN
Sbjct: 137 VIGIGSGGSYALAAARALVDVPGMKAFDIAKKAMTIAADTCVYTNHNF 184
>gi|83589877|ref|YP_429886.1| ATP-dependent protease peptidase subunit [Moorella thermoacetica
ATCC 39073]
gi|123524655|sp|Q2RJP6|HSLV_MOOTA RecName: Full=ATP-dependent protease subunit HslV
gi|83572791|gb|ABC19343.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Moorella thermoacetica ATCC 39073]
Length = 174
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M TT++ VR G V +AGDGQV+ G TVMK ARKVRRL + ++AGFAGS ADAFTL
Sbjct: 1 MEGTTVIAVRHQGRVALAGDGQVTFGNTVMKHKARKVRRLYQDRVLAGFAGSVADAFTLF 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E KLE Y L R++VEL K+WR D++LR LEA++++ADK L+I+G G+++EP++
Sbjct: 61 EKFEAKLETYHGNLQRAAVELGKEWRTDRFLRRLEALLVVADKEHLLIISGNGEIVEPDD 120
Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ AIGSGG Y +A + T +A EIAR+AM+IAA IC+YTN+NI++E L
Sbjct: 121 GIAAIGSGGPYALAAARALVAHTSMTAGEIAREAMNIAASICIYTNNNIIVEEL 174
>gi|319424865|gb|ADV52939.1| 20S proteasome A and B subunits [Shewanella putrefaciens 200]
Length = 174
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NA+KVRRL +AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKALAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + LLRS+VELAKDWR D+ LR LEAM+++AD +L+ITG GDV++PE ++
Sbjct: 62 EAKLEMHQGHLLRSAVELAKDWRTDRMLRKLEAMLVVADAEASLIITGNGDVVQPEYDLV 121
Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+Y +A L +T+ SA EIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAGDICVFTNQFKTIEEL 172
>gi|288550547|ref|ZP_05970868.2| hypothetical protein ENTCAN_09613 [Enterobacter cancerogenus ATCC
35316]
gi|288314762|gb|EFC53700.1| ATP-dependent protease HslVU, peptidase subunit [Enterobacter
cancerogenus ATCC 35316]
Length = 164
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/160 (58%), Positives = 124/160 (77%), Gaps = 1/160 (0%)
Query: 27 VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
+VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L
Sbjct: 1 MVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHL 60
Query: 87 LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSGG YA +
Sbjct: 61 VKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLIAIGSGGPYAQA 120
Query: 147 AARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AARAL+ +T +A +IA KA+ IA DIC+YTNHN +E L
Sbjct: 121 AARALLENTDMNARDIAVKALDIAGDICIYTNHNHTIEEL 160
>gi|16800385|ref|NP_470653.1| ATP-dependent protease peptidase subunit [Listeria innocua
Clip11262]
gi|21759185|sp|Q92C74|HSLV_LISIN RecName: Full=ATP-dependent protease subunit HslV
gi|16413790|emb|CAC96548.1| clpQ [Listeria innocua Clip11262]
gi|313619211|gb|EFR90976.1| ATP-dependent protease HslVU, peptidase subunit [Listeria innocua
FSL S4-378]
gi|313623984|gb|EFR94083.1| ATP-dependent protease HslVU, peptidase subunit [Listeria innocua
FSL J1-023]
Length = 179
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V+ DG +AGDGQV+LG++V MK A+KVRRL +IAGFAGS ADAF
Sbjct: 1 MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R++VELA+ WR D LR LEAM+++ DK L+++G G+V+E
Sbjct: 61 TLFEKFEAKLNEYNGNLERAAVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGG+YAL+A RAL Q A++IAR A+ IA++ICV+TN +I +E L
Sbjct: 121 PDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIASEICVFTNDHITVEEL 179
>gi|223992737|ref|XP_002286052.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977367|gb|EED95693.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 169
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 121/156 (77%), Gaps = 1/156 (0%)
Query: 31 GDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSS 90
GDG VS+G ++K NA+K+RR+ + GFAG++ADAFTLLERLE KL++YP QL RS
Sbjct: 2 GDGMVSMGSVIVKPNAKKIRRIYPKTVGVGFAGTTADAFTLLERLEGKLDEYPGQLARSC 61
Query: 91 VELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARA 150
VELAK WR DKYLR LEA +L+ADK + ITG GDVLE +GV+ +GSG S+A++AARA
Sbjct: 62 VELAKGWRTDKYLRRLEASLLVADKKASFEITGNGDVLESHDGVLGVGSGSSFAIAAARA 121
Query: 151 LMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
LM + SAE++ARKAM IA+++C+YTN N +E+L
Sbjct: 122 LMDNPDLSAEDVARKAMQIASEMCIYTNDNFTIESL 157
>gi|209521636|ref|ZP_03270331.1| 20S proteasome A and B subunits [Burkholderia sp. H160]
gi|209497938|gb|EDZ98098.1| 20S proteasome A and B subunits [Burkholderia sp. H160]
Length = 178
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGNKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AA+AL +T+ S +I K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALSDNTELSPRDIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|332981425|ref|YP_004462866.1| ATP dependent peptidase CodWX, CodW component [Mahella
australiensis 50-1 BON]
gi|332699103|gb|AEE96044.1| ATP dependent peptidase CodWX, CodW component [Mahella
australiensis 50-1 BON]
Length = 176
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 132/173 (76%), Gaps = 2/173 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI+ V+KDG +AGDGQV++G+ TVMK +A+KVRR+ ++ GFAGS ADAFTL
Sbjct: 2 LKGTTIVAVKKDGKTAVAGDGQVTMGENTVMKHHAKKVRRIYNNEVVIGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+Q+ LLR++VELA+DWR DK +R LEA+++ ADK LVI+G G+V+EP+
Sbjct: 62 SERFEDKLQQHSGNLLRAAVELAQDWRSDKVMRKLEALMIAADKERMLVISGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLE 183
+ V AIGSGG YAL+A RAL++ + SA +IA KA+ IA+ IC+YTN NI +E
Sbjct: 122 DNVAAIGSGGPYALAAGRALVNNTDLSASDIAYKALEIASSICIYTNTNITVE 174
>gi|187922350|ref|YP_001893992.1| ATP-dependent protease peptidase subunit [Burkholderia phytofirmans
PsJN]
gi|238065844|sp|B2T1N9|HSLV_BURPP RecName: Full=ATP-dependent protease subunit HslV
gi|187713544|gb|ACD14768.1| 20S proteasome A and B subunits [Burkholderia phytofirmans PsJN]
Length = 178
Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AA AL +T+ S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAATALAHNTELSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|311030137|ref|ZP_07708227.1| ATP-dependent protease peptidase subunit [Bacillus sp. m3-13]
Length = 180
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 128/177 (72%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ G ++GDGQV+ G V MK ARKVR+L G I+AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHKGQCAMSGDGQVTFGNAVVMKHTARKVRKLFNGRILAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y + RS+VELAK+WR DK LR LEAM+++ D++ L+++G G+V+EP+
Sbjct: 64 FEMFEAKLEEYNGNIQRSAVELAKEWRSDKVLRKLEAMLIVMDESSMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA RAL +A EIA+ ++ A +ICVYTN NI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKRYAGEHMTAREIAKASLETAGEICVYTNDNIIVEEL 180
>gi|307718593|ref|YP_003874125.1| ATP-dependent protease HslV [Spirochaeta thermophila DSM 6192]
gi|306532318|gb|ADN01852.1| ATP-dependent protease HslV [Spirochaeta thermophila DSM 6192]
Length = 178
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT++ VR++GVV +AGDGQV++G T+MK NARKVR L G ++ GFAG++ADAFTL
Sbjct: 3 EVKSTTVIAVRRNGVVAMAGDGQVTMGTTIMKGNARKVRTLYDGRVLVGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+++ +LRS+V LAKDWR D+ LR LEA++L+AD+ L+++G GDV+EPE
Sbjct: 63 FERFEGKLKEFSGDVLRSAVALAKDWRTDRMLRRLEALLLVADRERMLLLSGTGDVVEPE 122
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+GV+AIGSGG Y +A L T SA IA +++ IAA IC+YTN I++E L
Sbjct: 123 DGVLAIGSGGPYAHAAAKALLAHTDLSARRIAEESLRIAASICIYTNEQIIVEEL 177
>gi|239618026|ref|YP_002941348.1| 20S proteasome A and B subunits [Kosmotoga olearia TBF 19.5.1]
gi|239506857|gb|ACR80344.1| 20S proteasome A and B subunits [Kosmotoga olearia TBF 19.5.1]
Length = 181
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 139/177 (78%), Gaps = 1/177 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+MH TTIL VR++G VIAGDGQ++LG TVMK +ARKVR+LG G ++AGFAGS ADA TL
Sbjct: 3 QMHGTTILAVRRNGKTVIAGDGQITLGATVMKGSARKVRKLGDGKVLAGFAGSVADALTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+K + + LLR++V LAK+WR +K LRNLEA++L+AD L+I+G G+V++P+
Sbjct: 63 FEKFEEKYRESNSSLLRAAVNLAKEWRTNKILRNLEALLLVADTDNILLISGNGEVIQPD 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
V+AIGSGG YAL+AA+AL+ +T AE IA++AM IA++IC+YTN N +E L+V
Sbjct: 123 ENVIAIGSGGPYALAAAQALLRNTDMDAEGIAKQAMKIASEICIYTNSNFTVEALEV 179
>gi|307297639|ref|ZP_07577445.1| 20S proteasome A and B subunits [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916899|gb|EFN47281.1| 20S proteasome A and B subunits [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 182
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 131/174 (75%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL +RK G VI GDGQ+++G TVMK ARKVR+LG G+++AGFAGS ADA TL
Sbjct: 4 FHGTTILVLRKKGKTVIVGDGQITIGDTVMKGTARKVRKLGDGSVLAGFAGSVADAMTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E+KL + + L R++V LAKDWR +K L+NL+A++L+AD+ L+I+G G+V+EP+
Sbjct: 64 EKFEEKLHESNSNLKRAAVNLAKDWRTNKILKNLQALLLVADRESILLISGNGEVIEPDE 123
Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+AIGSGGSY +A L ++Q AEEIA K+M IA++IC+YTN N +ETL
Sbjct: 124 EVLAIGSGGSYALAAARALLRNSQLEAEEIAVKSMEIASEICIYTNTNFTMETL 177
>gi|219682474|ref|YP_002468858.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
gi|219622207|gb|ACL30363.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
Length = 170
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 123/160 (76%), Gaps = 1/160 (0%)
Query: 27 VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
VVI GDGQ +LG T+MK+N +K+R L +IAGFAG +ADAFTL E +KKL Y QL
Sbjct: 7 VVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMFDKKLAMYQGQL 66
Query: 87 LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
R+++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE+ ++AIGSGGSYA S
Sbjct: 67 QRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPEDDLIAIGSGGSYAQS 126
Query: 147 AARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
+ARAL+ N A +I RK+++IAA+IC+YTNHN ++ L
Sbjct: 127 SARALIENTNLDANQIVRKSLNIAANICIYTNHNFTIKEL 166
>gi|332686605|ref|YP_004456379.1| ATP-dependent protease HslV [Melissococcus plutonius ATCC 35311]
gi|332370614|dbj|BAK21570.1| ATP-dependent protease HslV [Melissococcus plutonius ATCC 35311]
Length = 182
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 138/178 (77%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI + KDG +AGDGQV++GQ+V MK +A+KVRR+ ++ GFAGS ADAFT
Sbjct: 5 QFHSTTICAIEKDGKFAMAGDGQVTMGQSVVMKGSAKKVRRIYNNEVVVGFAGSVADAFT 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ +K L+++G G+V++P
Sbjct: 65 LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVIQP 124
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG++AL+AARA+ + + SA+EIA+ A+SIAADICV+TNHNI++E +
Sbjct: 125 DDGILAIGSGGNFALAAARAMKNYGDKEISAKEIAKNALSIAADICVFTNHNIIVEEI 182
>gi|206558902|ref|YP_002229662.1| ATP-dependent protease peptidase subunit [Burkholderia cenocepacia
J2315]
gi|238065815|sp|B4E7Z2|HSLV_BURCJ RecName: Full=ATP-dependent protease subunit HslV
gi|198034939|emb|CAR50811.1| ATP-dependent protease HslV [Burkholderia cenocepacia J2315]
Length = 178
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL+ +T S EI K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALVENTDLSPREIVEKSLGIAGDMCIYTNHNRIIETIE 178
>gi|94987174|ref|YP_595107.1| ATP-dependent protease peptidase subunit [Lawsonia intracellularis
PHE/MN1-00]
gi|166222983|sp|Q1MQE1|HSLV_LAWIP RecName: Full=ATP-dependent protease subunit HslV
gi|94731423|emb|CAJ54786.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Lawsonia
intracellularis PHE/MN1-00]
Length = 177
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTIL VR G V +AGDGQV+LGQ+V MK A+KVRR+ K +IAGFAG++ADAF
Sbjct: 1 MEIRGTTILAVRHKGHVALAGDGQVTLGQSVVMKHTAKKVRRMYKNQVIAGFAGTTADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER + LE+ L+R++VELAK+WR DKYLR LEAM+L+ DK T V++G GDV+E
Sbjct: 61 TLFERFDNYLEETNGNLVRAAVELAKEWRKDKYLRRLEAMLLVVDKDHTFVLSGTGDVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G+ AIGSGG Y +A + ++ SA EIAR++M I A+ICV+TN N+ LETL
Sbjct: 121 PDDGIAAIGSGGLYAVAAARALVAHSELSAAEIARESMRITAEICVFTNLNLTLETL 177
>gi|56964040|ref|YP_175771.1| ATP-dependent protease peptidase subunit [Bacillus clausii KSM-K16]
gi|85542195|sp|Q5WFQ0|HSLV_BACSK RecName: Full=ATP-dependent protease subunit HslV
gi|56910283|dbj|BAD64810.1| ATP-dependent protease HslVU (ClpYQ) peptidase subunit [Bacillus
clausii KSM-K16]
Length = 181
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 127/176 (72%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI + +G +AGDGQV+ G V MK ARKVRRL N++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAIAHNGGFAMAGDGQVTFGNAVVMKHTARKVRRLYHNNVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R+SVELAK+WR D+ LR LEAM+++ DK L+I+G G+V++P+
Sbjct: 64 FEKFEAKLEEYNGNLQRASVELAKEWRSDRVLRKLEAMLIVMDKQALLLISGTGEVIQPD 123
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA RAL + SA EIA A+ A +ICVYTN IV+E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKRHAPGLSAREIAVAALETAGEICVYTNDQIVVEEL 179
>gi|78357167|ref|YP_388616.1| ATP-dependent protease peptidase subunit [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
gi|123552215|sp|Q30ZH5|HSLV_DESDG RecName: Full=ATP-dependent protease subunit HslV
gi|78219572|gb|ABB38921.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 180
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 136/176 (77%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL V+ D V +AGDGQV+LGQ VMK ARKVRR+ K IIAGFAGS+ADAFTL
Sbjct: 3 LKGTTILAVKDDEGVSMAGDGQVTLGQAIVMKHGARKVRRIYKDRIIAGFAGSTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ LLR+SVE+AKDWR DK+LR LEAM+L++D T L+++G GDV+EP+
Sbjct: 63 FERFEAKLEEFGGNLLRASVEMAKDWRKDKFLRRLEAMLLVSDGTTLLMLSGTGDVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+GV AIGSGG YAL+AARAL T SA+EI KAM+IA ++CV+TN ++ +E +
Sbjct: 123 DGVAAIGSGGPYALAAARALQRHTALSAQEIVTKAMAIAGELCVFTNDHLTVENAR 178
>gi|288553071|ref|YP_003425006.1| ATP-dependent protease peptidase subunit [Bacillus pseudofirmus
OF4]
gi|288544231|gb|ADC48114.1| ATP-dependent protease peptidase subunit [Bacillus pseudofirmus
OF4]
Length = 183
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 133/177 (75%), Gaps = 3/177 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ +G +AGDGQV+LG V MK A+KVRR+ +G ++AGFAGS ADAFTL
Sbjct: 7 FHATTIFAVQHNGRCAMAGDGQVTLGNAVVMKHTAKKVRRIYQGKVLAGFAGSVADAFTL 66
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E +LE++ L R++VELAK+WR DK LR LEAM+++ ++ L+I+G G+V+EP+
Sbjct: 67 FEKFESRLEEFNGNLKRAAVELAKEWRSDKVLRQLEAMLIVMNREHILLISGTGEVIEPD 126
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG+YALSA RAL + SA+EIA A+ A +ICVYTN N+V+E L+
Sbjct: 127 DGILAIGSGGNYALSAGRALKKHAPDLSAKEIATAALETAGEICVYTNLNLVVEELQ 183
>gi|229544387|ref|ZP_04433445.1| 20S proteasome A and B subunits [Bacillus coagulans 36D1]
gi|229324872|gb|EEN90549.1| 20S proteasome A and B subunits [Bacillus coagulans 36D1]
Length = 180
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 138/186 (74%), Gaps = 10/186 (5%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFA 62
MGD HATTI +R +G +AGDGQV+LG +V MK A+KVRRL G ++AGFA
Sbjct: 1 MGD------FHATTIFAIRHNGKSAMAGDGQVTLGNSVVMKNTAKKVRRLFNGKVLAGFA 54
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
GS ADAFTL E E KL++Y L R++VELAK WR DK LR LEAM+++ D+ L+++
Sbjct: 55 GSVADAFTLSEMFEGKLQEYNGNLTRAAVELAKMWRSDKVLRKLEAMLIVMDENNLLLVS 114
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARAL--MSTQN-SAEEIARKAMSIAADICVYTNHN 179
G G+V+EP++G++AIGSGG+YAL+A RAL + +N +A+EIAR ++ IA++ICV+TN N
Sbjct: 115 GTGEVIEPDDGILAIGSGGNYALAAGRALKRHAAENFTAKEIARASLEIASEICVFTNSN 174
Query: 180 IVLETL 185
I++E L
Sbjct: 175 IIVEEL 180
>gi|294507659|ref|YP_003571717.1| ATP-dependent protease hslV [Salinibacter ruber M8]
gi|294343987|emb|CBH24765.1| ATP-dependent protease hslV [Salinibacter ruber M8]
Length = 187
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 127/168 (75%), Gaps = 2/168 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATT+L VR +G + + DGQ ++ +TV+K A KVR L G+I+AGFAGS+ADAFTL E
Sbjct: 9 HATTVLGVRHNGQIALGSDGQATMNETVVKHKAEKVRSLYDGDILAGFAGSTADAFTLFE 68
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
R E+KL++Y + R++VELAK+WR DKYLR LEA++ +A L+I+G GDV+EP++
Sbjct: 69 RFEEKLQEYGGNVARAAVELAKEWRTDKYLRRLEALLAVASPGELLLISGAGDVIEPDDD 128
Query: 134 VMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHN 179
++AIGSGGS+AL+A+RAL+ +A +I +SIAADIC+YTNHN
Sbjct: 129 IIAIGSGGSFALAASRALLQNAQGLTARDIVENGLSIAADICIYTNHN 176
>gi|167585120|ref|ZP_02377508.1| 20S proteasome A and B subunits [Burkholderia ubonensis Bu]
Length = 178
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADANTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL+ +T+ S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALVENTELSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|320535375|ref|ZP_08035489.1| ATP-dependent protease HslVU, peptidase subunit [Treponema
phagedenis F0421]
gi|320147777|gb|EFW39279.1| ATP-dependent protease HslVU, peptidase subunit [Treponema
phagedenis F0421]
Length = 193
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 138/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TT++ VRK+G + +AGDGQV++G TVMK NARKVR++ G II GFAG++ADAFTL
Sbjct: 19 KVRSTTVIAVRKNGKIAMAGDGQVTMGNTVMKGNARKVRKIYDGKIITGFAGATADAFTL 78
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LE+ + KL+ Y L R++VELAK+WR DK L+NLEA++L+ADK L+I+G GD++EP+
Sbjct: 79 LEKFDGKLKTYNGDLTRAAVELAKEWRTDKMLKNLEALLLVADKDTILLISGNGDIIEPQ 138
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YA +AA AL+ +T+ +A+EIA K++ IA IC+YTNH I LE L
Sbjct: 139 EDTIAIGSGGNYAYAAALALLRNTELTAKEIAEKSLEIAGQICIYTNHTIQLEEL 193
>gi|95928613|ref|ZP_01311360.1| 20S proteasome, A and B subunits [Desulfuromonas acetoxidans DSM
684]
gi|95135403|gb|EAT17055.1| 20S proteasome, A and B subunits [Desulfuromonas acetoxidans DSM
684]
Length = 176
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 130/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI+ VR+D V +AGDGQV+LG TVMK A K+RR+ IIAGFAGS+ADAFTL
Sbjct: 2 FRGTTIVCVRRDDQVTLAGDGQVTLGHTVMKHGACKIRRMHNDQIIAGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E KL+++ QL R++V LAKDWR D+ LR LEA++L+AD+ TLVI+G+GDV+E ++
Sbjct: 62 EKFEAKLQEFRGQLARAAVALAKDWRNDRVLRRLEALLLVADRDQTLVISGVGDVIESDD 121
Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV AIGSGG Y +A L +T E+IA +A++IAA+IC+YTN NI +ETL
Sbjct: 122 GVAAIGSGGPYAQAAARALLRNTDMVPEQIAEQALTIAAEICIYTNDNISMETL 175
>gi|83816553|ref|YP_445762.1| ATP-dependent protease peptidase subunit [Salinibacter ruber DSM
13855]
gi|83757947|gb|ABC46060.1| heat shock protein [Salinibacter ruber DSM 13855]
Length = 213
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 127/168 (75%), Gaps = 2/168 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATT+L VR +G + + DGQ ++ +TV+K A KVR L G+I+AGFAGS+ADAFTL E
Sbjct: 35 HATTVLGVRHNGQIALGSDGQATMNETVVKHKAEKVRSLYDGDILAGFAGSTADAFTLFE 94
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
R E+KL++Y + R++VELAK+WR DKYLR LEA++ +A L+I+G GDV+EP++
Sbjct: 95 RFEEKLQEYGGNVARAAVELAKEWRTDKYLRRLEALLAVASPGELLLISGAGDVIEPDDD 154
Query: 134 VMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHN 179
++AIGSGGS+AL+A+RAL+ +A +I +SIAADIC+YTNHN
Sbjct: 155 IIAIGSGGSFALAASRALLQNAQGLTARDIVENGLSIAADICIYTNHN 202
>gi|170693981|ref|ZP_02885137.1| 20S proteasome A and B subunits [Burkholderia graminis C4D1M]
gi|170141053|gb|EDT09225.1| 20S proteasome A and B subunits [Burkholderia graminis C4D1M]
Length = 178
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AA+AL +T+ S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALADNTELSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|325971100|ref|YP_004247291.1| ATP-dependent protease hslV [Spirochaeta sp. Buddy]
gi|324026338|gb|ADY13097.1| ATP-dependent protease hslV [Spirochaeta sp. Buddy]
Length = 178
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 127/175 (72%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI+ VRKDG V IAGDGQV+ G T++K+NA KVR L G +I GFAG++ADAFTL
Sbjct: 4 FKGTTIVAVRKDGHVAIAGDGQVTAGDTILKSNAHKVRTLYDGKVITGFAGTTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E E KL+Q+ L RS+VELAK WR+DK LR LEAM+L++D +I G GDV++PE
Sbjct: 64 ELFETKLKQFNGDLTRSAVELAKQWRVDKQLRQLEAMMLVSDGKRIFLINGAGDVVDPER 123
Query: 133 GVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ IGSGG+YALSAA A + S SAE+IARK++ IAA +C+YT+ +I +E L
Sbjct: 124 DAIGIGSGGNYALSAALAYLEASPTMSAEQIARKSVEIAAKLCIYTDDSINVEVL 178
>gi|94264968|ref|ZP_01288739.1| 20S proteasome, A and B subunits [delta proteobacterium MLMS-1]
gi|94268396|ref|ZP_01291164.1| 20S proteasome, A and B subunits [delta proteobacterium MLMS-1]
gi|93451623|gb|EAT02418.1| 20S proteasome, A and B subunits [delta proteobacterium MLMS-1]
gi|93454571|gb|EAT04849.1| 20S proteasome, A and B subunits [delta proteobacterium MLMS-1]
Length = 176
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 134/174 (77%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ +TT++ +R G V +AGDGQV++G V+K ARK+RRL G +I GFAG++ADAFTL
Sbjct: 3 IRSTTVVAIRHRGQVAMAGDGQVTMGNVVVKHQARKIRRLYHGKVITGFAGATADAFTLF 62
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+LE++LE+Y LLR++VELAK+WR D+ LR LEA+++ AD +L+I+G GDV+EP++
Sbjct: 63 EKLEQQLEKYGGNLLRAAVELAKEWRTDRMLRRLEALLVAADAERSLLISGNGDVIEPDD 122
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGGSYA +AA+ L++ ++ A EI R ++ IA ++C+YTN I LE L
Sbjct: 123 GILAIGSGGSYAHAAAKGLVAHSELEAAEICRASLGIAGELCIYTNEQIQLEIL 176
>gi|91781466|ref|YP_556672.1| ATP-dependent protease peptidase subunit [Burkholderia xenovorans
LB400]
gi|296161396|ref|ZP_06844203.1| 20S proteasome A and B subunits [Burkholderia sp. Ch1-1]
gi|123169128|sp|Q146W9|HSLV_BURXL RecName: Full=ATP-dependent protease subunit HslV
gi|91685420|gb|ABE28620.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Burkholderia xenovorans LB400]
gi|295888382|gb|EFG68193.1| 20S proteasome A and B subunits [Burkholderia sp. Ch1-1]
Length = 178
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVMVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AA+AL +T+ S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALADNTELSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|167627817|ref|YP_001678317.1| ATP-dependent protease peptidase subunit [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|241668378|ref|ZP_04755956.1| ATP-dependent protease peptidase subunit [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254876911|ref|ZP_05249621.1| ATP-dependent protease peptidase subunit [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|167597818|gb|ABZ87816.1| ATP-dependent protease HslVU, peptidase subunit [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|254842932|gb|EET21346.1| ATP-dependent protease peptidase subunit [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 183
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M TTIL VRK VVI GDGQ +LG T+ K N KVR+L G ++ GFAGS+ADAFTL
Sbjct: 4 MKGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
E+ E+KLE Y L R++VE+ ++WR+D+ L LEAMI++AD+ ++L+I+G GDV+ +
Sbjct: 64 EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVADEKLSLLISGAGDVMAADK 123
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N +++IGSG +YA SAA AL+ +T SAEEI RK+++IAAD C+YTNHN +E+L+
Sbjct: 124 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 179
>gi|302872577|ref|YP_003841213.1| 20S proteasome A and B subunits [Caldicellulosiruptor obsidiansis
OB47]
gi|302575436|gb|ADL43227.1| 20S proteasome A and B subunits [Caldicellulosiruptor obsidiansis
OB47]
Length = 176
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 130/174 (74%), Gaps = 3/174 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ Q +MK+ A+KVR+L G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGRVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++ADK V++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKDHLFVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNI-VLE 183
+ + AIGSGG YAL+AARAL +T SA EIA+KA+ IAA ICVYTN+NI VLE
Sbjct: 122 DNIAAIGSGGPYALAAARALFQNTDLSAAEIAKKALEIAASICVYTNNNITVLE 175
>gi|320528984|ref|ZP_08030076.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
artemidis F0399]
gi|320138614|gb|EFW30504.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
artemidis F0399]
Length = 179
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ G+ +MKA ARKVRRL G I+AGFAGS ADAFTL
Sbjct: 3 FHATTIVAVKKGNKVAIAGDGQVTFGERAIMKATARKVRRLYHGKILAGFAGSVADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE Y L R++VELAKDWR DK LR LEA++L+ADK L+I+G G+V+EP+
Sbjct: 63 FEKFEAKLESYSGNLQRAAVELAKDWRTDKVLRKLEALLLVADKDGILMISGNGEVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG +AL+AARAL+ + A +A++++SIAADICVYTNHNI +E L+
Sbjct: 123 GDCTAIGSGGFFALAAARALILHSDMDAPAVAKESLSIAADICVYTNHNITVEVLE 178
>gi|304316914|ref|YP_003852059.1| 20S proteasome A and subunit betas [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778416|gb|ADL68975.1| 20S proteasome A and B subunits [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 176
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 132/175 (75%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ VR+D V IAGDGQV+ G+ T++K A+K+RRL ++ GFAGS ADA TL
Sbjct: 2 FKGTTIVAVRRDNKVSIAGDGQVTFGENTILKHGAKKIRRLYNDEVLIGFAGSVADALTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E+KLEQY L R++VELA++WR DK L+ LEA+++ ADK +TLVI+G G+V+EP+
Sbjct: 62 SEMFEEKLEQYGGNLKRAAVELAQEWRKDKVLKKLEALLIAADKNVTLVISGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
N V+AIGSGG++A+SAA AL N S EEIARK++ IA+ ICVYTN +I +E+L
Sbjct: 122 NDVIAIGSGGNFAMSAALALRYNTNLSVEEIARKSLEIASQICVYTNDHITVESL 176
>gi|291085930|ref|ZP_06354447.2| hypothetical protein CIT292_08924 [Citrobacter youngae ATCC 29220]
gi|291069632|gb|EFE07741.1| ATP-dependent protease HslVU, peptidase subunit [Citrobacter
youngae ATCC 29220]
Length = 164
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/160 (58%), Positives = 123/160 (76%), Gaps = 1/160 (0%)
Query: 27 VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
+VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L
Sbjct: 1 MVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHL 60
Query: 87 LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSGG YA +
Sbjct: 61 VKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQA 120
Query: 147 AARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 AARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 160
>gi|73662824|ref|YP_301605.1| ATP-dependent protease peptidase subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|123642437|sp|Q49X38|HSLV_STAS1 RecName: Full=ATP-dependent protease subunit HslV
gi|72495339|dbj|BAE18660.1| proteasome protease subunit [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 180
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 134/179 (74%), Gaps = 3/179 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ +HATTI V+ +G +AGDGQV+LG Q +MK ARKVRRL ++AGFAGS ADA
Sbjct: 2 STSIHATTIFAVQHNGHAAMAGDGQVTLGEQVIMKQTARKVRRLYNDKVLAGFAGSVADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ D+T LV++G G+V+
Sbjct: 62 FTLFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDETSILVVSGTGEVI 121
Query: 129 EPENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ ++AIGSGG+YALSA RAL +T SA E+A +++ +A+DICV+TN I++E L
Sbjct: 122 VPDDNLIAIGSGGNYALSAGRALKRNATHLSASEMAYESLKVASDICVFTNDRIIVENL 180
>gi|25403657|pir||C84997 heat shock protein hslV [imported] - Buchnera sp. (strain APS)
gi|10039233|dbj|BAB13267.1| heat shock protein hslV [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 170
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 124/160 (77%), Gaps = 1/160 (0%)
Query: 27 VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
VVI GDGQ +LG T+MK+N +K+R L +IAGFAG +ADAFTL E +KKL Y QL
Sbjct: 7 VVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMFDKKLAMYQGQL 66
Query: 87 LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
R+++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE+ ++AIGSGGSYA S
Sbjct: 67 QRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPEDDLIAIGSGGSYAQS 126
Query: 147 AARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ARAL+ +T A +I RK+++IAA+IC+YTNHN ++ L
Sbjct: 127 SARALIENTHLDANQIVRKSLNIAANICIYTNHNFTIKEL 166
>gi|226946554|ref|YP_002801627.1| ATP-dependent protease peptidase subunit [Azotobacter vinelandii
DJ]
gi|226721481|gb|ACO80652.1| heat shock protein HslV [Azotobacter vinelandii DJ]
Length = 180
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 135/173 (78%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER
Sbjct: 7 TTIVSVRRQGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 66
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR ++ L LEAM+ +A+K +L+ITG GDV+EPE G++
Sbjct: 67 EGQLEKHQGHLVRAAVELAKDWRTERSLSRLEAMLAVANKDASLIITGNGDVVEPEEGLI 126
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
A+GSGG YA +AA+AL+ T SA E+A A++IA ICV+TN N+ +E L +
Sbjct: 127 AMGSGGPYAQAAAKALLLHTGLSAREVAETALNIAGSICVFTNQNLTIEELDL 179
>gi|307728178|ref|YP_003905402.1| 20S proteasome A and subunit Bs [Burkholderia sp. CCGE1003]
gi|307582713|gb|ADN56111.1| 20S proteasome A and B subunits [Burkholderia sp. CCGE1003]
Length = 178
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDQVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AA+AL +T S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALADNTALSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|283853297|ref|ZP_06370547.1| 20S proteasome A and B subunits [Desulfovibrio sp. FW1012B]
gi|283571337|gb|EFC19347.1| 20S proteasome A and B subunits [Desulfovibrio sp. FW1012B]
Length = 184
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 139/178 (78%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTIL V+ D V +AGDGQV+LGQ+V MK ARKVRR+ K ++ GFAG++ADAF
Sbjct: 1 MELRGTTILAVKTDTGVAMAGDGQVTLGQSVAMKHGARKVRRIYKDKVVIGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER E KLE++ L+R+SVELAKDWR DKYLR LEAM+L+AD L+++G GDV+E
Sbjct: 61 TLFERFEAKLEEFGGNLVRASVELAKDWRKDKYLRRLEAMLLVADAGNILLLSGNGDVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P++GV AIGSGG YAL+AARAL+ T S EI +AM+IAA+ICV+TN IV+ET++
Sbjct: 121 PDDGVAAIGSGGPYALAAARALVRHTGLSGREIVERAMAIAAEICVFTNDRIVVETVE 178
>gi|148269542|ref|YP_001244002.1| ATP-dependent protease peptidase subunit [Thermotoga petrophila
RKU-1]
gi|170288217|ref|YP_001738455.1| 20S proteasome A and B subunits [Thermotoga sp. RQ2]
gi|189036249|sp|A5IJQ3|HSLV_THEP1 RecName: Full=ATP-dependent protease subunit HslV
gi|238065945|sp|B1L8X4|HSLV_THESQ RecName: Full=ATP-dependent protease subunit HslV
gi|147735086|gb|ABQ46426.1| 20S proteasome, A and B subunits [Thermotoga petrophila RKU-1]
gi|170175720|gb|ACB08772.1| 20S proteasome A and B subunits [Thermotoga sp. RQ2]
Length = 176
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 133/174 (76%), Gaps = 1/174 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+K H TTIL VR++G V+ GDGQV+ G TV+K NARKVR+LG+G ++AGFAGS ADA T
Sbjct: 1 MKFHGTTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMT 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L +R E KL ++ L +++VELAKDWR D+ LR LEA++L+ADK +I+G G+V++P
Sbjct: 61 LFDRFEAKLREWGGNLTKAAVELAKDWRTDRVLRRLEALLLVADKENIFIISGNGEVIQP 120
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLE 183
++ AIGSGG YAL+AA+AL+ +T SA EI KAM IA +IC+YTN NIV+E
Sbjct: 121 DDDAAAIGSGGPYALAAAKALLRNTDLSAREIVEKAMMIAGEICIYTNQNIVIE 174
>gi|295675158|ref|YP_003603682.1| 20S proteasome A and B subunits [Burkholderia sp. CCGE1002]
gi|295435001|gb|ADG14171.1| 20S proteasome A and B subunits [Burkholderia sp. CCGE1002]
Length = 178
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGNKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AA+AL +T+ S +I K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALADNTELSPRDIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|107024022|ref|YP_622349.1| ATP-dependent protease peptidase subunit [Burkholderia cenocepacia
AU 1054]
gi|116691109|ref|YP_836732.1| ATP-dependent protease peptidase subunit [Burkholderia cenocepacia
HI2424]
gi|123371180|sp|Q1BSM9|HSLV_BURCA RecName: Full=ATP-dependent protease subunit HslV
gi|166221629|sp|A0KBG2|HSLV_BURCH RecName: Full=ATP-dependent protease subunit HslV
gi|105894211|gb|ABF77376.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Burkholderia cenocepacia AU 1054]
gi|116649198|gb|ABK09839.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Burkholderia cenocepacia HI2424]
Length = 178
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL+ +T S +I K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALVENTDLSPRDIVEKSLGIAGDMCIYTNHNRIIETIE 178
>gi|302392402|ref|YP_003828222.1| ATP dependent peptidase CodWX, CodW component [Acetohalobium
arabaticum DSM 5501]
gi|302204479|gb|ADL13157.1| ATP dependent peptidase CodWX, CodW component [Acetohalobium
arabaticum DSM 5501]
Length = 175
Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 130/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATT++ V++ V IAGDGQV++ TVMK A+KVRRL G ++AGFAGS+AD FTL
Sbjct: 2 FEATTVVAVKQGKKVAIAGDGQVTMKHTVMKHKAKKVRRLYNGEVLAGFAGSAADGFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E K+E++ L R++VELAK+WR DK LR LEA++++A+ LVI+G GDV+EP++
Sbjct: 62 EKFEAKIEEFQGNLQRAAVELAKEWRTDKMLRKLEALLIVANDEHLLVISGSGDVIEPDD 121
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG YAL+A RAL+ ++ +IA++A+ IA+DIC+YTN NI +E +
Sbjct: 122 DVTAIGSGGPYALAATRALLEYSELEPADIAKQALKIASDICIYTNDNITVEEI 175
>gi|78043411|ref|YP_360611.1| ATP-dependent protease peptidase subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|123575920|sp|Q3AB73|HSLV_CARHZ RecName: Full=ATP-dependent protease subunit HslV
gi|77995526|gb|ABB14425.1| ATP-dependent protease HslV [Carboxydothermus hydrogenoformans
Z-2901]
Length = 179
Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 132/175 (75%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ V++ G V I GDGQV+ GQ TV+K A K+R+L +G ++AGFAG+ ADAFTL
Sbjct: 2 FEGTTIVAVKRGGEVAIGGDGQVTFGQQTVIKRRANKIRKLYRGKVLAGFAGAVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ EKKLE+ L R++VEL K WR DK+LR LEAM+L+AD+ L+I+G G+V+EP+
Sbjct: 62 FDLFEKKLEESQGNLTRAAVELVKTWRTDKFLRRLEAMLLVADRERILLISGTGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
+GV+AIGSGG+YAL+AARAL++ N SA EI +++ IA +ICVYTN I +ET+
Sbjct: 122 DGVLAIGSGGNYALAAARALINHTNLSAREIVMESLKIAQEICVYTNDFITVETI 176
>gi|328675858|gb|AEB28533.1| ATP-dependent protease HslV [Francisella cf. novicida 3523]
Length = 183
Score = 194 bits (494), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTIL VRK VVI GDGQ +LG TV K N KVR+L G ++ GFAGS+ADAFTL
Sbjct: 4 IKGTTILCVRKGDKVVIGGDGQATLGHTVAKDNIVKVRKLNNGKVLTGFAGSTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
E+ E+KLE Y L R++VE+ ++WR+D+ L LEAMI++AD+ ++L+I+G GDV+ +
Sbjct: 64 EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIVVADEKLSLLISGAGDVMAADK 123
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N +++IGSG +YA SAA AL+ +T SAEEI RK+++IAAD C+YTNHN +E+L+
Sbjct: 124 NDIISIGSGSTYARSAATALIENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 179
>gi|78067910|ref|YP_370679.1| ATP-dependent protease peptidase subunit [Burkholderia sp. 383]
gi|123567386|sp|Q39BY1|HSLV_BURS3 RecName: Full=ATP-dependent protease subunit HslV
gi|77968655|gb|ABB10035.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Burkholderia sp. 383]
Length = 178
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ S EI K++ IA D+C+YTNHN ++ET++
Sbjct: 123 EGICAIGSGGAYAQAAARALAENTELSPREIVEKSLEIAGDMCIYTNHNRIIETIE 178
>gi|170703230|ref|ZP_02894033.1| 20S proteasome A and B subunits [Burkholderia ambifaria IOP40-10]
gi|170131863|gb|EDT00388.1| 20S proteasome A and B subunits [Burkholderia ambifaria IOP40-10]
Length = 178
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ S EI K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTELSPREIVEKSLGIAGDMCIYTNHNRIIETIE 178
>gi|222099124|ref|YP_002533692.1| ATP-dependent protease hslV [Thermotoga neapolitana DSM 4359]
gi|221571514|gb|ACM22326.1| ATP-dependent protease hslV [Thermotoga neapolitana DSM 4359]
Length = 179
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 133/174 (76%), Gaps = 1/174 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+K H TTIL VR+DG V+ GDGQV+ G TV+K NARKVR+LG+G ++AGFAGS ADA T
Sbjct: 4 MKFHGTTILVVRRDGKTVMGGDGQVTFGSTVLKGNARKVRKLGEGRVLAGFAGSVADAMT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L +R E KL ++ L +++VELAKDWR D+ LR LEA++L+AD+ +I+G G+V++P
Sbjct: 64 LFDRFEAKLREWGGNLTKAAVELAKDWRTDRILRRLEALLLVADRENIFIISGNGEVIQP 123
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLE 183
++ AIGSGG YAL+AA+AL+ +T SA EI KAM IA +IC+YTN N+V+E
Sbjct: 124 DDDAAAIGSGGPYALAAAKALLRNTDLSAREIVEKAMMIAGEICIYTNQNLVIE 177
>gi|171320570|ref|ZP_02909594.1| 20S proteasome A and B subunits [Burkholderia ambifaria MEX-5]
gi|172062040|ref|YP_001809692.1| ATP-dependent protease peptidase subunit [Burkholderia ambifaria
MC40-6]
gi|238065813|sp|B1YPR2|HSLV_BURA4 RecName: Full=ATP-dependent protease subunit HslV
gi|171094197|gb|EDT39280.1| 20S proteasome A and B subunits [Burkholderia ambifaria MEX-5]
gi|171994557|gb|ACB65476.1| 20S proteasome A and B subunits [Burkholderia ambifaria MC40-6]
Length = 178
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ S EI K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTELSPREIVEKSLEIAGDMCIYTNHNRIIETIE 178
>gi|27904994|ref|NP_778120.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
Bp (Baizongia pistaciae)]
gi|29839275|sp|P59581|HSLV_BUCBP RecName: Full=ATP-dependent protease subunit HslV
gi|27904392|gb|AAO27225.1| ATP-dependent protease HslV [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 176
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 128/171 (74%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR + VVI GDGQ +LG T++K+N +KVR L +IAGFAG +ADAFTL E
Sbjct: 2 TTILSVRLNKQVVIGGDGQATLGNTIIKSNVKKVRTLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKL Y QL RS++ELAKDWR DK LR LEA++ +ADK +L++TG GDV++PEN +M
Sbjct: 62 EKKLLMYQGQLQRSAIELAKDWRTDKILRKLEALLAVADKETSLIVTGNGDVIQPENNLM 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGGSYA +AA A++ +T +A++I KA+ I + IC+YTN+ ++ L
Sbjct: 122 AIGSGGSYAQAAAIAMIENTSLTAKQIVEKALKITSGICIYTNNIFTIKEL 172
>gi|303327044|ref|ZP_07357486.1| ATP-dependent protease HslV [Desulfovibrio sp. 3_1_syn3]
gi|302863032|gb|EFL85964.1| ATP-dependent protease HslV [Desulfovibrio sp. 3_1_syn3]
Length = 177
Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 136/174 (78%), Gaps = 2/174 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL V+K G V +AGDGQV+LGQT +MK A+KVRRL +G I+AGFAG++ADAFTL
Sbjct: 4 HATTILAVKKGGHVAMAGDGQVTLGQTMIMKHTAQKVRRLYEGRILAGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E E KL++ LLR++VE+ K+WR DKYLR LEAM+L+AD LV++G GDV+EP++
Sbjct: 64 ELFETKLKEVHGNLLRAAVEMTKEWRKDKYLRKLEAMLLLADNEHLLVVSGTGDVIEPDD 123
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG YAL+AARAL + AE +AR++M IA++ICVYTN ++ +ETL
Sbjct: 124 DVAAIGSGGPYALAAARALTRHSDLDAESVARESMRIASEICVYTNGHLTVETL 177
>gi|257419374|ref|ZP_05596368.1| 20S proteasome peptidase subunit [Enterococcus faecalis T11]
gi|257161202|gb|EEU91162.1| 20S proteasome peptidase subunit [Enterococcus faecalis T11]
Length = 182
Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 136/178 (76%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ ++ GFAGS ADAFT
Sbjct: 5 QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ +K L+++G G+V+ P
Sbjct: 65 LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 124
Query: 131 ENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG++ALSAARA+ + + SA+EIA+ A++IAADICV+TNHNI++E L
Sbjct: 125 DDGILAIGSGGNFALSAARAMKNFGDKEMSAKEIAKNALNIAADICVFTNHNIIVEEL 182
>gi|300309524|ref|YP_003773616.1| ATP-dependent protease HslVU peptidase subunit [Herbaspirillum
seropedicae SmR1]
gi|300072309|gb|ADJ61708.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit heat shock
protein [Herbaspirillum seropedicae SmR1]
Length = 178
Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG VMK +ARKVR+L G ++ GFAG +ADAFTL
Sbjct: 3 QFHGTTILSVRRGNQVALGGDGQVTLGNIVMKGSARKVRKLYHGKVLVGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LE E KLE++ L+R+SVELAKDWR D+ LR LEAM+L ADK TLVITG GDVLEP
Sbjct: 63 LELFEAKLEKHQGNLMRASVELAKDWRTDRMLRRLEAMLLCADKETTLVITGNGDVLEPN 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G+ AIGSGGSYA SAA+AL +T+ S EI +K+++IA ++C+YTN N ++ETL+
Sbjct: 123 DGIGAIGSGGSYAQSAAKALYENTELSPAEIVKKSLTIAGELCIYTNLNHIIETLE 178
>gi|315640717|ref|ZP_07895819.1| heat shock protein HslV [Enterococcus italicus DSM 15952]
gi|315483472|gb|EFU73966.1| heat shock protein HslV [Enterococcus italicus DSM 15952]
Length = 180
Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 131/176 (74%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
H+TTI V KDG +AGDGQV++G Q VMK ARKVRR+ ++ GFAGS ADAFTL
Sbjct: 5 FHSTTICAVEKDGKFAMAGDGQVTMGEQIVMKGTARKVRRIYNNQVVVGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL +Y L R++VELA++WR + ++ LEAM+++ ++ L+++G G+V+ P+
Sbjct: 65 EEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNEKEMLLVSGTGEVIAPD 124
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSAARA+ S SA+EIA A++IAADICV+TNHNI++E
Sbjct: 125 DGILAIGSGGNYALSAARAMKAYSPALSAKEIAENALNIAADICVFTNHNIIVEEF 180
>gi|52080217|ref|YP_079008.1| ATP-dependent protease peptidase subunit [Bacillus licheniformis
ATCC 14580]
gi|52785594|ref|YP_091423.1| ATP-dependent protease peptidase subunit [Bacillus licheniformis
ATCC 14580]
gi|319646004|ref|ZP_08000234.1| ATP-dependent protease hslV [Bacillus sp. BT1B_CT2]
gi|81609172|sp|Q65JN4|CLPQ_BACLD RecName: Full=ATP-dependent protease subunit ClpQ
gi|52003428|gb|AAU23370.1| two-component ATP-dependent protease (N-terminal serine protease)
[Bacillus licheniformis ATCC 14580]
gi|52348096|gb|AAU40730.1| ClpQ [Bacillus licheniformis ATCC 14580]
gi|317391754|gb|EFV72551.1| ATP-dependent protease hslV [Bacillus sp. BT1B_CT2]
Length = 181
Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ +G +AGDGQV+ GQ V MK ARKVR+L G +IAGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHNGKSAMAGDGQVTFGQAVVMKHTARKVRKLFNGKVIAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VELAK+WR DK LR LEAM+++ + L+++G G+V+EP+
Sbjct: 64 FEMFEAKLEEYNGNLQRAAVELAKEWRSDKVLRKLEAMLIVMNADSMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG+YAL+A RAL +Q A+ IAR ++ A +ICVYTN I++E L+
Sbjct: 124 DGILAIGSGGNYALAAGRALKRHAGSQLDAKAIARASLETAGEICVYTNDQIIVEELE 181
>gi|115353189|ref|YP_775028.1| ATP-dependent protease peptidase subunit [Burkholderia ambifaria
AMMD]
gi|122321967|sp|Q0BAX9|HSLV_BURCM RecName: Full=ATP-dependent protease subunit HslV
gi|115283177|gb|ABI88694.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Burkholderia ambifaria AMMD]
Length = 178
Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ S EI K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTELSPREIVEKSLEIAGDMCIYTNHNRIIETIE 178
>gi|121533769|ref|ZP_01665596.1| transcriptional regulator, Fis family [Thermosinus carboxydivorans
Nor1]
gi|121307760|gb|EAX48675.1| transcriptional regulator, Fis family [Thermosinus carboxydivorans
Nor1]
Length = 176
Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ VR G IAGDGQV+ G TVMK NA+KVRRL G I+AGFAGS ADAFTL
Sbjct: 2 FHATTIVAVRHKGKTAIAGDGQVTFGGNTVMKHNAKKVRRLYHGKILAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ E KLE++ L+R++VELAK+WRMDK LR LEA++++ D L+I+G G+V+EP+
Sbjct: 62 FGKFESKLEEFNGNLMRAAVELAKEWRMDKVLRRLEALLIVCDAQSMLIISGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG YAL+AARAL SA EIAR+A+ IAA ICVYTN+ I +E L
Sbjct: 122 DGITAIGSGGPYALAAARALAKYSGLSAAEIAREALQIAASICVYTNNQITVEEL 176
>gi|134297265|ref|YP_001121000.1| ATP-dependent protease peptidase subunit [Burkholderia
vietnamiensis G4]
gi|166221630|sp|A4JIR2|HSLV_BURVG RecName: Full=ATP-dependent protease subunit HslV
gi|134140422|gb|ABO56165.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Burkholderia vietnamiensis G4]
Length = 178
Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T S EI K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTDMSPREIVEKSLEIAGDMCIYTNHNRIIETIE 178
>gi|153840197|ref|ZP_01992864.1| ATP-dependent protease HslV [Vibrio parahaemolyticus AQ3810]
gi|149746139|gb|EDM57269.1| ATP-dependent protease HslV [Vibrio parahaemolyticus AQ3810]
Length = 176
Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/165 (60%), Positives = 130/165 (78%), Gaps = 1/165 (0%)
Query: 22 RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
R++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ERLE KL+
Sbjct: 1 RRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERLESKLQM 60
Query: 82 YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
+ L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG
Sbjct: 61 HQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGG 120
Query: 142 SYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+YA +AA AL+ +T A EIA KA++IA DICV+TNH+ +E L
Sbjct: 121 AYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEEL 165
>gi|313895640|ref|ZP_07829196.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas sp.
oral taxon 137 str. F0430]
gi|312975766|gb|EFR41225.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas sp.
oral taxon 137 str. F0430]
Length = 179
Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ G+ +MKA ARKVRRL G I+AGFAGS ADAFTL
Sbjct: 3 FHATTIVAVKKGNKVAIAGDGQVTFGERAIMKATARKVRRLYHGKILAGFAGSVADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE Y L R++VELAKDWR DK LR LEA++L+ADK L+I+G G+V+EP+
Sbjct: 63 FEKFEAKLESYSGNLQRAAVELAKDWRTDKVLRKLEALLLVADKDGILMISGNGEVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG +AL+AARAL + A +A+++++IAADICVYTNHNI +E L+
Sbjct: 123 GDCTAIGSGGFFALAAARALTLHSDMDAPAVAKESLAIAADICVYTNHNITVEVLE 178
>gi|254369291|ref|ZP_04985303.1| ATP-dependent protease HslVU [Francisella tularensis subsp.
holarctica FSC022]
gi|157122241|gb|EDO66381.1| ATP-dependent protease HslVU [Francisella tularensis subsp.
holarctica FSC022]
Length = 183
Score = 194 bits (492), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTIL VRK VVI GDGQ +LG T+ K N KVR+L G ++ GFAGS+ADAFTL
Sbjct: 4 IRGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
E+ E+KLE Y L R++VE+ ++WR+D+ L LEAMI++AD+ ++L+I+G GDV+ +
Sbjct: 64 EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVADEKLSLLISGAGDVMAADK 123
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N +++IGSG +YA SAA AL+ +T SAEEI RK+++IAAD C+YTNHN +E+L+
Sbjct: 124 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 179
>gi|89256314|ref|YP_513676.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. holarctica LVS]
gi|118497587|ref|YP_898637.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. novicida U112]
gi|134302009|ref|YP_001121978.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. tularensis WY96-3418]
gi|167010171|ref|ZP_02275102.1| ATP-dependent protease HslV [Francisella tularensis subsp.
holarctica FSC200]
gi|187931846|ref|YP_001891831.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. mediasiatica FSC147]
gi|195536285|ref|ZP_03079292.1| ATP-dependent protease HslV [Francisella tularensis subsp. novicida
FTE]
gi|208779387|ref|ZP_03246733.1| ATP-dependent protease HslV [Francisella novicida FTG]
gi|224456877|ref|ZP_03665350.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. tularensis MA00-2987]
gi|254367646|ref|ZP_04983667.1| T01 family hslV component of hslUV peptidase (clpQ) [Francisella
tularensis subsp. holarctica 257]
gi|254370305|ref|ZP_04986310.1| ATP-dependent protease HslVU [Francisella tularensis subsp.
tularensis FSC033]
gi|254372952|ref|ZP_04988441.1| hypothetical protein FTCG_00523 [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374403|ref|ZP_04989885.1| ATP dependent protease HslV [Francisella novicida GA99-3548]
gi|254874622|ref|ZP_05247332.1| hslV, ATP-dependent protease, proteasome-related peptidase subunit
[Francisella tularensis subsp. tularensis MA00-2987]
gi|290953148|ref|ZP_06557769.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. holarctica URFT1]
gi|295313676|ref|ZP_06804260.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. holarctica URFT1]
gi|89144145|emb|CAJ79404.1| ATP-dependent protease, proteasome-related peptidase subunit
[Francisella tularensis subsp. holarctica LVS]
gi|118423493|gb|ABK89883.1| ATP-dependent protease HslVU, peptidase subunit [Francisella
novicida U112]
gi|134049786|gb|ABO46857.1| ATP dependent protease HslV [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134253457|gb|EBA52551.1| T01 family hslV component of hslUV peptidase (clpQ) [Francisella
tularensis subsp. holarctica 257]
gi|151568548|gb|EDN34202.1| ATP-dependent protease HslVU [Francisella tularensis subsp.
tularensis FSC033]
gi|151570679|gb|EDN36333.1| hypothetical protein FTCG_00523 [Francisella novicida GA99-3549]
gi|151572123|gb|EDN37777.1| ATP dependent protease HslV [Francisella novicida GA99-3548]
gi|187712755|gb|ACD31052.1| ATP-dependent protease HslV, peptidase subunit [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194372762|gb|EDX27473.1| ATP-dependent protease HslV [Francisella tularensis subsp. novicida
FTE]
gi|208745187|gb|EDZ91485.1| ATP-dependent protease HslV [Francisella novicida FTG]
gi|254840621|gb|EET19057.1| hslV, ATP-dependent protease, proteasome-related peptidase subunit
[Francisella tularensis subsp. tularensis MA00-2987]
gi|332678289|gb|AEE87418.1| ATP-dependent protease HslV [Francisella cf. novicida Fx1]
Length = 183
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTIL VRK VVI GDGQ +LG T+ K N KVR+L G ++ GFAGS+ADAFTL
Sbjct: 4 IKGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
E+ E+KLE Y L R++VE+ ++WR+D+ L LEAMI++AD+ ++L+I+G GDV+ +
Sbjct: 64 EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVADEKLSLLISGAGDVMAADK 123
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N +++IGSG +YA SAA AL+ +T SAEEI RK+++IAAD C+YTNHN +E+L+
Sbjct: 124 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 179
>gi|332288324|ref|YP_004419176.1| ATP-dependent protease peptidase subunit [Gallibacterium anatis
UMN179]
gi|330431220|gb|AEC16279.1| ATP-dependent protease peptidase subunit [Gallibacterium anatis
UMN179]
Length = 174
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 130/172 (75%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVVGGDGQVSLGNTVMKGNARKVRRLYGDKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
E+KLE + LL+S+VELAK+WR D+ LR LEAM+++AD +L+ITG+GDV++P E+ +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKEWRTDRALRKLEAMLIVADAKESLIITGLGDVVQPEEDQI 121
Query: 135 MAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+Y +A + +T SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYAMAAARALVANTDLSAREIVEKSLKIAGDICVFTNTNFTIEEL 173
>gi|167835015|ref|ZP_02461898.1| ATP-dependent protease peptidase subunit [Burkholderia
thailandensis MSMB43]
Length = 178
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADATSTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T S EI KA+ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTDLSPREIVEKALEIAGDMCIYTNHNRIIETIE 178
>gi|319892268|ref|YP_004149143.1| ATP-dependent protease HslV [Staphylococcus pseudintermedius
HKU10-03]
gi|317161964|gb|ADV05507.1| ATP-dependent protease HslV [Staphylococcus pseudintermedius
HKU10-03]
gi|323464635|gb|ADX76788.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
pseudintermedius ED99]
Length = 180
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 132/176 (75%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LG+ V MK A+KVR+L G +IAGFAGS ADAFTL
Sbjct: 5 IHATTIYAVRHNGGAAMAGDGQVTLGEKVIMKQTAKKVRKLYNGKVIAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+QY L R++VELAK+WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 65 FEKFEAKLQQYSGNLERAAVELAKEWRGDKQLRQLEAMLIVMDKEHILVVSGTGEVIAPD 124
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG++ALSA RA ++ SA E+A +++ +A+DICV+TN +I +E L
Sbjct: 125 DDLIAIGSGGNFALSAGRAFKRHASHLSAREMAYESLKVASDICVFTNDHITVEEL 180
>gi|90408770|ref|ZP_01216915.1| ATP-dependent protease peptidase subunit [Psychromonas sp. CNPT3]
gi|90310114|gb|EAS38254.1| ATP-dependent protease peptidase subunit [Psychromonas sp. CNPT3]
Length = 179
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 127/171 (74%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VV+ GDGQVSLG TVMK+NARKV RL +IAGFAG +ADAFTLLER
Sbjct: 2 TTIVSVRRGNQVVVGGDGQVSLGNTVMKSNARKVHRLYNNQVIAGFAGGTADAFTLLERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L R++VELAKDWR DK LR LEA++ +AD + +ITG GDV+ PEN ++
Sbjct: 62 EAKLQAHQGNLERAAVELAKDWRTDKMLRRLEALLAVADAKHSYIITGNGDVIRPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T A+ I KA++IA +ICV+TN +E +
Sbjct: 122 AIGSGGNFAQSAAMALLENTDLDAKTIVEKALTIAGNICVFTNTTQTIEVI 172
>gi|89902205|ref|YP_524676.1| ATP-dependent protease peptidase subunit [Rhodoferax ferrireducens
T118]
gi|122478440|sp|Q21SV8|HSLV_RHOFD RecName: Full=ATP-dependent protease subunit HslV
gi|89346942|gb|ABD71145.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodoferax ferrireducens T118]
Length = 182
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 137/179 (76%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRK---DGV-VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTI++VR+ +G V I GDGQV+LG V+K ARKVR+L G ++AGFAG++AD
Sbjct: 3 QFHGTTIISVRRKTPEGYSVAIGGDGQVTLGNIVVKGTARKVRKLYHGKVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ L+R+++EL KDWR D+ LR LEAM+ +AD +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGHLVRAAIELTKDWRTDRVLRRLEAMLAVADSEASLIITGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPENG++ IGSGG+YA +AA AL++ T+ SA EI +K++ IAA+IC+YTN + +ETL
Sbjct: 123 LEPENGIVTIGSGGAYAQAAAMALLNHTEMSAPEIVKKSLEIAAEICIYTNMSHTIETL 181
>gi|194333991|ref|YP_002015851.1| ATP-dependent protease peptidase subunit [Prosthecochloris
aestuarii DSM 271]
gi|238693333|sp|B4S817|HSLV_PROA2 RecName: Full=ATP-dependent protease subunit HslV
gi|194311809|gb|ACF46204.1| 20S proteasome A and B subunits [Prosthecochloris aestuarii DSM
271]
Length = 182
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 131/173 (75%), Gaps = 1/173 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ ATT+L V ++G + DGQ++LG TV+K + +K+RR+ N+I GFAG++ADA TL
Sbjct: 8 QLRATTVLGVIRNGKAALGSDGQMTLGNTVIKHSTKKIRRIQHANLITGFAGATADAVTL 67
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R ++KL+ + QL RS+VELA+DWR DKYLR LEAM+ + L+I+G GDV+EPE
Sbjct: 68 LDRFDEKLQAFGGQLERSAVELARDWRTDKYLRRLEAMLAVVSADKALIISGTGDVIEPE 127
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLE 183
+G++AIGSG YALSAARAL+ T SA EI +++ IAADIC+YTN +IV+E
Sbjct: 128 DGIVAIGSGSMYALSAARALIRYTDLSAREIVTESLKIAADICIYTNDHIVVE 180
>gi|15615027|ref|NP_243330.1| ATP-dependent protease peptidase subunit [Bacillus halodurans
C-125]
gi|11133069|sp|Q9KA26|HSLV_BACHD RecName: Full=ATP-dependent protease subunit HslV
gi|10175084|dbj|BAB06183.1| beta-type subunit of the 20S proteasome [Bacillus halodurans C-125]
Length = 180
Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 129/176 (73%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI + +G +AGDGQV+ G V MK ARKVR++ G ++AGFAGS ADAFTL
Sbjct: 5 FHATTIFAIHHNGKCAMAGDGQVTFGNAVVMKHTARKVRKIYHGKVLAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE++ L RS+VE+AK+WR DK LR LEAM+++ ++ L+++G G+V+EP+
Sbjct: 65 FEKFEAKLEEFNGNLQRSAVEVAKEWRSDKVLRRLEAMLIVMNEEHLLLVSGTGEVIEPD 124
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YAL+A RAL + Q SA EIA+ A+ A DICVYTN +++E L
Sbjct: 125 DGILAIGSGGNYALAAGRALKKKAPQLSAREIAQAALETAGDICVYTNDQLIVEEL 180
>gi|217076580|ref|YP_002334296.1| ATP-dependent protease peptidase subunit [Thermosipho africanus
TCF52B]
gi|226704548|sp|B7IFU1|HSLV_THEAB RecName: Full=ATP-dependent protease subunit HslV
gi|217036433|gb|ACJ74955.1| heat shock protein HslV [Thermosipho africanus TCF52B]
Length = 176
Score = 193 bits (491), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+K +TT++ VR++ VV+ DGQV+ G T++K NA+KVR++G GN++AGFAGS ADA
Sbjct: 1 MKWRSTTVVCVRRNDSVVMISDGQVTYGNTILKGNAKKVRKMGDGNVLAGFAGSVADAMA 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L +R E K ++ LL+++VELAKDWR D+ LR LEAM+L+ADK T +++G G+V++P
Sbjct: 61 LFDRFEAKYREWGGNLLKAAVELAKDWRTDRVLRRLEAMLLVADKKYTFIVSGTGEVIQP 120
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E+ + +IGSG YA++A +AL+ T SA+EIA +A+ IA++IC+YTN N +E L
Sbjct: 121 EDDIASIGSGSPYAIAAGKALLRHTDLSAKEIALEAIKIASEICIYTNDNFTIEEL 176
>gi|194336303|ref|YP_002018097.1| 20S proteasome A and B subunits [Pelodictyon phaeoclathratiforme
BU-1]
gi|238693421|sp|B4SGR7|HSLV_PELPB RecName: Full=ATP-dependent protease subunit HslV
gi|194308780|gb|ACF43480.1| 20S proteasome A and B subunits [Pelodictyon phaeoclathratiforme
BU-1]
Length = 182
Score = 193 bits (491), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 131/172 (76%), Gaps = 1/172 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ +TT++ V +DG + DGQ++LG TV+K + RK+RRL G ++AGFAG++ADA TLL
Sbjct: 9 IRSTTVIGVIRDGKAALGSDGQMTLGNTVIKHSTRKIRRLYHGKLVAGFAGATADAVTLL 68
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+R E+KLE Y +L R++VELA+DWR DKYLR LEAM+ I L+I+G GDV+EPE+
Sbjct: 69 DRFEEKLEAYNGKLDRAAVELARDWRTDKYLRRLEAMLAIVSHDKALIISGTGDVIEPED 128
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLE 183
G++AIGSG YAL+AAR+LM + A+EI +++ IAADIC+YTN +I++E
Sbjct: 129 GIVAIGSGSMYALAAARSLMKHSSLPAKEIVLESLKIAADICIYTNDHIIVE 180
>gi|257867812|ref|ZP_05647465.1| 20S proteasome protein [Enterococcus casseliflavus EC30]
gi|257874139|ref|ZP_05653792.1| 20S proteasome protein [Enterococcus casseliflavus EC10]
gi|257876704|ref|ZP_05656357.1| 20S proteasome protein [Enterococcus casseliflavus EC20]
gi|325570910|ref|ZP_08146559.1| heat shock protein HslV [Enterococcus casseliflavus ATCC 12755]
gi|257801895|gb|EEV30798.1| 20S proteasome protein [Enterococcus casseliflavus EC30]
gi|257808303|gb|EEV37125.1| 20S proteasome protein [Enterococcus casseliflavus EC10]
gi|257810870|gb|EEV39690.1| 20S proteasome protein [Enterococcus casseliflavus EC20]
gi|325156314|gb|EGC68497.1| heat shock protein HslV [Enterococcus casseliflavus ATCC 12755]
Length = 180
Score = 193 bits (491), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 131/177 (74%), Gaps = 3/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI V KDG +AGDGQV++G Q VMK ARKVRR+ G +I GFAGS ADAFT
Sbjct: 4 EFHSTTICAVEKDGKFAMAGDGQVTMGEQVVMKGTARKVRRIYNGEVIVGFAGSVADAFT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ + L+++G G+V+ P
Sbjct: 64 LEEKFEGKLNEYNGNLQRAAVELAQEWRTQQSMQKLEAMLIVMNDKEMLLVSGTGEVISP 123
Query: 131 ENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ G++AIGSGG+YAL+AARA+ + SA+EIA A++IAADICV+TNHNI++E
Sbjct: 124 DEGILAIGSGGNYALAAARAMKRYGGELSAKEIAEGALNIAADICVFTNHNIIVEEF 180
>gi|24215046|ref|NP_712527.1| ATP-dependent protease peptidase subunit [Leptospira interrogans
serovar Lai str. 56601]
gi|45657472|ref|YP_001558.1| ATP-dependent protease peptidase subunit [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|47605706|sp|Q8F3Q4|HSLV_LEPIN RecName: Full=ATP-dependent protease subunit HslV
gi|85542203|sp|Q72RY8|HSLV_LEPIC RecName: Full=ATP-dependent protease subunit HslV
gi|24196096|gb|AAN49545.1| ATP-dependent protease peptidase subunit [Leptospira interrogans
serovar Lai str. 56601]
gi|45600711|gb|AAS70195.1| ATP-dependent HslUV protease peptidase subunit [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 180
Score = 193 bits (491), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 136/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TTIL VRK+G V I GDGQVS+G TVMK A+K+RRL G I++GFAGS+ADAFTL
Sbjct: 5 KIRSTTILCVRKNGKVAIGGDGQVSMGNTVMKNTAKKIRRLYDGKILSGFAGSAADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E EKK++++ L RS+VELA++WR D+ LR LEA++++ADK + +I+G GDV+ P+
Sbjct: 65 FELFEKKVQEFGGSLSRSAVELAREWRTDRMLRRLEALLIVADKEESFLISGTGDVISPD 124
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
GV+AIGSGG+YAL+AARAL N S +EI +M IAADIC+YTN++I LE +
Sbjct: 125 EGVIAIGSGGNYALAAARALYDHTNLSPKEIVESSMKIAADICIYTNNHITLEEI 179
>gi|159901850|gb|ABX10585.1| ATP-dependent protease [uncultured planctomycete 5H12]
Length = 206
Score = 193 bits (491), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D +K+HATTILTV G V + GDGQV+LG VMK +A K+R+L G ++ GFAGSS
Sbjct: 22 DWKQKMKIHATTILTVEHQGSVAMGGDGQVTLGNAVMKTDAMKIRKLLGGRVLCGFAGSS 81
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAF LLER E++L+ P + R++ ELA+ WR DK LR LEA++ + D TL+I+G G
Sbjct: 82 ADAFALLERFEEQLKDSPENIPRAATELARQWRTDKALRQLEALLTVTDGKNTLLISGTG 141
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLET 184
DV++P +GV+ IGSGG+YA++AARAL +Q SA EI +++ IA I +YTN NI++ET
Sbjct: 142 DVIQPTDGVVGIGSGGNYAIAAARALKEHSQLSASEIVVESLKIAGGIDIYTNTNIIVET 201
Query: 185 L 185
L
Sbjct: 202 L 202
>gi|299135731|ref|ZP_07028915.1| 20S proteasome A and B subunits [Acidobacterium sp. MP5ACTX8]
gi|298601855|gb|EFI58009.1| 20S proteasome A and B subunits [Acidobacterium sp. MP5ACTX8]
Length = 254
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/183 (52%), Positives = 138/183 (75%), Gaps = 5/183 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT++ VR+ +V+A DGQV+LG TVMK +A+K+RRL I+AGFAGS+ADAF+L
Sbjct: 72 RVRSTTVICVRRGDSMVMAADGQVTLGSTVMKHSAKKIRRLYNEKILAGFAGSTADAFSL 131
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
R E KLEQY L RS+VELAKDWR DK LR L+A++++AD +++G GDV+EP+
Sbjct: 132 FTRFEAKLEQYGGNLGRSAVELAKDWRTDKLLRQLQALLIVADTKQMFLLSGDGDVIEPD 191
Query: 132 ---NGVMA-IGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++A IGSGGS+AL+AA ALM +TQ +A EI ++M IAA+IC+Y+N ++ +E LK
Sbjct: 192 AVGDGLIATIGSGGSFALAAATALMENTQMTAREIVERSMKIAAEICIYSNQSVTIEELK 251
Query: 187 VGD 189
+
Sbjct: 252 AAE 254
>gi|163781960|ref|ZP_02176960.1| ATP-dependent protease peptidase subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159883180|gb|EDP76684.1| ATP-dependent protease peptidase subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 176
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 135/173 (78%), Gaps = 1/173 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
+TTIL VRK+G VI GDGQV++G +V+K +ARK+RRL K +I GFAGS+AD L+E
Sbjct: 4 RSTTILAVRKNGETVIGGDGQVTVGSSVIKHSARKIRRLYKEQVIVGFAGSAADGLALME 63
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE+KLE++ LLR+SVELAKDWRMDKYLR LEA++L D+ L+++G GD++EP+
Sbjct: 64 RLEQKLEEFRGNLLRASVELAKDWRMDKYLRRLEALLLAVDREHMLLLSGNGDIIEPDEP 123
Query: 134 VMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ IGSGG YA SAA AL +T SAEEI RK++ IA++ICVYTN ++V+E L
Sbjct: 124 VLGIGSGGDYARSAALALYRNTDMSAEEIVRKSLEIASEICVYTNSSLVIEKL 176
>gi|115314759|ref|YP_763482.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. holarctica OSU18]
gi|156502383|ref|YP_001428448.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. holarctica FTNF002-00]
gi|115129658|gb|ABI82845.1| T01 family HslV component of HslUV peptidase (ClpQ) [Francisella
tularensis subsp. holarctica OSU18]
gi|156252986|gb|ABU61492.1| peptidase, T1 family [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 190
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTIL VRK VVI GDGQ +LG T+ K N KVR+L G ++ GFAGS+ADAFTL
Sbjct: 11 IKGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 70
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
E+ E+KLE Y L R++VE+ ++WR+D+ L LEAMI++AD+ ++L+I+G GDV+ +
Sbjct: 71 EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVADEKLSLLISGAGDVMAADK 130
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N +++IGSG +YA SAA AL+ +T SAEEI RK+++IAAD C+YTNHN +E+L+
Sbjct: 131 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 186
>gi|161526255|ref|YP_001581267.1| ATP-dependent protease peptidase subunit [Burkholderia multivorans
ATCC 17616]
gi|189349031|ref|YP_001944659.1| ATP-dependent protease peptidase subunit [Burkholderia multivorans
ATCC 17616]
gi|221201906|ref|ZP_03574943.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia multivorans CGD2M]
gi|221207588|ref|ZP_03580596.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia multivorans CGD2]
gi|221215813|ref|ZP_03588772.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia multivorans CGD1]
gi|238065816|sp|A9AC32|HSLV_BURM1 RecName: Full=ATP-dependent protease subunit HslV
gi|160343684|gb|ABX16770.1| 20S proteasome A and B subunits [Burkholderia multivorans ATCC
17616]
gi|189333053|dbj|BAG42123.1| ATP-dependent HslUV protease subunit HslV [Burkholderia multivorans
ATCC 17616]
gi|221164349|gb|EED96836.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia multivorans CGD1]
gi|221172434|gb|EEE04873.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia multivorans CGD2]
gi|221178326|gb|EEE10736.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia multivorans CGD2M]
Length = 178
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADANTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTELSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|332297604|ref|YP_004439526.1| ATP-dependent protease hslV [Treponema brennaborense DSM 12168]
gi|332180707|gb|AEE16395.1| ATP-dependent protease hslV [Treponema brennaborense DSM 12168]
Length = 179
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TT++ VRK+G V +AGDGQV++G+TVMK NARKVRRL G ++ GFAG++ADAF L
Sbjct: 5 KIRSTTVIAVRKNGRVAMAGDGQVTMGETVMKGNARKVRRLYDGKVLTGFAGATADAFNL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E K++++ L R++VELAK WR DK LR LEA++L+ADK L+I+G GDV+EPE
Sbjct: 65 FDKFEIKIKEFAGDLTRAAVELAKQWRTDKALRQLEALLLVADKDKILLISGTGDVIEPE 124
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
N V+AIGSGG+YA +AA A + + + A+EIA K++ IA +IC+YTN++I +E L
Sbjct: 125 NDVLAIGSGGNYAYAAALAYLDSSDLGAKEIAEKSLKIAGNICIYTNNHITVEEL 179
>gi|188590937|ref|YP_001795537.1| ATP-dependent protease peptidase subunit [Cupriavidus taiwanensis
LMG 19424]
gi|238065852|sp|B2AGB6|HSLV_CUPTR RecName: Full=ATP-dependent protease subunit HslV
gi|170937831|emb|CAP62815.1| peptidase component of the HslUV protease [Cupriavidus taiwanensis
LMG 19424]
Length = 178
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ G ++ GFAGS+ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRRIYNGKVLVGFAGSTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE+Y L R++V+LAKDWR D+ LR LEAM++ AD+ TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKYQGNLTRAAVDLAKDWRSDRALRRLEAMLITADRDTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAA+ALM +T+ + +++ KA++IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALMENTEMAPKDVVEKALTIAGELCIYTNTNFVIETLE 178
>gi|30250192|ref|NP_842262.1| ATP-dependent protease peptidase subunit [Nitrosomonas europaea
ATCC 19718]
gi|47605675|sp|Q82SP7|HSLV_NITEU RecName: Full=ATP-dependent protease subunit HslV
gi|30180987|emb|CAD86172.1| Multispecific proteasome proteases [Nitrosomonas europaea ATCC
19718]
Length = 173
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ V + GDGQV+LG V KA+ARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGRQVALGGDGQVTLGAVVAKASARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE++ L+RS+VELAKDWR D+ LR LEAM+++AD TL+ITG GDV+EPE G+
Sbjct: 62 EAKLEKHQGHLMRSAVELAKDWRTDRILRRLEAMLVVADHEATLIITGAGDVIEPEQGIA 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AARAL+ +T S +EI KA++IA DIC+YTN V+E L
Sbjct: 122 AIGSGGAYAQAAARALLENTDLSPKEIVTKALTIAGDICIYTNQVHVIEQL 172
>gi|46579988|ref|YP_010796.1| ATP-dependent protease peptidase subunit [Desulfovibrio vulgaris
str. Hildenborough]
gi|120602600|ref|YP_967000.1| ATP-dependent protease peptidase subunit [Desulfovibrio vulgaris
DP4]
gi|85542201|sp|Q72BQ7|HSLV_DESVH RecName: Full=ATP-dependent protease subunit HslV
gi|166221637|sp|A1VDQ7|HSLV_DESVV RecName: Full=ATP-dependent protease subunit HslV
gi|46449404|gb|AAS96055.1| ATP-dependent protease hslV [Desulfovibrio vulgaris str.
Hildenborough]
gi|120562829|gb|ABM28573.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Desulfovibrio vulgaris DP4]
gi|311234014|gb|ADP86868.1| 20S proteasome A and B subunits [Desulfovibrio vulgaris RCH1]
Length = 181
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/176 (55%), Positives = 130/176 (73%), Gaps = 2/176 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTIL VR V IAGDGQV++GQ+ VMK +ARKVRRL G ++AGFAGS+ADAF
Sbjct: 1 MELKGTTILAVRGAQGVTIAGDGQVTMGQSIVMKHSARKVRRLYNGRVVAGFAGSTADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E E KLE++ L+R++VE+AK WR DKYLR LEAM+L+AD LV++G GDV+E
Sbjct: 61 TLFEHFEAKLEEHRGNLVRAAVEMAKSWRKDKYLRRLEAMLLVADNEHILVLSGNGDVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
P++G+ AIGSGG Y +A TQ AE IAR+AM IA +ICV+TN ++ +E+
Sbjct: 121 PDDGIAAIGSGGPYALAAARALARHTQLDAETIAREAMRIAGEICVFTNDHLTVES 176
>gi|229577466|ref|YP_001170893.2| ATP-dependent protease peptidase subunit [Pseudomonas stutzeri
A1501]
gi|327479008|gb|AEA82318.1| ATP-dependent protease peptidase subunit [Pseudomonas stutzeri DSM
4166]
Length = 178
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 135/173 (78%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV++PE+ ++
Sbjct: 62 EGQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
A+GSGG +A +AA+AL+ SA+EIA A++IA ICV+TN N+ +E L
Sbjct: 122 AMGSGGGFAQAAAKALLLKAGADMSAQEIAETALNIAGSICVFTNQNLTIEEL 174
>gi|325525687|gb|EGD03447.1| ATP-dependent protease subunit HslV [Burkholderia sp. TJI49]
Length = 178
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ S +I K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTELSPRDIVEKSLEIAGDMCIYTNHNRIIETIE 178
>gi|311747699|ref|ZP_07721484.1| heat shock protein HslVU, ATPase subunit HslV [Algoriphagus sp.
PR1]
gi|126575687|gb|EAZ79997.1| heat shock protein HslVU, ATPase subunit HslV [Algoriphagus sp.
PR1]
Length = 179
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 131/174 (75%), Gaps = 2/174 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT++ +R +G VVI DGQ +LG TV K+ +K+R L G I+ GFAGS+ADAFTL
Sbjct: 3 RIKSTTVVAIRHNGEVVIGADGQATLGNTVAKSTVKKLRVLQGGKIVTGFAGSTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LE+ E+KL + N + R++VELAK+WR D+ L LEAM+++AD+ L+I+G GDV+EP+
Sbjct: 63 LEKFEEKLGAFGNNMKRAAVELAKEWRTDRMLSKLEAMMIVADQDDILIISGTGDVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
+ IGSG YA SAARA+ + Q SAEE+ R++++IAAD+C+YTNHN+V+E
Sbjct: 123 MEIATIGSGSMYAQSAARAMKQFAPQMSAEEMVRESLNIAADVCIYTNHNLVIE 176
>gi|190575907|ref|YP_001973752.1| ATP-dependent protease peptidase subunit [Stenotrophomonas
maltophilia K279a]
gi|194367244|ref|YP_002029854.1| ATP-dependent protease peptidase subunit [Stenotrophomonas
maltophilia R551-3]
gi|254521094|ref|ZP_05133149.1| ATP-dependent protease HslV [Stenotrophomonas sp. SKA14]
gi|229486364|sp|B2FUV7|HSLV_STRMK RecName: Full=ATP-dependent protease subunit HslV
gi|238065942|sp|B4SJN0|HSLV_STRM5 RecName: Full=ATP-dependent protease subunit HslV
gi|190013829|emb|CAQ47467.1| putative heat shock protein [Stenotrophomonas maltophilia K279a]
gi|194350048|gb|ACF53171.1| 20S proteasome A and B subunits [Stenotrophomonas maltophilia
R551-3]
gi|219718685|gb|EED37210.1| ATP-dependent protease HslV [Stenotrophomonas sp. SKA14]
Length = 183
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 140/175 (80%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
HATTI+ VR+ V IAGDGQV+LG TVMK NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 FHATTIVCVRRGEHVAIAGDGQVTLGHTVMKGNARKVRRLGRDGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+G GDV+EPE
Sbjct: 70 FELFEAKLEKH-GQLQRAAVELAKDWRTERRLGKLEALLAVADKETSLIISGTGDVIEPE 128
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSYALSAARALM+ T+ A IA +A+ IA DIC+YTN N+V+E L
Sbjct: 129 DGIIAIGSGGSYALSAARALMAHTELDARTIASEAIGIAGDICIYTNRNVVVEEL 183
>gi|227551196|ref|ZP_03981245.1| T01 family HslV component of HslUV peptidase [Enterococcus faecium
TX1330]
gi|257887687|ref|ZP_05667340.1| 20S proteasome protein [Enterococcus faecium 1,141,733]
gi|257896181|ref|ZP_05675834.1| 20S proteasome protein [Enterococcus faecium Com12]
gi|257898818|ref|ZP_05678471.1| 20S proteasome protein [Enterococcus faecium Com15]
gi|293377181|ref|ZP_06623389.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium PC4.1]
gi|293570279|ref|ZP_06681348.1| ATP-dependent protease HslV [Enterococcus faecium E980]
gi|227179664|gb|EEI60636.1| T01 family HslV component of HslUV peptidase [Enterococcus faecium
TX1330]
gi|257823741|gb|EEV50673.1| 20S proteasome protein [Enterococcus faecium 1,141,733]
gi|257832746|gb|EEV59167.1| 20S proteasome protein [Enterococcus faecium Com12]
gi|257836730|gb|EEV61804.1| 20S proteasome protein [Enterococcus faecium Com15]
gi|291609686|gb|EFF38947.1| ATP-dependent protease HslV [Enterococcus faecium E980]
gi|292644201|gb|EFF62303.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium PC4.1]
Length = 182
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 136/177 (76%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ G ++ GFAGS ADAFTL
Sbjct: 6 FHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNGEVVVGFAGSVADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL +Y L R++VELA++WR + ++ LEAM+++ ++ L+++G G+V+ P+
Sbjct: 66 EEKFEGKLNEYNGNLQRAAVELAQEWRTQQSMQKLEAMLIVMNEKEMLLVSGTGEVITPD 125
Query: 132 NGVMAIGSGGSYALSAARALMS-TQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG++AL+AARA+ + QN SA+EIA A++IAADIC++TNHNI++E L
Sbjct: 126 DGILAIGSGGNFALAAARAMKNYAQNDMSAKEIAENALNIAADICIFTNHNIIVEEL 182
>gi|23099004|ref|NP_692470.1| ATP-dependent protease peptidase subunit [Oceanobacillus iheyensis
HTE831]
gi|47605697|sp|Q8CXH2|HSLV_OCEIH RecName: Full=ATP-dependent protease subunit HslV
gi|22777232|dbj|BAC13505.1| ATP-dependent protease (heat shock protein HslV) [Oceanobacillus
iheyensis HTE831]
Length = 181
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 131/179 (73%), Gaps = 3/179 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
++MHATTI V+ G + GDGQV+LG +V MK A+KVR L G ++AGFAGS ADAF
Sbjct: 3 MEMHATTIFAVQHQGQSAMCGDGQVTLGNSVVMKHKAKKVRTLYNGKVLAGFAGSVADAF 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL+ + L R+SVELA++WR DK LR LEAM+++ +K +++G G+V+E
Sbjct: 63 TLFEKFETKLQSFNGNLTRASVELAQEWRSDKVLRKLEAMLIVMNKEHMYLVSGTGEVIE 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETLK 186
P++G++AIGSGG+YALSA RAL+ + SA +IAR A+ +A +ICV+TN I LE L+
Sbjct: 123 PDDGILAIGSGGNYALSAGRALVRYADNMSAADIARSALEVAGEICVFTNDQITLEVLE 181
>gi|145219767|ref|YP_001130476.1| ATP-dependent protease peptidase subunit [Prosthecochloris
vibrioformis DSM 265]
gi|189036231|sp|A4SER5|HSLV_PROVI RecName: Full=ATP-dependent protease subunit HslV
gi|145205931|gb|ABP36974.1| 20S proteasome, A and B subunits [Chlorobium phaeovibrioides DSM
265]
Length = 182
Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 131/173 (75%), Gaps = 1/173 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT++ V +DG + DGQ++LG TV+K + RK+R L +G ++AGFAG++ADA TL
Sbjct: 8 RIRSTTVIGVLRDGKAALGSDGQMTLGNTVVKHSTRKIRSLYQGRLLAGFAGATADALTL 67
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E+KLE Y +L R++VELA+DWR DKYLR LEAM+ I L+I+G GDV+EPE
Sbjct: 68 LDRFEEKLEAYNGKLERAAVELARDWRTDKYLRRLEAMLAIVSSEKALIISGTGDVIEPE 127
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLE 183
+G++AIGSG YAL+AARALM T A EI ++++ AADIC+YTN +IV+E
Sbjct: 128 DGIVAIGSGSMYALAAARALMKHTGLHAGEIVQESLRTAADICIYTNDHIVVE 180
>gi|332528829|ref|ZP_08404803.1| ATP-dependent protease subunit HslV [Hylemonella gracilis ATCC
19624]
gi|332041688|gb|EGI78040.1| ATP-dependent protease subunit HslV [Hylemonella gracilis ATCC
19624]
Length = 168
Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 125/164 (76%), Gaps = 1/164 (0%)
Query: 27 VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
V I GDGQV+LG V+K ARKVR+L G ++AGFAG++ADAFTL ER E KL+++ L
Sbjct: 3 VAIGGDGQVTLGHIVVKGTARKVRKLHHGKVLAGFAGATADAFTLFERFEAKLDKHQGHL 62
Query: 87 LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
R+++EL +DWR D+ LR LEAM+ +AD +L+I+G GDVLEPE+GV+AIGSGG+YA S
Sbjct: 63 QRAAIELTRDWRTDRVLRRLEAMLAVADLESSLIISGNGDVLEPEHGVVAIGSGGAYAQS 122
Query: 147 AARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AA AL+ TQ A+EI ++++ IA +IC+YTN N +E L+ G+
Sbjct: 123 AAIALLKHTQLDAKEIVKQSLEIAGEICIYTNMNHTIEVLEAGE 166
>gi|86159116|ref|YP_465901.1| ATP-dependent protease peptidase subunit [Anaeromyxobacter
dehalogenans 2CP-C]
gi|123498717|sp|Q2ILD4|HSLV_ANADE RecName: Full=ATP-dependent protease subunit HslV
gi|85775627|gb|ABC82464.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Anaeromyxobacter dehalogenans 2CP-C]
Length = 181
Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 139/178 (78%), Gaps = 5/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MH TT+L VR++G VVIAGDGQV+L +TVMKA ARKVRRLG+G ++AGFAG++ADAF L
Sbjct: 4 MHGTTVLCVRREGRVVIAGDGQVTLDKTVMKATARKVRRLGEGQVVAGFAGATADAFQLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
E EKKL+++ L R++VELAK WR D+ LR LEA++++AD+ LV++G GDV+EP+
Sbjct: 64 ELFEKKLKEHARSLPRAAVELAKQWRTDRMLRRLEALLVVADREHVLVLSGAGDVIEPDP 123
Query: 132 --NG-VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
NG +AIGSGG YAL+AARAL++ + A +A +AM +AA+IC+YTN N+ +E L
Sbjct: 124 VANGAAVAIGSGGPYALAAARALLAHSSLDARRVAEEAMKLAAEICIYTNGNLTIEEL 181
>gi|186474841|ref|YP_001856311.1| ATP-dependent protease peptidase subunit [Burkholderia phymatum
STM815]
gi|238065843|sp|B2JJX8|HSLV_BURP8 RecName: Full=ATP-dependent protease subunit HslV
gi|184191300|gb|ACC69265.1| 20S proteasome A and B subunits [Burkholderia phymatum STM815]
Length = 178
Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGAKKVRRIYNNKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AA+AL +T S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALADNTDLSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|257869687|ref|ZP_05649340.1| 20S proteasome protein [Enterococcus gallinarum EG2]
gi|257803851|gb|EEV32673.1| 20S proteasome protein [Enterococcus gallinarum EG2]
Length = 180
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 130/176 (73%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
H+TTI V KDG +AGDGQV++G Q VMK ARKVRR+ G ++ GFAGS ADAFTL
Sbjct: 5 FHSTTICAVEKDGKFAMAGDGQVTMGEQVVMKGTARKVRRIYNGEVVVGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL +Y L R++VELA++WR + ++ LEAM+++ ++ L+++G G+V+ P+
Sbjct: 65 EEKFEGKLNEYNGNLQRAAVELAQEWRTQQSMQKLEAMLIVMNQEEMLLVSGTGEVISPD 124
Query: 132 NGVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG+YAL+AARA+ SA+EIA A++IAADICV+TNHNI++E
Sbjct: 125 EGILAIGSGGNYALAAARAMKRYGGDLSAKEIAEGALNIAADICVFTNHNIIVEEF 180
>gi|329900880|ref|ZP_08272629.1| ATP-dependent protease HslV [Oxalobacteraceae bacterium IMCC9480]
gi|327549353|gb|EGF33924.1| ATP-dependent protease HslV [Oxalobacteraceae bacterium IMCC9480]
Length = 178
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ +V + GDGQV+LG VMK ARKVR+L G ++AGFAG +ADAFTL
Sbjct: 3 QFHGTTILSVRRGKLVALGGDGQVTLGNIVMKGTARKVRKLYNGKVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+E E KLE+Y L+R+SVELAK+WR D+ LR LEAM+L+AD TLVITG GDVLEPE
Sbjct: 63 IELFEAKLEKYQGNLMRASVELAKNWRTDRMLRRLEAMLLVADHETTLVITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G+ AIGSGG++A SAA+AL +T+ S +I RK+++IA ++C+YTN + +ETL+
Sbjct: 123 DGIGAIGSGGAFAQSAAKALQENTELSPADIVRKSLTIAGELCIYTNLSHTIETLE 178
>gi|78186792|ref|YP_374835.1| ATP-dependent protease peptidase subunit [Chlorobium luteolum DSM
273]
gi|123583124|sp|Q3B4D9|HSLV_PELLD RecName: Full=ATP-dependent protease subunit HslV
gi|78166694|gb|ABB23792.1| heat shock protein HslV [Chlorobium luteolum DSM 273]
Length = 182
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 132/172 (76%), Gaps = 1/172 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ +TT++ V +DG + DGQ++LG TV+K + RK+R L +G ++AGFAG++ADA TLL
Sbjct: 9 IRSTTVIGVLRDGKAALGSDGQMTLGNTVVKHSTRKIRSLYQGRLLAGFAGATADAITLL 68
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+R E+KLE Y +L R++VELA+DWR DKYLR LEAM+ I L+I+G GDV+EPE+
Sbjct: 69 DRFEEKLEAYNGKLERAAVELARDWRTDKYLRRLEAMLAIVSSERALIISGTGDVIEPED 128
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLE 183
G++AIGSG YAL+AAR+LM T SA +I R+++ AA+IC+YTN++IV+E
Sbjct: 129 GIVAIGSGSMYALAAARSLMKHTGLSARDIVRESLETAAEICIYTNNHIVVE 180
>gi|62263520|gb|AAX78168.1| unknown protein [synthetic construct]
Length = 218
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/186 (52%), Positives = 138/186 (74%), Gaps = 6/186 (3%)
Query: 6 DKHYAVKMHA---TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
DKH ++M A TTIL VRK VVI GDGQ +LG T+ K N KVR+L G ++ GFA
Sbjct: 21 DKHM-LEMEAIKGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFA 79
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
GS+ADAFTL E+ E+KLE Y L R++VE+ ++WR+D+ L LEAMI++A++ ++L+I+
Sbjct: 80 GSTADAFTLFEKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVANEKLSLLIS 139
Query: 123 GMGDVLEPE-NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNI 180
G GDV+ + N +++IGSG +YA SAA AL+ +T SAEEI RK+++IAAD C+YTNHN
Sbjct: 140 GAGDVMAADKNDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNF 199
Query: 181 VLETLK 186
+E+L+
Sbjct: 200 TIESLE 205
>gi|29376201|ref|NP_815355.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
V583]
gi|255972715|ref|ZP_05423301.1| 20S proteasome [Enterococcus faecalis T1]
gi|255975767|ref|ZP_05426353.1| 20S proteasome [Enterococcus faecalis T2]
gi|256619142|ref|ZP_05475988.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
ATCC 4200]
gi|256762578|ref|ZP_05503158.1| 20S proteasome [Enterococcus faecalis T3]
gi|256853204|ref|ZP_05558574.1| heat shock protein HslV [Enterococcus faecalis T8]
gi|256959058|ref|ZP_05563229.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
DS5]
gi|256961849|ref|ZP_05566020.1| hypothetical protein EFGG_00927 [Enterococcus faecalis Merz96]
gi|256965046|ref|ZP_05569217.1| hypothetical protein EFHG_00342 [Enterococcus faecalis HIP11704]
gi|257079089|ref|ZP_05573450.1| hypothetical protein EFIG_00354 [Enterococcus faecalis JH1]
gi|257082472|ref|ZP_05576833.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
E1Sol]
gi|257085104|ref|ZP_05579465.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
Fly1]
gi|257086665|ref|ZP_05581026.1| hypothetical protein EFLG_00256 [Enterococcus faecalis D6]
gi|257089963|ref|ZP_05584324.1| 20S proteasome peptidase subunit [Enterococcus faecalis CH188]
gi|257416172|ref|ZP_05593166.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
AR01/DG]
gi|257422532|ref|ZP_05599522.1| heat shock protein hslV [Enterococcus faecalis X98]
gi|294781640|ref|ZP_06746976.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis PC1.1]
gi|300860692|ref|ZP_07106779.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TUSoD Ef11]
gi|47605678|sp|Q834K3|HSLV_ENTFA RecName: Full=ATP-dependent protease subunit HslV
gi|29343664|gb|AAO81425.1| heat shock protein HslV [Enterococcus faecalis V583]
gi|255963733|gb|EET96209.1| 20S proteasome [Enterococcus faecalis T1]
gi|255968639|gb|EET99261.1| 20S proteasome [Enterococcus faecalis T2]
gi|256598669|gb|EEU17845.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
ATCC 4200]
gi|256683829|gb|EEU23524.1| 20S proteasome [Enterococcus faecalis T3]
gi|256711663|gb|EEU26701.1| heat shock protein HslV [Enterococcus faecalis T8]
gi|256949554|gb|EEU66186.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
DS5]
gi|256952345|gb|EEU68977.1| hypothetical protein EFGG_00927 [Enterococcus faecalis Merz96]
gi|256955542|gb|EEU72174.1| hypothetical protein EFHG_00342 [Enterococcus faecalis HIP11704]
gi|256987119|gb|EEU74421.1| hypothetical protein EFIG_00354 [Enterococcus faecalis JH1]
gi|256990502|gb|EEU77804.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
E1Sol]
gi|256993134|gb|EEU80436.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
Fly1]
gi|256994695|gb|EEU81997.1| hypothetical protein EFLG_00256 [Enterococcus faecalis D6]
gi|256998775|gb|EEU85295.1| 20S proteasome peptidase subunit [Enterococcus faecalis CH188]
gi|257158000|gb|EEU87960.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
ARO1/DG]
gi|257164356|gb|EEU94316.1| heat shock protein hslV [Enterococcus faecalis X98]
gi|294451336|gb|EFG19802.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis PC1.1]
gi|295113044|emb|CBL31681.1| ATP dependent peptidase CodWX, CodW component. Threonine peptidase.
MEROPS family T01B [Enterococcus sp. 7L76]
gi|300849731|gb|EFK77481.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TUSoD Ef11]
gi|323480808|gb|ADX80247.1| ATP-dependent protease HslV [Enterococcus faecalis 62]
Length = 182
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 135/178 (75%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ ++ GFAGS ADAFT
Sbjct: 5 QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ +K L+++G G+V+ P
Sbjct: 65 LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 124
Query: 131 ENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG++ALSAARA+ + + A+EIA+ A++IAADICV+TNHNI++E L
Sbjct: 125 DDGILAIGSGGNFALSAARAMKNFGDKEMPAKEIAKNALNIAADICVFTNHNIIVEEL 182
>gi|69246762|ref|ZP_00604110.1| 20S proteasome, A and B subunits [Enterococcus faecium DO]
gi|257878025|ref|ZP_05657678.1| 20S proteasome protein [Enterococcus faecium 1,230,933]
gi|257881189|ref|ZP_05660842.1| 20S proteasome protein [Enterococcus faecium 1,231,502]
gi|257884852|ref|ZP_05664505.1| 20S proteasome protein [Enterococcus faecium 1,231,501]
gi|257889776|ref|ZP_05669429.1| 20S proteasome protein [Enterococcus faecium 1,231,410]
gi|257892287|ref|ZP_05671940.1| 20S proteasome protein [Enterococcus faecium 1,231,408]
gi|258616484|ref|ZP_05714254.1| ATP-dependent protease peptidase subunit [Enterococcus faecium DO]
gi|260559075|ref|ZP_05831261.1| 20S proteasome protein [Enterococcus faecium C68]
gi|261207609|ref|ZP_05922294.1| 20S proteasome protein [Enterococcus faecium TC 6]
gi|289565121|ref|ZP_06445574.1| ATP-dependent protease hslV [Enterococcus faecium D344SRF]
gi|293556769|ref|ZP_06675332.1| ATP-dependent protease HslV [Enterococcus faecium E1039]
gi|293563427|ref|ZP_06677876.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1162]
gi|293568160|ref|ZP_06679496.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1071]
gi|294614816|ref|ZP_06694711.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1636]
gi|294617495|ref|ZP_06697126.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1679]
gi|294622308|ref|ZP_06701351.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium U0317]
gi|314938037|ref|ZP_07845347.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133a04]
gi|314941977|ref|ZP_07848838.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133C]
gi|314948770|ref|ZP_07852142.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0082]
gi|314951788|ref|ZP_07854827.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133A]
gi|314991805|ref|ZP_07857263.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133B]
gi|314995846|ref|ZP_07860933.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133a01]
gi|68195116|gb|EAN09576.1| 20S proteasome, A and B subunits [Enterococcus faecium DO]
gi|257812253|gb|EEV41011.1| 20S proteasome protein [Enterococcus faecium 1,230,933]
gi|257816847|gb|EEV44175.1| 20S proteasome protein [Enterococcus faecium 1,231,502]
gi|257820690|gb|EEV47838.1| 20S proteasome protein [Enterococcus faecium 1,231,501]
gi|257826136|gb|EEV52762.1| 20S proteasome protein [Enterococcus faecium 1,231,410]
gi|257828666|gb|EEV55273.1| 20S proteasome protein [Enterococcus faecium 1,231,408]
gi|260074832|gb|EEW63148.1| 20S proteasome protein [Enterococcus faecium C68]
gi|260077992|gb|EEW65698.1| 20S proteasome protein [Enterococcus faecium TC 6]
gi|289163128|gb|EFD10975.1| ATP-dependent protease hslV [Enterococcus faecium D344SRF]
gi|291589150|gb|EFF20962.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1071]
gi|291592278|gb|EFF23892.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1636]
gi|291596235|gb|EFF27497.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1679]
gi|291598200|gb|EFF29298.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium U0317]
gi|291601101|gb|EFF31390.1| ATP-dependent protease HslV [Enterococcus faecium E1039]
gi|291604688|gb|EFF34173.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1162]
gi|313589950|gb|EFR68795.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133a01]
gi|313593616|gb|EFR72461.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133B]
gi|313596067|gb|EFR74912.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133A]
gi|313599229|gb|EFR78074.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133C]
gi|313642612|gb|EFS07192.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133a04]
gi|313644836|gb|EFS09416.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0082]
Length = 182
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 135/177 (76%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ G ++ GFAGS ADAFTL
Sbjct: 6 FHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNGEVVVGFAGSVADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL +Y L R++VELA++WR + ++ LEAM+++ + L+++G G+V+ P+
Sbjct: 66 EEKFEGKLNEYNGNLQRAAVELAQEWRTQQSMQKLEAMLIVMNDKEMLLVSGTGEVITPD 125
Query: 132 NGVMAIGSGGSYALSAARALMS-TQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG++AL+AARA+ + QN SA+EIA A++IAADIC++TNHNI++E L
Sbjct: 126 DGILAIGSGGNFALAAARAMKNYAQNDMSAKEIAENALNIAADICIFTNHNIIVEEL 182
>gi|189346636|ref|YP_001943165.1| ATP-dependent protease peptidase subunit [Chlorobium limicola DSM
245]
gi|238692148|sp|B3ECB1|HSLV_CHLL2 RecName: Full=ATP-dependent protease subunit HslV
gi|189340783|gb|ACD90186.1| 20S proteasome A and B subunits [Chlorobium limicola DSM 245]
Length = 182
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 130/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ +TT+L V +DG + DGQ++LG TV+K + RK+R L G II GFAG++ADA TLL
Sbjct: 9 IRSTTVLGVIRDGKAALGSDGQMTLGNTVLKHSTRKIRSLYHGRIITGFAGATADAVTLL 68
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+R E+KL+ Y +L R++VELA+DWR DKYLR LEAM+ + + L+I+G GDV+EPE+
Sbjct: 69 DRFEEKLDAYGGKLERAAVELARDWRTDKYLRRLEAMLAVVSQDKALIISGTGDVIEPED 128
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++AIGSG YAL+AAR+L+ T SA EI +++ IAADIC+YTN +IV+E L
Sbjct: 129 SIVAIGSGSMYALAAARSLLKHTPLSAREIVSESLKIAADICIYTNDHIVIEEL 182
>gi|227518832|ref|ZP_03948881.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
TX0104]
gi|227553449|ref|ZP_03983498.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
HH22]
gi|229545743|ref|ZP_04434468.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
TX1322]
gi|229549932|ref|ZP_04438657.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
ATCC 29200]
gi|293382914|ref|ZP_06628832.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis R712]
gi|293389597|ref|ZP_06634054.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis S613]
gi|307270939|ref|ZP_07552222.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX4248]
gi|307273144|ref|ZP_07554390.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0855]
gi|307274879|ref|ZP_07556042.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX2134]
gi|307277986|ref|ZP_07559070.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0860]
gi|307289186|ref|ZP_07569142.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0109]
gi|307291917|ref|ZP_07571786.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0411]
gi|312899494|ref|ZP_07758824.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0470]
gi|312903387|ref|ZP_07762567.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0635]
gi|312907616|ref|ZP_07766607.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis DAPTO 512]
gi|312910233|ref|ZP_07769080.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis DAPTO 516]
gi|312951577|ref|ZP_07770473.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0102]
gi|227073745|gb|EEI11708.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
TX0104]
gi|227177425|gb|EEI58397.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
HH22]
gi|229304945|gb|EEN70941.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
ATCC 29200]
gi|229309193|gb|EEN75180.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
TX1322]
gi|291079579|gb|EFE16943.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis R712]
gi|291081214|gb|EFE18177.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis S613]
gi|306496915|gb|EFM66463.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0411]
gi|306499895|gb|EFM69256.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0109]
gi|306505383|gb|EFM74569.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0860]
gi|306508327|gb|EFM77434.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX2134]
gi|306510129|gb|EFM79153.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0855]
gi|306512437|gb|EFM81086.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX4248]
gi|310626644|gb|EFQ09927.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis DAPTO 512]
gi|310630543|gb|EFQ13826.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0102]
gi|310633263|gb|EFQ16546.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0635]
gi|311289506|gb|EFQ68062.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis DAPTO 516]
gi|311293364|gb|EFQ71920.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0470]
gi|315029304|gb|EFT41236.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX4000]
gi|315034050|gb|EFT45982.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0017]
gi|315037058|gb|EFT48990.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0027]
gi|315145126|gb|EFT89142.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX2141]
gi|315147343|gb|EFT91359.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX4244]
gi|315150457|gb|EFT94473.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0012]
gi|315152401|gb|EFT96417.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0031]
gi|315155673|gb|EFT99689.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0043]
gi|315160540|gb|EFU04557.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0645]
gi|315164095|gb|EFU08112.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX1302]
gi|315168955|gb|EFU12972.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX1341]
gi|315169811|gb|EFU13828.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX1342]
gi|315575785|gb|EFU87976.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0309B]
gi|315577627|gb|EFU89818.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0630]
gi|315580437|gb|EFU92628.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0309A]
gi|327535212|gb|AEA94046.1| ATP-dependent protease HslVU [Enterococcus faecalis OG1RF]
gi|329571617|gb|EGG53298.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX1467]
Length = 194
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 135/178 (75%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ ++ GFAGS ADAFT
Sbjct: 17 QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 76
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ +K L+++G G+V+ P
Sbjct: 77 LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 136
Query: 131 ENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG++ALSAARA+ + + A+EIA+ A++IAADICV+TNHNI++E L
Sbjct: 137 DDGILAIGSGGNFALSAARAMKNFGDKEMPAKEIAKNALNIAADICVFTNHNIIVEEL 194
>gi|315172225|gb|EFU16242.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX1346]
Length = 194
Score = 192 bits (488), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 135/178 (75%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ ++ GFAGS ADAFT
Sbjct: 17 QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 76
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ +K L+++G G+V+ P
Sbjct: 77 LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 136
Query: 131 ENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG++ALSAARA+ + + A+EIA+ A++IAADICV+TNHNI++E L
Sbjct: 137 DDGILAIGSGGNFALSAARAMKNFGDKEMPAKEIAKNALNIAADICVFTNHNIIVEEL 194
>gi|312797559|ref|YP_004030481.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
[Burkholderia rhizoxinica HKI 454]
gi|312169334|emb|CBW76337.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV (EC
3.4.25.-) [Burkholderia rhizoxinica HKI 454]
Length = 178
Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNSVALGGDGQVTLGNIVMKGGAKKVRRIYGGKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD TLVITG GDVL+PE
Sbjct: 63 LDRFEGKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADAETTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ SA +I KA++IA D+C+YTNH+ V+ET++
Sbjct: 123 GGLCAIGSGGAYAQAAARALADNTELSARDIVEKALAIAGDMCIYTNHSRVIETIE 178
>gi|323705452|ref|ZP_08117027.1| 20S proteasome, A and B subunits [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323535354|gb|EGB25130.1| 20S proteasome, A and B subunits [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 176
Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 132/175 (75%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ VR+ V IAGDGQV+ G+ T++K A+K+RRL ++ GFAGS ADAFTL
Sbjct: 2 FKGTTIVAVRRGNKVSIAGDGQVTFGENTILKHGAKKIRRLYNDEVLVGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E+KLEQY L R++VELA++WR DK L+ LEA+++ ADK +TLVI+G G+V+EP+
Sbjct: 62 SEMFEEKLEQYSGNLKRAAVELAQEWRKDKILKKLEALLIAADKNVTLVISGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
N V+AIGSGG++A+SAA AL +T +EIARK++ IA+ ICVYTN +I +E+L
Sbjct: 122 NDVIAIGSGGNFAMSAALALRYNTDLPVDEIARKSLEIASQICVYTNDHITVESL 176
>gi|295698590|ref|YP_003603245.1| ATP-dependent protease HslV [Candidatus Riesia pediculicola USDA]
gi|291157475|gb|ADD79920.1| ATP-dependent protease HslV [Candidatus Riesia pediculicola USDA]
Length = 176
Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VVI GDGQ ++G T++K N +K+RRL +IAGFAG +ADAF L +
Sbjct: 2 TTIISVRRSGSVVIGGDGQATMGNTIIKGNVKKIRRLYHERVIAGFAGGTADAFALFDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKK+E L++++VEL K+WR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 EKKIEICQGHLVKAAVELTKEWRTDRMLRRLEAILAVADRTNSLIITGNGDVIQPESSLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG Y +AA+A++ +TQ SA +I KA+ IA++IC+YTNHN E +
Sbjct: 122 AIGSGGPYGKAAAKAMLENTQMSARDITEKALKIASEICIYTNHNFNFEEI 172
>gi|116328184|ref|YP_797904.1| ATP-dependent protease peptidase subunit [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116330908|ref|YP_800626.1| ATP-dependent protease peptidase subunit [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|47605711|sp|Q8GQU1|HSLV_LEPBO RecName: Full=ATP-dependent protease subunit HslV
gi|122281339|sp|Q04TA2|HSLV_LEPBJ RecName: Full=ATP-dependent protease subunit HslV
gi|122284025|sp|Q051M4|HSLV_LEPBL RecName: Full=ATP-dependent protease subunit HslV
gi|25814818|gb|AAN75635.1|AF270500_1 HlsV [Leptospira borgpetersenii]
gi|116120928|gb|ABJ78971.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116124597|gb|ABJ75868.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
Length = 180
Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TTIL VRK G V I GDGQVS+G TVMK A+K+RRL G I++GFAGS+ADAFTL
Sbjct: 5 KIRSTTILCVRKSGKVAIGGDGQVSMGNTVMKNTAKKIRRLYDGKILSGFAGSAADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E EKK++++ L RS+VELA++WR D+ LR LEA++++ADK + +I+G GDV+ P+
Sbjct: 65 FELFEKKVQEFGGSLSRSAVELAREWRTDRMLRKLEALLIVADKEESFLISGTGDVISPD 124
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV+AIGSGGSYAL+AA+AL T SA EI +M IAA+IC+YTN +I LE +
Sbjct: 125 EGVIAIGSGGSYALAAAKALYDHTDLSAREIVESSMKIAANICIYTNDHITLEEI 179
>gi|56707808|ref|YP_169704.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110670279|ref|YP_666836.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. tularensis FSC198]
gi|54113081|gb|AAV29174.1| NT02FT1012 [synthetic construct]
gi|56604300|emb|CAG45321.1| ATP-dependent protease, proteasome-related peptidase subunit
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110320612|emb|CAL08704.1| ATP-dependent protease, proteasome-related peptidase subunit
[Francisella tularensis subsp. tularensis FSC198]
gi|282158982|gb|ADA78373.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. tularensis NE061598]
Length = 183
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTIL VRK VVI GDGQ +LG T+ K N KVR+L G ++ GFAGS+ADAFTL
Sbjct: 4 IKGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
E+ E+KLE Y L R++VE+ ++WR+D+ L LEAMI++A++ ++L+I+G GDV+ +
Sbjct: 64 EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVANEKLSLLISGAGDVMAADK 123
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N +++IGSG +YA SAA AL+ +T SAEEI RK+++IAAD C+YTNHN +E+L+
Sbjct: 124 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 179
>gi|89093514|ref|ZP_01166462.1| ATP-dependent protease peptidase subunit [Oceanospirillum sp.
MED92]
gi|89082204|gb|EAR61428.1| ATP-dependent protease peptidase subunit [Oceanospirillum sp.
MED92]
Length = 176
Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VV+ GDGQVSLG TVMK ARKVRRL K + I GFAGS+ADA TLL+
Sbjct: 2 TTIVSVRRGDKVVVGGDGQVSLGNTVMKGTARKVRRLAKHDTITGFAGSTADAITLLDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ + + V LAK+WR D+ LR LEA++L+A+K T +I+G GD++EPE+GV+
Sbjct: 62 EAQLEKHQGNIFNAVVSLAKEWRGDRVLRKLEALMLVANKEKTYLISGSGDIIEPEDGVI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++AL+AARAL +T+ A++I K++ IAA ICV++N N+ +E L
Sbjct: 122 AIGSGGNFALAAARALTDNTELPAKDIVEKSLQIAAGICVFSNDNLTIEEL 172
>gi|257457893|ref|ZP_05623052.1| ATP-dependent protease HslVU, peptidase subunit [Treponema
vincentii ATCC 35580]
gi|257444606|gb|EEV19690.1| ATP-dependent protease HslVU, peptidase subunit [Treponema
vincentii ATCC 35580]
Length = 179
Score = 191 bits (486), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 139/175 (79%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TT++ V+++G V +AGDGQV++G+TVMK NARKVR++ G ++ GFAG++ADAFTL
Sbjct: 5 KVRSTTVIAVKRNGKVAMAGDGQVTMGETVMKGNARKVRKIYDGKVMTGFAGATADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LE+ E +L++Y + R++VELAK+WR DK L+NLEA++L+AD L+I+G GDV+EP+
Sbjct: 65 LEKFEGRLKEYSGDITRAAVELAKEWRTDKMLKNLEALLLVADAKTILLISGNGDVIEPQ 124
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+AIGSGG+YA +AA AL+ +T SA EIA K++SIA ICVYTN N+ +E +
Sbjct: 125 EEVLAIGSGGNYAYAAALALLRNTDLSAREIAEKSLSIAGQICVYTNENVHIEEI 179
>gi|195953683|ref|YP_002121973.1| ATP-dependent protease peptidase subunit [Hydrogenobaculum sp.
Y04AAS1]
gi|195933295|gb|ACG57995.1| 20S proteasome A and B subunits [Hydrogenobaculum sp. Y04AAS1]
Length = 181
Score = 191 bits (486), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 126/174 (72%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+HATT++ VRK+G I DGQV+LG ++K +A+K RRL KG ++ GFAG +AD L+
Sbjct: 8 LHATTVIAVRKNGQTAIGSDGQVTLGSQILKHSAKKTRRLHKGTVLVGFAGGAADGLALM 67
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++ L R+SVELAK+WR D+YLR LEA+++ DK +++G GDV+EP+
Sbjct: 68 ERLEGKLEEHRGNLARASVELAKEWRTDRYLRRLEAVLIACDKESMFLLSGNGDVIEPDE 127
Query: 133 GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++A GSGG +A SAA+AL T SAEEI + ++ IA+DICVYTN + +E L
Sbjct: 128 PILATGSGGDFARSAAKALYYHTDKSAEEIVKISLDIASDICVYTNKHFSIELL 181
>gi|254251130|ref|ZP_04944448.1| protease HslVU [Burkholderia dolosa AUO158]
gi|124893739|gb|EAY67619.1| protease HslVU [Burkholderia dolosa AUO158]
Length = 211
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/176 (55%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 36 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 95
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD TLVITG GDVL+PE
Sbjct: 96 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADANTTLVITGNGDVLDPE 155
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ S +I K++ IA D+C+YTNHN ++ET++
Sbjct: 156 GGICAIGSGGAYAQAAARALAENTELSPRQIVEKSLEIAGDMCIYTNHNRIIETIE 211
>gi|94309076|ref|YP_582286.1| ATP-dependent protease peptidase subunit [Cupriavidus metallidurans
CH34]
gi|166222992|sp|Q1LS59|HSLV_RALME RecName: Full=ATP-dependent protease subunit HslV
gi|93352928|gb|ABF07017.1| peptidase component of the HslUV protease [Cupriavidus
metallidurans CH34]
Length = 178
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ G ++ GFAGS+ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRRIYNGKVLVGFAGSTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE+Y L R++V+LAKDWR D+ LR LEAM++ ADK TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKYQGNLTRAAVDLAKDWRSDRALRRLEAMLITADKDTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ AIGSGG+YA SAA+AL+ +T+ +++ KA++IA ++C+YTN N V+ETL
Sbjct: 123 GGIAAIGSGGAYAQSAAKALVENTELPPKDVVEKALTIAGELCIYTNTNFVIETL 177
>gi|308068647|ref|YP_003870252.1| ATP-dependent protease hslV [Paenibacillus polymyxa E681]
gi|305857926|gb|ADM69714.1| ATP-dependent protease hslV [Paenibacillus polymyxa E681]
Length = 180
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 133/176 (75%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI VR +G IAGDGQV+ G +V MK A+KVRRL +G ++AGFAGS ADA TL
Sbjct: 5 FHATTICAVRHNGKGAIAGDGQVTFGNSVVMKQTAKKVRRLYRGQVVAGFAGSVADAITL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE++ L R++VELAKDWR D+ LR LEA++++ D + L+I+G G+++EP+
Sbjct: 65 FEKFENKLEEHHGNLQRAAVELAKDWRQDRILRKLEALMIVMDSSGMLLISGGGEIIEPD 124
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V+AIGSGG++AL+AARA + A+++AR+A+ +A++ICVYTN+ I++E L
Sbjct: 125 DDVLAIGSGGNFALAAARAFKRHGSGMEAKDMAREALEVASEICVYTNNQIIVEEL 180
>gi|328954141|ref|YP_004371475.1| ATP-dependent protease hslV [Desulfobacca acetoxidans DSM 11109]
gi|328454465|gb|AEB10294.1| ATP-dependent protease hslV [Desulfobacca acetoxidans DSM 11109]
Length = 183
Score = 191 bits (485), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 131/174 (75%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL VR+DG V +AGDGQV+L TVMK ARKVR++ G II GFAG++ADA +LL
Sbjct: 10 FRGTTILAVRRDGKVAVAGDGQVTLNNTVMKHRARKVRKIYNGKIIVGFAGATADALSLL 69
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KLE++ L R+ VELAKDWR DK LR LEA++L+ D+ +++G GDV+EP++
Sbjct: 70 ERFESKLEKHQGNLTRAVVELAKDWRTDKILRRLEALLLVVDRDNFFLLSGSGDVIEPDD 129
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VMAIGSGG+YA +AA+AL+ T SAEEI R+AM IAA +C++TN+ + LE L
Sbjct: 130 EVMAIGSGGAYAQAAAQALVQHTTMSAEEICREAMQIAAGLCIFTNNQLTLEEL 183
>gi|308806509|ref|XP_003080566.1| COG5405: ATP-dependent protease HslVU (ISS) [Ostreococcus tauri]
gi|116059026|emb|CAL54733.1| COG5405: ATP-dependent protease HslVU (ISS) [Ostreococcus tauri]
Length = 391
Score = 191 bits (485), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 136/179 (75%), Gaps = 3/179 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ ATT+L +RK+GV I DGQV++G ++K N +KVR + G ++ GFAG++ADAFTL
Sbjct: 38 VRATTVLCIRKNGVTTIMADGQVTMGSEIVKPNVKKVRVIEPG-VVGGFAGATADAFTLF 96
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+RLE++LEQ+P QL R+ VELAK WR DK+LR LEA +++ADK + ITG GDVLEP +
Sbjct: 97 DRLEQQLEQHPGQLTRACVELAKQWRTDKFLRKLEATMIVADKESSFQITGSGDVLEPHD 156
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
GV+ IGSGGSYAL+AARAL+ S+ +IA+KAM+IAAD CVYTNHN + + GD+
Sbjct: 157 GVIGIGSGGSYALAAARALVDVPGMSSFDIAKKAMTIAADTCVYTNHNFTWQIIG-GDD 214
>gi|20807895|ref|NP_623066.1| ATP-dependent protease peptidase subunit [Thermoanaerobacter
tengcongensis MB4]
gi|24211781|sp|Q8R9Y2|HSLV_THETN RecName: Full=ATP-dependent protease subunit HslV
gi|20516461|gb|AAM24670.1| Proteasome protease subunit [Thermoanaerobacter tengcongensis MB4]
Length = 176
Score = 191 bits (485), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 130/175 (74%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ VR+ V +AGDGQV+ G T++K A+K+RRL G +I GFAGS ADA TL
Sbjct: 2 FRGTTIVAVRRGDRVSVAGDGQVTFGDSTILKHGAKKIRRLYNGEVIVGFAGSVADAMTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E+KLEQY L R++VELA++WR DK LR LEA+++ ADK TL+I+G G+V+EP+
Sbjct: 62 SQKFEEKLEQYGGNLKRAAVELAQEWRKDKILRKLEALLIAADKKDTLLISGTGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ IGSGG+YA++AA AL +T EEIARKA+ IA+ ICVYTN+NI +ETL
Sbjct: 122 EDVIGIGSGGNYAMAAALALRYNTDLDTEEIARKALEIASKICVYTNNNITVETL 176
>gi|189500377|ref|YP_001959847.1| ATP-dependent protease peptidase subunit [Chlorobium
phaeobacteroides BS1]
gi|238692220|sp|B3EJG6|HSLV_CHLPB RecName: Full=ATP-dependent protease subunit HslV
gi|189495818|gb|ACE04366.1| 20S proteasome A and B subunits [Chlorobium phaeobacteroides BS1]
Length = 182
Score = 191 bits (485), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 134/179 (74%), Gaps = 1/179 (0%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
+++ ++ ATT+L V ++G + DGQ++LG TV+K + RK+RRL + I+ GFAG++
Sbjct: 2 ERYGKPELRATTVLGVIRNGKAALGSDGQMTLGNTVIKHSTRKIRRLRQAQIVTGFAGAT 61
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADA TLL+R E+KL+ Y L R++VELA+DWR DKYLR LEAM+ + L+I+G G
Sbjct: 62 ADAVTLLDRFEEKLQTYGGLLERAAVELARDWRTDKYLRRLEAMLAVVSPEKALIISGTG 121
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLE 183
DV+EPE+G++AIGSG +AL+AAR+LM T +A +I R+++ IAADIC+YTN +IVLE
Sbjct: 122 DVIEPEDGIVAIGSGSMFALAAARSLMKHTDLNAADIVRESLLIAADICIYTNDHIVLE 180
>gi|293393522|ref|ZP_06637832.1| ATP-dependent protease HslVU [Serratia odorifera DSM 4582]
gi|291423857|gb|EFE97076.1| ATP-dependent protease HslVU [Serratia odorifera DSM 4582]
Length = 164
Score = 191 bits (485), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 121/160 (75%), Gaps = 1/160 (0%)
Query: 27 VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
+VI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L
Sbjct: 1 MVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHL 60
Query: 87 LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSGG YA S
Sbjct: 61 VKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQS 120
Query: 147 AARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AARAL+ +T A +I K++ IA DIC+YTNH + +E L
Sbjct: 121 AARALLENTDLGARDIVEKSLGIAGDICIYTNHFLTIEEL 160
>gi|116515290|ref|YP_802919.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
Cc (Cinara cedri)]
gi|122285314|sp|Q056X3|HSLV_BUCCC RecName: Full=ATP-dependent protease subunit HslV
gi|116257144|gb|ABJ90826.1| peptidase component of ATP-dependent protease [Buchnera aphidicola
str. Cc (Cinara cedri)]
Length = 178
Score = 191 bits (485), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 129/174 (74%), Gaps = 3/174 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR G VVI GDGQ + G TVMK+N +KVR + K +IAGFAG +ADAFTL E
Sbjct: 2 TTILSVRVQGKVVIGGDGQATFGHTVMKSNVKKVRSIYKNQVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE+Y QL RS++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PEN ++
Sbjct: 62 EKKLEKYQGQLQRSAIELAKDWRTDRLLRKLEALLAVADKKNSLIITGTGDVIQPENDII 121
Query: 136 AIGSGGSYALSAARA---LMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA +AA A + +T A I +K++ IA++IC+YTN + ++ +K
Sbjct: 122 AIGSGGPYAQAAAYAYALVYNTNLKASNIVKKSLQIASNICIYTNQSFTIKEIK 175
>gi|315027187|gb|EFT39119.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX2137]
Length = 194
Score = 191 bits (485), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 134/178 (75%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ ++ GFAGS ADAFT
Sbjct: 17 QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 76
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ +K L+++G G+V+ P
Sbjct: 77 LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 136
Query: 131 ENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G +AIGSGG++ALSAARA+ + + A+EIA+ A++IAADICV+TNHNI++E L
Sbjct: 137 DDGFLAIGSGGNFALSAARAMKNFGDKEMPAKEIAKNALNIAADICVFTNHNIIVEEL 194
>gi|310641538|ref|YP_003946296.1| ATP-dependent protease subunit hslv [Paenibacillus polymyxa SC2]
gi|309246488|gb|ADO56055.1| ATP-dependent protease subunit HslV [Paenibacillus polymyxa SC2]
Length = 180
Score = 191 bits (485), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 132/176 (75%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI VR +G IAGDGQV+ G +V MK A+KVRRL +G ++AGFAGS ADA TL
Sbjct: 5 FHATTICAVRHNGKGAIAGDGQVTFGNSVVMKQTAKKVRRLYRGQVVAGFAGSVADAITL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE++ L R++VELAKDWR D+ LR LEA++++ D + L+I+G G+++EP+
Sbjct: 65 FEKFENKLEEHHGNLQRAAVELAKDWRQDRVLRKLEALMIVMDSSGMLLISGGGEIIEPD 124
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V+AIGSGG++AL+AARA + A+++AR+A+ +A++ICVYTN I++E L
Sbjct: 125 DDVLAIGSGGNFALAAARAFKRHGSGMEAKDMAREALEVASEICVYTNSQIIVEEL 180
>gi|289578440|ref|YP_003477067.1| 20S proteasome A and subunit betas [Thermoanaerobacter italicus
Ab9]
gi|297544716|ref|YP_003677018.1| 20S proteasome A and B subunits [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|289528153|gb|ADD02505.1| 20S proteasome A and B subunits [Thermoanaerobacter italicus Ab9]
gi|296842491|gb|ADH61007.1| 20S proteasome A and B subunits [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 176
Score = 191 bits (484), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 130/175 (74%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ VRK V +AGDGQ++LG+ T++K A+K+RRL G +I GFAGS ADA TL
Sbjct: 2 FKGTTIIAVRKGNKVSVAGDGQITLGENTILKHGAKKIRRLYNGEVIVGFAGSVADALTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E+KLEQY L R++VELA++WR DK LR LEA+++ DK TL+I+G G+V+EP+
Sbjct: 62 SQKFEEKLEQYGGNLKRAAVELAQEWRKDKILRKLEALLIAVDKKNTLLISGTGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ IGSGG+YA++AA AL N E+IA+KA+ IA+ ICVYTN+NI +ETL
Sbjct: 122 EDVIGIGSGGNYAMAAALALRYNTNLDTEDIAKKALEIASKICVYTNNNITVETL 176
>gi|114330627|ref|YP_746849.1| ATP-dependent protease peptidase subunit [Nitrosomonas eutropha
C91]
gi|122312891|sp|Q0AD36|HSLV_NITEC RecName: Full=ATP-dependent protease subunit HslV
gi|114307641|gb|ABI58884.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Nitrosomonas eutropha C91]
Length = 173
Score = 191 bits (484), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 130/172 (75%), Gaps = 3/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ V + GDGQV+LG V KA+ARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGRQVALGGDGQVTLGAVVAKASARKVRRLYHDKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE++ LLRS+VELAKDWR D+ LR LEAM+++AD TL+ITG GDV+EPE G+
Sbjct: 62 EAKLEKHQGHLLRSAVELAKDWRTDRILRRLEAMLVVADHEATLIITGAGDVIEPEQGLA 121
Query: 136 AIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AARAL+ N AE +A KA++IA DIC+YTN V+E L
Sbjct: 122 AIGSGGAYAQAAARALLENTNLGPAETVA-KALTIAGDICIYTNQVHVIEQL 172
>gi|113866230|ref|YP_724719.1| ATP-dependent protease peptidase subunit [Ralstonia eutropha H16]
gi|123134531|sp|Q0KF70|HSLV_RALEH RecName: Full=ATP-dependent protease subunit HslV
gi|113525006|emb|CAJ91351.1| ATP-dependent protease HslVU, peptidase subunit [Ralstonia eutropha
H16]
Length = 178
Score = 191 bits (484), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ G ++ GFAGS+ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRRIYNGKVLVGFAGSTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE+Y L R++V+LAKDWR D+ LR LEAM++ AD+ TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKYQGNLTRAAVDLAKDWRSDRALRRLEAMLITADRDTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAA+AL +T+ + +++ KA++IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALAENTEMAPKDVVEKALTIAGELCIYTNTNFVIETLE 178
>gi|301632118|ref|XP_002945138.1| PREDICTED: ATP-dependent hsl protease ATP-binding subunit hslU-like
[Xenopus (Silurana) tropicalis]
Length = 490
Score = 191 bits (484), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 128/170 (75%), Gaps = 6/170 (3%)
Query: 12 KMHATTILTVRK---DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+ H TTIL+VR+ DG V I GDGQV+LG V+K ARKVR+L G ++AGFAG++A
Sbjct: 3 QFHGTTILSVRRLRADGSTDVAIGGDGQVTLGNIVVKGTARKVRKLYHGKVLAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ER E KLE++ L R+++EL KDWR D+ LR LEAM+ +AD +L+ITG GD
Sbjct: 63 DAFTLFERFEAKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADHCASLIITGNGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVY 175
VLEPE G++AIGSGG+YA SAA+AL++ T+ AEE+ RK+++IA ++ +
Sbjct: 123 VLEPEQGIVAIGSGGAYAHSAAKALLANTELGAEEVVRKSLAIAGELAGF 172
>gi|30749448|pdb|1M4Y|A Chain A, Crystal Structure Of Hslv From Thermotoga Maritima
gi|30749449|pdb|1M4Y|B Chain B, Crystal Structure Of Hslv From Thermotoga Maritima
gi|30749450|pdb|1M4Y|C Chain C, Crystal Structure Of Hslv From Thermotoga Maritima
Length = 171
Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 131/169 (77%), Gaps = 1/169 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL VR++G V+ GDGQV+ G TV+K NARKVR+LG+G ++AGFAGS ADA TL +R
Sbjct: 1 TTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMTLFDRF 60
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL ++ L +++VELAKDWR D+ LR LEA++L+ADK +I+G G+V++P++
Sbjct: 61 EAKLREWGGNLTKAAVELAKDWRTDRVLRRLEALLLVADKENIFIISGNGEVIQPDDDAA 120
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLE 183
AIGSGG YAL+AA+AL+ +T SA EI KAM+IA +IC+YTN NIV+E
Sbjct: 121 AIGSGGPYALAAAKALLRNTDLSAREIVEKAMTIAGEICIYTNQNIVIE 169
>gi|260220004|emb|CBA27108.1| ATP-dependent protease hslV [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 181
Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 134/179 (74%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRKDGV----VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTI++VR+ V I GDGQV+LG V+K ARKVR+L G ++AGFAG++AD
Sbjct: 3 QFHGTTIISVRRQTPTGMQVAIGGDGQVTLGNIVIKGTARKVRKLYHGKVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ L+R+++EL KDWR D+ LR LEAM+ +ADK +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGHLVRAAIELTKDWRTDRVLRKLEAMLAVADKDASLIITGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPENG++ IGSGG+YA +AA AL++ + SA +I ++++ IA ++C+YTN N +ETL
Sbjct: 123 LEPENGIVTIGSGGAYAQAAAVALLNHSDLSAADIVKRSLEIAGELCIYTNMNHTIETL 181
>gi|77747654|ref|NP_778923.2| ATP-dependent protease peptidase subunit [Xylella fastidiosa
Temecula1]
gi|182681292|ref|YP_001829452.1| ATP-dependent protease peptidase subunit [Xylella fastidiosa M23]
gi|226704550|sp|B2IA19|HSLV_XYLF2 RecName: Full=ATP-dependent protease subunit HslV
gi|182631402|gb|ACB92178.1| 20S proteasome A and B subunits [Xylella fastidiosa M23]
Length = 183
Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 141/175 (80%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
HATTI+ VR+ V IAGDGQV+LG TVMK+NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 FHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE++ QL R++VELAKDWR ++ L LEA++++ADK +LVI+G GDV+EPE
Sbjct: 70 FELFEAKLEKH-GQLSRAAVELAKDWRTERRLGKLEALLVVADKETSLVISGTGDVIEPE 128
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSYALSAARALM+ T A IA +A+ IA +IC+YTN N+V++ L
Sbjct: 129 DGIVAIGSGGSYALSAARALMAHTALDARTIATEAIGIAGNICIYTNRNVVVDEL 183
>gi|73539873|ref|YP_294393.1| ATP-dependent protease peptidase subunit [Ralstonia eutropha
JMP134]
gi|123626065|sp|Q476Y4|HSLV_RALEJ RecName: Full=ATP-dependent protease subunit HslV
gi|72117286|gb|AAZ59549.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Ralstonia eutropha JMP134]
Length = 178
Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ G ++ GFAGS+ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRRIYNGKVLVGFAGSTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE+Y L R++V+LAKDWR D+ LR LEAM++ AD+ TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKYQGNLTRAAVDLAKDWRSDRALRRLEAMLITADRETTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAA+AL+ +T+ + ++ KA++IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALVENTELAPRDVVEKALTIAGELCIYTNTNFVIETLE 178
>gi|77747549|ref|NP_298773.2| ATP-dependent protease peptidase subunit [Xylella fastidiosa 9a5c]
Length = 183
Score = 190 bits (483), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 141/175 (80%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
HATTI+ VR+ V IAGDGQV+LG TVMK+NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 FHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE++ QL R++VELAKDWR ++ L LEA++++ADK +LVI+G GDV+EPE
Sbjct: 70 FELFEAKLEKH-GQLSRAAVELAKDWRTERRLGKLEALLVVADKETSLVISGTGDVIEPE 128
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSYALSAARALM+ T A IA +A+ IA +IC+YTN N+V++ L
Sbjct: 129 DGIVAIGSGGSYALSAARALMAHTALDARTIATEAIGIAGNICIYTNRNVVVDEL 183
>gi|54037331|sp|P65800|HSLV_XYLFT RecName: Full=ATP-dependent protease subunit HslV
gi|54041542|sp|P65799|HSLV_XYLFA RecName: Full=ATP-dependent protease subunit HslV
gi|9106511|gb|AAF84293.1|AE003978_1 heat shock protein [Xylella fastidiosa 9a5c]
gi|28056693|gb|AAO28572.1| heat shock protein [Xylella fastidiosa Temecula1]
gi|307579743|gb|ADN63712.1| ATP-dependent protease peptidase subunit [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 178
Score = 190 bits (483), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 141/175 (80%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
HATTI+ VR+ V IAGDGQV+LG TVMK+NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 5 FHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFAGAAADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE++ QL R++VELAKDWR ++ L LEA++++ADK +LVI+G GDV+EPE
Sbjct: 65 FELFEAKLEKH-GQLSRAAVELAKDWRTERRLGKLEALLVVADKETSLVISGTGDVIEPE 123
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSYALSAARALM+ T A IA +A+ IA +IC+YTN N+V++ L
Sbjct: 124 DGIVAIGSGGSYALSAARALMAHTALDARTIATEAIGIAGNICIYTNRNVVVDEL 178
>gi|71897646|ref|ZP_00679891.1| 20S proteasome, A and B subunits [Xylella fastidiosa Ann-1]
gi|71732549|gb|EAO34602.1| 20S proteasome, A and B subunits [Xylella fastidiosa Ann-1]
Length = 183
Score = 190 bits (482), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 141/175 (80%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
HATTI+ VR+ V IAGDGQV+LG TVMK+NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 FHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE++ QL R++VELAKDWR ++ L LEA++++ADK +LVI+G GDV+EPE
Sbjct: 70 FELFEGKLEKH-GQLSRAAVELAKDWRTERRLGKLEALLVVADKETSLVISGTGDVIEPE 128
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSYALSAARALM+ T A IA +A+ IA +IC+YTN N+V++ L
Sbjct: 129 DGIVAIGSGGSYALSAARALMAHTALDARTIATEAIGIAGNICIYTNRNVVVDEL 183
>gi|488725|emb|CAA83919.1| heat shock protein [Bacillus subtilis]
Length = 177
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 127/176 (72%), Gaps = 4/176 (2%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
ATTI V+ G ++GDGQV+ GQ V MK ARKVR+L G ++AGFAGS AD FTL E
Sbjct: 2 ATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADRFTLFE 61
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
+ E KL++Y L R++VELAK+WR DK LR LEAM+++ ++ L+++G G+V+EP++G
Sbjct: 62 KFEAKLKEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPDDG 121
Query: 134 VMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETLK 186
++AIGSGG+YAL+A RAL SA EIAR A+ A +ICVYTN I+LE L+
Sbjct: 122 ILAIGSGGNYALAAGRALKKHAGESMSASEIARAALETAGEICVYTNDQIILEELE 177
>gi|189501499|ref|YP_001957216.1| ATP-dependent protease peptidase subunit [Candidatus Amoebophilus
asiaticus 5a2]
gi|238692319|sp|B3EU68|HSLV_AMOA5 RecName: Full=ATP-dependent protease subunit HslV
gi|189496940|gb|ACE05487.1| 20S proteasome A and B subunits [Candidatus Amoebophilus asiaticus
5a2]
Length = 179
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 131/177 (74%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+K+ +TT++ V + V I DGQ ++G TV+K N K+R+L G ++ GFAGS+ADAFT
Sbjct: 2 LKIKSTTVIAVMHNNEVAIGADGQATMGSTVVKGNVNKIRKLLDGKVLTGFAGSTADAFT 61
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LL+R ++KL++Y + RS++ELAKDWR D+YLR LEAM++ +K L+I+G GDV+EP
Sbjct: 62 LLDRFDEKLQRYFGHMKRSAIELAKDWRTDRYLRRLEAMLIAVNKEELLLISGTGDVIEP 121
Query: 131 ENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+NG++ IGSG YA SAA AL + +AEEI R++++IAADIC+YTN N+ +E +
Sbjct: 122 DNGIVTIGSGSLYAESAAIALKKHAPHLTAEEIVRESLTIAADICIYTNDNLTIEKI 178
>gi|87309984|ref|ZP_01092117.1| ATP-dependent protease peptidase subunit [Blastopirellula marina
DSM 3645]
gi|87287230|gb|EAQ79131.1| ATP-dependent protease peptidase subunit [Blastopirellula marina
DSM 3645]
Length = 180
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 134/177 (75%), Gaps = 1/177 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+K+ +TTILTVR +G V I GDGQV++ +VMK++A K+R L G +I GFAGS+ADAF+
Sbjct: 1 MKIRSTTILTVRHNGRVAIGGDGQVTMNSSVMKSDAHKIRPLLGGKVICGFAGSTADAFS 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LLER E KL+ YPN + +++ ELAK+WR D+ +R LEA++ + + T +I+G GDV+ P
Sbjct: 61 LLERFEGKLKDYPNNVPKAATELAKEWRTDRAMRRLEALMTVINGEHTFLISGTGDVIAP 120
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
+GV+ IGSGG YA++AARAL++ SA+EI + A+ IAA I +YTN NI++E+++
Sbjct: 121 TDGVLGIGSGGDYAVAAARALVNHSVLSADEIVKAALQIAAGIDIYTNDNIMVESME 177
>gi|146296274|ref|YP_001180045.1| ATP-dependent protease peptidase subunit [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|189028423|sp|A4XIW9|HSLV_CALS8 RecName: Full=ATP-dependent protease subunit HslV
gi|145409850|gb|ABP66854.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 176
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 127/174 (72%), Gaps = 3/174 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ Q +MK NA+KVR++ G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGEKVAIAGDGQVTFSQNMIMKQNAKKVRKVYNGKVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++A+ V++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKILRRLEALMIVANSEHLFVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
+ + AIGSGG YAL+AARAL+ N EIA+KA+ IAA IC+YTN+NI VLE
Sbjct: 122 DNIAAIGSGGPYALAAARALVQNTNLEPAEIAKKALEIAASICIYTNNNITVLE 175
>gi|116747517|ref|YP_844204.1| ATP-dependent protease peptidase subunit [Syntrophobacter
fumaroxidans MPOB]
gi|189036246|sp|A0LEB7|HSLV_SYNFM RecName: Full=ATP-dependent protease subunit HslV
gi|116696581|gb|ABK15769.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
family T01B [Syntrophobacter fumaroxidans MPOB]
Length = 179
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT+L ++KDG VV+AGDGQV++G TV+K A+KVR++ I+ GF+GS+ADAFTL
Sbjct: 6 VHGTTVLAIKKDGKVVMAGDGQVTMGDTVVKHQAKKVRKMYHDRILTGFSGSTADAFTLF 65
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLEQY L R++VELAKDWRMD+ LR LEA+++ AD+ +++G GDV+EP++
Sbjct: 66 ERLEGKLEQYNGNLKRAAVELAKDWRMDRALRRLEALLVAADRNDCFILSGTGDVIEPDD 125
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ A+GSG YAL+AARAL+ T S EIA +AM+IAA IC+YTN E L
Sbjct: 126 GLAAVGSGAPYALAAARALIRHTGMSIREIAEEAMNIAASICIYTNREFTFEEL 179
>gi|325290381|ref|YP_004266562.1| ATP dependent peptidase CodWX, CodW component [Syntrophobotulus
glycolicus DSM 8271]
gi|324965782|gb|ADY56561.1| ATP dependent peptidase CodWX, CodW component [Syntrophobotulus
glycolicus DSM 8271]
Length = 176
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 134/175 (76%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K+ V IAGDGQV+ GQ TVMK ARK+R+L G ++AGFAGS ADAFTL
Sbjct: 2 FHATTIVAVKKNNQVAIAGDGQVTFGQATVMKHGARKIRKLYHGKVVAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E +LE++ L R++VEL K+WR D+ LR+LEA++++ADK L+I+G G+V+EP+
Sbjct: 62 FEKFEGRLEEFHGNLQRAAVELVKEWRTDRMLRHLEALLIVADKERILIISGSGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
+ + AIGSGG+YAL+AARAL + SA E+ R+A+ IAA ICVYTN NI +E L
Sbjct: 122 DDIAAIGSGGNYALAAARALARHADLSAGELVREALKIAASICVYTNENITVEEL 176
>gi|328948446|ref|YP_004365783.1| ATP-dependent protease hslV [Treponema succinifaciens DSM 2489]
gi|328448770|gb|AEB14486.1| ATP-dependent protease hslV [Treponema succinifaciens DSM 2489]
Length = 180
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 138/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TT++ VR++G V +AGDGQV++G TVMK NA+KVRR+ G ++ GFAG++ADAFTL
Sbjct: 6 KIRSTTVIAVRRNGKVAMAGDGQVTMGNTVMKGNAKKVRRIYDGKVLTGFAGATADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E+KL+ + L R++VELAK WR ++ + LEA++L+AD L+I+G GDV+EPE
Sbjct: 66 FDKFEEKLKTFNGDLTRAAVELAKLWRTERSMSKLEALLLVADSKKILLISGSGDVIEPE 125
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
N ++AIGSGG+YA +AA A M S+Q SA+EIA+K+++IA IC+YTN N+V+E L
Sbjct: 126 NDILAIGSGGNYAYAAAMAYMESSQFSAKEIAQKSLAIAGQICIYTNSNVVVEEL 180
>gi|317129215|ref|YP_004095497.1| 20S proteasome A and subunit betas [Bacillus cellulosilyticus DSM
2522]
gi|315474163|gb|ADU30766.1| 20S proteasome A and B subunits [Bacillus cellulosilyticus DSM
2522]
Length = 180
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 129/177 (72%), Gaps = 3/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
++ TTI V+ G +AGDGQV+ G V MK A+KVR++ +G ++AGFAGS ADAFT
Sbjct: 3 QIRGTTIFAVKHQGKCAMAGDGQVTFGNAVVMKHTAKKVRKIYRGKVVAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E+KLE++ L R++VE+AKDWR D+ LR LEAM+++ D++ +I G G+V+EP
Sbjct: 63 LFEKFEQKLEEFSGNLQRAAVEMAKDWRSDRVLRKLEAMLIVMDESNLYLIAGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG YAL+A R+L + +A+EIA A+ AADICVYTN I++E L
Sbjct: 123 DDGILAIGSGGHYALAAGRSLKEYAQHLTAKEIAYAALKTAADICVYTNSEIIVEEL 179
>gi|167040336|ref|YP_001663321.1| ATP-dependent protease peptidase subunit [Thermoanaerobacter sp.
X514]
gi|256750732|ref|ZP_05491617.1| 20S proteasome A and B subunits [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914420|ref|ZP_07131736.1| 20S proteasome A and B subunits [Thermoanaerobacter sp. X561]
gi|307724344|ref|YP_003904095.1| 20S proteasome subunits A/B [Thermoanaerobacter sp. X513]
gi|238065944|sp|B0K1T7|HSLV_THEPX RecName: Full=ATP-dependent protease subunit HslV
gi|166854576|gb|ABY92985.1| 20S proteasome, A and B subunits [Thermoanaerobacter sp. X514]
gi|256750315|gb|EEU63334.1| 20S proteasome A and B subunits [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889355|gb|EFK84501.1| 20S proteasome A and B subunits [Thermoanaerobacter sp. X561]
gi|307581405|gb|ADN54804.1| 20S proteasome A and B subunits [Thermoanaerobacter sp. X513]
Length = 176
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 130/175 (74%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ VRK V +AGDGQ++ G+ T++K A+K+RRL G +I GFAGS ADA TL
Sbjct: 2 FKGTTIIAVRKGAKVSVAGDGQITFGENTILKHGAKKIRRLYNGEVIVGFAGSVADALTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E+KLEQY L R++VELA++WR DK LR LEA+++ DK TL+I+G G+V+EP+
Sbjct: 62 SQKFEEKLEQYGGNLKRAAVELAQEWRKDKILRKLEALLIAVDKKDTLLISGTGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ IGSGG+YA++AA AL +T E+IA+KA+ IA+ ICVYTN+NI +ETL
Sbjct: 122 EDVIGIGSGGNYAMAAALALRYNTDLDTEDIAKKALEIASKICVYTNNNITVETL 176
>gi|308051234|ref|YP_003914800.1| HslV component of HslUV peptidase [Ferrimonas balearica DSM 9799]
gi|307633424|gb|ADN77726.1| HslV component of HslUV peptidase [Ferrimonas balearica DSM 9799]
Length = 178
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 128/171 (74%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VVIAGDGQVSLG TVMK NARKVR L G ++AGFAG++ADAFTL E L
Sbjct: 2 TTIVSVRRGDKVVIAGDGQVSLGNTVMKGNARKVRHLHGGKVLAGFAGATADAFTLFELL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL + L R++VELAK WR ++ L+ LEAM+++AD +L+I+G GDV+EPE+ ++
Sbjct: 62 ESKLTAHQGHLTRAAVELAKAWRTERSLQKLEAMLIVADAETSLLISGNGDVVEPEHDII 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +A AL+ +T A +I KA++IA +ICV+TN +E L
Sbjct: 122 AIGSGGNYAQAAGLALLQNTDLGARDICEKALTIAGEICVFTNLTQTIEEL 172
>gi|116626380|ref|YP_828536.1| ATP-dependent protease peptidase subunit [Candidatus Solibacter
usitatus Ellin6076]
gi|122251635|sp|Q01Q19|HSLV_SOLUE RecName: Full=ATP-dependent protease subunit HslV
gi|116229542|gb|ABJ88251.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
family T01B [Candidatus Solibacter usitatus Ellin6076]
Length = 179
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TT++ VR+D VV+AGDGQV+LG V+K++ARK+RRL I+AGFAGS+ADAF L
Sbjct: 4 KIRSTTVICVRRDNKVVMAGDGQVTLGGEVLKSSARKLRRLYNDKILAGFAGSTADAFAL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
R E KLEQ+ L RS VELAK+WR D+ LR+LEA++L++D T +++G GDV+EP+
Sbjct: 64 FSRFESKLEQFNGNLSRSVVELAKEWRTDRVLRHLEALLLVSDTKSTYLVSGNGDVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G++AIGSGG +A +AA AL+ +T+ SA I ++M IA +IC+YTN N+ E L+
Sbjct: 124 EGIVAIGSGGPFATAAATALLRNTKLSARRIVEESMKIAGEICIYTNQNVTFEELE 179
>gi|167037675|ref|YP_001665253.1| ATP-dependent protease peptidase subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|307264859|ref|ZP_07546421.1| 20S proteasome A and B subunits [Thermoanaerobacter wiegelii
Rt8.B1]
gi|320116090|ref|YP_004186249.1| 20S proteasome subunits A/B [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|326389489|ref|ZP_08211056.1| 20S proteasome, A and B subunits [Thermoanaerobacter ethanolicus JW
200]
gi|238065943|sp|B0K9V4|HSLV_THEP3 RecName: Full=ATP-dependent protease subunit HslV
gi|166856509|gb|ABY94917.1| ATP-dependent protease HslVU (ClpYQ) peptidase subunit-like protein
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|306920117|gb|EFN50329.1| 20S proteasome A and B subunits [Thermoanaerobacter wiegelii
Rt8.B1]
gi|319929181|gb|ADV79866.1| 20S proteasome A and B subunits [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|325994494|gb|EGD52919.1| 20S proteasome, A and B subunits [Thermoanaerobacter ethanolicus JW
200]
Length = 176
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 130/175 (74%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ VRK V +AGDGQ++ G+ T++K A+K+RRL G +I GFAGS ADA TL
Sbjct: 2 FKGTTIIAVRKGDKVSVAGDGQITFGENTILKHGAKKIRRLYNGEVIVGFAGSVADALTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E+KLEQY L R++VELA++WR DK LR LEA+++ DK TL+I+G G+V+EP+
Sbjct: 62 SQKFEEKLEQYGGNLKRAAVELAQEWRKDKILRKLEALLIAVDKKDTLLISGTGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ IGSGG+YA++AA AL +T E+IA+KA+ IA+ ICVYTN+NI +ETL
Sbjct: 122 EDVIGIGSGGNYAMAAALALRYNTDLDTEDIAKKALEIASKICVYTNNNITVETL 176
>gi|193213900|ref|YP_001995099.1| ATP-dependent protease peptidase subunit [Chloroherpeton thalassium
ATCC 35110]
gi|193087377|gb|ACF12652.1| 20S proteasome A and B subunits [Chloroherpeton thalassium ATCC
35110]
Length = 175
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M ATT++ V ++G + DGQ++ G T++K + K+R++ G II GFAG++ADA TLL
Sbjct: 1 MRATTVIGVLRNGKAALGSDGQMTYGNTILKHSTTKIRKMHDGKIIVGFAGATADALTLL 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E+KL+ Y +L RS+VELAK+WRMDKYLR LEAM+ + + L+I+G GDV+EPE+
Sbjct: 61 ERFEEKLQAYGGRLDRSAVELAKEWRMDKYLRRLEAMLAVVSREKALIISGTGDVIEPED 120
Query: 133 GVMAIGSGGSYALSAARALMSTQNS-AEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSG YALSAARAL+ N A+ I ++++IA +IC+YTN NI ++ +
Sbjct: 121 GIVAIGSGSMYALSAARALLKHTNCDAKTIVEESLNIAGEICIYTNTNIQIQEI 174
>gi|300692948|ref|YP_003753943.1| peptidase component of the HslUV protease [Ralstonia solanacearum
PSI07]
gi|299080008|emb|CBJ52683.1| peptidase component of the HslUV protease [Ralstonia solanacearum
PSI07]
Length = 178
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/176 (55%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVR + G ++ GFAG++ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIYDGKVLVGFAGATADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KL++Y LLR++V+LAKDWR D+ LR+LEAM+++AD+ TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAA+AL +T+ S E+ K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALAENTELSPREVVEKSLRIAGELCIYTNTNFVIETLE 178
>gi|17544762|ref|NP_518164.1| ATP-dependent protease peptidase subunit [Ralstonia solanacearum
GMI1000]
gi|21759166|sp|Q8Y3D7|HSLV_RALSO RecName: Full=ATP-dependent protease subunit HslV
gi|17427051|emb|CAD13571.1| probable atp-dependent protease hslv protein [Ralstonia
solanacearum GMI1000]
Length = 178
Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVR + G ++ GFAG++ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIYDGKVLVGFAGATADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KL++Y LLR++V+LAKDWR D+ LR+LEAM+++AD+ TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAA+ALM +T+ + ++ K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALMENTELAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178
>gi|224532185|ref|ZP_03672817.1| ATP-dependent protease HslV [Borrelia valaisiana VS116]
gi|224511650|gb|EEF82056.1| ATP-dependent protease HslV [Borrelia valaisiana VS116]
Length = 182
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 132/178 (74%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA TL
Sbjct: 3 FKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGRILAGFAGSTSDAITLF 62
Query: 73 ERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV+E
Sbjct: 63 EKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSNNILLISGTGDVVE 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
PE V++IGSGG+YA SAA A M + SA E+AR+++ IAA +C+YTN NIVLE ++
Sbjct: 123 PEEDVISIGSGGNYAYSAALAYMENKKLSAFEVARRSLKIAARVCIYTNSNIVLEEIE 180
>gi|313892579|ref|ZP_07826166.1| ATP-dependent protease HslVU, peptidase subunit [Dialister
microaerophilus UPII 345-E]
gi|329121221|ref|ZP_08249848.1| heat shock protein HslV [Dialister micraerophilus DSM 19965]
gi|313118976|gb|EFR42181.1| ATP-dependent protease HslVU, peptidase subunit [Dialister
microaerophilus UPII 345-E]
gi|327470155|gb|EGF15618.1| heat shock protein HslV [Dialister micraerophilus DSM 19965]
Length = 176
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 128/175 (73%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ATTI+ V+KDG +AGDGQV++G V MK ARKVRRL G +IAGFAGS ADAF L
Sbjct: 2 FNATTIIAVKKDGHTAVAGDGQVTMGNAVIMKNTARKVRRLYNGKVIAGFAGSVADAFAL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E KL LLR++VE AKDWR D+ L+ LEA++++ D T +++G G+V+EP+
Sbjct: 62 FDKFEMKLSDCNGNLLRAAVEFAKDWRRDRVLQKLEALLIMTDGTHLFLVSGSGEVIEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+Y +A T+ SA EIA K+++IAADICVYTNHN+++E +
Sbjct: 122 DGILAIGSGGNYALAAARALNAETELSAREIAEKSINIAADICVYTNHNVIVEEI 176
>gi|167561104|ref|ZP_02354020.1| ATP-dependent protease peptidase subunit [Burkholderia oklahomensis
EO147]
gi|167568323|ref|ZP_02361197.1| ATP-dependent protease peptidase subunit [Burkholderia oklahomensis
C6786]
Length = 178
Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/176 (55%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+ E KLE++ L R++VELAKDWR D+ LR LEAM++ AD + TLVITG GDVL+PE
Sbjct: 63 LDLFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADASTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T S +I KA+ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTDLSPRDIVEKALEIAGDMCIYTNHNRIIETIE 178
>gi|332524480|ref|ZP_08400689.1| ATP-dependent protease subunit HslV [Rubrivivax benzoatilyticus
JA2]
gi|332107798|gb|EGJ09022.1| ATP-dependent protease subunit HslV [Rubrivivax benzoatilyticus
JA2]
Length = 179
Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL+VR+ +V + GDGQV+LG V+K++ARKVR+L + ++AGFAG++ADAFTL
Sbjct: 4 FHGTTILSVRRGPLVALGGDGQVTLGTIVVKSSARKVRKLYRDQVLAGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KLE++ L R+++EL KDWR D+ LR LEAM+ +AD T +L+ITG GDVLEPE+
Sbjct: 64 ERFEAKLEKHQGHLQRAAIELTKDWRTDRVLRRLEAMLAVADATSSLIITGNGDVLEPEH 123
Query: 133 GVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG +A L T+ + ++I ++++ IA D+C+YTN + +E L
Sbjct: 124 GIVAIGSGGAYAQAAARALLQHTELAPQDIVKRSLEIAGDLCIYTNQSHTIEVL 177
>gi|145640469|ref|ZP_01796053.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
R3021]
gi|145275055|gb|EDK14917.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
22.4-21]
Length = 150
Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/149 (63%), Positives = 122/149 (81%), Gaps = 2/149 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRKGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++P E+ +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIA 162
+AIGSGG+YALSAARAL+ +T+ SA EI
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAXEIC 150
>gi|114776987|ref|ZP_01452007.1| 20S proteasome, A and B subunits [Mariprofundus ferrooxydans PV-1]
gi|114552508|gb|EAU54968.1| 20S proteasome, A and B subunits [Mariprofundus ferrooxydans PV-1]
Length = 185
Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/176 (55%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ M TTI VRK+ V I GDGQV+LG TV+K RKVR + G I+ GFAGS+ADA
Sbjct: 4 ISMRGTTICCVRKNSEVAIGGDGQVTLGDTVVKHGGRKVRSIRNGAILTGFAGSTADAMN 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ER E KL+++ L+R++V LAK+WR DKYLR LEAM+++AD TL+I+G GDVLEP
Sbjct: 64 LFERFEAKLDEHGGSLMRAAVGLAKEWRTDKYLRQLEAMMIVADADNTLIISGNGDVLEP 123
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++GV AIGSGG+YA +AA AL+ ++ A +IAR+AM IAA+IC+YTN NI ++++
Sbjct: 124 DDGVAAIGSGGAYAKAAATALVHHSELKASDIAREAMLIAANICIYTNSNITIKSI 179
>gi|229086383|ref|ZP_04218559.1| ATP-dependent protease hslV [Bacillus cereus Rock3-44]
gi|228696899|gb|EEL49708.1| ATP-dependent protease hslV [Bacillus cereus Rock3-44]
Length = 161
Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 122/161 (75%), Gaps = 4/161 (2%)
Query: 29 IAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
+AGDGQV+ G V MK ARKVR+L +G ++AGFAGS ADAFTL E E KLE+Y L
Sbjct: 1 MAGDGQVTFGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTLFEMFEGKLEEYNGNLQ 60
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
R++VE+AK WR DK LR LEAM+++ D+T L+++G G+V+EP++G++AIGSGG YAL+A
Sbjct: 61 RAAVEMAKQWRGDKMLRQLEAMLIVMDQTTLLLVSGTGEVIEPDDGILAIGSGGHYALAA 120
Query: 148 ARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
RAL S +A+ IA+ ++ IA DICVYTNHNI++E L
Sbjct: 121 GRALKQHASDHLTAKAIAKASLEIAGDICVYTNHNIIVEEL 161
>gi|313500976|gb|ADR62342.1| ATP-dependent protease hslV [Pseudomonas putida BIRD-1]
Length = 162
Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/162 (59%), Positives = 129/162 (79%), Gaps = 1/162 (0%)
Query: 29 IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER E +LE++ L+R
Sbjct: 1 MGGDGQVSLGNTVMKGNAKKVRRLYHGQVIAGFAGATADAFTLFERFEGQLEKHQGHLVR 60
Query: 89 SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA 148
++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++A+GSGG+YA +AA
Sbjct: 61 AAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLIAMGSGGAYAQAAA 120
Query: 149 RALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
RAL++ T SA EIA A++IA DICV+TNHN+ +E + D
Sbjct: 121 RALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAD 162
>gi|77920005|ref|YP_357820.1| ATP-dependent protease peptidase subunit [Pelobacter carbinolicus
DSM 2380]
gi|123573598|sp|Q3A1V7|HSLV_PELCD RecName: Full=ATP-dependent protease subunit HslV
gi|77546088|gb|ABA89650.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Pelobacter carbinolicus DSM 2380]
Length = 177
Score = 187 bits (476), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTI+ VR G V +AGDGQV+LG TVMK ARK+RR+ +G I+AGFAGS+ADAFTL
Sbjct: 3 IRGTTIICVRHQGQVTMAGDGQVTLGNTVMKHGARKIRRMYEGRILAGFAGSTADAFTLF 62
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E K++++ L +++V LAKDWR D+ LR LEA++++AD TLV++G GDV+EP++
Sbjct: 63 EKFEAKVQEFHGNLPKAAVALAKDWRTDQILRKLEALLIVADTNTTLVLSGAGDVIEPDD 122
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYAL+AARAL +E+IA +A+ IA +IC+YTN +I E+L
Sbjct: 123 GIAAIGSGGSYALAAARALTRHAGLPSEQIATEALRIAGEICIYTNDHISSESLP 177
>gi|71274747|ref|ZP_00651035.1| 20S proteasome, A and B subunits [Xylella fastidiosa Dixon]
gi|71901197|ref|ZP_00683300.1| 20S proteasome, A and B subunits [Xylella fastidiosa Ann-1]
gi|170730011|ref|YP_001775444.1| ATP-dependent protease peptidase subunit [Xylella fastidiosa M12]
gi|71164479|gb|EAO14193.1| 20S proteasome, A and B subunits [Xylella fastidiosa Dixon]
gi|71729041|gb|EAO31169.1| 20S proteasome, A and B subunits [Xylella fastidiosa Ann-1]
gi|167964804|gb|ACA11814.1| heat shock protein [Xylella fastidiosa M12]
Length = 183
Score = 187 bits (476), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 140/175 (80%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
HATTI+ VR+ V IAGDGQV+LG TVMK+NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 FHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE++ QL R++VELAKDWR ++ L LEA++++ DK +LVI+G GDV+EPE
Sbjct: 70 FELFEAKLEKH-GQLSRAAVELAKDWRTERRLGKLEALLVVVDKETSLVISGTGDVIEPE 128
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSYALSAARALM+ T A IA +A+ IA +IC+YTN N+V++ L
Sbjct: 129 DGIVAIGSGGSYALSAARALMAHTALDARTIATEAIGIAGNICIYTNGNVVVDEL 183
>gi|320105388|ref|YP_004180978.1| 20S proteasome subunits A/B [Terriglobus saanensis SP1PR4]
gi|319923909|gb|ADV80984.1| 20S proteasome A and B subunits [Terriglobus saanensis SP1PR4]
Length = 219
Score = 187 bits (476), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 134/181 (74%), Gaps = 7/181 (3%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT++ VR++G VV+A DGQV+LG VMK A+K+RRL + ++AGFAGS+ADAF+L
Sbjct: 37 RIRSTTVICVRRNGHVVMAADGQVTLGSAVMKHGAKKIRRLYQDKVLAGFAGSTADAFSL 96
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
R E KLEQ+ L R++VELAKDWR DK LR LEA++++AD +++G GDV+EP+
Sbjct: 97 FARFESKLEQFAGNLSRAAVELAKDWRTDKMLRQLEALLIVADVNQVYLLSGNGDVIEPD 156
Query: 132 N-----GVMA-IGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
GV+A IGSGGS+A +AA ALM +T +A +IA K+M IA +IC+YTN ++ +E
Sbjct: 157 AIAGGVGVVATIGSGGSFAQAAAYALMENTDLTARQIAEKSMKIAGEICIYTNDSVTIEE 216
Query: 185 L 185
L
Sbjct: 217 L 217
>gi|33152976|ref|NP_874329.1| ATP-dependent protease peptidase subunit [Haemophilus ducreyi
35000HP]
gi|47605650|sp|Q7VKB4|HSLV_HAEDU RecName: Full=ATP-dependent protease subunit HslV
gi|33149201|gb|AAP96718.1| ATP-dependent protease HslV [Haemophilus ducreyi 35000HP]
Length = 173
Score = 187 bits (476), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 128/170 (75%), Gaps = 2/170 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG V K RKVRRL K +I GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNCVEKGTVRKVRRLYKDKVITGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLVKSAVELAKEWRTERALRKLEAMMIVANESEFLLVSGSGDVIEPEQDVL 121
Query: 136 AIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLE 183
AIGSGG++A SAA AL+ T+N +A++I +A+ IA DI +Y+NHN V+E
Sbjct: 122 AIGSGGNFAKSAALALLRTENNLTAKQIVAEALKIAGDIDIYSNHNHVIE 171
>gi|299068384|emb|CBJ39608.1| peptidase component of the HslUV protease [Ralstonia solanacearum
CMR15]
Length = 178
Score = 187 bits (476), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVR + G ++ GFAG++ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIFDGKVLVGFAGATADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KL++Y LLR++V+LAKDWR D+ LR+LEAM+++AD TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADHESTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAA+ALM +T+ + ++ K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALMENTELAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178
>gi|299536757|ref|ZP_07050065.1| ATP-dependent protease peptidase subunit [Lysinibacillus fusiformis
ZC1]
gi|298727769|gb|EFI68336.1| ATP-dependent protease peptidase subunit [Lysinibacillus fusiformis
ZC1]
Length = 181
Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 130/179 (72%), Gaps = 4/179 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
++HATTI V +G +AGDGQV+LG V MK ARKVRRL G ++AGFAGS ADAFT
Sbjct: 3 QIHATTIFAVHHNGGCAMAGDGQVTLGNAVVMKGTARKVRRLFNGQVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KL +Y L R++VE+AK WR DK LR LEAM+L+ DKT L+++G G+V+EP
Sbjct: 63 LFEMFEGKLNEYNGNLQRAAVEVAKQWRGDKMLRQLEAMLLVMDKTTLLLVSGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETLK 186
++G++AIGSGG+YALSA RAL +A EIA A+ AA+ICV+TNHNI++E L
Sbjct: 123 DDGILAIGSGGNYALSAGRALKKYAGETMTAREIAEAALETAAEICVFTNHNIIVEALN 181
>gi|304320678|ref|YP_003854321.1| Multispecific proteasome protease [Parvularcula bermudensis
HTCC2503]
gi|303299580|gb|ADM09179.1| Multispecific proteasome protease [Parvularcula bermudensis
HTCC2503]
Length = 180
Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 132/176 (75%), Gaps = 6/176 (3%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTIL V++ V + GDGQV+LG+ V+ K +A+KVRRL G +++GFAG +ADAFTLLER
Sbjct: 2 TTILAVQRGREVAVGGDGQVTLGERVVSKGDAKKVRRLADGAVLSGFAGGTADAFTLLER 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN-- 132
LE KLEQY QLLRS+VELAKDWR D+YLR LEAM+++AD + L+++G+GDV+EPE
Sbjct: 62 LEGKLEQYRGQLLRSAVELAKDWRTDRYLRRLEAMLIVADASQMLMVSGLGDVIEPEKTG 121
Query: 133 --GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGGSY +A +T SA EI K++ IA+ + V+TN +++ETL
Sbjct: 122 DVGILAIGSGGSYAQAAATALAQNTDLSAREIVEKSLIIASGLDVFTNDRLIVETL 177
>gi|154249396|ref|YP_001410221.1| ATP-dependent protease peptidase subunit [Fervidobacterium nodosum
Rt17-B1]
gi|154153332|gb|ABS60564.1| 20S proteasome A and B subunits [Fervidobacterium nodosum Rt17-B1]
Length = 188
Score = 187 bits (475), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 128/173 (73%), Gaps = 1/173 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
+TT+L ++KDG VV+A DGQV+ G TVMK ARKVR++G G ++AGFAG+ ADA TLLE
Sbjct: 16 RSTTVLAIKKDGKVVMAADGQVTYGATVMKGTARKVRKIGDGKVLAGFAGAVADAMTLLE 75
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
R E K ++ LL++++ELAKDWR+D+ LR LEAM+++ADK L+++G G+V++P+
Sbjct: 76 RFENKYREWNGNLLKAAIELAKDWRLDRALRRLEAMLIVADKDNLLLLSGTGEVIQPDED 135
Query: 134 VMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+AIGSGG Y +A L +T A +I +AM IA++IC+YTN NI +E L
Sbjct: 136 VIAIGSGGPYALAAARALLRNTDFDARKIVEEAMKIASEICIYTNENITIEEL 188
>gi|94676999|ref|YP_588628.1| ATP-dependent protease peptidase subunit [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
gi|166221625|sp|Q1LTT6|HSLV_BAUCH RecName: Full=ATP-dependent protease subunit HslV
gi|94220149|gb|ABF14308.1| ATP-dependent protease HslV [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 180
Score = 187 bits (475), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 130/172 (75%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAFTLLER 74
TTI++VR++G VVI GDGQ ++G T+MK N RKVRRL + +IAGFAG +ADAFTL E
Sbjct: 2 TTIISVRRNGHVVIGGDGQATIGNTIMKGNVRKVRRLYYNDKVIAGFAGGTADAFTLFEL 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E+KLE Y L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PE +
Sbjct: 62 FERKLESYQGHLVKAAVELAKDWRTDRRLRRLEALLAVADENASLIITGNGDVIQPEKDL 121
Query: 135 MAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG YA SAARAL+ N SA EI +K++ IA DIC+YTN +E L
Sbjct: 122 IAIGSGGPYAQSAARALLENTNFSAREIVKKSLVIAGDICIYTNQFHTIEEL 173
>gi|209877204|ref|XP_002140044.1| proteasome A-type and B-type, ATP-dependent protease
[Cryptosporidium muris RN66]
gi|209555650|gb|EEA05695.1| proteasome A-type and B-type, ATP-dependent protease, putative
[Cryptosporidium muris RN66]
Length = 208
Score = 187 bits (475), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 131/174 (75%), Gaps = 4/174 (2%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H+TTIL+VR +V+ GDGQVS G V+K NARK+R++G NI+ GF+G++AD FTL+E
Sbjct: 35 HSTTILSVRTKNSLVMIGDGQVSQGNLVVKPNARKIRKIG--NIVLGFSGATADCFTLVE 92
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KL+ Y QL R+ VELA+ WR +KYLR+L+A+I+ ADK +TL +TG GDVLE +
Sbjct: 93 RLESKLDNYSGQLTRACVELARSWRTEKYLRHLQAVIIAADKNVTLQLTGNGDVLESYDN 152
Query: 134 VMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+MAIGSGG YA +AARAL+ + + A +A AM IAAD+CV TNHN V+E +
Sbjct: 153 IMAIGSGGPYAAAAARALVYSNLELDALYVATSAMKIAADMCVMTNHNFVIEEI 206
>gi|294102501|ref|YP_003554359.1| 20S proteasome A and B subunits [Aminobacterium colombiense DSM
12261]
gi|293617481|gb|ADE57635.1| 20S proteasome A and B subunits [Aminobacterium colombiense DSM
12261]
Length = 180
Score = 187 bits (475), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 133/174 (76%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL VR++ V +AGDGQV+LG ++KA ARKVRRL KG ++AGFAGS+ADA TLL
Sbjct: 5 FKGTTILCVRQENSVAMAGDGQVTLGDQIIKAGARKVRRLYKGKVLAGFAGSTADAMTLL 64
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E +LE+ L+R++V L K+WR+D+ LR LEA++L+AD+ TL+++G GDVLEPEN
Sbjct: 65 ERFEARLEENSGDLMRAAVSLVKEWRLDRALRKLEALMLVADEEHTLLLSGAGDVLEPEN 124
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSG +AL+AARA M S+ A +IAR+A+ IAADIC+YT+ I +E +
Sbjct: 125 NVAAIGSGAGFALAAARAFMESSDKKASDIARRAIEIAADICIYTDKEITVEVI 178
>gi|187930770|ref|YP_001901257.1| ATP-dependent protease peptidase subunit [Ralstonia pickettii 12J]
gi|309780234|ref|ZP_07674985.1| ATP-dependent protease HslV [Ralstonia sp. 5_7_47FAA]
gi|238065931|sp|B2U7X2|HSLV_RALPJ RecName: Full=ATP-dependent protease subunit HslV
gi|187727660|gb|ACD28825.1| 20S proteasome A and B subunits [Ralstonia pickettii 12J]
gi|308920937|gb|EFP66583.1| ATP-dependent protease HslV [Ralstonia sp. 5_7_47FAA]
Length = 178
Score = 187 bits (475), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 98/176 (55%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK +ARKVR + G ++ GFAG++ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGSARKVRAIYDGKVLVGFAGATADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KL+++ LLRS+V+LAKDWR D+ LR+LEAM+++AD+ TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLQKHQGNLLRSAVDLAKDWRTDRALRHLEAMLIVADREATLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA SAA+ALM +T + ++ K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGSYAQSAAKALMENTDLAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178
>gi|163791335|ref|ZP_02185748.1| ATP-dependent protease peptidase subunit [Carnobacterium sp. AT7]
gi|159873414|gb|EDP67505.1| ATP-dependent protease peptidase subunit [Carnobacterium sp. AT7]
Length = 179
Score = 187 bits (475), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 133/177 (75%), Gaps = 3/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI ++ DG +AGDGQV++G Q +MK ARKVRR+ ++ GFAGS ADAFT
Sbjct: 3 EFHATTIFAIQHDGKCAMAGDGQVTMGEQVIMKGTARKVRRIYNDEVLVGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR D+ ++ LEA++++ +K L+++G G+V++P
Sbjct: 63 LEEKFEAKLHEYKGNLTRAAVELAQEWRSDRAMQKLEALLIVMNKEEMLMVSGGGEVIQP 122
Query: 131 ENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG++AL+A RAL + +A +IA ++++ AADICV+TNHNI++E L
Sbjct: 123 DDGILAIGSGGNFALAAGRALKKLGKGLTAAQIAEESLNTAADICVFTNHNIIVEEL 179
>gi|269836346|ref|YP_003318574.1| 20S proteasome A and B subunits [Sphaerobacter thermophilus DSM
20745]
gi|269785609|gb|ACZ37752.1| 20S proteasome A and B subunits [Sphaerobacter thermophilus DSM
20745]
Length = 190
Score = 187 bits (475), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 132/185 (71%), Gaps = 1/185 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
++ + + HATTIL V++DG V +AGDGQV+ G VMK ARK+R L G ++AGFAG+ A
Sbjct: 2 QNQSTRWHATTILGVQRDGDVALAGDGQVTYGDVVMKHGARKIRTLLDGQVVAGFAGAVA 61
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DA TL E+ E L + L R++VELAK+WR D+YLR LEA +++AD LVI+G GD
Sbjct: 62 DALTLFEKFETHLRDWDGNLRRAAVELAKEWRTDRYLRRLEAQLIVADGDSLLVISGEGD 121
Query: 127 VLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+EP++GV AIG+G YA +AARAL+ T A EIA AM + AD+C+YTN +IV+ET
Sbjct: 122 VIEPDDGVAAIGTGAPYATAAARALLQHTDMPAREIAEAAMRVTADLCIYTNDHIVIETT 181
Query: 186 KVGDE 190
+ DE
Sbjct: 182 RRQDE 186
>gi|83748662|ref|ZP_00945680.1| ATP-dependent protease hslV [Ralstonia solanacearum UW551]
gi|207727529|ref|YP_002255923.1| atp-dependent protease hslv protein [Ralstonia solanacearum MolK2]
gi|207741921|ref|YP_002258313.1| atp-dependent protease hslv protein [Ralstonia solanacearum
IPO1609]
gi|300705553|ref|YP_003747156.1| peptidase component of the hsluv protease [Ralstonia solanacearum
CFBP2957]
gi|83724706|gb|EAP71866.1| ATP-dependent protease hslV [Ralstonia solanacearum UW551]
gi|206590766|emb|CAQ56378.1| atp-dependent protease hslv protein [Ralstonia solanacearum MolK2]
gi|206593307|emb|CAQ60234.1| atp-dependent protease hslv protein [Ralstonia solanacearum
IPO1609]
gi|299073217|emb|CBJ44575.1| peptidase component of the HslUV protease [Ralstonia solanacearum
CFBP2957]
Length = 178
Score = 187 bits (474), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/176 (54%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK +ARKVR + G ++ GFAG++ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGSARKVRTIYDGKVLVGFAGATADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KL++Y LLR++V+LAKDWR D+ LR+LEAM+++AD+ TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAA+AL+ +T+ + ++ K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALVENTELAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178
>gi|224533762|ref|ZP_03674350.1| ATP-dependent protease HslV [Borrelia burgdorferi CA-11.2a]
gi|224513055|gb|EEF83418.1| ATP-dependent protease HslV [Borrelia burgdorferi CA-11.2a]
Length = 182
Score = 187 bits (474), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 131/178 (73%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA TL
Sbjct: 3 FKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAITLF 62
Query: 73 ERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV+E
Sbjct: 63 EKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSNNILLISGTGDVVE 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
PE V++IGSGG+YA SAA A M + SA E+A K++ IAA +C+YTN NIVLE ++
Sbjct: 123 PEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALKSLKIAARVCIYTNSNIVLEEIE 180
>gi|315639033|ref|ZP_07894203.1| ATP-dependent protease HslVU [Campylobacter upsaliensis JV21]
gi|315480945|gb|EFU71579.1| ATP-dependent protease HslVU [Campylobacter upsaliensis JV21]
Length = 181
Score = 187 bits (474), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 126/181 (69%), Gaps = 5/181 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVSLG TVMK NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSLGNTVMKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
+ E L+ LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDVLEPE
Sbjct: 62 DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRKHIFLLSGTGDVLEPED 121
Query: 132 NGVMAIGSGGSYALSAARALMS-TQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
N + AIGSGG+YALSAARAL QN EE+ + ++ IA +ICVYTN NI +T + D
Sbjct: 122 NQIAAIGSGGNYALSAARALKKHAQNLDEEELVKSSLQIAGEICVYTNTNI--KTYVIED 179
Query: 190 E 190
E
Sbjct: 180 E 180
>gi|325982876|ref|YP_004295278.1| ATP-dependent protease HslVU, peptidase subunit [Nitrosomonas sp.
AL212]
gi|325532395|gb|ADZ27116.1| ATP-dependent protease HslVU, peptidase subunit [Nitrosomonas sp.
AL212]
Length = 173
Score = 186 bits (473), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ V + GDGQV+LG V K++ARKVRRL I+AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGHHVALGGDGQVTLGAVVAKSSARKVRRLYHDKILAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + ++R++VELAKDWR D+ LR LEAM+++A++ TL++TG GD++EPE G+
Sbjct: 62 EGKLEAHNGHIMRAAVELAKDWRTDRILRRLEAMLVVANEEATLIVTGAGDIIEPELGIA 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGGSYAL+AARAL+ +T +EI +KA++IA DIC+YTN + ++E +
Sbjct: 122 AIGSGGSYALAAARALLENTDLPPQEIVKKALTIAGDICIYTNQDHIIEMI 172
>gi|323339877|ref|ZP_08080146.1| heat shock protein HslV [Lactobacillus ruminis ATCC 25644]
gi|323092750|gb|EFZ35353.1| heat shock protein HslV [Lactobacillus ruminis ATCC 25644]
Length = 180
Score = 186 bits (473), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 130/179 (72%), Gaps = 3/179 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADA 68
A+ HATTI VR +G +AGDGQV++G+ V MK A KVR++ G ++ GFAGS ADA
Sbjct: 2 AISFHATTICAVRHNGKTAMAGDGQVTMGEKVIMKGTAHKVRKIYDGKVVVGFAGSVADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F L +R EKKL QY L R++VELA++WR D+ L+ LEA++++ D L+++G G+V+
Sbjct: 62 FNLEDRFEKKLNQYSGNLQRAAVELAQEWRSDQALQKLEALLIVMDAKNLLLVSGSGEVI 121
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
EP++ V+AIGSGG+YAL+AA+A+ + SA EIA+ A+ IA DI ++TNHNI+ E L
Sbjct: 122 EPDDDVLAIGSGGNYALAAAKAMTKYADGMSAAEIAKAAIGIAGDIDIFTNHNIICEEL 180
>gi|241664960|ref|YP_002983320.1| ATP-dependent protease peptidase subunit [Ralstonia pickettii 12D]
gi|240866987|gb|ACS64648.1| 20S proteasome A and B subunits [Ralstonia pickettii 12D]
Length = 178
Score = 186 bits (473), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK +ARKVR + G ++ GFAG++ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGSARKVRAIYDGKVLVGFAGATADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KL+++ LLRS+V+LAKDWR D+ LR+LEAM+++AD+ TL+ITG GDVL+PE
Sbjct: 63 LDRFEAKLQKHQGNLLRSAVDLAKDWRTDRALRHLEAMLIVADREATLIITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA SAA+ALM +T + ++ K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGSYAQSAAKALMENTDLAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178
>gi|328957572|ref|YP_004374958.1| ATP-dependent protease subunit HslV [Carnobacterium sp. 17-4]
gi|328673896|gb|AEB29942.1| ATP-dependent protease subunit HslV [Carnobacterium sp. 17-4]
Length = 179
Score = 186 bits (473), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 134/177 (75%), Gaps = 3/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI ++ +G +AGDGQV++G Q +MK ARKVRR+ ++ GFAGS ADAFT
Sbjct: 3 EFHATTIFAIQHNGKCAMAGDGQVTMGEQVIMKGTARKVRRIYNDEVLVGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR D+ ++ LEA++++ +K L+++G G+V++P
Sbjct: 63 LEEKFEAKLHEYKGNLTRAAVELAQEWRSDRAMQKLEALLIVMNKEEMLMVSGGGEVIQP 122
Query: 131 ENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG++AL+A RAL + +A +IA+++++ AADICV+TNHNI++E L
Sbjct: 123 DDGILAIGSGGNFALAAGRALKKLGKDLTAAQIAQESLTTAADICVFTNHNIIVEEL 179
>gi|157164513|ref|YP_001466812.1| ATP-dependent protease peptidase subunit [Campylobacter concisus
13826]
gi|166221631|sp|A7ZDF4|HSLV_CAMC1 RecName: Full=ATP-dependent protease subunit HslV
gi|112801304|gb|EAT98648.1| ATP-dependent protease HslV [Campylobacter concisus 13826]
Length = 177
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 121/170 (71%), Gaps = 2/170 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R++ G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKAVIGGDGQVSFGNTVLKGNAVKIRKIHNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ EK LE LL++ +E +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFEKNLEHTKGDLLKAVIEFSKEWRKDKYLRKLEAMMLVLDRDKIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI 180
G + AIGSGG+YALSAARAL + EE+ ++++ IA +IC+YTN NI
Sbjct: 122 GKIAAIGSGGNYALSAARALDKFADIDEEELVKESLKIAGEICIYTNTNI 171
>gi|238921644|ref|YP_002935159.1| ATP-dependent protease peptidase subunit [Edwardsiella ictaluri
93-146]
gi|238871213|gb|ACR70924.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 163
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/159 (56%), Positives = 119/159 (74%), Gaps = 1/159 (0%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
+I GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E E+KLE + L+
Sbjct: 1 MIGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELFERKLELHQGHLV 60
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
+++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 61 KAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQAA 120
Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
ARAL+ +T+ A +I KA+ IA DIC+YTN +E L
Sbjct: 121 ARALLENTELGAHDIVEKALGIAGDICIYTNQFHTIEEL 159
>gi|126654061|ref|ZP_01725887.1| ATP-dependent protease peptidase subunit [Bacillus sp. B14905]
gi|169827114|ref|YP_001697272.1| ATP-dependent protease peptidase subunit [Lysinibacillus sphaericus
C3-41]
gi|238065884|sp|B1HQJ5|HSLV_LYSSC RecName: Full=ATP-dependent protease subunit HslV
gi|126589441|gb|EAZ83588.1| ATP-dependent protease peptidase subunit [Bacillus sp. B14905]
gi|168991602|gb|ACA39142.1| ATP-dependent protease hslV [Lysinibacillus sphaericus C3-41]
Length = 181
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 130/178 (73%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
++HATTI V +G +AGDGQV+LG V MK A+KVRRL G ++AGFAGS ADAFT
Sbjct: 3 QIHATTIFAVHHNGGCAMAGDGQVTLGNAVVMKGTAKKVRRLFNGQVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KL +Y L R++VE+AK WR DK LR LEAM+L+ DKT L+++G G+V+EP
Sbjct: 63 LFEMFEGKLNEYNGNLQRAAVEVAKQWRGDKMLRQLEAMLLVMDKTTLLLVSGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YALSA RAL +A EIA A+ AA+ICV+TNHNI++E L
Sbjct: 123 DDGILAIGSGGNYALSAGRALKKYAGETMTAREIAEAALETAAEICVFTNHNIIVEAL 180
>gi|121611468|ref|YP_999275.1| ATP-dependent protease peptidase subunit [Verminephrobacter
eiseniae EF01-2]
gi|189036250|sp|A1WRK0|HSLV_VEREI RecName: Full=ATP-dependent protease subunit HslV
gi|121556108|gb|ABM60257.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Verminephrobacter eiseniae EF01-2]
Length = 179
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 128/178 (71%), Gaps = 5/178 (2%)
Query: 13 MHATTILTVRKD---GV-VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TTIL+VR+ GV V I GDGQV+LG V+K ARKVR+L G ++AGFAG++ADA
Sbjct: 2 FHGTTILSVRRQTPQGVQVAIGGDGQVTLGAIVVKGTARKVRKLHHGKVLAGFAGATADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL ER E KL+++ L+RS++EL KDWR D+ LR LEAM+ +AD+ +L+ITG GDVL
Sbjct: 62 FTLFERFEAKLDKHQGHLVRSAIELTKDWRTDRVLRRLEAMLAVADQESSLIITGNGDVL 121
Query: 129 EPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPE G++AIGSGG +A L T SA +I ++A+ IA ++C+YTN + +ETL
Sbjct: 122 EPEQGIIAIGSGGAYANAAAKALLNHTDLSAADIVKQALEIAGELCIYTNMHHTIETL 179
>gi|1448947|gb|AAB04621.1| heat shock protein [Borrelia burgdorferi]
Length = 182
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 132/178 (74%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA TL
Sbjct: 3 FKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAITLF 62
Query: 73 ERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
E+ E+K+++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV+E
Sbjct: 63 EKFEEKIKRKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSNNILLISGTGDVVE 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
PE V++IGSGG+YA SAA A M + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 123 PEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180
>gi|163784237|ref|ZP_02179160.1| ATP-dependent protease peptidase subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159880490|gb|EDP74071.1| ATP-dependent protease peptidase subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 162
Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 122/160 (76%), Gaps = 1/160 (0%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
VIAGDGQV+LG +VMKA A+K+R+L G +I GFAGS+AD L+ERLE+KL +Y LL
Sbjct: 3 VIAGDGQVTLGNSVMKATAKKIRKLNDGKVIVGFAGSAADGLALMERLEEKLNKYGGNLL 62
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
R+SVELAK+WRMDK+LR LEA+++ ADK L+I+G GDV++P+ ++A GSGG +A SA
Sbjct: 63 RASVELAKEWRMDKFLRRLEAVLIAADKEHMLLISGNGDVIQPDEPILATGSGGDFARSA 122
Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
A AL +T A +I +AM IA +IC+YTN NI +E ++
Sbjct: 123 ALALYRNTDLDARKIVEEAMKIAGEICIYTNQNITIEEIQ 162
>gi|269925576|ref|YP_003322199.1| 20S proteasome A and B subunits [Thermobaculum terrenum ATCC
BAA-798]
gi|269789236|gb|ACZ41377.1| 20S proteasome A and B subunits [Thermobaculum terrenum ATCC
BAA-798]
Length = 185
Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 129/180 (71%), Gaps = 1/180 (0%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H M ATTIL V +DG++ +AGDGQV+ G ++ K ARKVR L G ++ GFAG+ AD
Sbjct: 3 HNPPMMRATTILAVLRDGLLAMAGDGQVTFGDSIFKHKARKVRTLYDGKVLVGFAGAVAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
A TL ER E +L+QY L RS+VELAK WR D+YLR LEA +++ D L+ITG G+V
Sbjct: 63 ALTLFERFESQLQQYSGDLRRSAVELAKQWRTDRYLRPLEAELIVGDPGQLLLITGQGEV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
+EP+ G++AIGSG YAL+AA+AL+ N AE I +AM IAA++C+YTN NI +ET++
Sbjct: 123 IEPDEGILAIGSGSVYALAAAQALLRHTNMDAEHITLEAMKIAAELCIYTNDNITIETIR 182
>gi|304560537|gb|ADM43201.1| ATP-dependent protease HslV [Edwardsiella tarda FL6-60]
Length = 163
Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/159 (56%), Positives = 119/159 (74%), Gaps = 1/159 (0%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
+I GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E E+KLE + L+
Sbjct: 1 MIGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELFERKLELHQGHLV 60
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
+++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 61 KAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQAA 120
Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
ARAL+ +T+ A +I KA+ IA DIC+YTN +E L
Sbjct: 121 ARALLENTELGARDIVEKALGIAGDICIYTNQFHTIEEL 159
>gi|330836613|ref|YP_004411254.1| ATP-dependent protease hslV [Spirochaeta coccoides DSM 17374]
gi|329748516|gb|AEC01872.1| ATP-dependent protease hslV [Spirochaeta coccoides DSM 17374]
Length = 177
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 130/177 (73%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TTI+ VR+ G V IAGDGQV+ G TVMK NARKVR L G II GFAG++ADAFT
Sbjct: 1 MSFKGTTIIAVRRGGHVAIAGDGQVTAGDTVMKGNARKVRTLYDGKIIIGFAGATADAFT 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KL+++ L R++V+LAK+WR+D+ LR LEAM+L +D + +I+G GDVLEP
Sbjct: 61 LFELFETKLKKFNGDLTRAAVDLAKEWRIDRNLRRLEAMMLASDGSKIFLISGTGDVLEP 120
Query: 131 ENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E + IGSGGSYA +AARA + T +SAEEIARK++ IAA IC+YTN +I +E L
Sbjct: 121 EYDAIGIGSGGSYAYAAARAYLDSDTSSSAEEIARKSLEIAAHICIYTNTSINVEVL 177
>gi|52424326|ref|YP_087463.1| ATP-dependent protease peptidase subunit [Mannheimia
succiniciproducens MBEL55E]
gi|85542205|sp|Q65VY2|HSLV_MANSM RecName: Full=ATP-dependent protease subunit HslV
gi|52306378|gb|AAU36878.1| HslV protein [Mannheimia succiniciproducens MBEL55E]
Length = 173
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRK+G V I GDGQ +LG V K RKVRRL K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKNGKVAIGGDGQATLGNCVEKGTVRKVRRLYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++++VELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLVKAAVELAKEWRTERSLRRLEAMMIVANESEFLLVSGSGDVIEPEFDVL 121
Query: 136 AIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLE 183
AIGSGG++A SAA AL+ T N SA EI ++A+ IA DI +YTNHN V+E
Sbjct: 122 AIGSGGNFAKSAALALLRTNNELSAAEIVKQALIIAGDIDIYTNHNHVIE 171
>gi|289548229|ref|YP_003473217.1| 20S proteasome A and subunit betas [Thermocrinis albus DSM 14484]
gi|289181846|gb|ADC89090.1| 20S proteasome A and B subunits [Thermocrinis albus DSM 14484]
Length = 172
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 126/171 (73%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TT+L VR++G V+ GDGQV+LG +V+K ARK+RRL +++ GFAGS+AD L+ERL
Sbjct: 2 TTVLVVRRNGRTVMGGDGQVTLGSSVVKHGARKIRRLYHDSVLVGFAGSAADGLALMERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE++ L+R+ VELAK+WR D+YLR LEA +L+AD+ +++G GD+LEP+ +M
Sbjct: 62 ESKLEEFRGSLVRACVELAKEWRTDRYLRRLEAFLLVADREHIFLLSGGGDLLEPDEPIM 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG A ++A AL T SAEEI +++ IA+ +C+YTN V+E+L
Sbjct: 122 AIGSGGDVARASAMALYRHTSLSAEEIVLESLKIASQVCIYTNDRFVIESL 172
>gi|15594641|ref|NP_212430.1| ATP-dependent protease peptidase subunit [Borrelia burgdorferi B31]
gi|195941350|ref|ZP_03086732.1| ATP-dependent protease peptidase subunit [Borrelia burgdorferi 80a]
gi|216264430|ref|ZP_03436422.1| ATP-dependent protease HslV [Borrelia burgdorferi 156a]
gi|218249363|ref|YP_002374819.1| ATP-dependent protease HslV [Borrelia burgdorferi ZS7]
gi|221217712|ref|ZP_03589180.1| ATP-dependent protease HslV [Borrelia burgdorferi 72a]
gi|223888893|ref|ZP_03623484.1| ATP-dependent protease HslV [Borrelia burgdorferi 64b]
gi|224533183|ref|ZP_03673783.1| ATP-dependent protease HslV [Borrelia burgdorferi WI91-23]
gi|225549025|ref|ZP_03770000.1| ATP-dependent protease HslV [Borrelia burgdorferi 94a]
gi|225550114|ref|ZP_03771074.1| ATP-dependent protease HslV [Borrelia burgdorferi 118a]
gi|225552106|ref|ZP_03773046.1| ATP-dependent protease HslV [Borrelia sp. SV1]
gi|226320597|ref|ZP_03796157.1| ATP-dependent protease HslV [Borrelia burgdorferi 29805]
gi|226321614|ref|ZP_03797140.1| ATP-dependent protease HslV [Borrelia burgdorferi Bol26]
gi|3913882|sp|Q57209|HSLV_BORBU RecName: Full=ATP-dependent protease subunit HslV
gi|226704537|sp|B7J1M4|HSLV_BORBZ RecName: Full=ATP-dependent protease subunit HslV
gi|1165280|gb|AAA85619.1| HsLV [Borrelia burgdorferi]
gi|1196313|gb|AAB51405.1| heat shock response protein [Borrelia burgdorferi]
gi|1234879|emb|CAA65467.1| heat shock protein [Borrelia burgdorferi]
gi|2688170|gb|AAC66652.1| heat shock protein (hslV) [Borrelia burgdorferi B31]
gi|215980903|gb|EEC21710.1| ATP-dependent protease HslV [Borrelia burgdorferi 156a]
gi|218164551|gb|ACK74612.1| ATP-dependent protease HslV [Borrelia burgdorferi ZS7]
gi|221192389|gb|EEE18608.1| ATP-dependent protease HslV [Borrelia burgdorferi 72a]
gi|223885709|gb|EEF56808.1| ATP-dependent protease HslV [Borrelia burgdorferi 64b]
gi|224511910|gb|EEF82311.1| ATP-dependent protease HslV [Borrelia burgdorferi WI91-23]
gi|225369226|gb|EEG98679.1| ATP-dependent protease HslV [Borrelia burgdorferi 118a]
gi|225370251|gb|EEG99689.1| ATP-dependent protease HslV [Borrelia burgdorferi 94a]
gi|225371104|gb|EEH00534.1| ATP-dependent protease HslV [Borrelia sp. SV1]
gi|226232803|gb|EEH31556.1| ATP-dependent protease HslV [Borrelia burgdorferi Bol26]
gi|226234016|gb|EEH32737.1| ATP-dependent protease HslV [Borrelia burgdorferi 29805]
gi|312148445|gb|ADQ31104.1| ATP-dependent protease HslV [Borrelia burgdorferi JD1]
gi|312148992|gb|ADQ29063.1| ATP-dependent protease HslV [Borrelia burgdorferi N40]
Length = 182
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 131/178 (73%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA TL
Sbjct: 3 FKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAITLF 62
Query: 73 ERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV+E
Sbjct: 63 EKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSNNILLISGTGDVVE 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
PE V++IGSGG+YA SAA A M + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 123 PEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180
>gi|295111499|emb|CBL28249.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Synergistetes bacterium SGP1]
Length = 180
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 126/171 (73%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VR V +AGDGQV+LG ++K+ ARKVR L G I+ GFAGS+ADA TLLER
Sbjct: 8 TTIVCVRDGARVAMAGDGQVTLGSQIIKSGARKVRPLLGGKILTGFAGSTADAMTLLERF 67
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E LEQ L++ +V+L ++WRMDK LR LEAM+L AD+++TL+++G GD+LEPE V
Sbjct: 68 ENCLEQEKGDLMKGAVKLVREWRMDKALRRLEAMMLAADRSMTLLLSGAGDILEPEGDVA 127
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+IGSG YAL+A RAL +T S + IAR+A+ +A++IC+YT+ + LE L
Sbjct: 128 SIGSGSGYALAAGRALREATDWSPDRIARRAIELASEICIYTDSVVTLEVL 178
>gi|203284217|ref|YP_002221957.1| hypothetical protein BDU_299 [Borrelia duttonii Ly]
gi|238690558|sp|B5RLC2|HSLV_BORDL RecName: Full=ATP-dependent protease subunit HslV
gi|201083660|gb|ACH93251.1| hslV gene product [Borrelia duttonii Ly]
Length = 180
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 129/177 (72%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT++ +R+ G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA TL
Sbjct: 3 FKGTTVIAIRRAGKTVVAADGQVTFGYTVLKSNAVKIRKLVNGKILAGFAGSTSDAITLF 62
Query: 73 ERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
E+ E+K++ + ++ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV+E
Sbjct: 63 EKFEEKVKSREDGIIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSDNILLISGTGDVVE 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
PE V++IGSGG+YA SAA A M + SA +IA KA+ IAA +C+YTN NIVLE +
Sbjct: 123 PEEDVISIGSGGNYAYSAALAYMENKKLSAADIAFKALKIAARVCIYTNSNIVLEEI 179
>gi|153005548|ref|YP_001379873.1| ATP-dependent protease peptidase subunit [Anaeromyxobacter sp.
Fw109-5]
gi|189043928|sp|A7HDU3|HSLV_ANADF RecName: Full=ATP-dependent protease subunit HslV
gi|152029121|gb|ABS26889.1| 20S proteasome A and B subunits [Anaeromyxobacter sp. Fw109-5]
Length = 181
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 134/179 (74%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
H TT+L VR+DG VV+A DGQV+L +TVMK+ ARKVRRL +G ++AGFAG++ADAF L
Sbjct: 3 PFHGTTVLCVRRDGKVVMASDGQVTLDKTVMKSTARKVRRLAEGAVLAGFAGATADAFQL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E EKKL+++ L R++VELAK WR D+ LR LEAM+++AD+ LV++G GDV+EP+
Sbjct: 63 FELFEKKLKEHARSLPRAAVELAKQWRTDRMLRRLEAMLVVADREHILVLSGAGDVIEPD 122
Query: 132 ----NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV+AIGSG YA++AARAL+ + A ++A +AM +AA+IC+YTN N+ E L
Sbjct: 123 PVPGGGVVAIGSGAPYAVAAARALLGHSALPARQVAEEAMKLAAEICIYTNANLTFEEL 181
>gi|203287756|ref|YP_002222771.1| heat shock protein [Borrelia recurrentis A1]
gi|238690589|sp|B5RRB6|HSLV_BORRA RecName: Full=ATP-dependent protease subunit HslV
gi|201084976|gb|ACH94550.1| heat shock protein [Borrelia recurrentis A1]
Length = 180
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 129/177 (72%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT++ +R+ G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA TL
Sbjct: 3 FKGTTVIAIRRAGKTVVAADGQVTFGYTVLKSNAVKIRKLVNGKILAGFAGSTSDAITLF 62
Query: 73 ERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
E+ E+K++ + ++ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV+E
Sbjct: 63 EKFEEKVKSREDGIIDIKRAAVDLAKDWRADKILHKLEAMMLVADSDNILLISGTGDVVE 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
PE V++IGSGG+YA SAA A M + SA +IA KA+ IAA +C+YTN NIVLE +
Sbjct: 123 PEEDVISIGSGGNYAYSAALAYMENKKLSAADIAFKALKIAARVCIYTNSNIVLEEI 179
>gi|119953095|ref|YP_945304.1| ATP-dependent protease peptidase subunit [Borrelia turicatae
91E135]
gi|254802400|sp|A1QZ92|HSLV_BORT9 RecName: Full=ATP-dependent protease subunit HslV
gi|119861866|gb|AAX17634.1| ATP-dependent protease HslV [Borrelia turicatae 91E135]
Length = 180
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 129/177 (72%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT++ +R+ G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA TL
Sbjct: 3 FKGTTVIAIRRGGKTVVAADGQVTFGYTVLKSNAIKIRKLFNGKILAGFAGSTSDAITLF 62
Query: 73 ERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
E+ E+K++ + ++ R++VELAKDWR DK L LEAM+L+AD L+I+G GDV+E
Sbjct: 63 EKFEEKVKAREDGIIDIKRAAVELAKDWRSDKILHKLEAMMLVADSENILLISGTGDVVE 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
PE V++IGSGG+YA SAA A M + SA +IA K++ +AA +C+YTN NIVLE +
Sbjct: 123 PEEDVISIGSGGNYAYSAALAYMENKKLSAADIAFKSLKVAARVCIYTNSNIVLEEI 179
>gi|57167684|ref|ZP_00366824.1| heat shock protein [Campylobacter coli RM2228]
gi|283956077|ref|ZP_06373564.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 1336]
gi|305433191|ref|ZP_07402347.1| ATP-dependent protease HslVU [Campylobacter coli JV20]
gi|57020806|gb|EAL57470.1| heat shock protein [Campylobacter coli RM2228]
gi|283792397|gb|EFC31179.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 1336]
gi|304443892|gb|EFM36549.1| ATP-dependent protease HslVU [Campylobacter coli JV20]
Length = 180
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 125/180 (69%), Gaps = 4/180 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L+ LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
G + AIGSGG+YALSAARAL N EE+ + ++ IA +IC+YTN NI +T + DE
Sbjct: 122 GQIAAIGSGGNYALSAARALAKHANLDEEELVKSSLQIAGEICIYTNTNI--KTYVIEDE 179
>gi|124268573|ref|YP_001022577.1| ATP-dependent protease peptidase subunit [Methylibium
petroleiphilum PM1]
gi|166222986|sp|A2SLA3|HSLV_METPP RecName: Full=ATP-dependent protease subunit HslV
gi|124261348|gb|ABM96342.1| putative heat shock protein [Methylibium petroleiphilum PM1]
Length = 185
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 126/173 (72%), Gaps = 1/173 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL+VR+ V + GDGQV+LG V+KA+ARKVRRL K ++AGFAG++ADAFTL E
Sbjct: 5 HGTTILSVRRGREVALGGDGQVTLGSIVVKASARKVRRLYKEQVLAGFAGATADAFTLFE 64
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
R E KLE++ L+R++++L +DWR D+ LR LEAM+ +AD+ +L+ITG GDVLEPE+G
Sbjct: 65 RFEGKLEKHQGNLVRAAIDLTRDWRTDRVLRRLEAMLAVADRDTSLIITGNGDVLEPEHG 124
Query: 134 VMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++AIGSGG +A L T E+ +K++ IA D+C+YTN + +E L
Sbjct: 125 IVAIGSGGAYAQAAARALLAHTTLGPAEMVKKSLEIAGDLCIYTNQHHTIEVL 177
>gi|219684503|ref|ZP_03539446.1| ATP-dependent protease HslV [Borrelia garinii PBr]
gi|219685618|ref|ZP_03540433.1| ATP-dependent protease HslV [Borrelia garinii Far04]
gi|219671865|gb|EED28919.1| ATP-dependent protease HslV [Borrelia garinii PBr]
gi|219672806|gb|EED29830.1| ATP-dependent protease HslV [Borrelia garinii Far04]
Length = 182
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 131/178 (73%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA TL
Sbjct: 3 FKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAITLF 62
Query: 73 ERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV+E
Sbjct: 63 EKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSKNILLISGTGDVVE 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
PE V++IGSGG+YA SAA A M + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 123 PEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180
>gi|297584029|ref|YP_003699809.1| 20S proteasome subunit AB [Bacillus selenitireducens MLS10]
gi|297142486|gb|ADH99243.1| 20S proteasome A and B subunits [Bacillus selenitireducens MLS10]
Length = 181
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 129/178 (72%), Gaps = 3/178 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
++ TTI +R +G I GDGQV++GQ V MK +A KVRRL +G +I GFAGS ADAF+
Sbjct: 3 EIRGTTIFAIRHNGQAAICGDGQVTVGQAVVMKQSAVKVRRLYRGRVITGFAGSVADAFS 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KLE+Y L R++VELAK+WR D+ LR LEAM+++ DK VI G G+V+EP
Sbjct: 63 LYEKFEGKLEEYNGHLQRAAVELAKEWRGDRVLRKLEAMLIVMDKDSLYVIAGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
++G+ AIGSGG+YAL+A RA+ + +AEEIA++++ AA +CVYTN ++ E ++
Sbjct: 123 DDGITAIGSGGNYALAAGRAMKKHAPHLTAEEIAKESLLTAASMCVYTNDHLTTEVIE 180
>gi|145568945|gb|ABP78051.1| heat shock protein HslV [Pseudomonas stutzeri A1501]
Length = 172
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 130/168 (77%), Gaps = 3/168 (1%)
Query: 21 VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
+R++G VV+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER E +LE
Sbjct: 1 MRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERFEGQLE 60
Query: 81 QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSG 140
++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV++PE+ ++A+GSG
Sbjct: 61 KHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVQPEDDLIAMGSG 120
Query: 141 GSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
G +A +AA+AL+ SA+EIA A++IA ICV+TN N+ +E L
Sbjct: 121 GGFAQAAAKALLLKAGADMSAQEIAETALNIAGSICVFTNQNLTIEEL 168
>gi|222823761|ref|YP_002575335.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Campylobacter lari RM2100]
gi|254802408|sp|B9KG99|HSLV_CAMLR RecName: Full=ATP-dependent protease subunit HslV
gi|222538983|gb|ACM64084.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Campylobacter lari RM2100]
Length = 180
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 121/170 (71%), Gaps = 2/170 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKNNAVKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ EK L LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFEKLLSSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADICVYTNHNI 180
G + AIGSGG+YALSAARAL N EE + ++++ IA +IC+YTN NI
Sbjct: 122 GAIAAIGSGGNYALSAARALAKHSNLDEENLVKESLQIAGEICIYTNTNI 171
>gi|153952111|ref|YP_001398381.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
subsp. doylei 269.97]
gi|166221635|sp|A7H4F1|HSLV_CAMJD RecName: Full=ATP-dependent protease subunit HslV
gi|152939557|gb|ABS44298.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. doylei 269.97]
Length = 180
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 125/180 (69%), Gaps = 4/180 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAIKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L+ LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
G + AIGSGG+YALSAARAL N EE+ + ++ IA +IC+YTN NI +T + DE
Sbjct: 122 GQIAAIGSGGNYALSAARALAKHANLDEEELVKSSLQIAGEICIYTNTNI--KTYVIEDE 179
>gi|255961281|ref|YP_346130.3| ATP-dependent protease peptidase subunit [Pseudomonas fluorescens
Pf0-1]
gi|77380628|gb|ABA72141.1| ATP-dependent protease hslV [Pseudomonas fluorescens Pf0-1]
Length = 192
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 132/169 (78%), Gaps = 1/169 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 18 TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 77
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 78 EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 137
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLE 183
A+GSGG+YA +AA AL+ T SA EI A+ IA DICV+TNH +E
Sbjct: 138 AMGSGGAYAQAAASALLKKTDLSAREIVETALGIAGDICVFTNHTQTIE 186
>gi|224534196|ref|ZP_03674774.1| ATP-dependent protease HslV [Borrelia spielmanii A14S]
gi|224514298|gb|EEF84614.1| ATP-dependent protease HslV [Borrelia spielmanii A14S]
Length = 182
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 131/178 (73%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA TL
Sbjct: 3 FKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAITLF 62
Query: 73 ERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV+E
Sbjct: 63 EKFEEKIKAKGDGLVDIKRAAVDLAKDWRSDKILHKLEAMMLVADSKNILLISGTGDVVE 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
PE V++IGSGG+YA SAA A M + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 123 PEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180
>gi|59712884|ref|YP_205660.1| ATP-dependent protease peptidase subunit [Vibrio fischeri ES114]
gi|59480985|gb|AAW86772.1| peptidase component of the HslUV protease [Vibrio fischeri ES114]
Length = 193
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 127/171 (74%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+AGDGQ S G + K N +KVRRL +++ GFAGS+ADAF L +
Sbjct: 21 TTIVSVRREGKVVVAGDGQASQGDMIAKGNVKKVRRLYNDSVLVGFAGSTADAFILFDLC 80
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAK+WR D+ LR LEAM+++ADKT +L+I+G GD++ +N ++
Sbjct: 81 ERKLEMHQGNLTKAAVELAKEWRSDRALRRLEAMLIVADKTTSLIISGTGDLINADNDLL 140
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
IGSGG +A SAA AL+ +T A EIA KA++IA DI VYTNHN +E L
Sbjct: 141 TIGSGGYFARSAATALLENTDLDAREIATKALTIAGDIDVYTNHNHTVEEL 191
>gi|197335089|ref|YP_002157072.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Vibrio fischeri MJ11]
gi|238065951|sp|B5FBL7|HSLV_VIBFM RecName: Full=ATP-dependent protease subunit HslV
gi|197316579|gb|ACH66026.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Vibrio fischeri MJ11]
Length = 174
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 127/171 (74%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+AGDGQ S G + K N +KVRRL +++ GFAGS+ADAF L +
Sbjct: 2 TTIVSVRREGKVVVAGDGQASQGDMIAKGNVKKVRRLYNDSVLVGFAGSTADAFILFDLC 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAK+WR D+ LR LEAM+++ADKT +L+I+G GD++ +N ++
Sbjct: 62 ERKLEMHQGNLTKAAVELAKEWRSDRALRRLEAMLIVADKTTSLIISGTGDLINADNDLL 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
IGSGG +A SAA AL+ +T A EIA KA++IA DI VYTNHN +E L
Sbjct: 122 TIGSGGYFARSAATALLENTDLDAREIATKALTIAGDIDVYTNHNHTVEEL 172
>gi|70733941|ref|YP_257581.1| ATP-dependent protease peptidase subunit [Pseudomonas fluorescens
Pf-5]
gi|123658507|sp|Q4KJK2|HSLV_PSEF5 RecName: Full=ATP-dependent protease subunit HslV
gi|68348240|gb|AAY95846.1| heat shock protein HslV [Pseudomonas fluorescens Pf-5]
Length = 176
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 132/169 (78%), Gaps = 1/169 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLE 183
A+GSGG+YA +AA AL+ T SA EI A+ IA DICV+TNH +E
Sbjct: 122 AMGSGGAYAQAAASALLKKTDLSAREIVETALGIAGDICVFTNHTQTIE 170
>gi|226227911|ref|YP_002762017.1| ATP-dependent protease HslV [Gemmatimonas aurantiaca T-27]
gi|259491388|sp|C1ABE1|HSLV_GEMAT RecName: Full=ATP-dependent protease subunit HslV
gi|226091102|dbj|BAH39547.1| ATP-dependent protease HslV [Gemmatimonas aurantiaca T-27]
Length = 181
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ ATTIL VR++G V I GDGQVS+G TV K A KVR L G ++AGFAGS ADA TL
Sbjct: 5 QVRATTILAVRRNGQVAIGGDGQVSVGDTVAKQRAVKVRTLKGGRVLAGFAGSVADALTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLE+YP L R+SVELAK+WR D+ LR LEAM+++AD +++G G+++EP+
Sbjct: 65 FEKFEEKLERYPGNLPRASVELAKEWRSDRVLRRLEAMLIVADVEHGFMLSGNGELIEPD 124
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNI-VLETLK 186
+G++AIGSGG+YA +AARALM TQ +I KA++IA +IC+YTN NI VLE +
Sbjct: 125 DGILAIGSGGAYAQAAARALMRETQLPPRDIVEKALTIAGEICIYTNTNITVLEPTR 181
>gi|216264062|ref|ZP_03436056.1| ATP-dependent protease HslV [Borrelia afzelii ACA-1]
gi|215980106|gb|EEC20928.1| ATP-dependent protease HslV [Borrelia afzelii ACA-1]
Length = 182
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 131/178 (73%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA TL
Sbjct: 3 FKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAITLF 62
Query: 73 ERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV+E
Sbjct: 63 EKFEEKIKAKGDGLVDIKRAAVDLAKDWRSDKVLHKLEAMMLVADSKNILLISGTGDVVE 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
PE V++IGSGG+YA SAA A M + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 123 PEEDVVSIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180
>gi|172057894|ref|YP_001814354.1| ATP-dependent protease peptidase subunit [Exiguobacterium sibiricum
255-15]
gi|171990415|gb|ACB61337.1| 20S proteasome A and B subunits [Exiguobacterium sibiricum 255-15]
Length = 183
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 132/176 (75%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI ++ +G ++GDGQV+ G Q +MK +A+KVRRL G +IAGFAGS ADAFTL
Sbjct: 2 FHATTIFAIQHNGQSAMSGDGQVTFGNQVIMKKSAKKVRRLYGGKVIAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE Y L R++VELAK+WR DK LR LEA++L+ D T L+++G G+V+EP+
Sbjct: 62 FEKFEAKLEMYNGNLQRAAVELAKEWRGDKMLRQLEALLLVMDGTHLLLVSGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YAL+A RAL + +AE+IAR A+ A ++CV+TN I+LET+
Sbjct: 122 DGILAIGSGGNYALAAGRALARHAGHMTAEQIARAALETAGELCVFTNDQIILETI 177
>gi|111115121|ref|YP_709739.1| ATP-dependent protease peptidase subunit [Borrelia afzelii PKo]
gi|122956394|sp|Q0SNL5|HSLV_BORAP RecName: Full=ATP-dependent protease subunit HslV
gi|110890395|gb|ABH01563.1| heat shock protein [Borrelia afzelii PKo]
Length = 182
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 131/178 (73%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA TL
Sbjct: 3 FKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAITLF 62
Query: 73 ERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV+E
Sbjct: 63 EKFEEKIKAKGDGLVDIKRAAVDLAKDWRSDKILHKLEAMMLVADSKNILLISGTGDVVE 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
PE V++IGSGG+YA SAA A M + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 123 PEEDVVSIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180
>gi|330807098|ref|YP_004351560.1| ATP-dependent protease, peptidase subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327375206|gb|AEA66556.1| ATP-dependent protease, peptidase subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 176
Score = 184 bits (468), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 132/169 (78%), Gaps = 1/169 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLE 183
A+GSGG+YA +AA AL+ T SA EI A+ IA DICV+TNH +E
Sbjct: 122 AMGSGGAYAQAAASALLKKTDLSAREIVETALGIAGDICVFTNHTQTIE 170
>gi|218778263|ref|YP_002429581.1| ATP-dependent protease peptidase subunit [Desulfatibacillum
alkenivorans AK-01]
gi|218759647|gb|ACL02113.1| 20S proteasome A and B subunits [Desulfatibacillum alkenivorans
AK-01]
Length = 180
Score = 184 bits (468), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 121/176 (68%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TTIL VRKDG IAGDGQV+LG TV+K A+KVR++ I+ GFAG++ADA
Sbjct: 5 LDFRGTTILAVRKDGKTAIAGDGQVTLGNTVVKHTAQKVRKIYHDKIVVGFAGATADALN 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ++ E KLEQY L R++VELA+DWR DKYLR LEAM++ D +I+G GD++EP
Sbjct: 65 LFDKFEGKLEQYNGNLTRAAVELARDWRTDKYLRKLEAMMIAVDDQRMFLISGNGDIIEP 124
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
+ GV+ IGSGG++A +AA L+ + A IA+ AM +AA IC+YTN + L +
Sbjct: 125 DEGVIGIGSGGAFAQAAATGLIRHSDLDASAIAKAAMDVAASICIYTNQVVTLHEI 180
>gi|221633580|ref|YP_002522806.1| ATP-dependent protease peptidase subunit [Thermomicrobium roseum
DSM 5159]
gi|221156008|gb|ACM05135.1| heat shock protein HslV [Thermomicrobium roseum DSM 5159]
Length = 197
Score = 184 bits (468), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 122/172 (70%), Gaps = 1/172 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL V +DG V IAGDGQV+ G V+K ARK+R L G ++AGFAG+ ADA TL E
Sbjct: 8 HGTTILGVLRDGRVAIAGDGQVTAGDVVLKHRARKIRALAGGKVLAGFAGAVADALTLFE 67
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
+ E+ L L R++VELAK+WR D+YLR LEA +L+AD L+I+G GDV+EP++G
Sbjct: 68 KFEQHLRTADGDLRRAAVELAKEWRSDRYLRRLEAQLLVADPRQLLMISGDGDVIEPDDG 127
Query: 134 VMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
V AIG+GG Y A +A L T+ SA EIAR AM +AAD+CVYTNH + + T
Sbjct: 128 VAAIGTGGPYAAAAARALLRHTRMSAAEIARAAMEVAADLCVYTNHAVTILT 179
>gi|255322167|ref|ZP_05363313.1| ATP-dependent protease HslV [Campylobacter showae RM3277]
gi|255300540|gb|EET79811.1| ATP-dependent protease HslV [Campylobacter showae RM3277]
Length = 177
Score = 184 bits (468), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 120/170 (70%), Gaps = 2/170 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R++ G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKIHGGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E LE LL++ +E +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFENNLEHAKGDLLKAVIEFSKEWRKDKYLRKLEAMMLVLDREKIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNI 180
G + AIGSGG+YALSAARAL Q EE+ ++++ IA +IC+YTN NI
Sbjct: 122 GKIAAIGSGGNYALSAARALDKFAQIDEEELVKESLKIAGEICIYTNTNI 171
>gi|289523580|ref|ZP_06440434.1| ATP-dependent protease HslVU, peptidase subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503272|gb|EFD24436.1| ATP-dependent protease HslVU, peptidase subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 178
Score = 184 bits (467), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 129/175 (73%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI+ VR+ V +AGDGQV+L ++K A+KVRRL GN++AGFAGS+ADA TLL
Sbjct: 2 FKGTTIICVRRGDEVAMAGDGQVTLEHQIIKNGAKKVRRLVGGNVLAGFAGSTADAMTLL 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E+ LE + L+R++V+L K+WR DK LR LEAM+L+AD TL+++G GDVLEP++
Sbjct: 62 ERFERYLEGHSGNLMRAAVDLVKEWRTDKALRRLEAMMLVADLRQTLLLSGAGDVLEPDS 121
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
V +IGSG +AL+AA+A + + A EIA++++ IA+++C+YTN I LE +K
Sbjct: 122 DVASIGSGSGFALAAAKAFIEVSDMGAGEIAKRSLQIASELCIYTNDIITLEVIK 176
>gi|258511366|ref|YP_003184800.1| ATP-dependent protease peptidase subunit [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478092|gb|ACV58411.1| 20S proteasome A and B subunits [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 181
Score = 184 bits (467), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 127/178 (71%), Gaps = 2/178 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+MH TTI + +DG +AGDGQV+ G + VMK +ARKVRRL ++AGFAGS ADAFT
Sbjct: 4 EMHGTTIFAMLRDGRGAMAGDGQVTFGNSMVMKHSARKVRRLYHDRVVAGFAGSVADAFT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ER EKKLE++ L R++VELAK WR DK L+ LEAM+++ D L+++G G+V++P
Sbjct: 64 LFERFEKKLEEFQGNLPRAAVELAKAWRSDKILQKLEAMLVVMDARDLLIVSGGGEVIQP 123
Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
++G+ AIGSGG Y + +TQ EIA++A+ IA++ICVYTN IVLET+ V
Sbjct: 124 DDGICAIGSGGGYALAAGRALARNTQLEPAEIAKQALIIASEICVYTNDQIVLETVGV 181
>gi|57242465|ref|ZP_00370403.1| heat shock protein [Campylobacter upsaliensis RM3195]
gi|57016750|gb|EAL53533.1| heat shock protein [Campylobacter upsaliensis RM3195]
Length = 181
Score = 184 bits (467), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 125/181 (69%), Gaps = 5/181 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVSLG T+MK NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSLGNTIMKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
+ E L+ LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDVLEPE
Sbjct: 62 DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRKHIFLLSGTGDVLEPED 121
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
N + AIGSGG+YALSAARAL + EE+ + ++ IA +ICVYTN NI +T + D
Sbjct: 122 NQIAAIGSGGNYALSAARALKKHALNLDEEELVKSSLQIAGEICVYTNTNI--KTYVIED 179
Query: 190 E 190
E
Sbjct: 180 E 180
>gi|57236973|ref|YP_178774.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
RM1221]
gi|86149885|ref|ZP_01068114.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni CF93-6]
gi|88596932|ref|ZP_01100168.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 84-25]
gi|148926639|ref|ZP_01810320.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205355513|ref|ZP_03222284.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|218562308|ref|YP_002344087.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|11133089|sp|Q9PHK9|HSLV_CAMJE RecName: Full=ATP-dependent protease subunit HslV
gi|81557530|sp|Q5HVB1|HSLV_CAMJR RecName: Full=ATP-dependent protease subunit HslV
gi|57165777|gb|AAW34556.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
RM1221]
gi|85839703|gb|EAQ56963.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni CF93-6]
gi|88190621|gb|EAQ94594.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 84-25]
gi|112360014|emb|CAL34804.1| ATP-dependent protease HslV [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|145845158|gb|EDK22253.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205346747|gb|EDZ33379.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|315058078|gb|ADT72407.1| ATP-dependent protease HslV [Campylobacter jejuni subsp. jejuni S3]
gi|315926780|gb|EFV06154.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315929327|gb|EFV08535.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni
305]
Length = 180
Score = 184 bits (467), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 125/180 (69%), Gaps = 4/180 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L+ LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
G + AIGSGG+YALSAARAL T EE+ + ++ IA +IC+YTN NI +T + DE
Sbjct: 122 GQIAAIGSGGNYALSAARALAKHTDLDEEELVKSSLQIAGEICIYTNTNI--KTYVIEDE 179
>gi|283953974|ref|ZP_06371503.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 414]
gi|283794579|gb|EFC33319.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 414]
Length = 180
Score = 184 bits (466), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 125/180 (69%), Gaps = 4/180 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L+ LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
G + AIGSGG+YALSAARAL T EE+ + ++ IA +IC+YTN NI +T + DE
Sbjct: 122 GKIAAIGSGGNYALSAARALAKHTDLDEEELVKSSLQIAGEICIYTNTNI--KTYVIEDE 179
>gi|187918170|ref|YP_001883733.1| ATP-dependent protease peptidase subunit [Borrelia hermsii DAH]
gi|238689285|sp|B2S007|HSLV_BORHD RecName: Full=ATP-dependent protease subunit HslV
gi|119861018|gb|AAX16813.1| ATP-dependent protease HslV [Borrelia hermsii DAH]
Length = 180
Score = 183 bits (465), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 128/177 (72%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT++ +R+ G +A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA TL
Sbjct: 3 FKGTTVIAIRRGGKTAVAADGQVTFGYTVLKSNAVKIRKLVNGRILAGFAGSTSDAITLF 62
Query: 73 ERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
E+ E+K++ + ++ R++VELAKDWR DK L LEAM+L+AD L+I+G GDV+E
Sbjct: 63 EKFEEKVKAREDGIIDIKRAAVELAKDWRSDKILHKLEAMMLVADSENILLISGTGDVVE 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
PE V++IGSGG+YA SAA A M + SA +IA K++ +AA +C+YTN NIVLE +
Sbjct: 123 PEEDVISIGSGGNYAYSAALAYMENKKLSAADIAFKSLKVAAKVCIYTNSNIVLEEI 179
>gi|51598556|ref|YP_072744.1| ATP-dependent protease peptidase subunit [Borrelia garinii PBi]
gi|85542198|sp|Q661W9|HSLV_BORGA RecName: Full=ATP-dependent protease subunit HslV
gi|51573127|gb|AAU07152.1| heat shock protein [Borrelia garinii PBi]
Length = 182
Score = 183 bits (465), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 130/178 (73%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT++ ++K+G V+A DGQV G TV+K+NA K+R+L G I+AGFAGS++DA TL
Sbjct: 3 FKGTTVIAIKKNGKTVVAADGQVLFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAITLF 62
Query: 73 ERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV+E
Sbjct: 63 EKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSKNILLISGTGDVVE 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
PE V++IGSGG+YA SAA A M + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 123 PEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180
>gi|312969316|ref|ZP_07783518.1| ATP-dependent protease hslV [Escherichia coli 2362-75]
gi|312285863|gb|EFR13781.1| ATP-dependent protease hslV [Escherichia coli 2362-75]
gi|313648819|gb|EFS13258.1| ATP-dependent protease hslV [Shigella flexneri 2a str. 2457T]
gi|323177953|gb|EFZ63537.1| ATP-dependent protease hslV [Escherichia coli 1180]
Length = 154
Score = 183 bits (465), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 88/150 (58%), Positives = 116/150 (77%), Gaps = 1/150 (0%)
Query: 37 LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD 96
+G TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L++++VELAKD
Sbjct: 1 MGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKD 60
Query: 97 WRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQ 155
WR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +AARAL+ +T+
Sbjct: 61 WRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTE 120
Query: 156 NSAEEIARKAMSIAADICVYTNHNIVLETL 185
SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 LSAREIAEKALDIAGDICIYTNHFHTIEEL 150
>gi|152990745|ref|YP_001356467.1| ATP-dependent protease peptidase subunit [Nitratiruptor sp.
SB155-2]
gi|166222987|sp|A6Q3Q1|HSLV_NITSB RecName: Full=ATP-dependent protease subunit HslV
gi|151422606|dbj|BAF70110.1| ATP-dependent protease HslVU, peptidase subunit HslV [Nitratiruptor
sp. SB155-2]
Length = 178
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 124/176 (70%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + DG+ VI GDGQV+ G TV+K NA K+R L G I+AGFAGS+ADAF L
Sbjct: 2 FEATTILGYKGDGIAVIGGDGQVTFGNTVLKGNATKIRTLYNGQILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ EK LE LL+S +E +K+WR D+YLR LEAM+++ + +++G GDV+EPE+
Sbjct: 62 DMFEKILENKKGDLLKSVIEFSKEWRKDRYLRRLEAMMIVLNTKHIFILSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + AIGSGG++ALSAARAL N A+ + +++ IA ++C+YTN NI L TL+
Sbjct: 122 GKIAAIGSGGNFALSAARALDKHANLDAKTLVEESLKIAGELCIYTNTNIKLLTLE 177
>gi|222530145|ref|YP_002574027.1| ATP-dependent protease peptidase subunit [Caldicellulosiruptor
bescii DSM 6725]
gi|254802327|sp|B9MM31|HSLV_ANATD RecName: Full=ATP-dependent protease subunit HslV
gi|222456992|gb|ACM61254.1| 20S proteasome A and B subunits [Caldicellulosiruptor bescii DSM
6725]
Length = 176
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 125/174 (71%), Gaps = 3/174 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ Q +MK+ A+KVR+L G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGKVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++ADK V++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKDHLFVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI-VLE 183
+ + AIGSGG Y +A L ST SA EIARKA+ IAA ICVYTN+NI VLE
Sbjct: 122 DNIAAIGSGGPYALAAARALLQSTDLSAAEIARKALEIAASICVYTNNNITVLE 175
>gi|189028458|sp|A1BGP1|HSLV_CHLPD RecName: Full=ATP-dependent protease subunit HslV
Length = 182
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 124/172 (72%), Gaps = 1/172 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ +TT+L V +DG + DGQ++LG TV+K + RK RRL G IIAGFAG++ADA TLL
Sbjct: 9 IRSTTVLGVIRDGKAALGSDGQMTLGNTVLKHSTRKTRRLYHGQIIAGFAGATADAVTLL 68
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+R E+KLE + +L R++VELA+DWR DKYLR LEAM+ I L+I+G GDV+EPE+
Sbjct: 69 DRFEEKLEAFSGRLERAAVELARDWRTDKYLRRLEAMLAIVTAEKALIISGTGDVIEPED 128
Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
G++AIGSG Y +A L T SA EI +++ IAADIC+YTN +IV+E
Sbjct: 129 GIVAIGSGSMYALAAARSLLAHTTLSAREIVHESLKIAADICIYTNDHIVIE 180
>gi|86151772|ref|ZP_01069986.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 260.94]
gi|86153408|ref|ZP_01071612.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121613396|ref|YP_001000363.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
subsp. jejuni 81-176]
gi|157414939|ref|YP_001482195.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
subsp. jejuni 81116]
gi|167005309|ref|ZP_02271067.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
81-176]
gi|315124172|ref|YP_004066176.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|166221636|sp|A1VZ22|HSLV_CAMJJ RecName: Full=ATP-dependent protease subunit HslV
gi|172047096|sp|A8FL81|HSLV_CAMJ8 RecName: Full=ATP-dependent protease subunit HslV
gi|85841401|gb|EAQ58649.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 260.94]
gi|85843134|gb|EAQ60345.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87249439|gb|EAQ72399.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 81-176]
gi|157385903|gb|ABV52218.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
81116]
gi|284925921|gb|ADC28273.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
subsp. jejuni IA3902]
gi|307747578|gb|ADN90848.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni M1]
gi|315017894|gb|ADT65987.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|315931860|gb|EFV10815.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni
327]
Length = 180
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 125/180 (69%), Gaps = 4/180 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L+ LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
G + AIGSGG+YALSAARAL + EE+ + ++ IA +IC+YTN NI +T + DE
Sbjct: 122 GQIAAIGSGGNYALSAARALAKHASLDEEELVKSSLQIAGEICIYTNTNI--KTYVIEDE 179
>gi|312621562|ref|YP_004023175.1| 20S proteasome subunits A and B [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202029|gb|ADQ45356.1| 20S proteasome A and B subunits [Caldicellulosiruptor
kronotskyensis 2002]
Length = 176
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 125/174 (71%), Gaps = 3/174 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ Q +MK+ A+KVR+L G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGKVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++ADK V++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKILRRLEALMVVADKDHLFVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI-VLE 183
+ + AIGSGG Y +A L ST SA EIARKA+ IAA ICVYTN+NI VLE
Sbjct: 122 DNIAAIGSGGPYALAAARALLQSTDLSAAEIARKALEIAASICVYTNNNITVLE 175
>gi|119357348|ref|YP_911992.1| ATP-dependent protease peptidase subunit [Chlorobium
phaeobacteroides DSM 266]
gi|119354697|gb|ABL65568.1| 20S proteasome, A and B subunits [Chlorobium phaeobacteroides DSM
266]
Length = 183
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 124/172 (72%), Gaps = 1/172 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ +TT+L V +DG + DGQ++LG TV+K + RK RRL G IIAGFAG++ADA TLL
Sbjct: 10 IRSTTVLGVIRDGKAALGSDGQMTLGNTVLKHSTRKTRRLYHGQIIAGFAGATADAVTLL 69
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+R E+KLE + +L R++VELA+DWR DKYLR LEAM+ I L+I+G GDV+EPE+
Sbjct: 70 DRFEEKLEAFSGRLERAAVELARDWRTDKYLRRLEAMLAIVTAEKALIISGTGDVIEPED 129
Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
G++AIGSG Y +A L T SA EI +++ IAADIC+YTN +IV+E
Sbjct: 130 GIVAIGSGSMYALAAARSLLAHTTLSAREIVHESLKIAADICIYTNDHIVIE 181
>gi|297569002|ref|YP_003690346.1| 20S proteasome A and B subunits [Desulfurivibrio alkaliphilus AHT2]
gi|296924917|gb|ADH85727.1| 20S proteasome A and B subunits [Desulfurivibrio alkaliphilus AHT2]
Length = 176
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+++ +TT++ VR +V +AGDGQV+LG V+K ARK+RRL G +I GFAG++ADAFT
Sbjct: 1 MQVRSTTVVAVRHREMVAMAGDGQVTLGNVVVKHQARKIRRLYHGRVITGFAGATADAFT 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ++LE++LEQY LLR++VELAK+WR D+ LR LEAM++ D +L+++G GDV+EP
Sbjct: 61 LFDKLEQQLEQYSGNLLRAAVELAKEWRTDRMLRRLEAMMVAVDAERSLLLSGNGDVIEP 120
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG YA +AA+AL++ A EI R AM IA +C+YTN +I LE L
Sbjct: 121 DDGILAIGSGGPYAHAAAKALVAHSGLDAPEICRAAMEIAGGLCIYTNDSIHLEVL 176
>gi|295696107|ref|YP_003589345.1| 20S proteasome A and B subunits [Bacillus tusciae DSM 2912]
gi|295411709|gb|ADG06201.1| 20S proteasome A and B subunits [Bacillus tusciae DSM 2912]
Length = 180
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 128/178 (71%), Gaps = 3/178 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
++H TTI + G V+AGDGQV++G TVMK A+KVRRL +G ++AGFAGS ADA
Sbjct: 3 QLHGTTIFAILDRGHAVMAGDGQVTMGNATVMKHGAKKVRRLYQGRVLAGFAGSVADALA 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ER E LE + L R++V++AK+WR D+ LR LEAM+++ D+ L+++G G+V+EP
Sbjct: 63 LFERFEASLESHSGNLPRAAVDVAKEWRTDRVLRRLEAMLVVCDREHLLLLSGSGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
++G++A+GSGG YAL+A RAL + S EIA +AM IA++ICVYTN V+E L+
Sbjct: 123 DDGILAVGSGGVYALAAGRALKRHAAGLSPREIALEAMRIASEICVYTNDRFVVEELE 180
>gi|255080038|ref|XP_002503599.1| predicted protein [Micromonas sp. RCC299]
gi|226518866|gb|ACO64857.1| predicted protein [Micromonas sp. RCC299]
Length = 180
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 123/160 (76%), Gaps = 2/160 (1%)
Query: 32 DGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSV 91
DGQV+LG V+K N +KVRRL +G ++ GFAG++ADAFTL ERLE KLE++P QL R++V
Sbjct: 3 DGQVTLGSQVIKPNVKKVRRL-QGGVVGGFAGATADAFTLFERLEMKLEEHPGQLTRAAV 61
Query: 92 ELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARAL 151
ELAK WR DKYLR LEA +++ADK T ITG GDV+EP +GV+ IGSGG YA +AARAL
Sbjct: 62 ELAKAWRNDKYLRRLEATMVVADKHHTFQITGGGDVIEPHDGVIGIGSGGPYATAAARAL 121
Query: 152 MSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
+ A IA+KAM+IAAD CVYTNHN ++E++ DE
Sbjct: 122 VDIDGMDAMAIAKKAMNIAADTCVYTNHNFIIESIGPNDE 161
>gi|149194253|ref|ZP_01871350.1| ATP-dependent protease peptidase subunit [Caminibacter
mediatlanticus TB-2]
gi|149135428|gb|EDM23907.1| ATP-dependent protease peptidase subunit [Caminibacter
mediatlanticus TB-2]
Length = 182
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 128/183 (69%), Gaps = 4/183 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ + ATTIL +KDGV VI GDGQV+ G V+K NA+KVR L G I+AGFAGS+ADAF
Sbjct: 2 GINLEATTILGYKKDGVAVIGGDGQVTFGNAVLKGNAKKVRTLYNGKILAGFAGSTADAF 61
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L + E L+ LL++ ++ AK+WR DKYLR LEAM+++ + +++G GDV+E
Sbjct: 62 ILFDMFENHLQNRKGDLLKAVIDFAKEWRQDKYLRRLEAMMIVLNTKHIFILSGSGDVVE 121
Query: 130 PENGVM-AIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKV 187
PE+G + AIGSGG++A+SAARAL N E + ++++ IA ++C+YTN NI L LK+
Sbjct: 122 PEDGKLAAIGSGGNFAISAARALDRHANLDPESLVKESLQIAGELCIYTNTNITL--LKL 179
Query: 188 GDE 190
D+
Sbjct: 180 EDK 182
>gi|224369850|ref|YP_002604014.1| ATP-dependent protease peptidase subunit [Desulfobacterium
autotrophicum HRM2]
gi|223692567|gb|ACN15850.1| HslV [Desulfobacterium autotrophicum HRM2]
Length = 180
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 128/175 (73%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL VR VV+AGDGQV+LG V K A+KVRR+ II GFAG++ADA TL
Sbjct: 5 FHGTTILAVRHKNWVVVAGDGQVTLGTIVTKHKAKKVRRIYNDKIITGFAGATADALTLS 64
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+LE+KLEQY L RS+VELA++WR DKYLR LEAM++ AD+ T +++G GDV+EP++
Sbjct: 65 EKLEQKLEQYNGNLTRSAVELAREWRTDKYLRRLEAMMIAADEKNTYLLSGNGDVIEPDD 124
Query: 133 GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
GV++IGSG + A +AA+AL + T A I +AM IAA +C+YTN+ I +E +K
Sbjct: 125 GVISIGSGSTAAQAAAQALVVHTDLDARTIVTEAMKIAAALCIYTNNYITIEEMK 179
>gi|107104153|ref|ZP_01368071.1| hypothetical protein PaerPA_01005226 [Pseudomonas aeruginosa PACS2]
Length = 163
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/159 (56%), Positives = 125/159 (78%), Gaps = 2/159 (1%)
Query: 29 IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER E++LE++ L+R
Sbjct: 1 MGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERFEQQLEKHQGHLVR 60
Query: 89 SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA 148
++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++A+GSGG +A +AA
Sbjct: 61 AAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLIAMGSGGGFAQAAA 120
Query: 149 RALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AL+ + + SA E+A A++IA ICV+TN N+ +E L
Sbjct: 121 LALLQHNAELSAREVAETALNIAGSICVFTNQNLTIEEL 159
>gi|317121810|ref|YP_004101813.1| ATP dependent peptidase CodWX, CodW component [Thermaerobacter
marianensis DSM 12885]
gi|315591790|gb|ADU51086.1| ATP dependent peptidase CodWX, CodW component [Thermaerobacter
marianensis DSM 12885]
Length = 182
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/177 (55%), Positives = 134/177 (75%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
V+ H TT+L VR+DG V +AGDGQV++ Q VMK ARKVRRL G ++AGFAGS ADA
Sbjct: 6 VRFHGTTVLAVRRDGKVAMAGDGQVTMEQHMVMKHRARKVRRLYHGRVLAGFAGSVADAV 65
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L+ER E KLE++ QL+R++VELAKDWR D+ LR LEA++++AD L+++G G+VLE
Sbjct: 66 ALMERFEAKLEEHAGQLVRAAVELAKDWRTDRLLRRLEAVMVVADADHVLLVSGSGEVLE 125
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++A+GSG +AL+AARAL N A I R+AM IAA++CVYTN +++E L
Sbjct: 126 PDDGIVAVGSGAGFALAAARALARHTNLDAAAICREAMRIAAELCVYTNDQLIVEEL 182
>gi|167630282|ref|YP_001680781.1| ATP-dependent protease hslv [Heliobacterium modesticaldum Ice1]
gi|167593022|gb|ABZ84770.1| ATP-dependent protease hslv [Heliobacterium modesticaldum Ice1]
Length = 186
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 138/178 (77%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+KM TTI+ V++ V +AGDGQ++ G +T+MKA A+KVRRL +G +IAG AGS ADA
Sbjct: 4 MKMMGTTIVAVKRGTQVAVAGDGQITFGDRTIMKATAKKVRRLYQGKVIAGIAGSVADAL 63
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TLL++LE K++++ LLR+SV+LAK+WR D++LR LEAMI+ AD LVI+G G+V+E
Sbjct: 64 TLLDKLENKIQEFRGNLLRASVDLAKEWRTDRFLRRLEAMIIAADADHLLVISGNGEVIE 123
Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAE-EIARKAMSIAADICVYTNHNIVLETLK 186
P++GV+AIGSGG YAL+AARAL + A EIAR+A+ +A++ICV+TN I LE ++
Sbjct: 124 PDDGVVAIGSGGPYALAAARALARHSDLAPGEIARQALVVASEICVFTNDRITLEEIE 181
>gi|225181364|ref|ZP_03734808.1| 20S proteasome A and B subunits [Dethiobacter alkaliphilus AHT 1]
gi|225167945|gb|EEG76752.1| 20S proteasome A and B subunits [Dethiobacter alkaliphilus AHT 1]
Length = 176
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 126/175 (72%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
H TTI+ V K+G +AGDGQV+ G TVMK A KVR + +G ++AGFAGS ADA TL
Sbjct: 2 FHGTTIVAVLKNGRCALAGDGQVTFGGNTVMKHQAIKVRPIYQGKVLAGFAGSVADAVTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E++LE+Y L R++VELAK+WRMD+ LR LEA++L+AD LVI+G G+++EP+
Sbjct: 62 FEKYEEQLEKYQGNLRRAAVELAKEWRMDRVLRRLEALLLVADTESLLVISGNGELIEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+GV AIGSGG Y +A T A E+AR+A+ IA +ICVYTN +IVLETL
Sbjct: 122 DGVTAIGSGGPYALAAARALHRHTDLDAGEVARQALLIAGEICVYTNDSIVLETL 176
>gi|218288288|ref|ZP_03492587.1| 20S proteasome A and B subunits [Alicyclobacillus acidocaldarius
LAA1]
gi|218241647|gb|EED08820.1| 20S proteasome A and B subunits [Alicyclobacillus acidocaldarius
LAA1]
Length = 181
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 126/178 (70%), Gaps = 2/178 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+MH TTI + +DG +AGDGQV+ G VMK ARKVRRL ++AGFAGS ADAFT
Sbjct: 4 EMHGTTIFAMLRDGRGAMAGDGQVTFGNNMVMKRGARKVRRLYHDRVVAGFAGSVADAFT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ EKKL+++ L R++VELAK+WR DK L+ LEAM+++ D L+++G G+V++P
Sbjct: 64 LFEKFEKKLDEFQGNLPRAAVELAKEWRSDKILQKLEAMLIVMDARDLLIVSGGGEVIQP 123
Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
++G+ AIGSGG Y + +TQ EIA++A+ IA++ICVYTN IVLET+ V
Sbjct: 124 DDGICAIGSGGGYALAAGRALARNTQLEPAEIAKQALIIASEICVYTNDQIVLETVGV 181
>gi|312126813|ref|YP_003991687.1| 20S proteasome subunits A and B [Caldicellulosiruptor
hydrothermalis 108]
gi|311776832|gb|ADQ06318.1| 20S proteasome A and B subunits [Caldicellulosiruptor
hydrothermalis 108]
Length = 176
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/174 (55%), Positives = 125/174 (71%), Gaps = 3/174 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ Q +MK+ A+KVR+L G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGRVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++ADK V++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKEHLFVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI-VLE 183
+ + AIGSGG Y +A L ST SA EIA+KA+ IAA ICVYTN+NI VLE
Sbjct: 122 DNIAAIGSGGPYALAAARALLQSTDLSAAEIAKKALEIAASICVYTNNNITVLE 175
>gi|312876489|ref|ZP_07736472.1| 20S proteasome A and B subunits [Caldicellulosiruptor lactoaceticus
6A]
gi|311796700|gb|EFR13046.1| 20S proteasome A and B subunits [Caldicellulosiruptor lactoaceticus
6A]
Length = 176
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/174 (55%), Positives = 126/174 (72%), Gaps = 3/174 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ Q +MK+ A+KVR+L G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGRVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++ADK LV++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKEHLLVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI-VLE 183
+ + AIGSGG Y +A L +T SA EIA+KA+ IAA ICVYTN+NI VLE
Sbjct: 122 DNIAAIGSGGPYALAAARALLQNTDLSAAEIAKKALEIAASICVYTNNNITVLE 175
>gi|296504325|ref|YP_003666025.1| ATP-dependent protease peptidase [Bacillus thuringiensis BMB171]
gi|296325377|gb|ADH08305.1| ATP-dependent protease peptidase [Bacillus thuringiensis BMB171]
Length = 153
Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/148 (58%), Positives = 115/148 (77%), Gaps = 3/148 (2%)
Query: 41 VMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD 100
VMK ARKVR+L +G ++AGFAGS ADAFTL E E KLE+Y L R++VE+AK WR D
Sbjct: 6 VMKHTARKVRKLFQGKVLAGFAGSVADAFTLFEMFEGKLEEYNGNLQRAAVEMAKQWRGD 65
Query: 101 KYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARAL---MSTQNS 157
K LR LEAM+++ DKT L+++G G+V+EP++G++AIGSGG+YALSA RAL S +
Sbjct: 66 KMLRQLEAMLIVMDKTTMLLVSGTGEVIEPDDGILAIGSGGNYALSAGRALKQYASEHLT 125
Query: 158 AEEIARKAMSIAADICVYTNHNIVLETL 185
A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 126 AKQIAKASLEIAGDICVYTNHNIIVEEL 153
>gi|124516259|gb|EAY57767.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit HslV
[Leptospirillum rubarum]
gi|206603100|gb|EDZ39580.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Leptospirillum sp. Group II '5-way CG']
Length = 180
Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 126/172 (73%), Gaps = 1/172 (0%)
Query: 19 LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
++VR+ V + GDGQ++LG ++KA +RKVR L +G ++AGFAGS+ADA TL ER E
Sbjct: 1 MSVRRGDRVALGGDGQITLGTMIVKARSRKVRSLYQGRVLAGFAGSTADALTLFERFESM 60
Query: 79 LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIG 138
LE + + R+SV LAKDWR D+ LR LEA++ +A K T +I+G GDV+EPE G+++IG
Sbjct: 61 LESHQGHVGRASVALAKDWRTDRSLRRLEALLAVASKESTYLISGAGDVIEPEEGLLSIG 120
Query: 139 SGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
SG SYAL++AR L+ T + EEI R+++S+AAD+ +YTNH + + +L G+
Sbjct: 121 SGSSYALASARVLLKHTALTPEEIVRESLSVAADLDIYTNHEMTVLSLPSGE 172
>gi|209696146|ref|YP_002264076.1| ATP-dependent protease peptidase subunit [Aliivibrio salmonicida
LFI1238]
gi|208010099|emb|CAQ80424.1| ATP-dependent protease HslV (heat shock protein HslV) [Aliivibrio
salmonicida LFI1238]
Length = 176
Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ S G + K N +KVRRL +++ GFAGS+ADAF L +
Sbjct: 2 TTIVSVRREGKVVIAGDGQASQGDMIAKGNVKKVRRLYNDSVLVGFAGSTADAFILFDLC 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEAM+++AD T +L+I+G GD++ +N ++
Sbjct: 62 ERKLEMHQGNLTKAAVELAKDWRSDRNLRRLEAMLIVADDTTSLIISGTGDLINADNDLL 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
IGSGG +A SAA AL+ +T A +IA KA++IA D VYTNHN +E L
Sbjct: 122 TIGSGGYFARSAATALLENTDLDAYDIAVKALTIAGDTDVYTNHNHTVEVL 172
>gi|223040633|ref|ZP_03610903.1| ATP-dependent protease HslV [Campylobacter rectus RM3267]
gi|222878091|gb|EEF13202.1| ATP-dependent protease HslV [Campylobacter rectus RM3267]
Length = 177
Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 120/170 (70%), Gaps = 2/170 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R++ G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKIHGGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L+ LL++ +E +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFENNLDHAKGDLLKAVIEFSKEWRKDKYLRKLEAMMLVLDREKIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNI 180
G + AIGSGG+YALSAARAL + EE+ ++++ IA +IC+YTN NI
Sbjct: 122 GKIAAIGSGGNYALSAARALDKFARIDEEELVKESLKIAGEICIYTNTNI 171
>gi|297617132|ref|YP_003702291.1| 20S proteasome A and subunit betas [Syntrophothermus lipocalidus
DSM 12680]
gi|297144969|gb|ADI01726.1| 20S proteasome A and B subunits [Syntrophothermus lipocalidus DSM
12680]
Length = 177
Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
ATTI+ V+KDG V IAGDGQV+ GQT V+KA A+K+R L G ++AGFAGS ADA TL
Sbjct: 2 FRATTIVAVKKDGEVTIAGDGQVTYGQTFVLKAQAKKIRTLYNGKVLAGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E L + L R++VE+AK WR D+ LR LEA++++ADK +I+G G+V+EP+
Sbjct: 62 FERFEDCLRESNGNLTRAAVEVAKQWRTDRVLRRLEALLIVADKEKMFLISGSGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ V+AIGSGG YAL+AARAL+ TQ S+ EIA +A+ IAA+ICV+TN NI +E LK
Sbjct: 122 DQVVAIGSGGPYALAAARALLRHTQLSSREIAEEALRIAAEICVFTNGNISVEQLK 177
>gi|303253152|ref|ZP_07339301.1| ATP-dependent protease peptidase subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307257825|ref|ZP_07539582.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307262229|ref|ZP_07543879.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|322513250|ref|ZP_08066374.1| ATP-dependent protease HslV [Actinobacillus ureae ATCC 25976]
gi|302647834|gb|EFL78041.1| ATP-dependent protease peptidase subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306863731|gb|EFM95657.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306868103|gb|EFM99929.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|322120957|gb|EFX92804.1| ATP-dependent protease HslV [Actinobacillus ureae ATCC 25976]
Length = 173
Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 129/172 (75%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG V K RKVRR+ K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNCVEKGTVRKVRRMYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLIKSAVELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEQDVL 121
Query: 136 AIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ TQN SA+EI +A+ IA DI +Y+NHN V+E +
Sbjct: 122 AIGSGGNYAKAAALALLRTQNNLSAKEIVAEALKIAGDIDIYSNHNHVIEEV 173
>gi|258404688|ref|YP_003197430.1| ATP-dependent protease peptidase subunit [Desulfohalobium retbaense
DSM 5692]
gi|257796915|gb|ACV67852.1| 20S proteasome A and B subunits [Desulfohalobium retbaense DSM
5692]
Length = 181
Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 133/175 (76%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL VR+ V +AGDGQV++GQ V +K ARKVRR+ G I+AGFAGS+ADAFTL
Sbjct: 5 LRGTTILAVRRGDGVAMAGDGQVTMGQAVALKHTARKVRRMYHGKIVAGFAGSTADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ LLRSSVELAK+WR DKYLR LEAM+++AD V+TG GDV+EP+
Sbjct: 65 FERFEAKLEEFRGNLLRSSVELAKEWRTDKYLRRLEAMLVVADAENIFVLTGTGDVIEPD 124
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+GV+ IGSGGSY +A L ++ A++IA +AM IAA++CVYTN ++VLET+
Sbjct: 125 DGVVGIGSGGSYALAAARALLRHSELPAKDIAEQAMHIAAELCVYTNDSLVLETI 179
>gi|257459458|ref|ZP_05624567.1| heat shock protein HslV [Campylobacter gracilis RM3268]
gi|257442883|gb|EEV18017.1| heat shock protein HslV [Campylobacter gracilis RM3268]
Length = 182
Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 127/181 (70%), Gaps = 5/181 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
ATTIL + VI GDGQV+ G TV+K NA K+R++GK GN++AGFAGS+ADAF L
Sbjct: 2 FEATTILAYKGAKGSVIGGDGQVTFGNTVLKGNATKIRKIGKEGNVLAGFAGSTADAFNL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ EK L+ LLR+ +E +K WR DKYLR LEAM+L+ D+ +++G GDV+EP+
Sbjct: 62 FDMFEKCLDGAKGDLLRAVIEFSKQWRKDKYLRKLEAMMLVLDRKNIFLLSGTGDVVEPD 121
Query: 132 NG-VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
+G + AIGSGG+YALSAARAL + EE+ ++++ IA +IC+YTN NI +T + D
Sbjct: 122 DGKIAAIGSGGNYALSAARALDKFASLDEEELVKQSLKIAGEICIYTNENI--KTYAIWD 179
Query: 190 E 190
E
Sbjct: 180 E 180
>gi|312792641|ref|YP_004025564.1| 20S proteasome subunits A and B [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179781|gb|ADQ39951.1| 20S proteasome A and B subunits [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 176
Score = 180 bits (457), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 125/174 (71%), Gaps = 3/174 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ Q +MK+ A+KVR+L G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGRVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++ADK V++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKEHLFVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI-VLE 183
+ + AIGSGG Y +A L +T SA EIA+KA+ IAA ICVYTN+NI VLE
Sbjct: 122 DNIAAIGSGGPYALAAARALLQNTDLSAAEIAKKALEIAASICVYTNNNITVLE 175
>gi|219121376|ref|XP_002185913.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582762|gb|ACI65383.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 174
Score = 180 bits (457), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 119/160 (74%), Gaps = 8/160 (5%)
Query: 31 GDGQVSLGQTVMKANARKVRRLG-KGN------IIAGFAGSSADAFTLLERLEKKLEQYP 83
GDG VS G +K NA K+RR+ KG+ I GFAGS+ADAFTLLERLE KL++YP
Sbjct: 3 GDGMVSQGSIQVKPNAVKIRRIPHKGDDKEHQGTIVGFAGSTADAFTLLERLEMKLDEYP 62
Query: 84 NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSY 143
QL RS VELAK WR DKYLR LEA +++AD T++L +TG GDV+E +G++ +GSG +
Sbjct: 63 GQLARSCVELAKGWRTDKYLRRLEASLIVADATVSLELTGNGDVIESHDGILGVGSGSPF 122
Query: 144 ALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVL 182
A++AARALM + + AE +ARKAM+IAAD+C+YTN ++
Sbjct: 123 AIAAARALMDSSDLDAEAVARKAMNIAADMCIYTNKEFLV 162
>gi|254459093|ref|ZP_05072516.1| ATP-dependent protease HslV [Campylobacterales bacterium GD 1]
gi|207084364|gb|EDZ61653.1| ATP-dependent protease HslV [Campylobacterales bacterium GD 1]
Length = 180
Score = 180 bits (457), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 123/174 (70%), Gaps = 2/174 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
ATTIL + VI GDGQV+ G +V+K NA K+R L +G I+AGFAGS+ADAF L +
Sbjct: 4 ATTILAYKGKNKAVIGGDGQVTFGDSVLKGNATKIRTLHRGKILAGFAGSTADAFNLFDM 63
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E+ LE LL+S +E +K WR DK LR LEAM+++ + ++TG GDV+EPE+G
Sbjct: 64 FEEFLEDKKGDLLKSVIEFSKAWRKDKVLRRLEAMMIVLNNDHIFILTGNGDVVEPEDGE 123
Query: 135 MA-IGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+A IGSGG+YA+SAARAL Q EE+ R+++SIAAD+C+YTNH+I TL+
Sbjct: 124 IASIGSGGNYAISAARALKKHAQLDEEELVRESLSIAADLCIYTNHSIKTLTLE 177
>gi|312135860|ref|YP_004003198.1| 20S proteasome subunits A and B [Caldicellulosiruptor owensensis
OL]
gi|311775911|gb|ADQ05398.1| 20S proteasome A and B subunits [Caldicellulosiruptor owensensis
OL]
Length = 176
Score = 180 bits (456), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 125/174 (71%), Gaps = 3/174 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ Q +MK+ A+KVR+L G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGRVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++ADK V++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKDHLFVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI-VLE 183
+ + AIGSGG Y +A L +T SA EIA+KA+ IAA ICVYTN+NI VLE
Sbjct: 122 DNIAAIGSGGPYALAAARALLQNTDLSAAEIAKKALEIAASICVYTNNNITVLE 175
>gi|168026447|ref|XP_001765743.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682920|gb|EDQ69334.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 460
Score = 180 bits (456), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 141/219 (64%), Gaps = 32/219 (14%)
Query: 1 MVVMGDKHYAVK---MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI 57
MV +H + M TT+L VRKD V+I GDGQV+LG ++K N RKVRRLG N+
Sbjct: 1 MVAFSLRHMHTENRGMLGTTVLCVRKDNKVIIIGDGQVTLGNEIIKPNVRKVRRLG-ANV 59
Query: 58 IAGFAGSSADAFTLLERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILIAD 114
I GFAG +AD+FTL ERLE KLE++ QL R++VELAK WR DK+LR L+A++++AD
Sbjct: 60 IGGFAGGTADSFTLFERLETKLEEHSGNVWQLTRAAVELAKAWRTDKFLRRLDAVMVVAD 119
Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEI------------ 161
I+L ITG GDVLEP +GV+ IGSGGSYA +AARAL+ + AE I
Sbjct: 120 AEISLTITGNGDVLEPYDGVIGIGSGGSYASAAARALIDLPDWGAEAIDIQSPNWDVDDC 179
Query: 162 ------------ARKAMSIAADICVYTNHNIVLETLKVG 188
A+KAM IAAD C+YTNHN +E ++V
Sbjct: 180 VLGCVLGVYDFSAKKAMKIAADCCIYTNHNFTIEQIEVA 218
>gi|303272345|ref|XP_003055534.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463508|gb|EEH60786.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 230
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/182 (58%), Positives = 132/182 (72%), Gaps = 2/182 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
A HATT+L VRK VV+ DGQV+LG V+K N +KVRRL G + AG++ADAF
Sbjct: 24 ASSAHATTVLCVRKGDEVVVMADGQVTLGSQVIKPNVKKVRRLSGGVVGGF-AGATADAF 82
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ERLE KLE++P QL R++VELAK WR DKYLR LEA +++ADK T ITG GDV+E
Sbjct: 83 TLFERLEMKLEEHPGQLTRAAVELAKAWRNDKYLRRLEATMIVADKDHTFQITGGGDVIE 142
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
P +GV+ IGSGGS+A +AARALM A +IA K+M+IAAD CVYTNHN + ET+
Sbjct: 143 PHDGVVGIGSGGSFATAAARALMDIDGMDALKIATKSMNIAADACVYTNHNFITETIGPN 202
Query: 189 DE 190
D+
Sbjct: 203 DD 204
>gi|253583754|ref|ZP_04860952.1| ATP-dependent protease peptidase subunit [Fusobacterium varium ATCC
27725]
gi|251834326|gb|EES62889.1| ATP-dependent protease peptidase subunit [Fusobacterium varium ATCC
27725]
Length = 177
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 139/175 (79%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ ATTI+ V+KDG V +AGDGQV+ G+ V K+NA+K+R++G ++AGFAG++ADAF L+
Sbjct: 2 IRATTIIAVKKDGKVAVAGDGQVTFGEVVFKSNAKKIRKIGNYEVLAGFAGAAADAFALM 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
++ E KL+++ L ++SVELAKDWR DK LR L+AM+++ADK + L+++G GDV+EP+
Sbjct: 62 DKFENKLDEFGGNLKKASVELAKDWRTDKALRVLDAMLIVADKNMILILSGNGDVIEPDG 121
Query: 133 GVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG+YA +AARAL+ + + SAEEIA +AM+IA ++C+YTN NIV + L
Sbjct: 122 DVAAIGSGGNYAYAAARALVRNNKEMSAEEIAVEAMNIAGEMCIYTNLNIVYDVL 176
>gi|312130064|ref|YP_003997404.1| ATP dependent peptidase codwx, codw component [Leadbetterella
byssophila DSM 17132]
gi|311906610|gb|ADQ17051.1| ATP dependent peptidase CodWX, CodW component [Leadbetterella
byssophila DSM 17132]
Length = 180
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 126/173 (72%), Gaps = 2/173 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TT+L V +G + + DGQ ++G TV K+N +K+R L G ++AGFAGS+ADAFTL
Sbjct: 3 KIKSTTVLGVFHNGKLALGADGQATMGNTVAKSNVKKIRTLAGGKVVAGFAGSTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+E+ E+KL Y L R+++EL K+WR D+YL LEAM+++A+K LVI+G GDVLEP+
Sbjct: 63 IEKFEEKLNTYNGNLRRAAIELVKEWRTDRYLSKLEAMMIVANKEEMLVISGSGDVLEPD 122
Query: 132 NGVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVL 182
+ V AIGSG YA +AA AL SAEE+ R+ ++IAADIC+YTNHN ++
Sbjct: 123 SQVAAIGSGSMYAQAAALALKKHAPHLSAEEMVREGLTIAADICIYTNHNFII 175
>gi|149173421|ref|ZP_01852051.1| ATP-dependent protease peptidase subunit [Planctomyces maris DSM
8797]
gi|148847603|gb|EDL61936.1| ATP-dependent protease peptidase subunit [Planctomyces maris DSM
8797]
Length = 186
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 133/177 (75%), Gaps = 1/177 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K +TTILTVR +G V I GDGQV+ G TVMK++ RK+R++ G ++ GFAGS+ADAF+L
Sbjct: 8 KWRSTTILTVRHNGQVAIGGDGQVTHGDTVMKSDTRKIRKILDGQVVCGFAGSTADAFSL 67
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LER E K YP + R++ ELA+DWR D+ LR LEA+I++ + +L+ITG GDV+ P
Sbjct: 68 LERFEVKARDYPGNMPRAATELARDWRTDRVLRKLEALIIVVNDEHSLLITGQGDVVVPS 127
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
+G++ IGSGG+YA +AARAL+ +Q SA EI + ++ IA+DI +YTN+NI++E L+
Sbjct: 128 DGIIGIGSGGNYATAAARALVGHSQLSAAEIVKTSLGIASDIDIYTNNNIIVEELQC 184
>gi|32035736|ref|ZP_00135612.1| COG5405: ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126209200|ref|YP_001054425.1| ATP-dependent protease peptidase subunit [Actinobacillus
pleuropneumoniae L20]
gi|165977173|ref|YP_001652766.1| ATP-dependent protease peptidase subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|190151066|ref|YP_001969591.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307264430|ref|ZP_07546016.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|166221619|sp|A3N334|HSLV_ACTP2 RecName: Full=ATP-dependent protease subunit HslV
gi|238065805|sp|B3GYW3|HSLV_ACTP7 RecName: Full=ATP-dependent protease subunit HslV
gi|238065806|sp|B0BSG5|HSLV_ACTPJ RecName: Full=ATP-dependent protease subunit HslV
gi|126097992|gb|ABN74820.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|165877274|gb|ABY70322.1| ATP-dependent protease [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|189916197|gb|ACE62449.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306870246|gb|EFN02004.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 173
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 129/172 (75%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG V K RKVRR+ K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNCVEKGTVRKVRRMYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLIKSAVELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEQDVL 121
Query: 136 AIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ T+N SA+EI +A+ IA DI +Y+NHN V+E +
Sbjct: 122 AIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDIDIYSNHNHVIEEV 173
>gi|257469327|ref|ZP_05633421.1| ATP-dependent protease peptidase subunit [Fusobacterium ulcerans
ATCC 49185]
gi|317063574|ref|ZP_07928059.1| ATP-dependent protease peptidase subunit [Fusobacterium ulcerans
ATCC 49185]
gi|313689250|gb|EFS26085.1| ATP-dependent protease peptidase subunit [Fusobacterium ulcerans
ATCC 49185]
Length = 177
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 135/175 (77%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ ATTI+ V+KDG V +AGDGQV+ G+ V K NA+K+R++G ++AGFAG++ADAF L+
Sbjct: 2 IRATTIIAVKKDGKVAVAGDGQVTFGEVVFKGNAKKIRKIGDYEVLAGFAGAAADAFALM 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
++ E KL+++ L ++SVELAKDWR DK LR L+AM+++ADK + L+++G GDV+EP+
Sbjct: 62 DKFENKLDEFGGNLKKASVELAKDWRTDKALRVLDAMLIVADKNMILILSGNGDVIEPDG 121
Query: 133 GVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG+YA +AARAL+ SAEEIA +AM IA ++C+YTN NIV + L
Sbjct: 122 DVAAIGSGGNYAYAAARALIRNNKDMSAEEIAVEAMEIAGEMCIYTNLNIVYDVL 176
>gi|167856215|ref|ZP_02478951.1| ATP-dependent protease peptidase subunit [Haemophilus parasuis
29755]
gi|219871414|ref|YP_002475789.1| ATP-dependent protease peptidase subunit [Haemophilus parasuis
SH0165]
gi|240947862|ref|ZP_04752302.1| ATP-dependent protease peptidase subunit [Actinobacillus minor
NM305]
gi|257464771|ref|ZP_05629142.1| ATP-dependent protease peptidase subunit [Actinobacillus minor 202]
gi|254802415|sp|B8F689|HSLV_HAEPS RecName: Full=ATP-dependent protease subunit HslV
gi|167852670|gb|EDS23948.1| ATP-dependent protease peptidase subunit [Haemophilus parasuis
29755]
gi|219691618|gb|ACL32841.1| ATP-dependent protease peptidase subunit [Haemophilus parasuis
SH0165]
gi|240297824|gb|EER48260.1| ATP-dependent protease peptidase subunit [Actinobacillus minor
NM305]
gi|257450431|gb|EEV24474.1| ATP-dependent protease peptidase subunit [Actinobacillus minor 202]
Length = 173
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 128/170 (75%), Gaps = 2/170 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG V K RKVRRL K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNCVEKGTVRKVRRLYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLVKSAVELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEFDVL 121
Query: 136 AIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLE 183
AIGSGG+YA +AA AL+ T+N SA+EI +A+ IA DI +Y+NHN V+E
Sbjct: 122 AIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDIDIYSNHNHVIE 171
>gi|154174723|ref|YP_001408328.1| ATP-dependent protease peptidase subunit [Campylobacter curvus
525.92]
gi|166221632|sp|A7GYN6|HSLV_CAMC5 RecName: Full=ATP-dependent protease subunit HslV
gi|112803190|gb|EAU00534.1| ATP-dependent protease HslV [Campylobacter curvus 525.92]
Length = 180
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 121/170 (71%), Gaps = 2/170 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R++ G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKIKDGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E+ LE LL++ +E +K WR DKYLR LEAM+L+ ++ +++G GDV+EPE+
Sbjct: 62 DMFEENLEHAKGDLLKAVIEFSKAWRKDKYLRKLEAMMLVLNREKIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADICVYTNHNI 180
G + AIGSGG++ALSAARAL + EE + +++++IA +IC+YTN NI
Sbjct: 122 GKIAAIGSGGNFALSAARALDKFADIDEEKLVKESLTIAGEICIYTNTNI 171
>gi|154148167|ref|YP_001406620.1| ATP-dependent protease peptidase subunit [Campylobacter hominis
ATCC BAA-381]
gi|166221634|sp|A7I279|HSLV_CAMHC RecName: Full=ATP-dependent protease subunit HslV
gi|153804176|gb|ABS51183.1| ATP-dependent protease HslV [Campylobacter hominis ATCC BAA-381]
Length = 181
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 126/171 (73%), Gaps = 3/171 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
ATTIL + +I GDGQV+ G TV+K A K+R++GK G ++AGFAGS+ DAF L
Sbjct: 2 FKATTILAYKGKNGSIIGGDGQVTFGNTVLKGTATKIRKIGKDGKVLAGFAGSTTDAFNL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ EK LE N LL+++V+ +K+WR DKYLR LEAM+L+ D+ +++G+GDV+EP+
Sbjct: 62 FDMFEKCLESAKNDLLKAAVDFSKEWRKDKYLRKLEAMMLVLDREHIFLLSGVGDVVEPD 121
Query: 132 NG-VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI 180
+G + AIGSGG+YALSAARAL N + EE+ ++++ IA++IC+YTN++I
Sbjct: 122 DGKIAAIGSGGNYALSAARALDKFGNLNEEELVKESLKIASEICIYTNNHI 172
>gi|254516117|ref|ZP_05128177.1| ATP-dependent protease HslV [gamma proteobacterium NOR5-3]
gi|219675839|gb|EED32205.1| ATP-dependent protease HslV [gamma proteobacterium NOR5-3]
Length = 156
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/150 (58%), Positives = 115/150 (76%), Gaps = 1/150 (0%)
Query: 37 LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD 96
+G T+MK NARKVRRL K ++AGFAG +ADAFTL E E +LE++ QL+R++VELAK
Sbjct: 1 MGNTIMKGNARKVRRLYKDQVLAGFAGGTADAFTLFELFEAQLEKHNGQLVRAAVELAKA 60
Query: 97 WRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQ 155
WR ++ LR LEA++ +ADK +LVI+G GDV+EPEN ++AIGSGGS+A +AA AL+ +TQ
Sbjct: 61 WRTERSLRQLEALLAVADKETSLVISGNGDVIEPENNLIAIGSGGSFAQAAAMALLDNTQ 120
Query: 156 NSAEEIARKAMSIAADICVYTNHNIVLETL 185
SA EI K + IAADIC+YTN +E L
Sbjct: 121 LSAREIVEKGLGIAADICIYTNEQRTIEQL 150
>gi|313681856|ref|YP_004059594.1| 20S proteasome a and b subunits [Sulfuricurvum kujiense DSM 16994]
gi|313154716|gb|ADR33394.1| 20S proteasome A and B subunits [Sulfuricurvum kujiense DSM 16994]
Length = 177
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 126/176 (71%), Gaps = 4/176 (2%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
ATTIL + VI GDGQV+ GQTV+K NA K+R L G ++AGFAGS+ADAF L +
Sbjct: 4 ATTILAFKGKNKAVIGGDGQVTFGQTVLKNNATKIRTLYNGEVLAGFAGSTADAFNLFDM 63
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG- 133
E+ L Q +L+++ ++ +K WR DK LR LEAM+++ ++ ++TG GDV+EPE+G
Sbjct: 64 FEEHLTQRKGELIKAVIDFSKAWRKDKVLRRLEAMMIVLNQKHIFILTGNGDVVEPEDGE 123
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADICVYTNHNIVLETLKVG 188
+ AIGSGGSYA+SAARAL EE + ++++++AAD+C+YTNHNI +TL +G
Sbjct: 124 IAAIGSGGSYAISAARALKKHTTLDEETLVKESLAVAADLCIYTNHNI--KTLSLG 177
>gi|28378505|ref|NP_785397.1| ATP-dependent protease peptidase subunit [Lactobacillus plantarum
WCFS1]
gi|254556719|ref|YP_003063136.1| ATP-dependent protease peptidase subunit [Lactobacillus plantarum
JDM1]
gi|300767451|ref|ZP_07077363.1| T01 family HslV component of HslUV peptidase [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308180662|ref|YP_003924790.1| ATP-dependent protease peptidase subunit [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|47605686|sp|Q88W25|HSLV_LACPL RecName: Full=ATP-dependent protease subunit HslV
gi|28271341|emb|CAD64246.1| ATP-dependent protease HslV [Lactobacillus plantarum WCFS1]
gi|254045646|gb|ACT62439.1| ATP-dependent protease peptidase subunit [Lactobacillus plantarum
JDM1]
gi|300495270|gb|EFK30426.1| T01 family HslV component of HslUV peptidase [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308046153|gb|ADN98696.1| ATP-dependent protease peptidase subunit [Lactobacillus plantarum
subsp. plantarum ST-III]
Length = 180
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 129/177 (72%), Gaps = 3/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
K ATTI VR++G +AGDGQV++G+ VMK A KVRR+ ++ GFAGS ADAF
Sbjct: 4 KFEATTICAVRQNGHNAMAGDGQVTMGEKVVMKGTAHKVRRIYNDQVVVGFAGSVADAFN 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L +R EKKL ++ L R++VELA++WR D+ L+ LEA++++ +K L+++G G+V+ P
Sbjct: 64 LEDRFEKKLNEFSGNLQRAAVELAQEWRSDQALQKLEALLIVMNKDDMLLVSGSGEVITP 123
Query: 131 ENGVMAIGSGGSYALSAARA--LMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+N V+AIGSGG++AL+AARA L + SA+E+A A+ IA DI ++TNHN++ ETL
Sbjct: 124 DNDVLAIGSGGNFALAAARAMQLHAKDMSAKEVAEAAIHIAGDIDIFTNHNVISETL 180
>gi|307246665|ref|ZP_07528735.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307255650|ref|ZP_07537454.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307260101|ref|ZP_07541812.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306852365|gb|EFM84600.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306861327|gb|EFM93317.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865835|gb|EFM97712.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 173
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 128/172 (74%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKD V I GDGQ +LG V K RKVRR+ K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDSKVAIGGDGQATLGNCVEKGTVRKVRRMYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLIKSAVELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEQDVL 121
Query: 136 AIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ TQN SA+EI +A+ IA DI +Y+NHN V+E +
Sbjct: 122 AIGSGGNYAKAAALALLRTQNNLSAKEIVAEALKIAGDIDIYSNHNHVIEEV 173
>gi|260892477|ref|YP_003238574.1| 20S proteasome A and B subunits [Ammonifex degensii KC4]
gi|260864618|gb|ACX51724.1| 20S proteasome A and B subunits [Ammonifex degensii KC4]
Length = 177
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTI+ VR++G +AGDGQV+L Q TV+K NARKVRRL +G ++AGFAGS ADA
Sbjct: 1 MRLEGTTIVAVRRNGRTAMAGDGQVTLAQNTVIKHNARKVRRLYQGRVLAGFAGSVADAL 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E E K+E+ LLR++V LAK+WR D+ LEA++++AD L+ITG G+VLE
Sbjct: 61 TLFECFESKIEEAQGNLLRAAVNLAKEWRTDRRFERLEALLVVADTEHLLLITGGGEVLE 120
Query: 130 PENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++A+GSGG +AL+AARAL+ T A IAR+A+ IAA ICVYTN NIV+E +
Sbjct: 121 PDDGIVAVGSGGPFALAAARALLHHTDYDAATIAREALRIAASICVYTNENIVVEEI 177
>gi|294666816|ref|ZP_06732049.1| ATP-dependent protease peptidase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292603400|gb|EFF46818.1| ATP-dependent protease peptidase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 183
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 138/175 (78%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
+HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 VHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+G GDV+EPE
Sbjct: 70 FELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIISGTGDVIEPE 128
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSY +A L TQ A+ IA +A++IA DIC+YTN N+V+E L
Sbjct: 129 DGIIAIGSGGSYALSAARALLAHTQLDAKTIAAEAINIAGDICIYTNRNVVVEEL 183
>gi|118474850|ref|YP_892167.1| ATP-dependent protease peptidase subunit [Campylobacter fetus
subsp. fetus 82-40]
gi|166221633|sp|A0RPN4|HSLV_CAMFF RecName: Full=ATP-dependent protease subunit HslV
gi|118414076|gb|ABK82496.1| ATP-dependent protease HslV [Campylobacter fetus subsp. fetus
82-40]
Length = 180
Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 127/180 (70%), Gaps = 4/180 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + + +I GDGQVS G TV+K NA K+R+L G I+AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGNKGSIIGGDGQVSFGNTVLKGNAVKIRKLLGGKILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E+ LE LL++ +E +K+WR DK LR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFERILESTKGDLLKAVIEFSKEWRKDKVLRKLEAMMLVLDREHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
G + AIGSGG+YAL+AARAL + + EE+ ++++ IA +IC+YTN NI +T + DE
Sbjct: 122 GKIAAIGSGGNYALAAARALDKFADINEEELVKESLKIAGEICIYTNTNI--KTYALWDE 179
>gi|21241408|ref|NP_640990.1| ATP-dependent protease peptidase subunit [Xanthomonas axonopodis
pv. citri str. 306]
gi|24211779|sp|Q8PPP8|HSLV_XANAC RecName: Full=ATP-dependent protease subunit HslV
gi|21106743|gb|AAM35526.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
axonopodis pv. citri str. 306]
Length = 183
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 138/175 (78%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
+HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 VHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+G GDV+EPE
Sbjct: 70 FELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIISGTGDVVEPE 128
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSY +A L TQ A+ IA +A++IA DIC+YTN N+V+E L
Sbjct: 129 DGIIAIGSGGSYALSAARALLAHTQLDAKTIAAEAINIAGDICIYTNRNVVVEEL 183
>gi|315924467|ref|ZP_07920689.1| heat shock protein HslVU [Pseudoramibacter alactolyticus ATCC
23263]
gi|315622346|gb|EFV02305.1| heat shock protein HslVU [Pseudoramibacter alactolyticus ATCC
23263]
Length = 180
Score = 177 bits (450), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/176 (55%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ ATTI+ +R +G V IAGDGQV++G+ V MKA A+KVR L G ++AGFAGS ADAFTL
Sbjct: 2 LKATTIVGIRHNGEVAIAGDGQVTMGEAVIMKATAKKVRTLYNGKVLAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE Y L R++VELAKDWR DK +R LEA++++ D L+I+G G+V+EP+
Sbjct: 62 CELFEHKLETYNGNLKRAAVELAKDWRQDKIMRKLEALLIVMDADTLLIISGTGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ + AIGSGG+YAL+AARAL + + SA++IA +A+ IA+ ICVYTN NI + TL+
Sbjct: 122 DEIAAIGSGGNYALAAARALKAHSDLSAKKIAHEALKIASQICVYTNDNIRVLTLE 177
>gi|188990097|ref|YP_001902107.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
pv. campestris str. B100]
gi|167731857|emb|CAP50041.1| proteasome-like complex protease subunit [Xanthomonas campestris
pv. campestris]
Length = 259
Score = 177 bits (450), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 145/175 (82%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
+HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 86 VHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGRDGQVLAGFAGAAADAFTL 145
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+G GDV+EPE
Sbjct: 146 FELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIISGTGDVIEPE 204
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSYALSAARAL++ T+ A+ IA +A++IA DIC+YTN N+V+E L
Sbjct: 205 DGIIAIGSGGSYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVVVEEL 259
>gi|157877319|ref|XP_001686982.1| hs1vu complex proteolytic subunit-like; hs1vu complex proteolytic
subunit-like, threonine peptidase, Clan T(1), family T1B
[Leishmania major]
gi|68130057|emb|CAJ09365.1| hs1vu complex proteolytic subunit-like [Leishmania major strain
Friedlin]
Length = 214
Score = 177 bits (450), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 132/184 (71%), Gaps = 4/184 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
AV+ TTIL+VRK V++ GD QV+LG+ ++ K++A K+R+L N++ GFAGS+ADA
Sbjct: 17 AVQARHTTILSVRKGSKVILIGDRQVTLGERIVAKSSACKLRKLND-NVVIGFAGSTADA 75
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F L+E+LE KL +P QL R++VELAKDWR D+ LR LEA +++ K TL I G G+V+
Sbjct: 76 FALMEKLENKLNDFPEQLSRAAVELAKDWRTDRALRRLEASLIVCSKEETLEIDGQGNVI 135
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
PE +G++AIGSGG+YA +AARAL+ AE IARKAM IA DI V++N N +E L
Sbjct: 136 TPEADGIIAIGSGGTYAKAAARALIDVDGYDAERIARKAMRIATDIDVFSNSNWDVEILT 195
Query: 187 VGDE 190
+E
Sbjct: 196 RDEE 199
>gi|47094601|ref|ZP_00232246.1| ATP-dependent protease HslV [Listeria monocytogenes str. 4b H7858]
gi|47017025|gb|EAL07913.1| ATP-dependent protease HslV [Listeria monocytogenes str. 4b H7858]
Length = 164
Score = 177 bits (450), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 120/163 (73%), Gaps = 4/163 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V+ DG +AGDGQV+LG++V MK A+KVRRL +IAGFAGS ADAF
Sbjct: 1 MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R+SVELA+ WR D LR LEAM+++ DK L+++G G+V+E
Sbjct: 61 TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIA 169
P++G++AIGSGG+YAL+A RAL Q A++IAR A+ IA
Sbjct: 121 PDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIA 163
>gi|268317429|ref|YP_003291148.1| 20S proteasome A and B subunits [Rhodothermus marinus DSM 4252]
gi|262334963|gb|ACY48760.1| 20S proteasome A and B subunits [Rhodothermus marinus DSM 4252]
Length = 183
Score = 177 bits (449), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 126/172 (73%), Gaps = 2/172 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT+L VR +G V + DGQ +LG TVMK A+KVR L G I+AGFAG++ADA TL
Sbjct: 6 IHGTTVLGVRHNGRVALGADGQATLGNTVMKRRAQKVRALYNGKILAGFAGATADALTLF 65
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KL+Q+ +LR++VELAKDWR D+YLR L+A++ +A L+I+G GD++EP++
Sbjct: 66 ERFEGKLQQHGGNVLRAAVELAKDWRTDRYLRRLDALLAVASPDRLLLISGNGDLIEPDD 125
Query: 133 GVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVL 182
++AIGSGG +AL+AARAL + SA I +A+SIAADIC+YTNH +
Sbjct: 126 DIVAIGSGGPFALAAARALRKHRPDLSARAIVEEALSIAADICIYTNHEFTI 177
>gi|197123190|ref|YP_002135141.1| ATP-dependent protease peptidase subunit [Anaeromyxobacter sp. K]
gi|220917979|ref|YP_002493283.1| 20S proteasome A and B subunits [Anaeromyxobacter dehalogenans
2CP-1]
gi|238065807|sp|B4UIH9|HSLV_ANASK RecName: Full=ATP-dependent protease subunit HslV
gi|254802326|sp|B8JES1|HSLV_ANAD2 RecName: Full=ATP-dependent protease subunit HslV
gi|196173039|gb|ACG74012.1| 20S proteasome A and B subunits [Anaeromyxobacter sp. K]
gi|219955833|gb|ACL66217.1| 20S proteasome A and B subunits [Anaeromyxobacter dehalogenans
2CP-1]
Length = 181
Score = 177 bits (449), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 124/178 (69%), Gaps = 5/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MH TT+L VR++G VVIAGDGQV+L +TVMKA ARKVRRLG+G ++AGFAG++ADAF L
Sbjct: 4 MHGTTVLCVRREGRVVIAGDGQVTLDKTVMKATARKVRRLGEGQVVAGFAGATADAFQLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E EKKL+++ L R++VELAK WR D+ LR LEA++L+AD+ LV++G GDV+EP+
Sbjct: 64 ELFEKKLKEHARSLPRAAVELAKQWRTDRMLRRLEALLLVADREHLLVLSGAGDVIEPDP 123
Query: 133 -----GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G +A L + A ++A +AM +AA+IC+YTN N+ +E L
Sbjct: 124 VANGAAAAIGSGGPYALAAARALLAHSALDARQVAEEAMKLAAEICIYTNGNLTIEEL 181
>gi|323144076|ref|ZP_08078719.1| ATP-dependent protease HslVU, peptidase subunit [Succinatimonas
hippei YIT 12066]
gi|322416152|gb|EFY06843.1| ATP-dependent protease HslVU, peptidase subunit [Succinatimonas
hippei YIT 12066]
Length = 175
Score = 177 bits (449), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 129/173 (74%), Gaps = 2/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI++VR++ VV + GDGQV++GQ+ V+KANA KVRRL KG +IAGFAGS+ADAFTLL+
Sbjct: 2 TTIVSVRRNNVVAVGGDGQVTMGQSSVLKANAVKVRRLFKGKVIAGFAGSTADAFTLLDL 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E KLE++ L R+ V L K+WR D+ LR LEA++++ADK + +++G GDV+ ++ +
Sbjct: 62 FESKLEEHQGILERACVALVKNWRTDRALRKLEAILIVADKNASFLVSGTGDVVRMDDDI 121
Query: 135 MAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+A GSGG+Y +A + +T A+ I +K++ IA DICVYTN N V+ET++
Sbjct: 122 LATGSGGNYALAAARALVANTDLDAKTIVKKSLEIAGDICVYTNQNHVIETIE 174
>gi|303249979|ref|ZP_07336181.1| ATP-dependent protease peptidase subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307251033|ref|ZP_07532957.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307253409|ref|ZP_07535280.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302651042|gb|EFL81196.1| ATP-dependent protease peptidase subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306856863|gb|EFM88995.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306859088|gb|EFM91130.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 173
Score = 177 bits (449), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 128/172 (74%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKD V I GDGQ +LG V K RKVRR+ K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDSKVAIGGDGQATLGNCVEKGTVRKVRRMYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLIKSAVELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEQDVL 121
Query: 136 AIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ T+N SA+EI +A+ IA DI +Y+NHN V+E +
Sbjct: 122 AIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDIDIYSNHNHVIEEV 173
>gi|259046719|ref|ZP_05737120.1| heat shock protein HslV [Granulicatella adiacens ATCC 49175]
gi|259036615|gb|EEW37870.1| heat shock protein HslV [Granulicatella adiacens ATCC 49175]
Length = 176
Score = 177 bits (449), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 128/174 (73%), Gaps = 4/174 (2%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V+KD V +AGDGQV++G+ V MK ARK+RR+ ++ GFAG ADA TL E
Sbjct: 2 TTICAVKKDNQVAMAGDGQVTMGEKVIMKGTARKIRRIFDNQVLVGFAGGVADAITLEEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E KL+Q+ L R+++E+AK WR D+ L+ LEAM+++ +K L+++G G+V+EP++G+
Sbjct: 62 FEDKLKQFKGNLQRAAIEMAKQWRSDRGLQKLEAMLIVMNKEQVLLVSGTGEVIEPDDGI 121
Query: 135 MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
+ IGSGG+YALSAAR L+ +S AE+IAR+++ IA++I ++TN NI+ ETL
Sbjct: 122 LTIGSGGNYALSAARGLLRFGDSNLTAEDIARESLKIASEIDIFTNDNIITETL 175
>gi|78046248|ref|YP_362423.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|289664008|ref|ZP_06485589.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
pv. vasculorum NCPPB702]
gi|325918372|ref|ZP_08180503.1| HslV component of HslUV peptidase [Xanthomonas vesicatoria ATCC
35937]
gi|325925417|ref|ZP_08186816.1| HslV component of HslUV peptidase [Xanthomonas perforans 91-118]
gi|325928768|ref|ZP_08189937.1| HslV component of HslUV peptidase [Xanthomonas perforans 91-118]
gi|123585935|sp|Q3BXU0|HSLV_XANC5 RecName: Full=ATP-dependent protease subunit HslV
gi|78034678|emb|CAJ22323.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|325535395|gb|EGD07260.1| HslV component of HslUV peptidase [Xanthomonas vesicatoria ATCC
35937]
gi|325540849|gb|EGD12422.1| HslV component of HslUV peptidase [Xanthomonas perforans 91-118]
gi|325544177|gb|EGD15561.1| HslV component of HslUV peptidase [Xanthomonas perforans 91-118]
Length = 183
Score = 177 bits (448), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 138/175 (78%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
+HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 VHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+G GDV+EPE
Sbjct: 70 FELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIISGTGDVIEPE 128
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSY +A L T+ A+ IA +A++IA DIC+YTN N+V+E L
Sbjct: 129 DGIIAIGSGGSYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVVVEEL 183
>gi|21232923|ref|NP_638840.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66767004|ref|YP_241766.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
pv. campestris str. 8004]
gi|24211774|sp|Q8P551|HSLV_XANCP RecName: Full=ATP-dependent protease subunit HslV
gi|81307010|sp|Q4UYX7|HSLV_XANC8 RecName: Full=ATP-dependent protease subunit HslV
gi|21114759|gb|AAM42764.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66572336|gb|AAY47746.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
campestris pv. campestris str. 8004]
Length = 183
Score = 177 bits (448), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 138/175 (78%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
+HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 VHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGRDGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+G GDV+EPE
Sbjct: 70 FELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIISGTGDVIEPE 128
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSY +A L T+ A+ IA +A++IA DIC+YTN N+V+E L
Sbjct: 129 DGIIAIGSGGSYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVVVEEL 183
>gi|325922227|ref|ZP_08184013.1| HslV component of HslUV peptidase [Xanthomonas gardneri ATCC 19865]
gi|325547297|gb|EGD18365.1| HslV component of HslUV peptidase [Xanthomonas gardneri ATCC 19865]
Length = 183
Score = 177 bits (448), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 137/175 (78%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
+HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 VHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+G GDV+EPE
Sbjct: 70 FELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIISGTGDVIEPE 128
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSY +A L T+ A+ IA +A+ IA DIC+YTN N+V+E L
Sbjct: 129 DGIIAIGSGGSYALSAARALLAHTELDAKTIATEAIHIAGDICIYTNRNVVVEEL 183
>gi|227890940|ref|ZP_04008745.1| ATP-dependent protease peptidase subunit [Lactobacillus salivarius
ATCC 11741]
gi|301299311|ref|ZP_07205596.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|227867349|gb|EEJ74770.1| ATP-dependent protease peptidase subunit [Lactobacillus salivarius
ATCC 11741]
gi|300214645|gb|ADJ79061.1| ATP-dependent protease hslV [Lactobacillus salivarius CECT 5713]
gi|300853051|gb|EFK80650.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 175
Score = 177 bits (448), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 125/173 (72%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V+ +G IAGDGQV+LG+ V MK +ARKVRR+ + GFAG ADA L E+
Sbjct: 2 TTICAVKHNGKTAIAGDGQVTLGEKVIMKGSARKVRRIYNDKVAVGFAGGVADAINLEEK 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E KL +Y L R++VELA++WR D+ L+ LEAM+++ DK L+++G G+V+ P+NGV
Sbjct: 62 FENKLNEYSGNLERAAVELAQEWRGDRTLQKLEAMLIVIDKDNLLIVSGSGEVIAPDNGV 121
Query: 135 MAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YA +AA AL S SA EIA+ A++IAADI ++TNHNI++E L
Sbjct: 122 LAIGSGGNYAQAAAVALSEYSKDMSAGEIAKAALNIAADIDIFTNHNIIVEEL 174
>gi|146103656|ref|XP_001469616.1| hs1vu complex proteolytic subunit-like; hs1vu complex proteolytic
subunit-like,threonine peptidase, Clan T(1), family T1B
[Leishmania infantum]
gi|25956176|emb|CAC82584.1| HslVU complex proteolytic subunit [Leishmania infantum]
gi|134073986|emb|CAM72726.1| hs1vu complex proteolytic subunit-like [Leishmania infantum JPCM5]
gi|322503769|emb|CBZ38855.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 220
Score = 177 bits (448), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 130/179 (72%), Gaps = 4/179 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
AV+ TTIL+VRK V++ GD QV+LG+ ++ K++A K+R+L N++ GFAGS+ADA
Sbjct: 17 AVQARHTTILSVRKGNKVILIGDRQVTLGERIVAKSSACKLRKLND-NVVIGFAGSTADA 75
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F L+E+LE KL +P QL R++VELAKDWR D+ LR LEA +++ K TL I G G+V+
Sbjct: 76 FALMEKLENKLNDFPEQLSRAAVELAKDWRTDRALRRLEASLIVCSKEETLEIDGQGNVI 135
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
PE +G++AIGSGG+YA +AARAL+ AE IARKAM IA DI V++N N +E L
Sbjct: 136 TPEADGIIAIGSGGTYAKAAARALIDVDGYDAERIARKAMRIATDIDVFSNSNWDVEIL 194
>gi|34557657|ref|NP_907472.1| ATP-dependent protease peptidase subunit [Wolinella succinogenes
DSM 1740]
gi|47605631|sp|Q7M8Z6|HSLV_WOLSU RecName: Full=ATP-dependent protease subunit HslV
gi|34483374|emb|CAE10372.1| HEAT SHOCK PROTEIN [Wolinella succinogenes]
Length = 176
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 121/172 (70%), Gaps = 2/172 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + + VI GDGQV+ G V+K NA K+R L G I++GFAGS+ADAFTL
Sbjct: 2 FEATTILAYKGENHSVIGGDGQVTFGNCVLKGNATKIRMLYNGKILSGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E E+ LE L++S ++ +K+WR DKYLR LEAM+++ D+ +++G GDV+EPE+
Sbjct: 62 EMFERILENRKGDLVKSVIDFSKEWRKDKYLRRLEAMMIVMDRERLFILSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQNSAE-EIARKAMSIAADICVYTNHNIVL 182
G + AIGSGG+YALSAARAL + E E+ R+++ IA ++C+YTN NI L
Sbjct: 122 GKIAAIGSGGNYALSAARALDKFADLPESELVRESLLIAGELCIYTNTNIKL 173
>gi|322490991|emb|CBZ26255.1| hs1vu complex proteolytic subunit-like,hs1vu complex proteolytic
subunit-like, threonine peptidase, Clan T(1), family T1B
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 226
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 130/179 (72%), Gaps = 4/179 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
AV+ TTIL+VRK V++ GD QV+LG+ ++ K++A K+R+L N++ GFAGS+ADA
Sbjct: 17 AVQARHTTILSVRKGNKVILIGDRQVTLGERIVAKSSACKLRKLND-NVVIGFAGSTADA 75
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F L+E+LE KL +P QL R++VELAKDWR D+ LR LEA +++ K TL I G G+V+
Sbjct: 76 FALMEKLENKLNDFPEQLSRAAVELAKDWRTDRALRRLEASLIVCSKEETLEIDGQGNVI 135
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
PE +G++AIGSGG+YA +AARAL+ AE IARKAM IA DI V++N N +E L
Sbjct: 136 TPEADGIIAIGSGGTYAKAAARALIDVDGYDAERIARKAMRIATDIDVFSNSNWDVEIL 194
>gi|294625643|ref|ZP_06704266.1| ATP-dependent protease peptidase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292600066|gb|EFF44180.1| ATP-dependent protease peptidase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 183
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 137/175 (78%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
+HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 VHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KL+++ L R++VELAKDWR ++ L LEA++ +ADK +L+I+G GDV+EPE
Sbjct: 70 FELFEAKLDKH-GHLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIISGTGDVIEPE 128
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSY +A L TQ A+ IA +A++IA DIC+YTN N+V+E L
Sbjct: 129 DGIIAIGSGGSYALSAARALLAHTQLDAKTIAAEAINIAGDICIYTNRNVVVEEL 183
>gi|307720796|ref|YP_003891936.1| 20S proteasome A and subunit Bs [Sulfurimonas autotrophica DSM
16294]
gi|306978889|gb|ADN08924.1| 20S proteasome A and B subunits [Sulfurimonas autotrophica DSM
16294]
Length = 179
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 119/168 (70%), Gaps = 2/168 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
ATTIL R VI GDGQV+ G +V+K NA K+R L G I+AGFAGS+ADAF L +
Sbjct: 4 ATTILAYRGKNKSVIGGDGQVTFGDSVLKGNATKIRTLYHGKILAGFAGSTADAFNLFDM 63
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG- 133
E+ LE LL+S VE +K WR DK LR LEAM+++ +K ++TG GDV+EPE+G
Sbjct: 64 FEEFLENKKGDLLKSVVEFSKAWRKDKVLRRLEAMMIVLNKEHIFILTGNGDVVEPEDGE 123
Query: 134 VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI 180
+ +IGSGG++A+SAARAL + E++ ++++ IAAD+C+YTNHNI
Sbjct: 124 IASIGSGGNFAISAARALKKHASLDEEDLVKESLHIAADLCIYTNHNI 171
>gi|261491847|ref|ZP_05988426.1| ATP-dependent protease peptidase subunit [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261494682|ref|ZP_05991162.1| ATP-dependent protease peptidase subunit [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261309647|gb|EEY10870.1| ATP-dependent protease peptidase subunit [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261312502|gb|EEY13626.1| ATP-dependent protease peptidase subunit [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 173
Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 127/172 (73%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG + K RKVRRL K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNCIEKGTVRKVRRLYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+ + L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLVKSAVELAKEWRTERALRRLEAMMIVANDSEFLLVSGSGDVIEPEQDVL 121
Query: 136 AIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ T+N SA+EI +A+ IA DI +Y+NH V+E +
Sbjct: 122 AIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDIDIYSNHKHVIEEV 173
>gi|90961924|ref|YP_535840.1| ATP-dependent protease peptidase subunit [Lactobacillus salivarius
UCC118]
gi|122448947|sp|Q1WTI9|HSLV_LACS1 RecName: Full=ATP-dependent protease subunit HslV
gi|90821118|gb|ABD99757.1| ATP-dependent protease hslV [Lactobacillus salivarius UCC118]
Length = 175
Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 125/173 (72%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V+ +G IAGDGQV+LG+ V MK +ARKVRR+ + GFAG ADA L E+
Sbjct: 2 TTICAVKHNGKTAIAGDGQVTLGEKVIMKGSARKVRRIYNDKVAVGFAGGVADAINLEEK 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E KL +Y L R++VELA++WR D+ L+ LEAM+++ DK L+++G G+V+ P+NGV
Sbjct: 62 FENKLNEYSGNLERAAVELAQEWRGDRTLQKLEAMLIVIDKDNLLIVSGSGEVIVPDNGV 121
Query: 135 MAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YA +AA AL S SA EIA+ A++IAADI ++TNHNI++E L
Sbjct: 122 LAIGSGGNYAQAAAVALSEYSKDMSAGEIAKAALNIAADIDIFTNHNIIVEEL 174
>gi|302035681|ref|YP_003796003.1| heat shock protein hslUV, peptidase component [Candidatus
Nitrospira defluvii]
gi|300603745|emb|CBK40077.1| Heat shock protein HslUV, peptidase component [Candidatus
Nitrospira defluvii]
Length = 178
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 131/174 (75%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ +TT+L VR+ V + DGQV++G TVMK NARK+RR+ ++AGFAG++ADAFTL
Sbjct: 3 IRSTTVLCVRRGSQVTMGCDGQVTVGTTVMKHNARKMRRMHGDTVLAGFAGATADAFTLF 62
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E KL +Y L R++VELAKDWR D+ LR LEA++ +AD + +I+G GDV+EPE+
Sbjct: 63 EKFEAKLAEYRGNLTRAAVELAKDWRTDRVLRRLEALLAVADLDHSFIISGTGDVVEPED 122
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG YAL+AARAL+ ++ AE++ R+++ IA I +YTN IV+E+L
Sbjct: 123 GILAIGSGGPYALAAARALLGHSELVAEQVVRESLMIAGGIDIYTNQQIVIESL 176
>gi|218296679|ref|ZP_03497397.1| 20S proteasome A and B subunits [Thermus aquaticus Y51MC23]
gi|218242992|gb|EED09525.1| 20S proteasome A and B subunits [Thermus aquaticus Y51MC23]
Length = 194
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 129/177 (72%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAF 69
V++H TTIL VRK GV +AGDGQV+LGQTV+K A KVRRL G ++ GFAG ADA
Sbjct: 15 VEIHGTTILAVRKGGVTALAGDGQVTLGQTVLKRAAVKVRRLEVGEGVLVGFAGGVADAL 74
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
LLER E+KL++ LL+ +VE AK WR D+ LR+LEAMI+ AD+ ++++G G+V+
Sbjct: 75 ALLERFEEKLKEAKGNLLKGAVETAKLWRTDRVLRHLEAMIVAADRENMVLLSGSGEVIA 134
Query: 130 PENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
PE ++A+GSGG YAL+AA+AL + SA+EIA +A+ IAA++ +YT+ + + TL
Sbjct: 135 PEEPLLAVGSGGPYALAAAKALFRHSALSAKEIAEEALKIAAEVDLYTSGQVTVLTL 191
>gi|254360689|ref|ZP_04976838.1| arginine ABC superfamily ATP binding cassette transporter, membrane
protein [Mannheimia haemolytica PHL213]
gi|1346417|sp|P49617|HSLV_PASHA RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Protein lapC
gi|387856|gb|AAA25533.1| membrane protein [Mannheimia haemolytica]
gi|153091229|gb|EDN73234.1| arginine ABC superfamily ATP binding cassette transporter, membrane
protein [Mannheimia haemolytica PHL213]
Length = 173
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG + K RKVRRL K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNCIEKGTVRKVRRLYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+ + L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLVKSAVELAKEWRTERALRRLEAMMIVANDSEFLLVSGSGDVIEPEQDVL 121
Query: 136 AIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLE 183
AIGSGG+YA +AA AL+ T+N SA+EI +A+ IA DI +Y+N+N V+E
Sbjct: 122 AIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDIDIYSNYNHVIE 171
>gi|78777573|ref|YP_393888.1| ATP-dependent protease peptidase subunit [Sulfurimonas
denitrificans DSM 1251]
gi|123550054|sp|Q30QS8|HSLV_SULDN RecName: Full=ATP-dependent protease subunit HslV
gi|78498113|gb|ABB44653.1| 20S proteasome, A and B subunits [Sulfurimonas denitrificans DSM
1251]
Length = 181
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 122/175 (69%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + VI GDGQV+ G +V+K NA K+R L G I+AGFAGS+ADAF L
Sbjct: 2 FDATTILAYKGKNRAVIGGDGQVTFGNSVLKGNATKIRTLYNGKILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E+ LE +L+S VE +K WR DK LR LEAM+++ + ++TG GDV+EPE+
Sbjct: 62 DMFEEFLEAKKGDILKSVVEFSKAWRKDKVLRRLEAMMIVLNSEHIFILTGNGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADICVYTNHNIVLETL 185
G + +IGSGG++A+SAARAL + EE + R+++SIAAD+C+YTNHNI + +L
Sbjct: 122 GEIASIGSGGNFAISAARALKKHSSLDEEALVRESLSIAADLCIYTNHNIKVLSL 176
>gi|319785876|ref|YP_004145351.1| 20S proteasome A and subunit betas [Pseudoxanthomonas suwonensis
11-1]
gi|317464388|gb|ADV26120.1| 20S proteasome A and B subunits [Pseudoxanthomonas suwonensis 11-1]
Length = 183
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 133/175 (76%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
HATTI+ VR+ V IAGDGQV+LG TVMK NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 FHATTIVCVRRGDKVAIAGDGQVTLGHTVMKGNARKVRRLGRDGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE++ QL R++VELAKDWR ++ L LEA++ +AD+ +LVI+G GDV+EPE
Sbjct: 70 FELFEAKLEKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADRETSLVISGTGDVIEPE 128
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSY +A L TQ A IA +A+ IA DIC+YTN N+V+E L
Sbjct: 129 DGIIAIGSGGSYALSAARALLAHTQLDARTIATEAIGIAGDICIYTNRNVVVEEL 183
>gi|227513450|ref|ZP_03943499.1| T01 family HslV component of HslUV peptidase [Lactobacillus
buchneri ATCC 11577]
gi|227083323|gb|EEI18635.1| T01 family HslV component of HslUV peptidase [Lactobacillus
buchneri ATCC 11577]
Length = 185
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+K ATTI+ VR G + +AGDGQV++G+ V MK A KVRR+ G ++ GFAGS ADAF
Sbjct: 8 IKFEATTIVAVRHSGHLAMAGDGQVTMGEKVIMKGTAHKVRRIYGGKVVVGFAGSVADAF 67
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L ER EKKL QY L RS+VELA+DWR D+ L+ LEA++++ + L+++G G+V+E
Sbjct: 68 NLEERFEKKLSQYDGDLKRSAVELAQDWRGDQQLQKLEALLIVMNDKDLLLVSGQGEVIE 127
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ ++AIGSGG++AL+AA A+ SA EIA A+ IA +I ++TN N++ E +
Sbjct: 128 PDDDILAIGSGGNFALAAATAMKHNAQSMSAREIAEAAIHIAGNIDIFTNQNVISEEI 185
>gi|199599531|ref|ZP_03212919.1| ATP-dependent protease peptidase subunit [Lactobacillus rhamnosus
HN001]
gi|229552210|ref|ZP_04440935.1| T01 family HslV component of HslUV peptidase [Lactobacillus
rhamnosus LMS2-1]
gi|258508409|ref|YP_003171160.1| ATP-dependent protease peptidase subunit [Lactobacillus rhamnosus
GG]
gi|258539623|ref|YP_003174122.1| ATP-dependent protease peptidase subunit [Lactobacillus rhamnosus
Lc 705]
gi|199589572|gb|EDY97690.1| ATP-dependent protease peptidase subunit [Lactobacillus rhamnosus
HN001]
gi|229314432|gb|EEN80405.1| T01 family HslV component of HslUV peptidase [Lactobacillus
rhamnosus LMS2-1]
gi|257148336|emb|CAR87309.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
[Lactobacillus rhamnosus GG]
gi|257151299|emb|CAR90271.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
[Lactobacillus rhamnosus Lc 705]
gi|259649724|dbj|BAI41886.1| ATP-dependent protease peptidase subunit [Lactobacillus rhamnosus
GG]
Length = 174
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 127/173 (73%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI VRKDGV +AGDGQV+LG+ V MK NA+KVRR+ ++ GFAG ADAFTL +
Sbjct: 2 TTIAAVRKDGVTALAGDGQVTLGEKVIMKGNAQKVRRIYHDQVVIGFAGGVADAFTLQDW 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
EKKLE Y L RS+V LA+DWR D L+ LEAM+++ D+ L+++G G+V++P+ V
Sbjct: 62 FEKKLEHYSGNLRRSAVALAQDWRKDPTLQKLEAMMIVMDEHDLLLVSGSGEVIDPDEDV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A++ S + +IA++A++IA +I ++TNHNI++E+
Sbjct: 122 VAIGSGGNFAQAAAIAMLRHSPDMTPADIAKEAVNIAGNIDIFTNHNIIVESF 174
>gi|218961142|ref|YP_001740917.1| peptidase component of the HslUV protease [Candidatus Cloacamonas
acidaminovorans]
gi|167729799|emb|CAO80711.1| peptidase component of the HslUV protease [Candidatus Cloacamonas
acidaminovorans]
Length = 176
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 131/174 (75%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MH TTI+ + ++G I GDGQV++G ++K A+K+R++ G +I GFAG++ADAF+LL
Sbjct: 3 MHGTTIIGIHRNGKTAICGDGQVTMGDAIVKGKAQKIRKIYDGKVIVGFAGATADAFSLL 62
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E+KL+ L +++++LAKDWR D+ LR LEAM++ DK L+I G GDVLEP++
Sbjct: 63 ERFEEKLKTNKGNLKKAAIDLAKDWRQDRILRRLEAMLIAGDKDSILLINGAGDVLEPDD 122
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++AIGSGG+YAL+AARAL T+ A EIA +A++IA+ IC+YTN+N ++E +
Sbjct: 123 NIIAIGSGGNYALAAARALAHKTKLGASEIAVEALNIASGICIYTNNNYIVEEI 176
>gi|268679659|ref|YP_003304090.1| 20S proteasome A and subunit betas [Sulfurospirillum deleyianum DSM
6946]
gi|268617690|gb|ACZ12055.1| 20S proteasome A and B subunits [Sulfurospirillum deleyianum DSM
6946]
Length = 181
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 124/177 (70%), Gaps = 5/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL R D VI GDGQV+ G TV+K NA K+R+L G I+AGFAGS+ADAF L
Sbjct: 2 FEATTILACRGDKKAVIGGDGQVTFGNTVLKNNATKIRKLYNGKILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E LEQ L +S +E +K+WR DK LR LEAM+++ D +++G GDV+EPE+
Sbjct: 62 DMFENILEQKKGDLYKSVIEFSKEWRKDKMLRRLEAMMIVLDCQHIFILSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADICVYTNHNI---VLET 184
G + AIGSGG+YA+SAARAL + EE + ++++ IA+++C+YTN++I VLE+
Sbjct: 122 GKIAAIGSGGNYAISAARALDRHASLDEETLVKESLKIASELCIYTNNHIKTFVLES 178
>gi|227510441|ref|ZP_03940490.1| T01 family HslV component of HslUV peptidase [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227524592|ref|ZP_03954641.1| T01 family HslV component of HslUV peptidase [Lactobacillus
hilgardii ATCC 8290]
gi|227088267|gb|EEI23579.1| T01 family HslV component of HslUV peptidase [Lactobacillus
hilgardii ATCC 8290]
gi|227190093|gb|EEI70160.1| T01 family HslV component of HslUV peptidase [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 185
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 127/178 (71%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+K ATTI+ VR G + +AGDGQV++G+ V MK A KVRR+ G ++ GFAGS ADAF
Sbjct: 8 IKFEATTIVAVRHSGHLAMAGDGQVTMGEKVIMKGTAHKVRRIYGGKVVVGFAGSVADAF 67
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L ER EKKL QY L RS+VELA+DWR D+ L+ LEA++++ + L+++G G+V+E
Sbjct: 68 NLEERFEKKLSQYDGDLKRSAVELAQDWRGDQQLQKLEALLIVMNDKDLLLVSGQGEVIE 127
Query: 130 PENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ ++AIGSGG++AL+AA A+ + SA EIA A+ IA +I ++TN N++ E +
Sbjct: 128 PDDDILAIGSGGNFALAAATAMKHHAQSMSAREIAEAAIHIAGNIDIFTNQNVISEEI 185
>gi|237752722|ref|ZP_04583202.1| heat shock protein [Helicobacter winghamensis ATCC BAA-430]
gi|229376211|gb|EEO26302.1| heat shock protein [Helicobacter winghamensis ATCC BAA-430]
Length = 177
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 122/175 (69%), Gaps = 4/175 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + + VI GDGQV+ G V+K NA K+R L G I++GFAGS+ADAF+L
Sbjct: 2 FHATTILAYKSEKGAVIGGDGQVTFGNCVLKGNATKIRTLYHGKILSGFAGSTADAFSLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E LE LL+S +E +K+WR DKYLR LEAM+++ DK +++G GDV+EPE+
Sbjct: 62 DMFEGILENKKGDLLKSVMEFSKEWRKDKYLRRLEAMMIVLDKERIFILSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNI-VLE 183
G + AIGSGG+YALSAARA+ + +++ +++ IA ++C+YTN NI +LE
Sbjct: 122 GKIAAIGSGGNYALSAARAMDRFGSNLEPKDLVLESLKIAGELCIYTNQNIKILE 176
>gi|15606773|ref|NP_214153.1| ATP-dependent protease peptidase subunit [Aquifex aeolicus VF5]
gi|11132846|sp|O67587|HSLV_AQUAE RecName: Full=ATP-dependent protease subunit HslV
gi|2984006|gb|AAC07551.1| heat shock protein HsLV [Aquifex aeolicus VF5]
Length = 176
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 128/176 (72%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+++ ATTIL VR+DG + GDGQV+LG +V+K ARK+R+L KG +I GFAGS+AD
Sbjct: 1 MEVKATTILAVRRDGKTAVGGDGQVTLGSSVIKHTARKIRKLYKGQVIVGFAGSAADGLA 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L+ERLE KLE+Y LL++SV+LAKDWRMDKYLR LEA++L D+ L+I+G GD++EP
Sbjct: 61 LMERLEAKLEEYRGNLLKASVQLAKDWRMDKYLRRLEALLLAVDREHMLLISGNGDIIEP 120
Query: 131 ENGVMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V+AIGSGG +A +T SA EI K++ IA++IC+YTN V+E +
Sbjct: 121 DEPVLAIGSGGDYARAAALALYRNTDLSAREIVEKSLKIASEICIYTNDKFVIEEI 176
>gi|282856242|ref|ZP_06265525.1| ATP-dependent protease HslVU, peptidase subunit [Pyramidobacter
piscolens W5455]
gi|282586001|gb|EFB91286.1| ATP-dependent protease HslVU, peptidase subunit [Pyramidobacter
piscolens W5455]
Length = 180
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
V +H TTI+ VRK+G V + GDGQ++LG ++KA +KVR+L GN++ GFAG++ADA T
Sbjct: 5 VTIHGTTIVCVRKNGQVAMGGDGQMTLGNQIIKAGTKKVRKLYDGNVLVGFAGATADAMT 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L+E EKKL++Y L+R+SVELAK WR D+ L+ LEAM+L+AD+ T++++G GDV+EP
Sbjct: 65 LMELFEKKLQEYSGNLMRASVELAKMWRTDRMLQKLEAMLLVADREHTILLSGAGDVIEP 124
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
EN ++GSG YAL+AARA + + A EIA++++ IA++IC+YT++ + +E L
Sbjct: 125 ENDAASVGSGSGYALAAARAYLDVSSLDAAEIAKRSLLIASEICIYTDNILTVEVL 180
>gi|262401962|ref|ZP_06078527.1| ATP-dependent protease HslV [Vibrio sp. RC586]
gi|262351934|gb|EEZ01065.1| ATP-dependent protease HslV [Vibrio sp. RC586]
Length = 156
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/147 (56%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK NARKVRRL ++AGFAG +ADAFTL ER E KL+ + L +++VELAKDWR D+
Sbjct: 1 MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+T++L+ITG GDVL+PE+ ++AIGSGG+YA +AA AL+ +T+ A
Sbjct: 61 ALRRLEAILAVADETVSLIITGNGDVLQPEHDLIAIGSGGNYAQAAAIALLENTELDART 120
Query: 161 IARKAMSIAADICVYTNHNIVLETLKV 187
IA KA++IA DICV+TNH+ +E L++
Sbjct: 121 IAEKALNIAGDICVFTNHHHTIEELEI 147
>gi|320101719|ref|YP_004177310.1| ATP dependent peptidase CodWX, CodW component [Isosphaera pallida
ATCC 43644]
gi|319749001|gb|ADV60761.1| ATP dependent peptidase CodWX, CodW component [Isosphaera pallida
ATCC 43644]
Length = 176
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTILT R+ V + GDGQV+LG T+MKA+A K+RRL G ++ GFAG +AD L+E+
Sbjct: 5 TTILTARRGNRVALGGDGQVTLGATIMKADASKIRRLLDGKVLVGFAGGAADGLALVEKF 64
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ +P+ L R++VELAK WR D+ LR LEAM++ AD +L+I+G GDV++P +G++
Sbjct: 65 EAKLKDHPDNLPRAAVELAKLWRTDRLLRRLEAMLIAADARHSLLISGSGDVIQPNDGLV 124
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
A GSGG +AL+AARAL+ T + R+A++IAA I +YTN +++E L
Sbjct: 125 AAGSGGMFALAAARALVKHTDLDPAALVREALTIAAGIDIYTNDQLIVEEL 175
>gi|319957238|ref|YP_004168501.1| 20S proteasome a and b subunits [Nitratifractor salsuginis DSM
16511]
gi|319419642|gb|ADV46752.1| 20S proteasome A and B subunits [Nitratifractor salsuginis DSM
16511]
Length = 178
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 120/176 (68%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL R + VI GDGQV+ G TV+K NA K+R L I+AGFAGS+ADAFTL
Sbjct: 2 FEATTILAYRGENHAVIGGDGQVTFGNTVLKGNATKIRTLYHDKILAGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L + LL+S +E +K WR DK+LR LEAM+L+ +K +++G GDV+EPE+
Sbjct: 62 DMFEGILNEKRGDLLKSVIEFSKKWRQDKHLRQLEAMMLVLNKEHIFILSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + AIGSGG++ALSAARAL T A + R+++ IA ++C+YTN NI L LK
Sbjct: 122 GKIAAIGSGGNFALSAARALDRQTDLDAATLVRESLQIAGELCIYTNTNIKLLELK 177
>gi|260770841|ref|ZP_05879770.1| ATP-dependent protease HslV [Vibrio furnissii CIP 102972]
gi|260614078|gb|EEX39268.1| ATP-dependent protease HslV [Vibrio furnissii CIP 102972]
Length = 158
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 115/150 (76%), Gaps = 1/150 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK NARKVRRL ++AGFAG +ADAFTL ER E KL+ + L +++VELAKDWR D+
Sbjct: 1 MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+T +L+ITG GDVL+PE+ ++AIGSGG++A +AA AL+ +T A E
Sbjct: 61 ALRRLEAILAVADETASLIITGNGDVLQPEHDLIAIGSGGNFAQAAAIALLENTDLDARE 120
Query: 161 IARKAMSIAADICVYTNHNIVLETLKVGDE 190
IA+KA+ IA DICV+TNH+ +E L++ E
Sbjct: 121 IAQKALKIAGDICVFTNHHHTIEELEIPPE 150
>gi|297566079|ref|YP_003685051.1| 20S proteasome subunits A/B [Meiothermus silvanus DSM 9946]
gi|296850528|gb|ADH63543.1| 20S proteasome A and B subunits [Meiothermus silvanus DSM 9946]
Length = 182
Score = 174 bits (442), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 124/170 (72%), Gaps = 2/170 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAFT 70
MHATTIL VRK+G IAGDGQV+LGQT+MK +A KVRRL G+ I+ GFAG+ ADA T
Sbjct: 3 PMHATTILAVRKNGQTAIAGDGQVTLGQTIMKTSAIKVRRLEVGSGILVGFAGAVADALT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LLE+ E+ L L R++VE K WR D+ LRNLEAM+++AD L+++G G+VL P
Sbjct: 63 LLEKFEEALGIAKGNLPRAAVETVKRWRTDRVLRNLEAMLIVADVENLLLLSGNGEVLSP 122
Query: 131 ENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHN 179
+ V+A+GSGG YALSAA+AL+ ++ A +IAR+++ IA +I +YT N
Sbjct: 123 DEPVLAVGSGGPYALSAAKALLRYSELPAADIARESIQIAGEIDLYTTGN 172
>gi|262166684|ref|ZP_06034421.1| ATP-dependent protease HslV [Vibrio mimicus VM223]
gi|262170393|ref|ZP_06038071.1| ATP-dependent protease HslV [Vibrio mimicus MB-451]
gi|261891469|gb|EEY37455.1| ATP-dependent protease HslV [Vibrio mimicus MB-451]
gi|262026400|gb|EEY45068.1| ATP-dependent protease HslV [Vibrio mimicus VM223]
Length = 156
Score = 174 bits (441), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 113/147 (76%), Gaps = 1/147 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK NARKVRRL ++AGFAG +ADAFTL ER E KL+ + L +++VELAKDWR D+
Sbjct: 1 MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+T +L+ITG GDVL+PE+ ++AIGSGG+YA +AA AL+ +T A
Sbjct: 61 ALRRLEAILAVADETASLIITGNGDVLQPEHDLIAIGSGGNYAQAAAIALLENTDLDART 120
Query: 161 IARKAMSIAADICVYTNHNIVLETLKV 187
IA KA++IA DICV+TNHN +E L++
Sbjct: 121 IAEKALNIAGDICVFTNHNHTIEELEI 147
>gi|237749803|ref|ZP_04580283.1| ATP-dependent protease subunit HslV/ClpQ [Helicobacter bilis ATCC
43879]
gi|229374553|gb|EEO24944.1| ATP-dependent protease subunit HslV/ClpQ [Helicobacter bilis ATCC
43879]
Length = 182
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 124/176 (70%), Gaps = 6/176 (3%)
Query: 13 MHATTILTV--RKDG--VVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
HATTIL +KDG VI GDGQVS G VMK NA K+R L G I++GFAGS+ADA
Sbjct: 2 FHATTILGYVGQKDGKPYGVIGGDGQVSFGNCVMKGNATKIRSLYNGKILSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE LL+S +E +K+WR DKYLR LEAM+++ + T V++G GDV+
Sbjct: 62 FSLFDMFERILEGKKGDLLKSVMEFSKEWRKDKYLRRLEAMMIVLNATHIYVLSGTGDVV 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMSTQNSA-EEIARKAMSIAADICVYTNHNIVL 182
EPE+G + AIGSGG+YALSAARAL + A +++ +++ IA +IC+YTN NI L
Sbjct: 122 EPEDGKIAAIGSGGNYALSAARALDKFSDIAPKDLVLESLKIAGEICIYTNTNIKL 177
>gi|157363638|ref|YP_001470405.1| ATP-dependent protease peptidase subunit [Thermotoga lettingae TMO]
gi|189036247|sp|A8F5A7|HSLV_THELT RecName: Full=ATP-dependent protease subunit HslV
gi|157314242|gb|ABV33341.1| 20S proteasome A and B subunits [Thermotoga lettingae TMO]
Length = 176
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 125/176 (71%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
++ +TT+L V ++G V+AGDGQV+ G TVMK ARK+R++G G ++AGFAGS ADA
Sbjct: 1 MEWKSTTVLVVSRNGKTVMAGDGQVTYGNTVMKHGARKIRKIGDGQVLAGFAGSVADAMA 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L +R E KL+++ L +++VELAKDWR D+ LR LEA++L+AD+ L+I+G G+V++P
Sbjct: 61 LFDRFESKLKEWGGNLTKAAVELAKDWRTDRVLRRLEALLLVADRDNVLIISGTGEVVQP 120
Query: 131 ENGVMAIGSG-GSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++ V AIGSG +A + +T A EI K+M IA++IC+YTN NI +E +
Sbjct: 121 DDNVAAIGSGAPYAIAAARALIRNTDLDAREIVEKSMQIASEICIYTNGNITIEEI 176
>gi|227535112|ref|ZP_03965161.1| T01 family HslV component of HslUV peptidase [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|239631510|ref|ZP_04674541.1| ATP-dependent protease hslV [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|227187253|gb|EEI67320.1| T01 family HslV component of HslUV peptidase [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|239525975|gb|EEQ64976.1| ATP-dependent protease hslV [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 176
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 128/176 (72%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
M TTI VRKDGV +AGDGQV+LG+ V MK NA+KVRR+ ++ GFAG ADAFTL
Sbjct: 1 MTMTTIAAVRKDGVTALAGDGQVTLGEKVIMKGNAQKVRRIYHDQVVIGFAGGVADAFTL 60
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ EKKLE Y L RS+V LA+DWR D L+ LEAM+++ D+ L+++G G+V++P+
Sbjct: 61 QDWFEKKLEHYAGNLRRSAVALAQDWRKDPTLQKLEAMMIVMDEHDLLLVSGSGEVIDPD 120
Query: 132 NGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+AIGSGG++A +AA A++ + + +IA++A++IA +I ++TNHN+++E+
Sbjct: 121 EDVVAIGSGGNFAQAAAIAMLRHAPDMTPADIAKEAVNIAGNIDIFTNHNVIVESF 176
>gi|116494890|ref|YP_806624.1| ATP-dependent protease peptidase subunit [Lactobacillus casei ATCC
334]
gi|191638401|ref|YP_001987567.1| ATP-dependent protease peptidase subunit [Lactobacillus casei BL23]
gi|301066450|ref|YP_003788473.1| ATP-dependent protease HslVU peptidase subunit [Lactobacillus casei
str. Zhang]
gi|122263692|sp|Q039E0|HSLV_LACC3 RecName: Full=ATP-dependent protease subunit HslV
gi|238693038|sp|B3WEA8|HSLV_LACCB RecName: Full=ATP-dependent protease subunit HslV
gi|116105040|gb|ABJ70182.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Lactobacillus casei ATCC 334]
gi|190712703|emb|CAQ66709.1| ATP-dependent protease hslV [Lactobacillus casei BL23]
gi|300438857|gb|ADK18623.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Lactobacillus casei str. Zhang]
gi|327382430|gb|AEA53906.1| HslV [Lactobacillus casei LC2W]
gi|327385629|gb|AEA57103.1| HslV [Lactobacillus casei BD-II]
Length = 174
Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 127/173 (73%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI VRKDGV +AGDGQV+LG+ V MK NA+KVRR+ ++ GFAG ADAFTL +
Sbjct: 2 TTIAAVRKDGVTALAGDGQVTLGEKVIMKGNAQKVRRIYHDQVVIGFAGGVADAFTLQDW 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
EKKLE Y L RS+V LA+DWR D L+ LEAM+++ D+ L+++G G+V++P+ V
Sbjct: 62 FEKKLEHYAGNLRRSAVALAQDWRKDPTLQKLEAMMIVMDEHDLLLVSGSGEVIDPDEDV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A++ + + +IA++A++IA +I ++TNHN+++E+
Sbjct: 122 VAIGSGGNFAQAAAIAMLRHAPDMTPADIAKEAVNIAGNIDIFTNHNVIVESF 174
>gi|154346210|ref|XP_001569042.1| hs1vu complex proteolytic subunit-like [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066384|emb|CAM44175.1| hs1vu complex proteolytic subunit-like,threonine peptidase, Clan
T(1), family T1B [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 217
Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 130/179 (72%), Gaps = 4/179 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
AV+ +TTIL+VRK V++ GD QV+LG+ ++ K++A K+R+L N+ GFAGS+ADA
Sbjct: 17 AVQRRSTTILSVRKGNKVILIGDRQVTLGERIVAKSSACKLRKLND-NVAIGFAGSTADA 75
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F L+E+LE KL +P+QL R++VELAKDWR D+ LR LEA +++ K TL I G G+V+
Sbjct: 76 FALMEKLENKLNDFPDQLSRAAVELAKDWRTDRALRRLEASLIVCSKEETLEIDGQGNVI 135
Query: 129 EP-ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
P E+G++AIGSGG+YA +AARAL+ AE IA KAM IA DI V++N N +E L
Sbjct: 136 TPEEDGIIAIGSGGTYAKAAARALIDVDGYDAERIALKAMKIATDIDVFSNSNWDVEML 194
>gi|289667445|ref|ZP_06488520.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
pv. musacearum NCPPB4381]
Length = 183
Score = 173 bits (439), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 136/175 (77%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
+HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 VHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+G GDV+EPE
Sbjct: 70 FGLFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIISGTGDVIEPE 128
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSY +A L T+ A IA +A++IA DIC+YTN N+V+E L
Sbjct: 129 DGIIAIGSGGSYALSAARALLAHTELDARTIATEAINIAGDICIYTNRNVVVEEL 183
>gi|288573039|ref|ZP_06391396.1| 20S proteasome A and B subunits [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288568780|gb|EFC90337.1| 20S proteasome A and B subunits [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 175
Score = 173 bits (439), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL VR+ V +AGDGQ++LG ++K+N KVRRL G ++AGFAGS+ADA TLL
Sbjct: 2 FEGTTILCVRQGDKVAMAGDGQMTLGNQIIKSNTVKVRRLHGGTVLAGFAGSTADAMTLL 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E EKKLE++ L+R++VEL K WR D+ LR LEAM+L+AD++ T++++G GD++EPE+
Sbjct: 62 ELFEKKLEEHGGNLMRAAVELGKQWRTDRMLRRLEAMMLVADRSHTILLSGAGDIIEPEH 121
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSG +YAL+AARA M A++IARK++ IA+ IC+YT+ I +E L
Sbjct: 122 DAAAIGSGSAYALAAARAYMECSGWDADKIARKSLEIASSICIYTDDVISMEVL 175
>gi|262170080|ref|ZP_06037769.1| ATP-dependent protease HslV [Vibrio cholerae RC27]
gi|262191442|ref|ZP_06049629.1| ATP-dependent protease HslV [Vibrio cholerae CT 5369-93]
gi|262021488|gb|EEY40200.1| ATP-dependent protease HslV [Vibrio cholerae RC27]
gi|262032682|gb|EEY51233.1| ATP-dependent protease HslV [Vibrio cholerae CT 5369-93]
Length = 158
Score = 173 bits (439), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/147 (56%), Positives = 114/147 (77%), Gaps = 1/147 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK NARKVRRL ++AGFAG +ADAFTL ER E KL+ + L +++VELAKDWR D+
Sbjct: 1 MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+T +L+ITG GDVL+PE+ ++AIGSGG+YA +AA AL+ +T+ A
Sbjct: 61 ALRRLEAILAVADETASLIITGNGDVLQPEHDLIAIGSGGNYAQAAAIALLENTELDART 120
Query: 161 IARKAMSIAADICVYTNHNIVLETLKV 187
IA KA++IA DICV+TNH+ +E L++
Sbjct: 121 IAEKALNIAGDICVFTNHHHTIEELEI 147
>gi|261211241|ref|ZP_05925530.1| ATP-dependent protease HslV [Vibrio sp. RC341]
gi|260839742|gb|EEX66353.1| ATP-dependent protease HslV [Vibrio sp. RC341]
Length = 156
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/147 (56%), Positives = 114/147 (77%), Gaps = 1/147 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK NARKVRRL ++AGFAG +ADAFTL ER E KL+ + L +++VELAKDWR D+
Sbjct: 1 MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+T +L+ITG GDVL+PE+ ++AIGSGG+YA +AA AL+ +T+ A
Sbjct: 61 ALRRLEAILAVADETASLIITGNGDVLQPEHDLIAIGSGGNYAQAAAIALLENTELDART 120
Query: 161 IARKAMSIAADICVYTNHNIVLETLKV 187
IA KA++IA DICV+TNH+ +E L++
Sbjct: 121 IAEKALNIAGDICVFTNHHHTIEELEI 147
>gi|188586010|ref|YP_001917555.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
family T01B [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350697|gb|ACB84967.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
family T01B [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 181
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 127/180 (70%), Gaps = 3/180 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI + D IAGDGQ+++GQ T+ K +A+K+ +L KG ++AGFAGS ADA TL
Sbjct: 2 LDGTTIAACKTDKGTAIAGDGQITMGQNTIFKQSAKKIWKLYKGEVLAGFAGSVADAMTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLEQ L ++SVELAK+WR DK LR LEA++L+A+ +I+G G+++EP+
Sbjct: 62 FERFEHKLEQEKGNLSKASVELAKEWRSDKVLRRLEALLLVANLDKMFIISGSGEIIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAE-EIARKAMSIAADICVYTNHNIVLETLKV-GD 189
+ V AIGSGG+YALSA + L + A E+A +A++ AA+ICVYTN +I +E L+ GD
Sbjct: 122 DNVAAIGSGGAYALSALKMLSKHSDLAPGEMACEALNTAAEICVYTNSHISVEELRAQGD 181
>gi|224418106|ref|ZP_03656112.1| ATP-dependent protease peptidase subunit [Helicobacter canadensis
MIT 98-5491]
gi|253827433|ref|ZP_04870318.1| ATP-dependent protease peptidase subunit [Helicobacter canadensis
MIT 98-5491]
gi|313141641|ref|ZP_07803834.1| ATP-dependent protease HslVU [Helicobacter canadensis MIT 98-5491]
gi|253510839|gb|EES89498.1| ATP-dependent protease peptidase subunit [Helicobacter canadensis
MIT 98-5491]
gi|313130672|gb|EFR48289.1| ATP-dependent protease HslVU [Helicobacter canadensis MIT 98-5491]
Length = 178
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 121/176 (68%), Gaps = 5/176 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + + VI GDGQV+ G V+K NA K+R L G I++GFAGS+ADAF+L
Sbjct: 2 FEATTILAYKTENGAVIGGDGQVTFGNCVLKGNATKIRTLYHGQILSGFAGSTADAFSLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E LE LL+S +E +K+WR DKYLR LEAM+++ +K +++G GDV+EPE+
Sbjct: 62 DMFEGILENKKGDLLKSVIEFSKEWRKDKYLRRLEAMMIVLNKEKIFILSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNI-VLE 183
G + AIGSGG+YALSAARAL Q +++ +++ IA ++C+YTN NI +LE
Sbjct: 122 GRIAAIGSGGNYALSAARALDRFGGGQMQPKDLVLESLKIAGELCIYTNQNIKILE 177
>gi|269792952|ref|YP_003317856.1| 20S proteasome A and B subunits [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100587|gb|ACZ19574.1| 20S proteasome A and B subunits [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 178
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 128/174 (73%), Gaps = 2/174 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TT++ VR+ G V +AGDGQV+LG V+K ARKVRRL K +++AGFAGS+ADA TL
Sbjct: 4 LKGTTVVCVRRGGRVAMAGDGQVTLGAQVVKTRARKVRRL-KWDVLAGFAGSTADAMTLF 62
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E+ L+ + +LR+SVEL K+WR D+ LR LEAM+L+AD TL+++G GDVLE E
Sbjct: 63 ERFERALDAHKGDVLRASVELVKEWRTDRVLRRLEAMMLVADLDRTLLLSGAGDVLEMEE 122
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+IGSG YAL+AARAL+ T A +AR+++ IAA+IC+YTN N+ LE +
Sbjct: 123 MCASIGSGSGYALAAARALLEGTDWDAPAVARRSLEIAAEICIYTNSNVTLEEI 176
>gi|169830787|ref|YP_001716769.1| ATP-dependent protease peptidase subunit [Candidatus Desulforudis
audaxviator MP104C]
gi|238065854|sp|B1I260|HSLV_DESAP RecName: Full=ATP-dependent protease subunit HslV
gi|169637631|gb|ACA59137.1| 20S proteasome, A and B subunits [Candidatus Desulforudis
audaxviator MP104C]
Length = 177
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ V++DG V +AGDGQV LG ++K +A K+RRL K ++AGFAGS ADAF L
Sbjct: 3 FKGTTIVAVKRDGAVALAGDGQVGLGNGIIVKRDAVKLRRLYKDRVVAGFAGSVADAFAL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE+ L R++V+LAKDWR DKYLR LEA++++AD+ L+I+G G+V+EP+
Sbjct: 63 FERFEGKLEESQGNLRRAAVQLAKDWRTDKYLRRLEALLVVADREAVLLISGGGEVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++A+GSGG++AL+AARAL T A +IAR+A+ IA+ ICV+TN I +E +
Sbjct: 123 DGIIAVGSGGAFALAAARALARHTALPAVDIAREALQIASQICVHTNDRITVEQV 177
>gi|58428210|gb|AAW77247.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
oryzae pv. oryzae KACC10331]
Length = 190
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 136/175 (77%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
+HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 17 VHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFAGAAADAFTL 76
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+G GDV+EPE
Sbjct: 77 FELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIISGTGDVIEPE 135
Query: 132 NGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG +A L T+ A+ IA +A++IA DIC+YTN N+V+E L
Sbjct: 136 DGIIAIGSGGAYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVVVEEL 190
>gi|84625421|ref|YP_452793.1| ATP-dependent protease peptidase subunit [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|122879308|ref|YP_202632.6| ATP-dependent protease peptidase subunit [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|229358032|ref|YP_001912064.2| ATP-dependent protease peptidase subunit [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|123520883|sp|Q2NYV8|HSLV_XANOM RecName: Full=ATP-dependent protease subunit HslV
gi|84369361|dbj|BAE70519.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
oryzae pv. oryzae MAFF 311018]
Length = 183
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 136/175 (77%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
+HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 VHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+G GDV+EPE
Sbjct: 70 FELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIISGTGDVIEPE 128
Query: 132 NGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG +A L T+ A+ IA +A++IA DIC+YTN N+V+E L
Sbjct: 129 DGIIAIGSGGAYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVVVEEL 183
>gi|325108995|ref|YP_004270063.1| ATP dependent peptidase CodWX, CodW component [Planctomyces
brasiliensis DSM 5305]
gi|324969263|gb|ADY60041.1| ATP dependent peptidase CodWX, CodW component [Planctomyces
brasiliensis DSM 5305]
Length = 188
Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 132/180 (73%), Gaps = 2/180 (1%)
Query: 8 HYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
HY + +TTILTVRK V IAGDGQV+ G ++K + RK+RR+ GN++ GFAGS+A
Sbjct: 6 HYLRQTARSTTILTVRKGNQVAIAGDGQVTYGDAILKQDTRKIRRILDGNVLVGFAGSTA 65
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAF+LLER E K + +P + R++ ELA+DWR D+ LR LEAM+++ + +L++TG GD
Sbjct: 66 DAFSLLERFETKAKDFPGNIPRAATELARDWRTDRVLRKLEAMMVVINAEHSLLVTGQGD 125
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ P++G++ IGSGG+YA++AARAL + SA E+ ++ IA++I +YTN N+++E L
Sbjct: 126 VVSPQDGIIGIGSGGNYAVAAARALTRYSDLSAREVVENSLKIASEIDIYTNDNLIVEEL 185
>gi|296273491|ref|YP_003656122.1| 20S proteasome subunits AB [Arcobacter nitrofigilis DSM 7299]
gi|296097665|gb|ADG93615.1| 20S proteasome A and B subunits [Arcobacter nitrofigilis DSM 7299]
Length = 178
Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 122/179 (68%), Gaps = 4/179 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + VI GDGQV+ G TV+K NA K+R L K I+AGFAGS+ADAF L
Sbjct: 2 FDATTILAYKAKDKAVIGGDGQVTFGNTVLKGNATKIRTLYKDKILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E LE LL++ + +K+WR DK LR LEAM+++ +K +++G GDV+EPE+
Sbjct: 62 DMFESHLENTKGDLLKAVIAFSKEWRKDKVLRRLEAMMIVLNKEHIFILSGTGDVVEPED 121
Query: 133 GVMA-IGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
G++A IGSGG++A+SAARAL N E++ ++++ IA ++C+YTN NI L LK+ D
Sbjct: 122 GMIASIGSGGNFAISAARALQKHSNLDPEDLVKESLMIAGELCIYTNQNIKL--LKIED 178
>gi|313901987|ref|ZP_07835403.1| ATP dependent peptidase CodWX, CodW component [Thermaerobacter
subterraneus DSM 13965]
gi|313467776|gb|EFR63274.1| ATP dependent peptidase CodWX, CodW component [Thermaerobacter
subterraneus DSM 13965]
Length = 182
Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 128/176 (72%), Gaps = 2/176 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H TTIL VR++G V +AGDGQV+L Q VMK ARKVRRL G ++AGFAGS ADA
Sbjct: 7 RFHGTTILAVRRNGRVAMAGDGQVTLQQHMVMKHRARKVRRLYHGRVLAGFAGSVADAVA 66
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L+ER E KLE++ QL+R++VELAKDWR D+ LR LEA++++AD L+++G G+VLEP
Sbjct: 67 LMERFEGKLEEHGGQLVRAAVELAKDWRTDRLLRRLEALLVVADADHLLLVSGSGEVLEP 126
Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++A+GSGG + +A T A I R+AM IAA++CVYTN +V+E L
Sbjct: 127 DDGIVAVGSGGGFALAAARALARHTGLDAAAICREAMRIAAELCVYTNDQLVIEEL 182
>gi|118382535|ref|XP_001024425.1| peptidase, T1 family protein [Tetrahymena thermophila]
gi|89306192|gb|EAS04180.1| peptidase, T1 family protein [Tetrahymena thermophila SB210]
Length = 229
Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 124/177 (70%), Gaps = 7/177 (3%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K TTIL V+K+ + I GDGQVSLG TV+K + RKVR+L G+ I GFAGS ADAFTL
Sbjct: 28 KWRQTTILAVKKNNEICIVGDGQVSLGSTVVKTDGRKVRKLANGS-ICGFAGSLADAFTL 86
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE-P 130
+E LE + + P L++ + AK WR K LR+LEA +L+ DK + + + G G+VLE P
Sbjct: 87 MEGLENIMTKQPT--LKACITYAKQWRTGKALRHLEATLLVVDKDLIVELDGTGNVLEIP 144
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
E V+ IGSGG++A AARAL+ SA++IA K+M IAAD C+YTNHN V+ETLK
Sbjct: 145 E--VIGIGSGGAFAECAARALIDIDGMSAKDIALKSMKIAADKCIYTNHNWVVETLK 199
>gi|262041702|ref|ZP_06014894.1| ATP-dependent protease HslVU [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330004457|ref|ZP_08304951.1| ATP-dependent protease HslVU, peptidase subunit [Klebsiella sp. MS
92-3]
gi|259040964|gb|EEW42043.1| ATP-dependent protease HslVU [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328536615|gb|EGF62942.1| ATP-dependent protease HslVU, peptidase subunit [Klebsiella sp. MS
92-3]
Length = 149
Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/145 (56%), Positives = 109/145 (75%), Gaps = 1/145 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L++++VELAKDWR D+
Sbjct: 1 MKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSGG YA +AARAL+ +T A +
Sbjct: 61 MLRKLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTDMGARD 120
Query: 161 IARKAMSIAADICVYTNHNIVLETL 185
IA KA+ IA DIC+YTNH +E L
Sbjct: 121 IAEKALDIAGDICIYTNHFHTIEEL 145
>gi|242309066|ref|ZP_04808221.1| heat shock protein [Helicobacter pullorum MIT 98-5489]
gi|239524490|gb|EEQ64356.1| heat shock protein [Helicobacter pullorum MIT 98-5489]
Length = 178
Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 119/176 (67%), Gaps = 5/176 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + + VI GDGQV+ G V+K NA K+R L G I++GFAGS+ADAFTL
Sbjct: 2 FEATTILAYKTEKGAVIGGDGQVTFGNCVLKGNATKIRTLYHGKILSGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E LE LL+S +E +K+WR DKYLR LEAM+++ DK +++G GDV+EPE+
Sbjct: 62 DMFEGILENKKGDLLKSVMEFSKEWRKDKYLRRLEAMMIVLDKEKIFILSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNI-VLE 183
G + AIGSGG+YALSAARAL ++ +++ IA ++C+YTN NI +LE
Sbjct: 122 GKIAAIGSGGNYALSAARALDRFGKGDMEPRDLVLESLKIAGELCIYTNQNIKILE 177
>gi|74025044|ref|XP_829088.1| HslVU complex proteolytic subunit [Trypanosoma brucei TREU927]
gi|70834474|gb|EAN79976.1| hslVU complex proteolytic subunit, putative [Trypanosoma brucei]
gi|261335037|emb|CBH18031.1| hslVU complex proteolytic subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 209
Score = 171 bits (432), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 133/180 (73%), Gaps = 4/180 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
A ++ TTIL+VRK VV+ GD QV+LG+ ++ K++A K+RR+ +++ GFAGS+ADA
Sbjct: 14 ACQLRHTTILSVRKGDTVVLLGDRQVTLGERIVAKSSACKLRRIND-DVVIGFAGSTADA 72
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
+L+E+LE K+ ++PNQL R++VELAK+WR D+ LR LEA +++ TL I G G+V+
Sbjct: 73 ISLMEKLENKIGEFPNQLTRAAVELAKEWRTDRALRRLEASLIVCSAEETLEIDGQGNVI 132
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
PE +G++AIGSGG++A +AARAL+ AE+IARKAM IA DI V++N + +E LK
Sbjct: 133 TPEADGIVAIGSGGTFAKAAARALIDVDGYDAEKIARKAMRIATDIDVFSNEHWDVEVLK 192
>gi|160903078|ref|YP_001568659.1| ATP-dependent protease peptidase subunit [Petrotoga mobilis SJ95]
gi|189036230|sp|A9BI45|HSLV_PETMO RecName: Full=ATP-dependent protease subunit HslV
gi|160360722|gb|ABX32336.1| 20S proteasome A and B subunits [Petrotoga mobilis SJ95]
Length = 177
Score = 171 bits (432), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 131/175 (74%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL V+++G VI GDGQV++G+T+ K NA+KVRRLG+G +I+GFAGS ADA L
Sbjct: 3 FHGTTILGVKRNGKTVICGDGQVTMGETIFKGNAKKVRRLGEGKVISGFAGSVADALALY 62
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E K + L++++VEL K+WRMDK LR LEA++L+ADK +I+G G+V+EP+
Sbjct: 63 ERFEGKYKSSHGNLMKAAVELTKEWRMDKALRRLEALLLVADKENIFLISGNGEVMEPQE 122
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+AIGSGG YA +AA AL+ +T AEEIA+KA+ IA +IC+YTN NI +E ++
Sbjct: 123 DAIAIGSGGPYAYAAAMALLRNTDLDAEEIAQKAIKIAGEICIYTNDNITMEIIE 177
>gi|302389651|ref|YP_003825472.1| ATP dependent peptidase CodWX, CodW component [Thermosediminibacter
oceani DSM 16646]
gi|302200279|gb|ADL07849.1| ATP dependent peptidase CodWX, CodW component [Thermosediminibacter
oceani DSM 16646]
Length = 176
Score = 170 bits (431), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 128/175 (73%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
ATTI+ V IAGDGQV+ G+ T+MK +A+K+R++ G ++AGFAGS ADA TL
Sbjct: 2 FSATTIVAVVNKKGAAIAGDGQVTFGENTIMKHHAKKIRKIYNGRVLAGFAGSVADAVTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE++ L+R++VELAK+WR D+ LR LEA+++ AD+ L+I+G G+V+EP+
Sbjct: 62 FEKFEGKLEEFHGNLVRAAVELAKEWRTDRMLRKLEALLIAADREHILIISGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG YAL+AARAL T AE+I +A+ IAADICVYTN I +E L
Sbjct: 122 DGIAAIGSGGPYALAAARALARFTDLPAEKIVEEALKIAADICVYTNDFISVEAL 176
>gi|166710519|ref|ZP_02241726.1| ATP-dependent protease peptidase subunit [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 183
Score = 170 bits (431), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 135/175 (77%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
+HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG+ G ++AGFAG++ADAFTL
Sbjct: 10 VHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFAGAAADAFTL 69
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I G GDV+EPE
Sbjct: 70 FELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIGGTGDVIEPE 128
Query: 132 NGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG +A L T+ A+ IA +A++IA DIC+YTN N+V+E L
Sbjct: 129 DGIIAIGSGGAYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVVVEEL 183
>gi|284008946|emb|CBA75817.1| ATP-dependent protease HslV (heat shock protein) [Arsenophonus
nasoniae]
Length = 154
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/150 (58%), Positives = 116/150 (77%), Gaps = 1/150 (0%)
Query: 37 LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD 96
+G TVMK N RKVRRL +IAGFAG +ADAFTL E E+KLE + L +++VELAKD
Sbjct: 1 MGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELFERKLELHQGHLTKAAVELAKD 60
Query: 97 WRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQ 155
WR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSGG+YA +AARAL+ +T+
Sbjct: 61 WRTDRMLRKLEALLAVADENSSLIITGNGDVIQPENDLIAIGSGGAYAQAAARALLENTE 120
Query: 156 NSAEEIARKAMSIAADICVYTNHNIVLETL 185
SA +I KA++IA+DIC+YTNHN E L
Sbjct: 121 MSARDITEKALNIASDICIYTNHNFNFEEL 150
>gi|313680129|ref|YP_004057868.1| ATP dependent peptidase codwx, codw component [Oceanithermus
profundus DSM 14977]
gi|313152844|gb|ADR36695.1| ATP dependent peptidase CodWX, CodW component [Oceanithermus
profundus DSM 14977]
Length = 177
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 124/177 (70%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MH TTIL V KDG IAGDGQV+ G TVMK A KVR+L + +++ GFAG+ ADA TLL
Sbjct: 1 MHGTTILAVHKDGETAIAGDGQVTFGDTVMKQGAVKVRKL-EDDVLVGFAGAVADALTLL 59
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E++LE L R++VE K WR D+ LR LEAM+++AD L+++G G+V+ P+
Sbjct: 60 EKFEEQLEIAKGSLKRAAVETVKLWRTDRILRQLEAMLIVADAREILLLSGTGEVIAPDE 119
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
++A+GSG YALSAA+AL T+ A EIA KA+ IAA+I +YTN N + L+VG
Sbjct: 120 PLVAVGSGAPYALSAAKALYRETRLGAAEIAEKALGIAAEIDLYTNGNATV--LRVG 174
>gi|225025432|ref|ZP_03714624.1| hypothetical protein EIKCOROL_02330 [Eikenella corrodens ATCC
23834]
gi|224941716|gb|EEG22925.1| hypothetical protein EIKCOROL_02330 [Eikenella corrodens ATCC
23834]
Length = 177
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI++VR+ G V I GDGQVSLG T++KA ARKVR+L ++AGFAG +ADAFTL
Sbjct: 3 QFDGTTIVSVRRGGQVAIGGDGQVSLGNTIIKATARKVRKLYNNTVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+E E KL+++ +L S++ELAK+WR D+ LR LEAM+++ADK TL+ITG GDVLEPE
Sbjct: 63 IELFEAKLQKHQGRLTVSAIELAKEWRTDRALRRLEAMLIVADKDNTLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ AIGSGG++A +AARALM +T+ E + +KA+ IA IC+YTN +ETL
Sbjct: 123 GGIAAIGSGGAFAQAAARALMENTELPPETVVKKALEIAGSICIYTNDQHTVETL 177
>gi|260583821|ref|ZP_05851569.1| heat shock protein HslV [Granulicatella elegans ATCC 700633]
gi|260158447|gb|EEW93515.1| heat shock protein HslV [Granulicatella elegans ATCC 700633]
Length = 175
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 127/174 (72%), Gaps = 4/174 (2%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V+K IAGDGQ+++G+ +MK +ARK+RR+ G ++ GFAG ADA TL E
Sbjct: 2 TTICAVKKGNQSAIAGDGQITMGERIIMKGSARKIRRIFGGEVVVGFAGGVADAITLEEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E +L+Q+ L R+++ELAK WR D+ L+ LEAM+++ +K L+++G G+V+EP++G+
Sbjct: 62 FEDQLKQFKGNLQRAAIELAKQWRTDRTLQKLEAMLIVMNKDQLLLVSGTGEVIEPDDGI 121
Query: 135 MAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
+ IGSGG++ALSAARAL+ + SAE+IAR+++ +A++I VYTN I+ E +
Sbjct: 122 LTIGSGGNFALSAARALLRFGDENLSAEDIARESLKVASEIDVYTNDAIITEVV 175
>gi|331701474|ref|YP_004398433.1| ATP-dependent protease hslV [Lactobacillus buchneri NRRL B-30929]
gi|329128817|gb|AEB73370.1| ATP-dependent protease hslV [Lactobacillus buchneri NRRL B-30929]
Length = 180
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+K ATTI+ VR +G + +AGDGQV++G+ V MK A KVR + ++ GFAGS ADAF
Sbjct: 3 IKFEATTIVAVRHNGHLAMAGDGQVTMGEKVIMKGTAHKVRLIYDNQVVVGFAGSVADAF 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L ER EKKL Q+ L RS+VELA++WR D+ L+ LEA++++ + L+++G G+V+E
Sbjct: 63 NLEERFEKKLNQFDGDLKRSAVELAQEWRGDQQLQKLEALLIVMNDKDLLLVSGQGEVIE 122
Query: 130 PENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ ++AIGSGG++AL+AA A+ + SA EIA A+ IA +I ++TN N++ E L
Sbjct: 123 PDDDILAIGSGGNFALAAATAMKHHAQDMSAREIAEAAIHIAGNIDIFTNQNVISEEL 180
>gi|149919852|ref|ZP_01908328.1| ATP-dependent protease peptidase subunit [Plesiocystis pacifica
SIR-1]
gi|149819299|gb|EDM78732.1| ATP-dependent protease peptidase subunit [Plesiocystis pacifica
SIR-1]
Length = 179
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 127/173 (73%), Gaps = 2/173 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ +TT+L VR+DG V + DGQVS+G T++K +A KVR L +G I+AGFAGS+AD TL
Sbjct: 2 IRSTTVLCVRRDGRVALGADGQVSMGNTIVKGSASKVRALARGKILAGFAGSAADGLTLC 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E LE KLE R+ VELAKDWR+D+ R LEA++++ADK +L+++G GDV+E E+
Sbjct: 62 ELLEAKLEAVGGNFTRACVELAKDWRLDRRYRRLEALLIVADKDRSLLLSGTGDVIEAED 121
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHN-IVLE 183
G++AIGSGG+YAL+AARAL+ ++ A + + +A +ICV+TNH+ VLE
Sbjct: 122 GILAIGSGGNYALAAARALLRHSEMDARGLVEAGLQVAGEICVFTNHSATVLE 174
>gi|116492726|ref|YP_804461.1| ATP-dependent protease peptidase subunit [Pediococcus pentosaceus
ATCC 25745]
gi|122265810|sp|Q03FK3|HSLV_PEDPA RecName: Full=ATP-dependent protease subunit HslV
gi|116102876|gb|ABJ68019.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Pediococcus pentosaceus ATCC 25745]
Length = 184
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 128/182 (70%), Gaps = 3/182 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
VK ATTI+ + +G +AGDGQV++G+ +MK ARKVRR+ G +I GFAGS ADAF
Sbjct: 3 VKFDATTIIAISHNGENAMAGDGQVTMGEKFIMKGTARKVRRIYDGKVIVGFAGSVADAF 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L E+ EKKL +Y L R+SVELAK WR D+ L+ LEAM+++ D+ +++G G+V+
Sbjct: 63 NLEEKFEKKLSEYSGNLQRASVELAKIWRGDQQLQKLEAMLIVMDEKEMYLVSGSGEVIA 122
Query: 130 PENGVMAIGSGGSY--ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
P++G++AIGSGG++ A + A +TQ SA+E+A+ A+++A DI ++TNHN++ K
Sbjct: 123 PDDGILAIGSGGNFALAAAKALKKHATQVSAKEMAKTAINVAGDIDIFTNHNVIALDFKE 182
Query: 188 GD 189
D
Sbjct: 183 ED 184
>gi|320155144|ref|YP_004187523.1| ATP-dependent protease HslV [Vibrio vulnificus MO6-24/O]
gi|319930456|gb|ADV85320.1| ATP-dependent protease HslV [Vibrio vulnificus MO6-24/O]
Length = 157
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 116/150 (77%), Gaps = 1/150 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK NARKVRRL ++AGFAG +ADAFTL ER E KL+ + L +++VELAKDWR D+
Sbjct: 1 MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG+YA +AA AL+ +T+ A E
Sbjct: 61 ALRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGAYAQAAATALLENTELDARE 120
Query: 161 IARKAMSIAADICVYTNHNIVLETLKVGDE 190
IA KA++IA DICV+TNHN +E L++ E
Sbjct: 121 IAEKALNIAGDICVFTNHNHTIEELEIPAE 150
>gi|297624296|ref|YP_003705730.1| 20S proteasome A and subunit Bs [Truepera radiovictrix DSM 17093]
gi|297165476|gb|ADI15187.1| 20S proteasome A and B subunits [Truepera radiovictrix DSM 17093]
Length = 202
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MH TTI+ V KDGV IAGDGQV+LG T++K A KVR L G +I GFAG+ +DAFTLL
Sbjct: 1 MHGTTIVAVHKDGVTAIAGDGQVTLGDTIVKKGATKVRSLMDGRVITGFAGAVSDAFTLL 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E L Y L+R++VE K+WR D+ LRNLEAM+++AD L ++G GDV+ P+
Sbjct: 61 EKFEGYLSTYRGNLMRAAVETVKEWRTDRMLRNLEAMLIVADAEQILTLSGAGDVIAPDE 120
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
+ A+GSGG+YA +AA AL+ + SA EIA A+ IAADI +YT+ + LKV D
Sbjct: 121 PIAAVGSGGAYAQAAATALLRHSDMSAAEIAETALLIAADIDIYTSGTATV--LKVPD 176
>gi|168703140|ref|ZP_02735417.1| ATP-dependent protease peptidase subunit [Gemmata obscuriglobus UQM
2246]
Length = 178
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ ATTIL VR I GDGQV+LG VMKA+ARKVR+L G ++AGFAG++ADAF+L
Sbjct: 3 RIRATTILAVRTSNGAAIGGDGQVTLGNIVMKADARKVRKLYDGKVLAGFAGAAADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E+KL + + +++ ELAK+WR D+ LR LEAM+++ D+ L+++G GDV+ P
Sbjct: 63 LDRFEQKLRDFQGSVPKAATELAKEWRTDRILRRLEAMLVVLDRDNLLLVSGTGDVISPT 122
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V+AIGSGG YALSAARALM TQ EI R + IA D+C+YTN NI ++ L
Sbjct: 123 DNVLAIGSGGPYALSAARALMQHTQLKPAEIVRAGLEIAGDLCIYTNRNIDVQEL 177
>gi|152993267|ref|YP_001358988.1| ATP-dependent protease peptidase subunit [Sulfurovum sp. NBC37-1]
gi|166223004|sp|A6QAX2|HSLV_SULNB RecName: Full=ATP-dependent protease subunit HslV
gi|151425128|dbj|BAF72631.1| ATP-dependent protease HslVU, peptidase subunit HslV [Sulfurovum
sp. NBC37-1]
Length = 176
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 120/174 (68%), Gaps = 3/174 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + DG VI GDGQV+ G TV+K+NA K+R L +G I+AGFAGS+ADAF L
Sbjct: 2 FDATTILGYKADGKAVIGGDGQVTFGDTVLKSNATKIRTLYEGKILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L + L +S + +K WR DK+LR LEAM+++ + +++G GDV+EP++
Sbjct: 62 DMFEGILAEKRGDLFKSVIGFSKMWRKDKHLRQLEAMMIVLNTEHIFILSGTGDVVEPQD 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
G + AIGSGG+YA+SAARAL N E+ ++++ +A D+C+YTN NI +LE
Sbjct: 122 GKIAAIGSGGNYAISAARALDKHANLEPRELVQESLEVAGDLCIYTNKNIKILE 175
>gi|157737217|ref|YP_001489900.1| ATP-dependent protease peptidase subunit [Arcobacter butzleri
RM4018]
gi|315636931|ref|ZP_07892155.1| ATP-dependent protease HslV [Arcobacter butzleri JV22]
gi|166918418|sp|A8ETF7|HSLV_ARCB4 RecName: Full=ATP-dependent protease subunit HslV
gi|157699071|gb|ABV67231.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Arcobacter butzleri RM4018]
gi|315478761|gb|EFU69470.1| ATP-dependent protease HslV [Arcobacter butzleri JV22]
Length = 178
Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 116/170 (68%), Gaps = 2/170 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + VI GDGQV+ G TV+K NA K+R L K I+AGFAGS+ADAF L
Sbjct: 2 FDATTILAYKGKNKAVIGGDGQVTFGNTVLKGNATKIRTLYKDQILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E LE LL+S + +K+WR DK LR LEAM+++ +K +++G GDV+EPE+
Sbjct: 62 DMFEGHLEACKGDLLKSVIAFSKEWRKDKVLRRLEAMMIVLNKEKIFILSGNGDVVEPED 121
Query: 133 GVMA-IGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI 180
G +A IGSGG++A+SAARAL + EE+ ++++ IA ++C+YTN NI
Sbjct: 122 GAIASIGSGGNFAISAARALAKHSSLDEEELVKESLMIAGELCIYTNQNI 171
>gi|114566379|ref|YP_753533.1| ATP-dependent protease peptidase subunit [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|122318543|sp|Q0AYP2|HSLV_SYNWW RecName: Full=ATP-dependent protease subunit HslV
gi|114337314|gb|ABI68162.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
family T01B [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 178
Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
ATTI+ VRK IAGDGQV+LGQ T+MK NA K+RRL +G +IAGFAG+ ADAFTL
Sbjct: 2 FQATTIIAVRKGQQTAIAGDGQVTLGQNTIMKQNATKIRRLYEGKVIAGFAGAVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ E+KL+Q L +++VE+A++WR D+ LR LEA++++AD +++G G+++EP+
Sbjct: 62 FAKFEEKLKQAGGNLSKAAVEIAREWRSDRILRRLEALLIVADAEKIFIVSGSGELIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G+ AIGSGG+YAL+AARAL + ++ +A EIA +++ IA+ ICVYTN I +E ++
Sbjct: 122 DGIAAIGSGGAYALAAARALNAFSELNAREIAVESLKIASGICVYTNEQISVEVIE 177
>gi|332799167|ref|YP_004460666.1| ATP-dependent protease hslV [Tepidanaerobacter sp. Re1]
gi|332696902|gb|AEE91359.1| ATP-dependent protease hslV [Tepidanaerobacter sp. Re1]
Length = 177
Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 131/174 (75%), Gaps = 2/174 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
ATTIL + + IAGDGQV+ GQ T+MK +A+KVR++ G ++AGFAGS ADA TL E
Sbjct: 4 ATTILAMVNEKGAAIAGDGQVTFGQNTIMKHHAKKVRKIYNGEVLAGFAGSVADAITLFE 63
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
+ E KLE+ L +++VELAK+WR DK L+ LEA+++ ADK LVI+G G+V+EP++G
Sbjct: 64 KYEDKLEETHGNLEKAAVELAKEWRKDKMLQKLEALLITADKGHILVISGNGEVIEPDDG 123
Query: 134 VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ AIGSGGSYAL+AARAL + A++I +++ IA++ICVYTN+ I +E+L+
Sbjct: 124 IAAIGSGGSYALAAARALNRYSDLPAQKIVEESLKIASEICVYTNNYISVESLR 177
>gi|315453298|ref|YP_004073568.1| ATP-dependent protease [Helicobacter felis ATCC 49179]
gi|315132350|emb|CBY82978.1| ATP-dependent protease [Helicobacter felis ATCC 49179]
Length = 181
Score = 167 bits (423), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 122/179 (68%), Gaps = 9/179 (5%)
Query: 13 MHATTILTVR-----KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
HATTIL + KD +I GDGQVS G V+K NA K+R L G I++GFAGS+AD
Sbjct: 2 FHATTILGYKTHFEGKD-YAIIGGDGQVSFGNCVLKGNATKIRTLYHGRILSGFAGSTAD 60
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AF+L + E+ LE L +S V+ +K+WR DK+LR LEAM+++ +K +++G GDV
Sbjct: 61 AFSLFDMFERILEGKKGDLFKSVVDFSKEWRKDKFLRRLEAMMIVLNKQSIFILSGTGDV 120
Query: 128 LEPENG-VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNI-VLE 183
+EPE+G + AIGSGG+YALSAARAL + + + +++ IA +IC+YTN NI +LE
Sbjct: 121 VEPEDGKIAAIGSGGNYALSAARALDQFAKLPPKTLVEESLKIAGEICIYTNTNIKILE 179
>gi|322378786|ref|ZP_08053215.1| ATP-dependent protease peptidase subunit [Helicobacter suis HS1]
gi|321148816|gb|EFX43287.1| ATP-dependent protease peptidase subunit [Helicobacter suis HS1]
Length = 180
Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 122/179 (68%), Gaps = 9/179 (5%)
Query: 13 MHATTILTVR-----KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
HATTIL + KD +I GDGQVS ++K NA K+R L G I++GFAGS+AD
Sbjct: 2 FHATTILGYKTHFEGKD-CAIIGGDGQVSFNNCILKGNATKIRTLHHGQILSGFAGSTAD 60
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AF+L + E+ LE L +S V+ +K+WR DK+LR LEAM+++ +K +++G GDV
Sbjct: 61 AFSLFDMFERILEGKKGDLFKSVVDFSKEWRKDKFLRRLEAMMIVLNKQSIFILSGTGDV 120
Query: 128 LEPENG-VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
+EPE+G + AIGSGG+YALSAARAL S + + + +++ IA ++C+YTN NI +LE
Sbjct: 121 VEPEDGKIAAIGSGGNYALSAARALDSFAHLPPKTLVEESLKIAGNLCIYTNQNIKILE 179
>gi|224437277|ref|ZP_03658249.1| ATP-dependent protease peptidase subunit [Helicobacter cinaedi CCUG
18818]
gi|313143732|ref|ZP_07805925.1| ATP-dependent protease hslV [Helicobacter cinaedi CCUG 18818]
gi|313128763|gb|EFR46380.1| ATP-dependent protease hslV [Helicobacter cinaedi CCUG 18818]
Length = 180
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 121/178 (67%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL + + +I GDGQV+ G V+K NA K+R L G I++GFAGS+ADA
Sbjct: 2 FEATTILGYKGEFEGKKCAIIGGDGQVTFGNCVLKNNATKIRTLYNGQILSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L+RS +E +K+WR DKYLR LEAM+++ + +++G GDV+
Sbjct: 62 FSLFDMFERILEGRKGDLVRSVLEFSKEWRKDKYLRKLEAMMIVLNTEHIYILSGTGDVV 121
Query: 129 EPENG-VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNI-VLE 183
EPE+G + AIGSGG+YALSAARAL Q +E+ K++ IA ++CVYTN NI +LE
Sbjct: 122 EPEDGRIAAIGSGGNYALSAARALDRYAQIPPKELVEKSLHIAGELCVYTNTNIRILE 179
>gi|302824784|ref|XP_002994032.1| hypothetical protein SELMODRAFT_431977 [Selaginella moellendorffii]
gi|300138135|gb|EFJ04914.1| hypothetical protein SELMODRAFT_431977 [Selaginella moellendorffii]
Length = 619
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 124/181 (68%), Gaps = 23/181 (12%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H M TT+L +RK+ VVI GDGQV++G ++K N RKVRR+G+ N+I GFAG
Sbjct: 29 QHSDKGMIGTTVLCIRKNDSVVIIGDGQVTMGAEILKPNVRKVRRIGE-NVIGGFAG--- 84
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
QL R++VELAK WR DK+LR L+A++++AD I+L ITG GD
Sbjct: 85 ------------------QLTRAAVELAKAWRTDKFLRRLDALMVVADAEISLTITGTGD 126
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEP +G++ IGSGGSYA +AARALM + AE+IARKAM IAAD C+YTNHN LET+
Sbjct: 127 VLEPYDGIVGIGSGGSYASAAARALMDLPDMDAEKIARKAMKIAADCCIYTNHNFTLETI 186
Query: 186 K 186
K
Sbjct: 187 K 187
>gi|322380635|ref|ZP_08054787.1| ATP-dependent protease, peptidase subunit [Helicobacter suis HS5]
gi|321146957|gb|EFX41705.1| ATP-dependent protease, peptidase subunit [Helicobacter suis HS5]
Length = 180
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 121/179 (67%), Gaps = 9/179 (5%)
Query: 13 MHATTILTVR-----KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
HATTIL + KD +I GDGQVS ++K NA K+R L G +++GFAGS+AD
Sbjct: 2 FHATTILGYKTHFEGKD-CAIIGGDGQVSFNNCILKGNATKIRTLHHGQVLSGFAGSTAD 60
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AF+L + E+ LE L +S V+ +K+WR DK+LR LEAM+++ +K +++G GDV
Sbjct: 61 AFSLFDMFERILEGKKGDLFKSVVDFSKEWRKDKFLRRLEAMMIVLNKQSIFILSGTGDV 120
Query: 128 LEPENG-VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNI-VLE 183
+EPE+G + AIGSGG+YALSAARAL + + + +++ IA ++C+YTN NI +LE
Sbjct: 121 VEPEDGKIAAIGSGGNYALSAARALDLFAHLPPKTLVEESLKIAGNLCIYTNQNIKILE 179
>gi|91204119|emb|CAJ71772.1| strongly similar to ATP-dependent Hsl protease, peptidase subunit
[Candidatus Kuenenia stuttgartiensis]
Length = 178
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 132/170 (77%), Gaps = 1/170 (0%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
+TTIL+VRK G V I GDGQV++ TV+K +A+K+RRL ++ GFAGSSAD+F L+ER
Sbjct: 7 STTILSVRKGGHVAIGGDGQVTMQATVVKHDAKKIRRLYHDKVLVGFAGSSADSFALMER 66
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
+ KLEQY +LRS+ ELA++WR DK LR LE+++++ DK + +I+G GDV+EP++G+
Sbjct: 67 FDAKLEQYQGNVLRSAHELAREWRTDKVLRRLESLLVVVDKQHSFLISGSGDVIEPDDGI 126
Query: 135 MAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLE 183
+ IGSGGSYA++AARAL T S +EI ++++IAADICVYTN NI +E
Sbjct: 127 IGIGSGGSYAVAAARALAKHTPLSVKEIVAESLNIAADICVYTNKNIKVE 176
>gi|270290226|ref|ZP_06196451.1| ATP-dependent protease hslV [Pediococcus acidilactici 7_4]
gi|270281007|gb|EFA26840.1| ATP-dependent protease hslV [Pediococcus acidilactici 7_4]
Length = 184
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 130/179 (72%), Gaps = 3/179 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
VK ATTI+ + +G +AGDGQV++G+ +MK ARKVRR+ G +I GFAGS ADAF
Sbjct: 3 VKFDATTIIAINHNGENAMAGDGQVTMGEKFIMKGTARKVRRIYDGKVIVGFAGSVADAF 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L E+ EKKL +Y L R+SVELAK WR D+ L+ LEAM+++ D+ +++G G+V+
Sbjct: 63 NLEEKFEKKLSEYSGNLQRASVELAKIWRGDQQLQKLEAMLIVMDQKEMYLVSGSGEVIA 122
Query: 130 PENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P++G++AIGSGG++AL+AA+AL + +A+EIA+ A+++A DI ++TNHN++ K
Sbjct: 123 PDDGILAIGSGGNFALAAAKALKQHAKDMTAKEIAKTAINVAGDIDIFTNHNVIALDFK 181
>gi|304384960|ref|ZP_07367306.1| ATP-dependent protease HslVU [Pediococcus acidilactici DSM 20284]
gi|304329154|gb|EFL96374.1| ATP-dependent protease HslVU [Pediococcus acidilactici DSM 20284]
Length = 189
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 130/179 (72%), Gaps = 3/179 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
VK ATTI+ + +G +AGDGQV++G+ +MK ARKVRR+ G +I GFAGS ADAF
Sbjct: 8 VKFDATTIIAINHNGENAMAGDGQVTMGEKFIMKGTARKVRRIYDGKVIVGFAGSVADAF 67
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L E+ EKKL +Y L R+SVELAK WR D+ L+ LEAM+++ D+ +++G G+V+
Sbjct: 68 NLEEKFEKKLSEYSGNLQRASVELAKIWRGDQQLQKLEAMLIVMDQKEMYLVSGSGEVIA 127
Query: 130 PENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P++G++AIGSGG++AL+AA+AL + +A+EIA+ A+++A DI ++TNHN++ K
Sbjct: 128 PDDGILAIGSGGNFALAAAKALKQHAKDMTAKEIAKTAINVAGDIDIFTNHNVIALDFK 186
>gi|32265809|ref|NP_859841.1| ATP-dependent protease peptidase subunit [Helicobacter hepaticus
ATCC 51449]
gi|47605649|sp|Q7VJD3|HSLV_HELHP RecName: Full=ATP-dependent protease subunit HslV
gi|32261858|gb|AAP76907.1| ATP-dependent protease subunit HslV/ClpQ [Helicobacter hepaticus
ATCC 51449]
Length = 180
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 121/178 (67%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL + + +I GDGQV+ G V+K NA K+R L G I++GFAGS+ADA
Sbjct: 2 FEATTILGYKGEYNGKKCAIIGGDGQVTFGNCVLKNNATKIRTLYNGEILSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L+RS +E +K+WR DKYLR LEAM+++ + +++G GDV+
Sbjct: 62 FSLFDMFERILEGRKGDLVRSVLEFSKEWRKDKYLRKLEAMMIVLNTEHIYILSGTGDVV 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
EPE+G + AIGSGG+YALSAARAL + + EI +++IA ++C+YTN NI +LE
Sbjct: 122 EPEDGTIAAIGSGGNYALSAARALHNYASLPPREIVEHSLAIAGELCIYTNTNIKILE 179
>gi|71416273|ref|XP_810173.1| hslvu complex proteolytic subunit-like [Trypanosoma cruzi strain CL
Brener]
gi|71664447|ref|XP_819204.1| hslvu complex proteolytic subunit-like [Trypanosoma cruzi strain CL
Brener]
gi|70874668|gb|EAN88322.1| hslvu complex proteolytic subunit-like, putative [Trypanosoma
cruzi]
gi|70884495|gb|EAN97353.1| hslvu complex proteolytic subunit-like, putative [Trypanosoma
cruzi]
Length = 209
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 130/179 (72%), Gaps = 4/179 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
A + TTIL+VRK VV+ GD QV+LG+ ++ K++A K+R++ +I+ GFAGS+ADA
Sbjct: 14 ACQSRQTTILSVRKGDTVVLIGDRQVTLGERIVAKSSACKLRKIND-DIVIGFAGSTADA 72
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
L+E+LE K+ ++P QL R++VELAKDWR D+ LR LEA +++ + TL I G G+V+
Sbjct: 73 IALMEKLENKVGEFPQQLTRAAVELAKDWRTDRALRRLEASLIVCGREETLEIDGQGNVI 132
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
PE +G++AIGSGG++A +AARAL+ AE+IARKAM IA +I V++N + +E L
Sbjct: 133 TPESDGIVAIGSGGTFAKAAARALIDVDGYDAEKIARKAMRIATEIDVFSNEHWDVEIL 191
>gi|322829064|gb|EFZ32621.1| hslvu complex proteolytic subunit-like, putative [Trypanosoma
cruzi]
Length = 265
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 130/179 (72%), Gaps = 4/179 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
A + TTIL+VRK VV+ GD QV+LG+ ++ K++A K+R++ +I+ GFAGS+ADA
Sbjct: 70 ACQSRQTTILSVRKGDTVVLIGDRQVTLGERIVAKSSACKLRKIND-DIVIGFAGSTADA 128
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
L+E+LE K+ ++P QL R++VELAKDWR D+ LR LEA +++ + TL I G G+V+
Sbjct: 129 IALMEKLENKVGEFPQQLTRAAVELAKDWRTDRALRRLEASLIVCGREETLEIDGQGNVI 188
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
PE +G++AIGSGG++A +AARAL+ AE+IARKAM IA +I V++N + +E L
Sbjct: 189 TPESDGIVAIGSGGTFAKAAARALIDVDGYDAEKIARKAMRIATEIDVFSNEHWDVEIL 247
>gi|258590895|emb|CBE67190.1| ATP-dependent protease hslV (protease subunit of a proteasome-like
degradation complex) [NC10 bacterium 'Dutch sediment']
Length = 159
Score = 163 bits (413), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 119/159 (74%), Gaps = 1/159 (0%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
++AGDGQVS G+TVMK ARKVRRL +IAGFAG++ADAF L R E KLE + L
Sbjct: 1 MVAGDGQVSFGETVMKQTARKVRRLWNDRVIAGFAGAAADAFALQSRFEAKLEAFSGNLP 60
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
R++VELAKDWR D+ LR LEA+++ D+ +LVI+G GDV+EP++GV+ IGSGG YA++A
Sbjct: 61 RAAVELAKDWRTDRALRRLEALLVAVDREHSLVISGTGDVIEPDDGVVGIGSGGQYAVAA 120
Query: 148 ARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
ARAL+ ++ A IA +AM IAA ICVYTN I +E L
Sbjct: 121 ARALIGFSELDARRIAEEAMKIAASICVYTNDTITIEEL 159
>gi|302841071|ref|XP_002952081.1| hypothetical protein VOLCADRAFT_92617 [Volvox carteri f.
nagariensis]
gi|300262667|gb|EFJ46872.1| hypothetical protein VOLCADRAFT_92617 [Volvox carteri f.
nagariensis]
Length = 390
Score = 163 bits (413), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 109/162 (67%), Gaps = 27/162 (16%)
Query: 26 VVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQ 85
+VV+ GDGQVS+G +K N RKVRR+G+G ++AGFAG++AD +LLERLE KLE++P Q
Sbjct: 1 MVVMIGDGQVSVGTVTVKPNVRKVRRIGEG-VVAGFAGTAADGLSLLERLEMKLEEHPGQ 59
Query: 86 LLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYAL 145
LLR++VELAK WR DK LR L+A +L+AD + TL I+G GDVLEP +GVM
Sbjct: 60 LLRAAVELAKQWRQDKALRFLQAELLVADASTTLTISGNGDVLEPHDGVM---------- 109
Query: 146 SAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
+KAM IAAD+C+YTN N +E++ V
Sbjct: 110 ----------------GKKAMKIAADMCIYTNDNFTVESISV 135
>gi|313884886|ref|ZP_07818638.1| ATP-dependent protease HslVU, peptidase subunit [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619577|gb|EFR31014.1| ATP-dependent protease HslVU, peptidase subunit [Eremococcus
coleocola ACS-139-V-Col8]
Length = 175
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 128/174 (73%), Gaps = 4/174 (2%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI VRKD + +AGDGQV++G+TV MK ARK+RR+ ++ GFAG ADA TL E
Sbjct: 2 TTICAVRKDNQLAMAGDGQVTMGETVIMKGGARKLRRIYDDKVVVGFAGGVADAITLSEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E+KL + QL+R+++E+AK WR D+ L+ LEA++++ D L+++G G+V+EP++GV
Sbjct: 62 FEEKLRSHQGQLVRAAIEVAKQWRTDRSLQKLEALLIVMDNKDLLMVSGTGEVIEPDDGV 121
Query: 135 MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
+ IGSGG+YAL+AARA++ N AEEIAR+A+ IA+ I VYTN NI++E+
Sbjct: 122 LTIGSGGNYALAAARAMLRQGNPDLKAEEIAREALLIASQIDVYTNDNILVESF 175
>gi|262392522|ref|YP_003284376.1| ATP-dependent protease HslV [Vibrio sp. Ex25]
gi|262336116|gb|ACY49911.1| ATP-dependent protease HslV [Vibrio sp. Ex25]
Length = 156
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/145 (57%), Positives = 112/145 (77%), Gaps = 1/145 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK NARKVRRL ++AGFAG +ADAFTL ER E KL+ + L +++VELAKDWR D+
Sbjct: 1 MKGNARKVRRLYNNQVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+T +L+ITG GDV++PE+ ++AIGSGG+YA +AA AL+ +T A E
Sbjct: 61 ALRKLEALLAVADETASLIITGNGDVVQPEHDLIAIGSGGAYAQAAATALLENTDLDARE 120
Query: 161 IARKAMSIAADICVYTNHNIVLETL 185
IA KA++IA DICV+TNH+ +E L
Sbjct: 121 IAEKALNIAGDICVFTNHHHTVEEL 145
>gi|308271352|emb|CBX27960.1| ATP-dependent protease hslV [uncultured Desulfobacterium sp.]
Length = 194
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 119/174 (68%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL VR + +AGDGQV+L V+K A+KVRR+ II GFAG++ADA L
Sbjct: 21 FHGTTILAVRHKDKIAVAGDGQVTLNNMVVKHTAKKVRRIYNDTIIVGFAGATADALNLS 80
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE+Y L RS+VELAKDWR DKYLR LEA+++ D T +I+G GDV+EP+
Sbjct: 81 ERLEGKLERYNGNLTRSAVELAKDWRTDKYLRRLEALMIAVDNTRIFLISGNGDVIEPDE 140
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
G + IGSGG A +AA AL+ N SA EI ++M IA+ +CVYTN I +E L
Sbjct: 141 GFIGIGSGGIGAQAAAAALIKHSNLSAREIVEESMKIASSLCVYTNDKITIEEL 194
>gi|15645142|ref|NP_207312.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
26695]
gi|11132781|sp|O25253|HSLV_HELPY RecName: Full=ATP-dependent protease subunit HslV
gi|2313630|gb|AAD07583.1| heat shock protein (hslV) [Helicobacter pylori 26695]
Length = 180
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 119/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGELNHKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++GMGDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHIFILSGMGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG+YALSAARAL + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|261884678|ref|ZP_06008717.1| ATP-dependent protease peptidase subunit [Campylobacter fetus
subsp. venerealis str. Azul-94]
Length = 180
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 121/180 (67%), Gaps = 4/180 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HA TIL + +I GDGQVS TV+K NA K+R+L G I+AGFAGS+ADAF L
Sbjct: 2 FHARTILAYKGTKGSIIGGDGQVSFVHTVLKGNAVKIRKLLGGRILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E+ L LL + + +K+WR DK LR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMSERILVSTKGDLLPAVMAFSKEWRKDKVLRKLEAMMLVLDRVHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
G + AIGSGG+YAL+AARAL + + EE+ ++++ IA +IC+YTN NI +T + DE
Sbjct: 122 GTIAAIGSGGNYALAAARALDKFADINEEELVKESLKIAGEICIYTNTNI--KTYALWDE 179
>gi|208434437|ref|YP_002266103.1| heat shock protein [Helicobacter pylori G27]
gi|217032970|ref|ZP_03438443.1| hypothetical protein HPB128_141g3 [Helicobacter pylori B128]
gi|298736226|ref|YP_003728752.1| HslV [Helicobacter pylori B8]
gi|238065879|sp|B5Z6N8|HSLV_HELPG RecName: Full=ATP-dependent protease subunit HslV
gi|208432366|gb|ACI27237.1| heat shock protein [Helicobacter pylori G27]
gi|216945299|gb|EEC23974.1| hypothetical protein HPB128_141g3 [Helicobacter pylori B128]
gi|298355416|emb|CBI66288.1| HslV [Helicobacter pylori B8]
Length = 180
Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 119/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++GMGDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGMGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG+YALSAARAL + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|301063917|ref|ZP_07204392.1| ATP-dependent protease HslVU, peptidase subunit [delta
proteobacterium NaphS2]
gi|300441992|gb|EFK06282.1| ATP-dependent protease HslVU, peptidase subunit [delta
proteobacterium NaphS2]
Length = 187
Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 130/174 (74%), Gaps = 2/174 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ ATT+L VRK+G VI GDGQV+LG T+MK NA KVRR+ + ++AGFAG++ADAF L
Sbjct: 8 KIRATTVLAVRKNGRCVIGGDGQVTLGDTIMKHNATKVRRMYQDTVLAGFAGAAADAFNL 67
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERLE KLE Y L++++VELAKDWR DK LR LEA++L AD+ L+I+G GDV+EP+
Sbjct: 68 FERLEGKLESYGGNLVKAAVELAKDWRTDKILRKLEALLLAADEQHMLIISGTGDVIEPD 127
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNI-VLE 183
V AIGSGG YA +AA+AL + + A+ I ++ IAA IC+YTN +I VLE
Sbjct: 128 MSVAAIGSGGPYAQAAAQALTLHSDLEAKAIVEASLKIAASICLYTNEHITVLE 181
>gi|317013932|gb|ADU81368.1| ATP-dependent protease subunit HslV [Helicobacter pylori
Gambia94/24]
Length = 180
Score = 160 bits (405), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 119/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEFDNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++GMGDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHVFILSGMGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG++ALSAARAL + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|291276926|ref|YP_003516698.1| putative ATP-dependent protease [Helicobacter mustelae 12198]
gi|290964120|emb|CBG39964.1| putative ATP-dependent protease [Helicobacter mustelae 12198]
Length = 174
Score = 160 bits (405), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 112/159 (70%), Gaps = 3/159 (1%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
++ GDGQV+ G V+K+NA K+R+L I++GFAGS+ADAF L + E+ LE L+
Sbjct: 14 IVGGDGQVTFGNCVLKSNATKIRKLYNNRILSGFAGSTADAFWLFDMFEQILENKKGDLV 73
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-NGVMAIGSGGSYALS 146
R +E +K WR DKYLR LEAM+++ DK +++G GDV+EPE N + +IGSGG+YALS
Sbjct: 74 RGVLEFSKLWRKDKYLRKLEAMMIVLDKDHIFILSGTGDVVEPEDNKIASIGSGGNYALS 133
Query: 147 AARAL-MSTQNSAEEIARKAMSIAADICVYTNHNI-VLE 183
AARAL T E+ + A++IA +IC+YTN NI +LE
Sbjct: 134 AARALDRFTSLHPRELVQNALNIAGEICIYTNTNIKILE 172
>gi|291296103|ref|YP_003507501.1| 20S proteasome A and B subunits [Meiothermus ruber DSM 1279]
gi|290471062|gb|ADD28481.1| 20S proteasome A and B subunits [Meiothermus ruber DSM 1279]
Length = 183
Score = 160 bits (405), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 126/168 (75%), Gaps = 2/168 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAFT 70
+MH TTI+ VR+DGV IAGDGQV+LGQT+MK +A KVRRL +G+ I+ GFAG+ ADA T
Sbjct: 3 RMHGTTIVAVRRDGVTAIAGDGQVTLGQTIMKTSAVKVRRLEQGDGILVGFAGAVADALT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LLE+ E L L R+++E AK WR D+ LR+LEAM+++AD+ L+++G G+VL P
Sbjct: 63 LLEKFEGALSGAKGNLPRAAIETAKLWRTDRVLRSLEAMLVLADRDHLLLLSGNGEVLNP 122
Query: 131 ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTN 177
+ V+A+GSGG YAL+AA+AL+ + SA +IA +A+ IA +I +YT+
Sbjct: 123 DEPVIAVGSGGPYALAAAKALLRYSSLSAPQIAEQAIRIAGEIDLYTS 170
>gi|188527648|ref|YP_001910335.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
Shi470]
gi|238691931|sp|B2UTX3|HSLV_HELPS RecName: Full=ATP-dependent protease subunit HslV
gi|188143888|gb|ACD48305.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
Shi470]
Length = 180
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 119/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG+YALSAARAL S + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDSFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|317181835|dbj|BAJ59619.1| ATP-dependent protease peptidase subunit [Helicobacter pylori F57]
Length = 180
Score = 160 bits (404), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 120/178 (67%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++GMGDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGMGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG++ALSAARAL + + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDNFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|328950839|ref|YP_004368174.1| ATP-dependent protease HslVU, peptidase subunit [Marinithermus
hydrothermalis DSM 14884]
gi|328451163|gb|AEB12064.1| ATP-dependent protease HslVU, peptidase subunit [Marinithermus
hydrothermalis DSM 14884]
Length = 178
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 122/175 (69%), Gaps = 2/175 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++H TTI+ VRK+GV IAGDGQV+LG TVMK A KVR+L +G+++ GFAG+ ADAFTL
Sbjct: 3 RLHGTTIIAVRKEGVTAIAGDGQVTLGHTVMKHGAVKVRKL-EGDVLVGFAGAVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LE+ E++L + L R++VE K WR D+ LR+LEAM++ ADK L+++G G+V+ P+
Sbjct: 62 LEKFEEQLREAKGNLARAAVETVKLWRTDRVLRHLEAMLIAADKEQLLLLSGTGEVIAPD 121
Query: 132 NGVMAIGSG-GSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+A+GSG +A L + A EIAR+A+ IA +I +YTN N + T+
Sbjct: 122 EPVLAVGSGAAYALAAAKALLAHSALPAPEIAREALRIAGEIDLYTNGNATVLTV 176
>gi|320450078|ref|YP_004202174.1| ATP-dependent protease HslVU, peptidase subunit [Thermus
scotoductus SA-01]
gi|320150247|gb|ADW21625.1| ATP-dependent protease HslVU, peptidase subunit [Thermus
scotoductus SA-01]
Length = 180
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 129/177 (72%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAF 69
+++H TTIL VRKDGV +AGDGQV+ GQTV+K A KVRRL G I+ GFAG ADA
Sbjct: 1 MEIHGTTILAVRKDGVTALAGDGQVTFGQTVLKRGAVKVRRLEVGEGILVGFAGGVADAL 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+LLER E+KL++ LL+ +VE AK WR D+ LR+L+AMI+ AD+ ++++G G+V+
Sbjct: 61 SLLERFEEKLKEAKGNLLKGAVETAKLWRTDRVLRHLQAMIIAADREGMVLLSGSGEVIT 120
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
PE ++A+GSGG YAL+AA+AL + SA EIA +A+ IAA++ +YT+ + + TL
Sbjct: 121 PEEPLLAVGSGGPYALAAAKALYRHSSLSAREIAEEALRIAAEVDLYTSGQVTVLTL 177
>gi|109947436|ref|YP_664664.1| ATP-dependent protease peptidase subunit [Helicobacter acinonychis
str. Sheeba]
gi|123362637|sp|Q17XG1|HSLV_HELAH RecName: Full=ATP-dependent protease subunit HslV
gi|109714657|emb|CAJ99665.1| heat shock protein [Helicobacter acinonychis str. Sheeba]
Length = 180
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 119/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEFNNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG+YALSAARAL + +++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDCFAHLEPKKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|317010765|gb|ADU84512.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
SouthAfrica7]
Length = 180
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 119/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEFNNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG+YALSAARAL + +++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPKKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|237736958|ref|ZP_04567439.1| ATP-dependent protease peptidase subunit [Fusobacterium mortiferum
ATCC 9817]
gi|229420820|gb|EEO35867.1| ATP-dependent protease peptidase subunit [Fusobacterium mortiferum
ATCC 9817]
Length = 182
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 136/178 (76%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ + ATTI+ V+KDG V +AGDGQV+ G+ V K+NA+K+R++ K NI+AGFAG++ADAF
Sbjct: 5 IMIKATTIIAVKKDGKVAMAGDGQVTFGEVVFKSNAKKIRKIEKYNIMAGFAGAAADAFA 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L+++ E KLE++ L +S+VELAKDWR DK LR L+AM+++ADK LV++G GDV+EP
Sbjct: 65 LMDKFESKLEEFGGNLKKSAVELAKDWRNDKALRVLDAMLIVADKDTILVLSGNGDVIEP 124
Query: 131 ENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ + AIGSGGSYA +AARAL+ E+IA +AM+IA ++C+YTN NI + +K
Sbjct: 125 DGDIAAIGSGGSYAYAAARALLLHGKDMPVEQIAIEAMAIAGEMCIYTNSNITYDVIK 182
>gi|308184322|ref|YP_003928455.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
SJM180]
gi|308060242|gb|ADO02138.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
SJM180]
Length = 180
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEFDNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHIFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG+YALSAARAL + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|315586804|gb|ADU41185.1| ATP-dependent protease HslVU [Helicobacter pylori 35A]
gi|332673694|gb|AEE70511.1| ATP-dependent protease HslVU [Helicobacter pylori 83]
Length = 180
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 119/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG++ALSAARAL S + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|308182669|ref|YP_003926796.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
PeCan4]
gi|308064854|gb|ADO06746.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
PeCan4]
Length = 180
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 117/178 (65%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFAFIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHVFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG+YALSAARAL + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|308063689|gb|ADO05576.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
Sat464]
Length = 180
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 119/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG+YALSAARAL + + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDNFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|317177647|dbj|BAJ55436.1| ATP-dependent protease peptidase subunit [Helicobacter pylori F16]
Length = 180
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFAFIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG++ALSAARAL S + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|210134716|ref|YP_002301155.1| ATP-dependent protease peptidase subunit [Helicobacter pylori P12]
gi|238065876|sp|B6JL97|HSLV_HELP2 RecName: Full=ATP-dependent protease subunit HslV
gi|210132684|gb|ACJ07675.1| heat shock protein protease subunit [Helicobacter pylori P12]
Length = 180
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFAFIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG+YALSAARAL + +++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPKKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|254779463|ref|YP_003057568.1| ATP-dependent protease peptidase subunit [Helicobacter pylori B38]
gi|254001374|emb|CAX29359.1| ATP-dependent protease HslV [Helicobacter pylori B38]
Length = 180
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHIFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG+YALSAARAL + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|108562914|ref|YP_627230.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
HPAG1]
gi|123247001|sp|Q1CU16|HSLV_HELPH RecName: Full=ATP-dependent protease subunit HslV
gi|107836687|gb|ABF84556.1| heat shock protein [Helicobacter pylori HPAG1]
gi|317009509|gb|ADU80089.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
India7]
gi|317012331|gb|ADU82939.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
Lithuania75]
Length = 180
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG+YALSAARAL + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|68171726|ref|ZP_00545079.1| 20S proteasome, A and B subunits [Ehrlichia chaffeensis str.
Sapulpa]
gi|67998848|gb|EAM85547.1| 20S proteasome, A and B subunits [Ehrlichia chaffeensis str.
Sapulpa]
Length = 137
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 94/111 (84%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M+ TTIL +R+ V+IAGDGQVSLG TV+K +A+K++RL +I GFAG++ADAFTL
Sbjct: 9 MYGTTILCIRRGNKVIIAGDGQVSLGHTVIKNSAKKIKRLANDTVITGFAGATADAFTLF 68
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
ERLE KLE++P QLLR+ VELAKDWRMD+YLR LEAM+++ADK+++L+I+G
Sbjct: 69 ERLESKLEKHPGQLLRACVELAKDWRMDRYLRRLEAMMIVADKSVSLIISG 119
>gi|307637193|gb|ADN79643.1| ATP-dependent protease [Helicobacter pylori 908]
gi|325995782|gb|ADZ51187.1| ATP-dependent protease [Helicobacter pylori 2018]
gi|325997378|gb|ADZ49586.1| ATP-dependent protease peptidase subunit [Helicobacter pylori 2017]
Length = 180
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEFDNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHVFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG++ALSAARAL + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|255994160|ref|ZP_05427295.1| ATP-dependent protease HslVU, peptidase subunit [Eubacterium
saphenum ATCC 49989]
gi|255993828|gb|EEU03917.1| ATP-dependent protease HslVU, peptidase subunit [Eubacterium
saphenum ATCC 49989]
Length = 184
Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 127/174 (72%), Gaps = 2/174 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
++ TTI VR++G V I GDGQV++GQ ++MK NA KVR++ K +++GFAGS ADAF
Sbjct: 8 MEFRGTTICAVRRNGKVCIGGDGQVTMGQHSIMKNNAVKVRKIYKDTVLSGFAGSVADAF 67
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+L E+ E KLE+ L +++V LA+ WR DK LR L+A++L+ADK L+I+G G+V+E
Sbjct: 68 SLTEKFENKLEENSGNLKKAAVALAQLWRSDKALRTLDALMLVADKDDILLISGNGEVIE 127
Query: 130 PENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVL 182
P+ AIGSGG+YA +AA AL +T+ A++I +K++ IA +ICVYTN +I +
Sbjct: 128 PDEDYTAIGSGGNYAYAAATALYNNTELEAKDIVKKSLEIAGNICVYTNEHITV 181
>gi|55980600|ref|YP_143897.1| ATP-dependent protease peptidase subunit [Thermus thermophilus HB8]
gi|55772013|dbj|BAD70454.1| heat shock protein HslV [Thermus thermophilus HB8]
Length = 188
Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 129/178 (72%), Gaps = 2/178 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSSADA 68
V++H TTIL VRKDGV +AGDGQV+ GQTV+K A KVR+L G ++ GFAG ADA
Sbjct: 8 GVEIHGTTILAVRKDGVTALAGDGQVTFGQTVLKRGAVKVRKLEVGEGVLVGFAGGVADA 67
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
LLER E++L++ LL+ +VE AK WR D+ LR+L+AMI+ AD+ ++++G G+V+
Sbjct: 68 LALLERFEERLKEAKGNLLKGAVETAKLWRTDRVLRHLQAMIVAADRESMVLLSGSGEVI 127
Query: 129 EPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
PE ++A+GSGG YAL+AA+AL T SA+EIA +A+ IAA++ +YT+ + + TL
Sbjct: 128 TPEEPLLAVGSGGPYALAAAKALYRHTGLSAKEIATEALRIAAEVDLYTSGQVTVLTL 185
>gi|261839653|gb|ACX99418.1| ATP-dependent protease peptidase subunit [Helicobacter pylori 52]
gi|308061842|gb|ADO03730.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
Cuz20]
Length = 180
Score = 157 bits (397), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 119/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG++ALSAARAL + + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDNFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|317180291|dbj|BAJ58077.1| ATP-dependent protease peptidase subunit [Helicobacter pylori F32]
Length = 180
Score = 157 bits (397), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFECILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG++ALSAARAL S + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|46198573|ref|YP_004240.1| ATP-dependent protease peptidase subunit [Thermus thermophilus
HB27]
gi|46196195|gb|AAS80613.1| ATP-dependent protease hslV [Thermus thermophilus HB27]
Length = 188
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 129/178 (72%), Gaps = 2/178 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSSADA 68
V++H TTIL VRKDGV +AGDGQV+ GQTV+K A KVR+L G ++ GFAG ADA
Sbjct: 8 GVEIHGTTILAVRKDGVTALAGDGQVTFGQTVLKRGAVKVRKLEVGEGVLVGFAGGVADA 67
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
LLER E++L++ LL+ +VE AK WR D+ LR+L+AMI+ AD+ ++++G G+V+
Sbjct: 68 MALLERFEERLKEAKGNLLKGAVETAKLWRTDRVLRHLQAMIVAADRESMVLLSGSGEVI 127
Query: 129 EPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
PE ++A+GSGG YAL+AA+AL T SA+EIA +A+ IAA++ +YT+ + + TL
Sbjct: 128 TPEEPLLAVGSGGPYALAAAKALYRHTGLSAKEIATEALRIAAEVDLYTSGQVTVLTL 185
>gi|317179118|dbj|BAJ56906.1| ATP-dependent protease peptidase subunit [Helicobacter pylori F30]
Length = 180
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEIGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFECILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG++ALSAARAL S + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|261838241|gb|ACX98007.1| heat shock protein, protease subunit [Helicobacter pylori 51]
Length = 180
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 119/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNRVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG++ALSAARAL + + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDNFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|15611531|ref|NP_223182.1| ATP-dependent protease peptidase subunit [Helicobacter pylori J99]
gi|11133263|sp|Q9ZLW2|HSLV_HELPJ RecName: Full=ATP-dependent protease subunit HslV
gi|4155004|gb|AAD06045.1| HEAT SHOCK PROTEIN [Helicobacter pylori J99]
Length = 180
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 13 MHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEFDNKKFALIGGDGQVTLGNCVVKANAIKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHVFILSGTGDVL 121
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
E E N + AIGSGG++ALSAARAL + ++ +++ IA D+C+YTN NI +LE
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 179
>gi|313123910|ref|YP_004034169.1| ATP-dependent protease hslv [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|11133031|sp|Q48734|HSLV_LACLE RecName: Full=ATP-dependent protease subunit HslV
gi|1359911|emb|CAA59019.1| heat shock induced protein HtpI [Lactobacillus leichmannii]
gi|312280473|gb|ADQ61192.1| ATP-dependent protease hslV [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 177
Score = 157 bits (396), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 124/174 (71%), Gaps = 3/174 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +V+ +G IAGDGQV+LG++++ K A+K+RR+ ++ GFAG ADA +L E
Sbjct: 2 TTICSVKYNGQTAIAGDGQVTLGKSIIAKTTAKKIRRIYHDQVVIGFAGGVADAVSLQEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D+ L+ LEAM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQSWRKDQTLQKLEAMVIAFNDQDLLLISGNGEVLEPDESV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+AIGSGG YA +AA ++ ++ +A EIA++A++IAADI V+T+H IV + ++
Sbjct: 122 VAIGSGGYYAQAAAVGMLRHASGMTASEIAKEAVNIAADIDVFTDHEIVTDEIE 175
>gi|300812250|ref|ZP_07092688.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
gi|300496764|gb|EFK31848.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
gi|325686013|gb|EGD28072.1| heat shock protein HslV [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 177
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 123/174 (70%), Gaps = 3/174 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +V+ +G IAGDGQV+LG++++ K A+K+RR+ ++ GFAG ADA +L E
Sbjct: 2 TTICSVKYNGQTAIAGDGQVTLGKSIIAKTTAKKIRRIYHDQVVIGFAGGVADAVSLQEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ LEAM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQSWRKDPTLQKLEAMVIAFNDQDLLLISGNGEVLEPDESV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+AIGSGG YA +AA ++ ++ +A EIA++A++IAADI V+T+H IV + ++
Sbjct: 122 VAIGSGGYYAQAAAVGMLRHASGMTASEIAKEAVNIAADIDVFTDHEIVTDEIE 175
>gi|104774157|ref|YP_619137.1| ATP-dependent protease peptidase subunit [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116514250|ref|YP_813156.1| ATP-dependent protease peptidase subunit [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|103423238|emb|CAI98071.1| ATP-dependent protease HslVU (ClpYQ), peptidasesubunit
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
gi|116093565|gb|ABJ58718.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|325125939|gb|ADY85269.1| ATP-dependent protease hslV [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 177
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 123/174 (70%), Gaps = 3/174 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +V+ +G IAGDGQV+LG++++ K A+K+RR+ ++ GFAG ADA +L E
Sbjct: 2 TTICSVKYNGQTAIAGDGQVTLGKSIIAKTTAKKIRRIYHDQVVIGFAGGVADAVSLQEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ LEAM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQSWRKDPALQKLEAMVIAFNDQDLLLISGNGEVLEPDESV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+AIGSGG YA +AA ++ ++ +A EIA++A++IAADI V+T+H IV + ++
Sbjct: 122 VAIGSGGYYAQAAAVGMLRHASGMTASEIAKEAVNIAADIDVFTDHEIVTDEIE 175
>gi|207092708|ref|ZP_03240495.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
HPKX_438_AG0C1]
Length = 169
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 111/159 (69%), Gaps = 3/159 (1%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
+I GDGQV+LG V+KANA K+R L +++GFAGS+ADAF+L + E+ LE L
Sbjct: 10 LIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADAFSLFDMFERILESKKGDLF 69
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-NGVMAIGSGGSYALS 146
+S V+ +K+WR DKYLR LEAM+++ + +++G GDVLE E N + AIGSGG+YALS
Sbjct: 70 KSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVLEAEDNKIAAIGSGGNYALS 129
Query: 147 AARALMSTQN-SAEEIARKAMSIAADICVYTNHNI-VLE 183
AARAL + ++ +++ IA D+C+YTN NI +LE
Sbjct: 130 AARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILE 168
>gi|229824241|ref|ZP_04450310.1| hypothetical protein GCWU000282_01545 [Catonella morbi ATCC 51271]
gi|229786595|gb|EEP22709.1| hypothetical protein GCWU000282_01545 [Catonella morbi ATCC 51271]
Length = 174
Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 126/171 (73%), Gaps = 3/171 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V+KD + +AGDGQ+++GQ V MK +ARK+RR+ ++ GFAG ADA TL E
Sbjct: 2 TTICAVKKDNQLAMAGDGQITMGQQVIMKGSARKIRRIYHNQVLVGFAGGVADAITLSEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E KL ++ QL R++VELAK WR D+ L+ LEA++++ DK L+++G G+V+EP++G+
Sbjct: 62 FETKLSEHQGQLTRAAVELAKSWRSDRTLQKLEALLIVMDKENLLMVSGTGEVIEPDDGI 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLE 183
+ IGSGG+YAL+AARAL + + SA +IA++A+ IA++I V+TN I +E
Sbjct: 122 LTIGSGGNYALAAARALKRNAPELSAVDIAKQALQIASEIDVFTNDQIRVE 172
>gi|315158156|gb|EFU02173.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0312]
Length = 170
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 107/141 (75%), Gaps = 1/141 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ ++ GFAGS ADAFT
Sbjct: 17 QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 76
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ +K L+++G G+V+ P
Sbjct: 77 LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 136
Query: 131 ENGVMAIGSGGSYALSAARAL 151
++G++AIGSGG++ALSAARA+
Sbjct: 137 DDGILAIGSGGNFALSAARAM 157
>gi|116333447|ref|YP_794974.1| ATP-dependent protease peptidase subunit [Lactobacillus brevis ATCC
367]
gi|116098794|gb|ABJ63943.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
family T01B [Lactobacillus brevis ATCC 367]
Length = 180
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 122/178 (68%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
VK ATTI VR +G +AGDGQV++G+ V MK A K+RR+ ++ GFAGS ADAF
Sbjct: 3 VKFEATTICAVRHNGHNAMAGDGQVTMGEKVIMKGTAHKIRRIYNNQVVVGFAGSVADAF 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L E+ E +L +Y L R++VELAK WR D+ L+ LEA++++ DK L+++G G+V+
Sbjct: 63 NLEEKFEAQLNEYSGNLQRAAVELAKQWRSDQALQKLEALLIVMDKDEMLLVSGSGEVIA 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ ++AIGSGG++AL+AA AL SA+EIA A+ IA I ++TN N++ E L
Sbjct: 123 PDDDILAIGSGGNFALAAATALHHHATDMSAKEIAESAIHIAGGIDIFTNENVISEEL 180
>gi|238855699|ref|ZP_04645996.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
jensenii 269-3]
gi|260664454|ref|ZP_05865306.1| heat shock induced protein HtpI [Lactobacillus jensenii SJ-7A-US]
gi|282932213|ref|ZP_06337660.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
jensenii 208-1]
gi|313472146|ref|ZP_07812638.1| heat shock protein HslV [Lactobacillus jensenii 1153]
gi|238831684|gb|EEQ24024.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
jensenii 269-3]
gi|239529517|gb|EEQ68518.1| heat shock protein HslV [Lactobacillus jensenii 1153]
gi|260561519|gb|EEX27491.1| heat shock induced protein HtpI [Lactobacillus jensenii SJ-7A-US]
gi|281303663|gb|EFA95818.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
jensenii 208-1]
Length = 176
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 124/177 (70%), Gaps = 5/177 (2%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI++V+ +G IAGDGQV+LG+ + K +A+K+RR+ ++ GFAG ADA +L E
Sbjct: 2 TTIVSVKHNGKTAIAGDGQVTLGEKYISKKSAKKIRRIYNNQVVIGFAGGVADAVSLEEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L+AM++ ++ L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQSWRKDPTLQKLQAMLIAFNEKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
+AIGSGG +A +AA A+ + + A EIA++A+ IAADI V+T+H I+ T ++GD
Sbjct: 122 VAIGSGGYFAQAAAVAMTRHAKEMDASEIAKEAVGIAADIDVFTDHEII--TDEIGD 176
>gi|256851128|ref|ZP_05556517.1| heat shock induced protein HtpI [Lactobacillus jensenii 27-2-CHN]
gi|260660552|ref|ZP_05861467.1| heat shock induced protein HtpI [Lactobacillus jensenii 115-3-CHN]
gi|282932233|ref|ZP_06337677.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
jensenii 208-1]
gi|297205993|ref|ZP_06923388.1| ATP-dependent protease peptidase subunit [Lactobacillus jensenii
JV-V16]
gi|256616190|gb|EEU21378.1| heat shock induced protein HtpI [Lactobacillus jensenii 27-2-CHN]
gi|260548274|gb|EEX24249.1| heat shock induced protein HtpI [Lactobacillus jensenii 115-3-CHN]
gi|281303628|gb|EFA95786.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
jensenii 208-1]
gi|297149119|gb|EFH29417.1| ATP-dependent protease peptidase subunit [Lactobacillus jensenii
JV-V16]
Length = 176
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 122/177 (68%), Gaps = 5/177 (2%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI++V+ +G IAGDGQV+LG+ + K +A+K+RR+ ++ GFAG ADA +L E
Sbjct: 2 TTIVSVKHNGKTAIAGDGQVTLGEKYISKKSAKKIRRIYNNQVVIGFAGGVADAVSLEEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L+AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQSWRKDPTLQKLQAMLIAFNDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
+AIGSGG +A +AA A+ + A EIA++A+ IAADI V+T+H I+ T ++GD
Sbjct: 122 VAIGSGGYFAQAAAVAMTRHAKDMDASEIAKEAVGIAADIDVFTDHEII--TDEIGD 176
>gi|158522507|ref|YP_001530377.1| ATP-dependent protease peptidase subunit [Desulfococcus oleovorans
Hxd3]
gi|158511333|gb|ABW68300.1| 20S proteasome A and B subunits [Desulfococcus oleovorans Hxd3]
Length = 185
Score = 150 bits (380), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 124/174 (71%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M +TTIL VR GV V+AGDGQV++ TV+K A+KVRR+ I+ G AG++ADA L
Sbjct: 12 MRSTTILAVRHRGVTVVAGDGQVTMEATVIKHGAKKVRRIYNDRIVVGIAGATADAMALS 71
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE+Y L R++VELA++WR DKYL+ LEA+++ AD+ + +I+G GDV+EP+
Sbjct: 72 ERLESKLERYNGSLTRAAVELAREWRTDKYLKRLEALMIAADQEVMYLISGTGDVIEPDA 131
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
V+AIGSG A +AA AL+ + A IA+ AM+IAA ICVYTN I +E L
Sbjct: 132 PVLAIGSGSVAARAAALALVEHSDLDAAGIAKAAMAIAAAICVYTNDQITVEEL 185
>gi|315038213|ref|YP_004031781.1| ATP-dependent protease peptidase subunit [Lactobacillus amylovorus
GRL 1112]
gi|325956668|ref|YP_004292080.1| ATP-dependent protease subunit HslV [Lactobacillus acidophilus
30SC]
gi|312276346|gb|ADQ58986.1| ATP-dependent protease peptidase subunit [Lactobacillus amylovorus
GRL 1112]
gi|325333233|gb|ADZ07141.1| ATP-dependent protease subunit HslV [Lactobacillus acidophilus
30SC]
gi|327183491|gb|AEA31938.1| ATP-dependent protease subunit HslV [Lactobacillus amylovorus GRL
1118]
Length = 174
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 118/173 (68%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ ++ GFAG ADA +L E
Sbjct: 2 TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAGGVADAVSLQEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+DWR D L+ L AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQDWRKDPALQKLNAMLIAFNDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ + A+EIA +A+ IA+ I V+T+ I+ + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHAKDMKADEIAHEAVKIASGIDVFTDDQIITDEI 174
>gi|58337281|ref|YP_193866.1| ATP-dependent protease peptidase subunit [Lactobacillus acidophilus
NCFM]
gi|58254598|gb|AAV42835.1| ATP-dependent heat shock protease [Lactobacillus acidophilus NCFM]
Length = 174
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 119/173 (68%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ ++ GFAG ADA +L +
Sbjct: 2 TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L AM++ D L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFDDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ + + A+EIA +A+ IA+ I V+T+ +IV + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHAKEMKADEIAHEAVKIASGIDVFTDDHIVTDEI 174
>gi|81428596|ref|YP_395596.1| ATP-dependent protease peptidase subunit [Lactobacillus sakei
subsp. sakei 23K]
gi|78610238|emb|CAI55287.1| ATP-dependent Hsl protease, proteolytic subunit HslV [Lactobacillus
sakei subsp. sakei 23K]
Length = 181
Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 120/180 (66%), Gaps = 10/180 (5%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V+ +G IAGDGQV++G+ V K +A+K+RR+ + GFAG ADAFTL E
Sbjct: 2 TTICAVKHNGRTAIAGDGQVTMGEKFVTKDSAKKIRRIYDNKVAIGFAGGVADAFTLQEW 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE--- 131
E+KLE+Y L ++V LA+DWR D L+ LEAM++ ++T L+I+G G+V+ P+
Sbjct: 62 FEQKLEKYSGDLQHAAVALAQDWRKDPTLQKLEAMLIAINETDILLISGNGEVITPDTLA 121
Query: 132 ---NGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V+A+GSGG++A +AA AL+ + +AE+I ++IA I VYTNHN+++E+
Sbjct: 122 ESGDQVIAVGSGGNFAQAAATALILEGKPELTAEKIVETGVNIAGGIDVYTNHNVIVESF 181
>gi|161507475|ref|YP_001577429.1| ATP-dependent protease peptidase subunit [Lactobacillus helveticus
DPC 4571]
gi|160348464|gb|ABX27138.1| ATP-dependent heat shock protein [Lactobacillus helveticus DPC
4571]
gi|323466639|gb|ADX70326.1| ATP-dependent protease HslVU [Lactobacillus helveticus H10]
Length = 178
Score = 147 bits (372), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAF 69
++ + TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ +I GFAG ADA
Sbjct: 1 MRFNMTTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVIIGFAGGVADAV 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+L + LE KLE Y L R++VE+A+ WR D L+ L AM++ + L+I+G G+VLE
Sbjct: 61 SLQDMLEGKLEAYNGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFNDKDLLLISGNGEVLE 120
Query: 130 PENGVMAIGSGGSYALSAARALMSTQNS--AEEIARKAMSIAADICVYTNHNIVLETL 185
P+ V+AIGSGG++A +AA A+ N A+EIA +A+ IA+ I V+T+ +IV + +
Sbjct: 121 PDENVVAIGSGGNFAQAAAIAMTRHANDMQADEIAHEAVKIASGIDVFTDDHIVTDEI 178
>gi|295426271|ref|ZP_06818931.1| ATP-dependent protease HslVU [Lactobacillus amylolyticus DSM 11664]
gi|295064010|gb|EFG54958.1| ATP-dependent protease HslVU [Lactobacillus amylolyticus DSM 11664]
Length = 174
Score = 147 bits (372), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 118/173 (68%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +V+ +G IAGDGQV+LG+ V+ KA+A+K+RR+ ++ GFAG ADA +L E
Sbjct: 2 TTICSVKFNGKTAIAGDGQVTLGEKVIAKASAKKIRRIFHDRVVIGFAGGVADAVSLQEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L AM++ D L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMARSWRKDPTLQKLNAMLIAFDDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YA +AA A+ + + SA +IA +A+ IA+ I V+T+ I + L
Sbjct: 122 VAIGSGGNYAQAAAIAMTRHAKEMSASDIAHEAVKIASGIDVFTDDQITTDEL 174
>gi|260101612|ref|ZP_05751849.1| ATP-dependent protease HslVU [Lactobacillus helveticus DSM 20075]
gi|260084575|gb|EEW68695.1| ATP-dependent protease HslVU [Lactobacillus helveticus DSM 20075]
Length = 174
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 119/173 (68%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ +I GFAG ADA +L +
Sbjct: 2 TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVIIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L AM++ ++ L+I+G G+VLEP+ V
Sbjct: 62 LEGKLEAYNGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFNEKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ N A+EIA +A+ IA+ I V+T+ +IV + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHANDMQADEIAHEAVKIASGIDVFTDDHIVTDEI 174
>gi|293380241|ref|ZP_06626322.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
crispatus 214-1]
gi|312977300|ref|ZP_07789048.1| heat shock protein HslV [Lactobacillus crispatus CTV-05]
gi|290923208|gb|EFE00130.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
crispatus 214-1]
gi|310895731|gb|EFQ44797.1| heat shock protein HslV [Lactobacillus crispatus CTV-05]
Length = 178
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 120/178 (67%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAF 69
++ + TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ ++ GFAG ADA
Sbjct: 1 MRFNMTTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAGGVADAV 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+L + LE KLE Y L R++VE+A+ WR D L+ L AM++ D L+I+G G+VLE
Sbjct: 61 SLQDMLEGKLESYSGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFDDKDLLLISGNGEVLE 120
Query: 130 PENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P+ V+AIGSGG++A +AA A+ + A+EIA +A+ IA+ I V+T+ IV + +
Sbjct: 121 PDENVVAIGSGGNFAQAAAIAMTRHAKDMKADEIAHEAVKIASGIDVFTDDKIVTDEI 178
>gi|112148387|gb|ABI13540.1| ATP-dependent protease Hs IVU peptidase subunit-like protein
[Lactobacillus helveticus CNRZ32]
gi|328467377|gb|EGF38455.1| ATP-dependent protease subunit HslV [Lactobacillus helveticus MTCC
5463]
Length = 174
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 118/173 (68%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ +I GFAG ADA +L +
Sbjct: 2 TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVIIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLEAYNGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFNDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALMSTQNS--AEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ N A+EIA +A+ IA+ I V+T+ +IV + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHANDMQADEIAHEAVKIASGIDVFTDDHIVTDEI 174
>gi|227879132|ref|ZP_03997016.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
JV-V01]
gi|256843165|ref|ZP_05548653.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
125-2-CHN]
gi|256850236|ref|ZP_05555665.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
MV-1A-US]
gi|262046372|ref|ZP_06019334.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
MV-3A-US]
gi|295692921|ref|YP_003601531.1| ATP-dependent protease hslvu, proteolytic subunit hslv
[Lactobacillus crispatus ST1]
gi|227861289|gb|EEJ68924.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
JV-V01]
gi|256614585|gb|EEU19786.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
125-2-CHN]
gi|256712873|gb|EEU27865.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
MV-1A-US]
gi|260573243|gb|EEX29801.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
MV-3A-US]
gi|295031027|emb|CBL50506.1| ATP-dependent protease HslVU, proteolytic subunit HslV
[Lactobacillus crispatus ST1]
Length = 174
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 117/173 (67%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ ++ GFAG ADA +L +
Sbjct: 2 TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L AM++ D L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFDDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ + A+EIA +A+ IA+ I V+T+ IV + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHAKDMKADEIAHEAVKIASGIDVFTDDKIVTDEI 174
>gi|309804147|ref|ZP_07698225.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LactinV 11V1-d]
gi|308163730|gb|EFO65999.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LactinV 11V1-d]
Length = 174
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 118/173 (68%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI VR G + IAGDGQV+LG+ V+ K+ A+KVRR+ ++ GFAG ADA +L +
Sbjct: 2 TTICAVRHKGKIAIAGDGQVTLGEKVIAKSTAKKVRRIYHNQVVVGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L RS+VE+A+ WR D L L+AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLETYSGDLRRSTVEMAQGWRKDPTLAKLQAMMIAFNDKDLLLISGNGEVLEPDEDV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YA +AA A++ S+ A +IA++A+ IAA I V+T+ I+ + +
Sbjct: 122 VAIGSGGNYAQAAALAMIRHSSDMDACDIAKEAVLIAAGIDVFTDDKIISDEI 174
>gi|259500640|ref|ZP_05743542.1| ATP-dependent protease HslVU [Lactobacillus iners DSM 13335]
gi|302191329|ref|ZP_07267583.1| ATP-dependent protease peptidase subunit [Lactobacillus iners AB-1]
gi|309805691|ref|ZP_07699731.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LactinV 09V1-c]
gi|309805937|ref|ZP_07699967.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LactinV 03V1-b]
gi|309809277|ref|ZP_07703146.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners SPIN 2503V10-D]
gi|312871403|ref|ZP_07731498.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 3008A-a]
gi|312872284|ref|ZP_07732354.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 2062A-h1]
gi|312873945|ref|ZP_07733981.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 2052A-d]
gi|312875461|ref|ZP_07735464.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 2053A-b]
gi|315653525|ref|ZP_07906446.1| ATP-dependent protease HslVU [Lactobacillus iners ATCC 55195]
gi|325912008|ref|ZP_08174410.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners UPII 143-D]
gi|325912842|ref|ZP_08175220.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners UPII 60-B]
gi|329921341|ref|ZP_08277779.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners SPIN 1401G]
gi|259168024|gb|EEW52519.1| ATP-dependent protease HslVU [Lactobacillus iners DSM 13335]
gi|308164944|gb|EFO67187.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LactinV 09V1-c]
gi|308167676|gb|EFO69825.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LactinV 03V1-b]
gi|308170390|gb|EFO72414.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners SPIN 2503V10-D]
gi|311088972|gb|EFQ47413.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 2053A-b]
gi|311090494|gb|EFQ48902.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 2052A-d]
gi|311092107|gb|EFQ50481.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 2062A-h1]
gi|311093056|gb|EFQ51405.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 3008A-a]
gi|315489216|gb|EFU78857.1| ATP-dependent protease HslVU [Lactobacillus iners ATCC 55195]
gi|325476193|gb|EGC79357.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners UPII 143-D]
gi|325477835|gb|EGC80969.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners UPII 60-B]
gi|328934633|gb|EGG31137.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners SPIN 1401G]
Length = 174
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI VR G + IAGDGQV+LG+ V+ K+ A+KVRR+ ++ GFAG ADA +L +
Sbjct: 2 TTICAVRHKGKIAIAGDGQVTLGEKVIAKSTAKKVRRIYHNQVVVGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L RS+VE+A+ WR D L L+AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLETYSGDLRRSTVEMAQGWRKDPTLAKLQAMMIAFNDKDLLLISGNGEVLEPDEDV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNI 180
+AIGSGG+YA +AA A++ S+ A +IA++A+ IAA I V+T+ I
Sbjct: 122 VAIGSGGNYAQAAALAMIRHSSDMDACDIAKEAVLIAAGIDVFTDDKI 169
>gi|227893508|ref|ZP_04011313.1| ATP-dependent protease peptidase subunit [Lactobacillus ultunensis
DSM 16047]
gi|227864678|gb|EEJ72099.1| ATP-dependent protease peptidase subunit [Lactobacillus ultunensis
DSM 16047]
Length = 174
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 117/173 (67%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ +I GFAG ADA +L +
Sbjct: 2 TTICSVRYNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVIIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFNDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ + A+EIA +A+ IA+ I V+T+ I+ + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHAKDMKADEIAHEAVKIASGIDVFTDDQIITDEI 174
>gi|42519037|ref|NP_964967.1| ATP-dependent protease peptidase subunit [Lactobacillus johnsonii
NCC 533]
gi|227889899|ref|ZP_04007704.1| T01 family HslV component of HslUV peptidase [Lactobacillus
johnsonii ATCC 33200]
gi|268319570|ref|YP_003293226.1| ATP-dependent protease peptidase subunit HslV [Lactobacillus
johnsonii FI9785]
gi|41583324|gb|AAS08933.1| ATP-dependent protease HslV [Lactobacillus johnsonii NCC 533]
gi|227849343|gb|EEJ59429.1| T01 family HslV component of HslUV peptidase [Lactobacillus
johnsonii ATCC 33200]
gi|262397945|emb|CAX66959.1| ATP-dependent protease peptidase subunit HslV [Lactobacillus
johnsonii FI9785]
gi|329667429|gb|AEB93377.1| ATP-dependent protease [Lactobacillus johnsonii DPC 6026]
Length = 174
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 117/173 (67%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR + IAGDGQV+LG+ V+ KA A+K+RR+ ++ GFAG ADA +L +
Sbjct: 2 TTICSVRYNNKTAIAGDGQVTLGEKVIAKATAKKIRRIYHDQVVIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L L+AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLETYSGDLRRAAVEMAQSWRKDPTLAKLQAMVIAFNDKDLLLISGNGEVLEPDEDV 121
Query: 135 MAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ N SA EIA++A+ IA+ I V+T+ +I + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHSNGMSASEIAKEAVKIASGIDVFTDDHITTDEI 174
>gi|297520978|ref|ZP_06939364.1| ATP-dependent protease peptidase subunit [Escherichia coli OP50]
Length = 113
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 89/112 (79%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDV 113
>gi|227903867|ref|ZP_04021672.1| ATP-dependent protease peptidase subunit [Lactobacillus acidophilus
ATCC 4796]
gi|227868258|gb|EEJ75679.1| ATP-dependent protease peptidase subunit [Lactobacillus acidophilus
ATCC 4796]
Length = 174
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 118/173 (68%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ ++ GFAG ADA +L +
Sbjct: 2 TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR L+ L AM++ D L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQAWRKYPTLQKLNAMLIAFDDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ + + A+EIA +A+ IA+ I V+T+ +IV + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHAKEMKADEIAHEAVKIASGIDVFTDDHIVTDEI 174
>gi|116629574|ref|YP_814746.1| ATP-dependent protease peptidase subunit [Lactobacillus gasseri
ATCC 33323]
gi|238853067|ref|ZP_04643459.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
gasseri 202-4]
gi|282852047|ref|ZP_06261405.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
gasseri 224-1]
gi|300361601|ref|ZP_07057778.1| ATP-dependent protease HslVU [Lactobacillus gasseri JV-V03]
gi|311110783|ref|ZP_07712180.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
gasseri MV-22]
gi|116095156|gb|ABJ60308.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Lactobacillus gasseri ATCC 33323]
gi|238834315|gb|EEQ26560.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
gasseri 202-4]
gi|282556807|gb|EFB62411.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
gasseri 224-1]
gi|300354220|gb|EFJ70091.1| ATP-dependent protease HslVU [Lactobacillus gasseri JV-V03]
gi|311065937|gb|EFQ46277.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
gasseri MV-22]
Length = 174
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 118/173 (68%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR + IAGDGQV+LG+ V+ KA A+K+RR+ ++ GFAG ADA +L +
Sbjct: 2 TTICSVRYNNQTAIAGDGQVTLGEKVIAKATAKKIRRIYHDQVVIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L L+AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLETYSGDLRRAAVEMAQSWRKDPTLAKLQAMVIAFNDKDLLLISGNGEVLEPDEDV 121
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ S+ SA EIA++A+ IA+ I V+T+ +I + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHSSGMSASEIAKEAVKIASGIDVFTDDHITTDEI 174
>gi|207108495|ref|ZP_03242657.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
HPKX_438_CA4C1]
Length = 147
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 91/125 (72%), Gaps = 1/125 (0%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
+I GDGQV+LG V+KANA K+R L +++GFAGS+ADAF+L + E+ LE L
Sbjct: 8 LIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADAFSLFDMFERILESKKGDLF 67
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-NGVMAIGSGGSYALS 146
+S V+ +K+WR DKYLR LEAM+++ + +++G GDVLE E N + AIGSGG+YALS
Sbjct: 68 KSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVLEAEDNKIAAIGSGGNYALS 127
Query: 147 AARAL 151
AARAL
Sbjct: 128 AARAL 132
>gi|229092870|ref|ZP_04224004.1| ATP-dependent protease hslV [Bacillus cereus Rock3-42]
gi|228690492|gb|EEL44275.1| ATP-dependent protease hslV [Bacillus cereus Rock3-42]
Length = 115
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/114 (55%), Positives = 88/114 (77%), Gaps = 3/114 (2%)
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP++G+
Sbjct: 2 FEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPDDGI 61
Query: 135 MAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSA RAL S +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 62 LAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 115
>gi|289672015|ref|ZP_06492905.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
syringae FF5]
Length = 128
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
ADAFTL ER E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG
Sbjct: 2 PPADAFTLFERFEAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITG 61
Query: 124 MGDVLEPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
GDV+EPE+G++A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +
Sbjct: 62 NGDVVEPEDGLIAMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITI 121
Query: 183 E 183
E
Sbjct: 122 E 122
>gi|188519587|gb|ACD57532.1| ATP-dependent protease HslV [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 145
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/146 (59%), Positives = 120/146 (82%), Gaps = 3/146 (2%)
Query: 42 MKANARKVRRLGK-GNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD 100
MK NARKVRRLG+ G ++AGFAG++ADAFTL E E KL+++ QL R++VELAKDWR +
Sbjct: 1 MKGNARKVRRLGREGQVLAGFAGAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTE 59
Query: 101 KYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAE 159
+ L LEA++ +ADK +L+I+G GDV+EPE+G++AIGSGG+YALSAARAL++ T+ A+
Sbjct: 60 RRLGKLEALLAVADKETSLIISGTGDVIEPEDGIIAIGSGGAYALSAARALLAHTELDAK 119
Query: 160 EIARKAMSIAADICVYTNHNIVLETL 185
IA +A++IA DIC+YTN N+V+E L
Sbjct: 120 TIATEAINIAGDICIYTNRNVVVEEL 145
>gi|330886167|gb|EGH20068.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv. mori
str. 301020]
Length = 124
Score = 130 bits (327), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 87/118 (73%), Gaps = 1/118 (0%)
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ER E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GD
Sbjct: 1 DAFTLFERFEAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGD 60
Query: 127 VLEPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
V+EPE+G++A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E
Sbjct: 61 VVEPEDGLIAMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIE 118
>gi|217034383|ref|ZP_03439798.1| hypothetical protein HP9810_889g28 [Helicobacter pylori 98-10]
gi|216943178|gb|EEC22648.1| hypothetical protein HP9810_889g28 [Helicobacter pylori 98-10]
Length = 143
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 97/140 (69%), Gaps = 3/140 (2%)
Query: 47 RKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL 106
+K+R L +++GFAGS+ADAF+L + E+ LE L +S V+ +K+WR DKYLR L
Sbjct: 3 QKIRSLYHNQVLSGFAGSTADAFSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRL 62
Query: 107 EAMILIADKTITLVITGMGDVLEPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARK 164
EAM+++ + +++G GDVLE E N + AIGSGG++ALSAARAL S + ++ +
Sbjct: 63 EAMMIVLNLDHIFILSGTGDVLEAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEE 122
Query: 165 AMSIAADICVYTNHNI-VLE 183
++ IA D+C+YTN NI +LE
Sbjct: 123 SLKIAGDLCIYTNTNIKILE 142
>gi|255029340|ref|ZP_05301291.1| hypothetical protein LmonL_09813 [Listeria monocytogenes LO28]
Length = 450
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V+ DG +AGDGQV+LG++V MK A+KVRRL +IAGFAGS ADAF
Sbjct: 309 MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 368
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
TL E+ E KL +Y L R+SVELA+ WR D LR LEAM+++ DK L
Sbjct: 369 TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLF 419
>gi|297379707|gb|ADI34594.1| ATP-dependent protease hslV [Helicobacter pylori v225d]
Length = 136
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 92/130 (70%), Gaps = 3/130 (2%)
Query: 57 IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT 116
+++GFAGS+ADAF+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ +
Sbjct: 6 VLSGFAGSTADAFSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLD 65
Query: 117 ITLVITGMGDVLEPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICV 174
+++G GDVLE E N + AIGSGG++ALSAARAL S + ++ +++ IA D+C+
Sbjct: 66 HIFILSGTGDVLEAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEESLKIAGDLCI 125
Query: 175 YTNHNI-VLE 183
YTN NI +LE
Sbjct: 126 YTNTNIKILE 135
>gi|75763960|ref|ZP_00743587.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74488553|gb|EAO52142.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 132
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 78/116 (67%), Gaps = 5/116 (4%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRRLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI----TLVITG 123
E E KLE+Y L R++VE+AK WR DK LR LEAM + + I +LV+ G
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMAPLFNGLIPTYGSLVVQG 119
>gi|25956178|emb|CAC82730.1| HslVU complex proteolytic subunit [Trypanosoma cruzi]
Length = 117
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 78/105 (74%), Gaps = 2/105 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
A + TTIL+VRK VV+ GD QV+LG+ ++ K++A K+R++ +I+ GFAGS+ADA
Sbjct: 14 ACQSRQTTILSVRKGDTVVLIGDRQVTLGERIVAKSSACKLRKIN-DDIVIGFAGSTADA 72
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA 113
L+E+LE K+ ++P QL R++VELAKDWR D+ LR LEA +++
Sbjct: 73 IALMEKLENKVGEFPQQLTRAAVELAKDWRTDRALRRLEASLIVC 117
>gi|167041854|gb|ABZ06595.1| hypothetical protein ALOHA_HF4000097M14ctg1g39 [uncultured marine
microorganism HF4000_097M14]
Length = 80
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 58/69 (84%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ +RKD VV+AGDGQVSLG TV+K+ A KVR++ K N+IAGFAGS+ADAFTL E
Sbjct: 8 HGTTIVLIRKDKDVVVAGDGQVSLGNTVIKSTANKVRKIEKRNVIAGFAGSTADAFTLFE 67
Query: 74 RLEKKLEQY 82
RLE KLE++
Sbjct: 68 RLEAKLEKH 76
>gi|307248793|ref|ZP_07530806.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306854720|gb|EFM86910.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 97
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 77/97 (79%), Gaps = 2/97 (2%)
Query: 91 VELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARA 150
+ELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+AIGSGG+YA +AA A
Sbjct: 1 MELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEQDVLAIGSGGNYAKAAALA 60
Query: 151 LMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
L+ TQN SA+EI +A+ IA DI +Y+NHN V+E +
Sbjct: 61 LLRTQNNLSAKEIVAEALKIAGDIDIYSNHNHVIEEV 97
>gi|309807627|ref|ZP_07701571.1| putative ATP-dependent protease HslVU, peptidase subunit
[Lactobacillus iners LactinV 01V1-a]
gi|308169124|gb|EFO71198.1| putative ATP-dependent protease HslVU, peptidase subunit
[Lactobacillus iners LactinV 01V1-a]
Length = 114
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 74/108 (68%), Gaps = 2/108 (1%)
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L RS+VE+A+ WR D L L+AM++ + L+I+G G+VLEP+ V
Sbjct: 2 LEGKLETYSGDLRRSTVEMAQGWRKDPTLAKLQAMMIAFNDKDLLLISGNGEVLEPDEDV 61
Query: 135 MAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNI 180
+AIGSGG+YA +AA A++ S+ A +IA++A+ IAA I V+T+ I
Sbjct: 62 VAIGSGGNYAQAAALAMIRHSSDMDACDIAKEAVLIAAGIDVFTDDKI 109
>gi|270603325|ref|ZP_06221603.1| ATP-dependent protease HslV [Haemophilus influenzae HK1212]
gi|270318187|gb|EFA29402.1| ATP-dependent protease HslV [Haemophilus influenzae HK1212]
Length = 58
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 47/57 (82%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI++VR+ G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL
Sbjct: 2 TTIVSVRRKGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLF 58
>gi|218659908|ref|ZP_03515838.1| ATP-dependent protease peptidase subunit [Rhizobium etli IE4771]
Length = 54
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 46/52 (88%)
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG++A +AARALM T SAEEIAR+A+ IAADICVYTNHN+V+E+L V
Sbjct: 1 AIGSGGNFAFAAARALMDTDKSAEEIARRALEIAADICVYTNHNLVVESLDV 52
>gi|330893830|gb|EGH26491.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
mori str. 301020]
Length = 54
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 46/54 (85%)
Query: 21 VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
+R+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 1 MRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFER 54
>gi|297522054|ref|ZP_06940440.1| ATP-dependent protease peptidase subunit [Escherichia coli OP50]
Length = 69
Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNI 180
TG GDV++PEN ++AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH
Sbjct: 1 TGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFH 60
Query: 181 VLETL 185
+E L
Sbjct: 61 TIEEL 65
>gi|307248794|ref|ZP_07530807.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306854721|gb|EFM86911.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 71
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 45/64 (70%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG V K RKVRR+ K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNCVEKGTVRKVRRMYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKL 79
EKKL
Sbjct: 62 EKKL 65
>gi|330893400|gb|EGH26061.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
mori str. 301020]
Length = 51
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 43/50 (86%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGAT 51
>gi|289672016|ref|ZP_06492906.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae
pv. syringae FF5]
Length = 50
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG+
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGA 50
>gi|153880554|ref|ZP_02005004.1| ATP-dependent protease hslV [Beggiatoa sp. PS]
gi|152062982|gb|EDN64996.1| ATP-dependent protease hslV [Beggiatoa sp. PS]
Length = 40
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 153 STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+T SA+EI KA+ IAADIC+YTNHN+ +E+L
Sbjct: 3 NTTLSAQEIVEKALHIAADICIYTNHNLTIESL 35
>gi|223937009|ref|ZP_03628917.1| 20S proteasome, A and B subunits [bacterium Ellin514]
gi|223894290|gb|EEF60743.1| 20S proteasome, A and B subunits [bacterium Ellin514]
Length = 203
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKA--NARKVRRLGKGNIIAGFAGSSA--DAF-T 70
+TI+ V+K+G V IA D Q + G T + A +K + L + GF G A D F +
Sbjct: 2 STIVVVKKNGEVAIAADTQTTSGGTKLSAGFKTQKEKILRFEDTYIGFVGYCAHRDVFES 61
Query: 71 LLERLEKKLE-QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT---GMGD 126
L+E+ L+ + + + ++L + D ++ + E +T+VI G+ D
Sbjct: 62 LMEKRPSDLDFKSRRHIFETFLKLHPVLKEDFFVNSKEEDSAYETSQMTIVIANPHGIFD 121
Query: 127 VLEPEN-----GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTN--HN 179
V N AIGSG YAL A T+ +A E+A + A + ++ +
Sbjct: 122 VNSDRNVTEIEAFWAIGSGREYALGAMHQAYDTRATAREVAIGGVLAACEFDPWSGLPYT 181
Query: 180 IVLETLKVG 188
+ +LK+G
Sbjct: 182 VYTASLKLG 190
>gi|229092871|ref|ZP_04224005.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
[Bacillus cereus Rock3-42]
gi|228690493|gb|EEL44276.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
[Bacillus cereus Rock3-42]
Length = 49
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKG 55
HATTI V +G +AGDGQV++G VMK ARKVR+L +G
Sbjct: 5 HATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQG 47
>gi|291612858|ref|YP_003523015.1| 20S proteasome A and B subunits [Sideroxydans lithotrophicus ES-1]
gi|291582970|gb|ADE10628.1| 20S proteasome A and B subunits [Sideroxydans lithotrophicus ES-1]
Length = 188
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 28/169 (16%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ VRK+G+ IA D + G T + A+ K+ R+G + G GS+A L
Sbjct: 2 TTIVAVRKNGIAAIAADTLTTFGNTRLHATQDASHDKILRIGDSYV--GVCGSAAHHLVL 59
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI-----------------LIAD 114
L K P+ L S + + +R + E + LIA+
Sbjct: 60 SSLLAKT----PDVQLNSKAAIFETFRKLHPILKEECFLNPKEDEEDPYESSQITALIAN 115
Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
I M +V E AIGSG ++L A + + A EIAR
Sbjct: 116 SHGIFAIYSMREVFE-YTQYWAIGSGHEFSLGAMYQAYARSDDATEIAR 163
>gi|21263928|sp|Q9PT26|PSB9_ONCMY RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; Flags: Precursor
gi|5823094|gb|AAD53038.1|AF115541_1 low molecular mass protein 2 [Oncorhynchus mykiss]
Length = 217
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 21/142 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLL-HDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + + +RS+ L K+ KY +L A +++A DK G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKNISY-KYKEDLSAHLIVAGWDK------RGGGQV 129
Query: 128 LEPENGVMAI------GSGGSY 143
NG+++ GSG SY
Sbjct: 130 YVTLNGLLSRQPFAVGGSGSSY 151
>gi|306494799|gb|ADM95871.1| PSMB9 [Oncorhynchus mykiss]
Length = 217
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 21/142 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLL-HDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + + +RS+ L K+ KY L A +++A DK G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKNISY-KYKEELSAHLIVAGWDK------RGGGQV 129
Query: 128 LEPENGVMAI------GSGGSY 143
NG+++ GSG SY
Sbjct: 130 YVTLNGLLSRQPFAVGGSGSSY 151
>gi|59275971|dbj|BAD89557.1| proteasome subunit [Oncorhynchus mykiss]
Length = 217
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 21/142 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLL-HDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + + +RS+ L K+ KY L A +++A DK G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKNISY-KYKEELSAHLIVAGWDK------RGGGQV 129
Query: 128 LEPENGVMAI------GSGGSY 143
NG+++ GSG SY
Sbjct: 130 YVTLNGLLSRQPFAVGGSGSSY 151
>gi|59275960|dbj|BAD89547.1| proteasome subunit [Oncorhynchus mykiss]
gi|225704848|gb|ACO08270.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
Length = 217
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 21/142 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLL-HDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + + +RS+ L K+ KY L A +++A DK G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKNISY-KYKEELSAHLIVAGWDK------RGGGQV 129
Query: 128 LEPENGVMAI------GSGGSY 143
NG+++ GSG SY
Sbjct: 130 YVTLNGLLSRQPFAVGGSGSSY 151
>gi|18859275|ref|NP_571466.1| proteasome subunit beta type-9 [Danio rerio]
gi|5833461|gb|AAD53519.1|AF155579_1 proteasome subunit beta 9A [Danio rerio]
gi|29561856|emb|CAD87789.1| proteasome (prosome, macropain) subunit, beta type, 9a [Danio
rerio]
gi|50416819|gb|AAH78384.1| Proteasome (prosome, macropain) subunit, beta type, 9a [Danio
rerio]
gi|94732367|emb|CAK04958.1| proteasome (prosome, macropain) subunit, beta type, 9a [Danio
rerio]
Length = 218
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 24/171 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D +VS G++V+ K+ L I +GS+ADA T+ E
Sbjct: 19 GTTIIAVTFDGGVVIGSDSRVSAGESVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEI 77
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + + L+ S+ L K+ KY L A +++A DK G G V
Sbjct: 78 VNYQLDVHSIEVEDDPLVCSAATLVKNISY-KYKEELSAHLIVAGWDK------KGGGQV 130
Query: 128 LEPENGVM-----AIGSGGSYALS----AARALMSTQNSAEEIARKAMSIA 169
+G++ AIG GS+ ++ A T+ +E A+++A
Sbjct: 131 YATLSGLLTKQPFAIGGSGSFYINGFVDAEYKKNMTKRECQEFVVNALTLA 181
>gi|225704686|gb|ACO08189.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
Length = 217
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 21/142 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLL-HDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + + +RS+ L K+ KY L A +++A DK G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKNISY-KYKEELSAHLIVAGWDK------RGGGQV 129
Query: 128 LEPENGVMAI------GSGGSY 143
NG+++ GSG SY
Sbjct: 130 YVTLNGLLSRQPFAVGGSGSSY 151
>gi|225705198|gb|ACO08445.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
Length = 217
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 21/142 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIELDGGVVLGSDSRVSAGETVVNRVMNKLSLL-HDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + + +RS+ L K+ KY L A +++A DK G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKNISY-KYKEELSAHLIVAGWDK------RGGGQV 129
Query: 128 LEPENGVMAI------GSGGSY 143
NG+++ GSG SY
Sbjct: 130 YVTLNGLLSRQPFAVGGSGSSY 151
>gi|226941102|ref|YP_002796176.1| ATP-dependent protease peptidase subunit [Laribacter hongkongensis
HLHK9]
gi|226716029|gb|ACO75167.1| ATP-dependent protease peptidase subunit [Laribacter hongkongensis
HLHK9]
Length = 190
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 78/190 (41%), Gaps = 16/190 (8%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKA--NARKVRRLGKGNIIAGFAGSSADAFTL-- 71
TTI V+K V IA D Q + G T + A +AR + +GS+A L
Sbjct: 2 TTITVVKKGREVAIAADCQSTFGDTRLTATHDARSNKIFELDGSFFAISGSAAHDLVLQA 61
Query: 72 -LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA----------MILIADKTITLV 120
L RL+ + + + +L + D +L+ E +LIA+
Sbjct: 62 ALSRLKSRQFDSRPAIFETFRKLHPKLKDDFFLKTEEEEDDPYESSQMTVLIANPHGIFA 121
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
+ M +V E N AIGSG YA+ A A A EIA+ + + V T+ +
Sbjct: 122 VYSMREVYE-FNQFWAIGSGRDYAVGAMWAAWPHLEGAAEIAQLGVQAGCEFDVGTSLPM 180
Query: 181 VLETLKVGDE 190
L T ++ E
Sbjct: 181 TLFTTRLAAE 190
>gi|209737824|gb|ACI69781.1| Proteasome subunit beta type-9 precursor [Salmo salar]
gi|209738640|gb|ACI70189.1| Proteasome subunit beta type-9 precursor [Salmo salar]
Length = 217
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLL-HDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + ++ +RS+ L K+ KY L A +++A DK G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKNISY-KYKEELSAHLIVAGWDK------RGGGQV 129
Query: 128 LEPENGVM-----AIGSGGS 142
NG++ A+G GS
Sbjct: 130 YVTLNGLLSRQSFAVGGSGS 149
>gi|225709296|gb|ACO10494.1| Proteasome subunit beta type-9 precursor [Caligus rogercresseyi]
Length = 217
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLL-HDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + ++ +RS+ L K+ KY L A +++A DK G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKNISY-KYKEELSAHLIVAGWDK------RGGGQV 129
Query: 128 LEPENGVM-----AIGSGGS 142
NG++ A+G GS
Sbjct: 130 YVTLNGLLSRQPFAVGGSGS 149
>gi|185133857|ref|NP_001117174.1| proteasome subunit beta type-9 precursor [Salmo salar]
gi|185136351|ref|NP_001117186.1| proteasome subunit beta type-9 precursor [Salmo salar]
gi|21263915|sp|Q9DD33|PSB9_SALSA RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; Flags: Precursor
gi|12003001|gb|AAG43434.1|AF184932_1 low molecular mass protein 2 [Salmo salar]
gi|12003003|gb|AAG43435.1|AF184933_1 low molecular mass protein 2 [Salmo salar]
gi|12003005|gb|AAG43436.1|AF184934_1 low molecular mass protein 2 [Salmo salar]
gi|12003007|gb|AAG43437.1|AF184935_1 low molecular mass protein 2 [Salmo salar]
gi|12003009|gb|AAG43438.1|AF184936_1 low molecular mass protein 2 [Salmo salar]
gi|146147388|gb|ABQ01991.1| proteosome subunit beta type 9 [Salmo salar]
gi|148362122|gb|ABQ59649.1| PSMB9 [Salmo salar]
gi|148362160|gb|ABQ59682.1| PSMB9 [Salmo salar]
gi|209733640|gb|ACI67689.1| Proteasome subunit beta type-9 precursor [Salmo salar]
gi|209734580|gb|ACI68159.1| Proteasome subunit beta type-9 precursor [Salmo salar]
gi|262189357|gb|ACY30375.1| PSMB9 [Salmo salar]
Length = 217
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLL-HDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + + +RS+ L K+ KY L A +++A DK G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKNISY-KYKEELSAHLIVAGWDK------RGGGQV 129
Query: 128 LEPENGVM-----AIGSGGS 142
NG++ A+G GS
Sbjct: 130 YVTLNGLLSRQPFAVGGSGS 149
>gi|182892146|gb|AAI65916.1| Psmb9a protein [Danio rerio]
Length = 218
Score = 43.1 bits (100), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 24/171 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D +VS G++V+ K+ L I GS+ADA T+ E
Sbjct: 19 GTTIIAVTFDGGVVIGSDSRVSAGESVVNRVMNKLSPL-HDKIYCALTGSAADAQTIAEI 77
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + + L+ S+ L K+ KY L A +++A DK G G V
Sbjct: 78 VNYQLDVHSIEVEDDPLVCSAATLVKNISY-KYKEELSAHLIVAGWDK------KGGGQV 130
Query: 128 LEPENGVM-----AIGSGGSYALS----AARALMSTQNSAEEIARKAMSIA 169
+G++ AIG GS+ ++ A T+ +E A+++A
Sbjct: 131 YATLSGLLTKQPFAIGGSGSFYINGFVDAEYKKNMTKRECQEFIVNALTLA 181
>gi|328766922|gb|EGF76974.1| hypothetical protein BATDEDRAFT_92136 [Batrachochytrium
dendrobatidis JAM81]
Length = 231
Score = 43.1 bits (100), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T L + D VIAGD + S G ++ A KV + G ++A G AD+ TL++R++
Sbjct: 29 TTLAIAGDDFCVIAGDTRQSEGYSINTRYAPKVHEMRNGTVLAT-GGMFADSQTLMKRIQ 87
Query: 77 KKLEQYPNQ 85
++LE Y Q
Sbjct: 88 QRLEWYQFQ 96
>gi|185133551|ref|NP_001117730.1| proteasome subunit beta type-9 precursor [Oncorhynchus mykiss]
gi|4741816|gb|AAD28715.1|AF112117_1 low molecular mass polypeptide complex subunit 2 [Oncorhynchus
mykiss]
Length = 217
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 21/142 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+AD+ T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLL-HDKIYCALSGSAADSQTIAEM 76
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + + +RS+ L K+ KY L A +++A DK G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKNISY-KYKEELSAHLIVAGWDK------RGGGQV 129
Query: 128 LEPENGVMAI------GSGGSY 143
NG+++ GSG SY
Sbjct: 130 YVTLNGLLSRQPFAVGGSGSSY 151
>gi|296269805|ref|YP_003652437.1| proteasome endopeptidase complex [Thermobispora bispora DSM 43833]
gi|296092592|gb|ADG88544.1| Proteasome endopeptidase complex [Thermobispora bispora DSM 43833]
Length = 278
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 14/167 (8%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ V DG VV+AGD + + G + + + KV R + + G AG+++ +
Sbjct: 49 HATTIVAVICDGGVVMAGDRRATSGNYISQRDIEKVFRADDYSCL-GIAGTASIGLEVAR 107
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-----LEAMILIADKTITLVITGMGDVL 128
+LE Y RS K R+ +R ++ +++I TG G +
Sbjct: 108 LFRVELEHYEKTEGRSLSTEGKAHRLATMIRGNLGMAMQGLVVIPLFAAYDPATGKGRIF 167
Query: 129 EPENG--------VMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
+ G AIGSG +A + + L S EE R ++
Sbjct: 168 SYDVGGGPYEQYDYHAIGSGSIFARGSLKKLYRPGCSVEEAIRVCLN 214
>gi|225716290|gb|ACO13991.1| Proteasome subunit beta type-9 precursor [Esox lucius]
Length = 216
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 21/142 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 17 GTTIIAVEFNGGVVLGSDSRVSAGETVVNRVMNKLSLL-HDKIYCALSGSAADAQTIAEM 75
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + ++ +RS+ L K+ KY L A +++A D+ G G V
Sbjct: 76 VNYQLDVHSIEIGEDPQVRSAATLVKNISY-KYKEELSAHLIVAGWDR------RGGGQV 128
Query: 128 LEPENGVMAI------GSGGSY 143
NG+++ GSG SY
Sbjct: 129 FVTLNGLLSRQPFAVGGSGSSY 150
>gi|289643904|ref|ZP_06476008.1| 20S proteasome A and B subunits [Frankia symbiont of Datisca
glomerata]
gi|289506290|gb|EFD27285.1| 20S proteasome A and B subunits [Frankia symbiont of Datisca
glomerata]
Length = 274
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 19/175 (10%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + ++G + + + KV + + + G+AG++ L+
Sbjct: 51 HGTTIVAVTYPGGVMMAGDRRATMGNVIAQRDVEKVFHADEYSCV-GYAGTAGIGADLVR 109
Query: 74 RLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLRNLEAMILIADKTITLVI-----TGMGDV 127
+ +LE Y ++ S++ L AK R+ ++N + L I L G G +
Sbjct: 110 LFQVELEHY-EKIEGSTLSLHAKANRLSFMIKNNLGLALQGLAVIPLYAGYDLDAGKGRI 168
Query: 128 LE--------PENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAAD 171
E+G AIGSG +A A + + TQ+ +A +A+ AAD
Sbjct: 169 FSYDITGSRAEEHGFQAIGSGSVFARGALKKKVRDDLTQDETVRVAVEALYDAAD 223
>gi|156617988|gb|ABU87864.1| proteasome subunit beta type 9 protein [Clupea pallasii]
Length = 217
Score = 41.6 bits (96), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G +V+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIGIEYDGGVVLGSDSRVSAGASVVNRVMNKLSLL-HDKIYCALSGSAADAQTIAEI 76
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA 113
+ +L+ + + L+RS+ L K+ KY L A +++A
Sbjct: 77 VNYQLDVHSVELGEDSLVRSAATLVKNISY-KYKEELSAHLIVA 119
>gi|225705212|gb|ACO08452.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
Length = 156
Score = 41.2 bits (95), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E +
Sbjct: 19 TTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLL-HDKIYCALSGSAADAQTIAEMV 77
Query: 76 EKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA 113
+L+ + ++ +RS+ L K+ KY L A +++A
Sbjct: 78 NYQLDVHSIEVGEDPQVRSAATLVKNISY-KYKEELSAHLIVA 119
>gi|299470598|emb|CBN80220.1| proteasome subunit beta type 6 [Ectocarpus siliculosus]
Length = 241
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ ATT++ R DG VVI D + S G V + K+ + G +A +GSSAD +
Sbjct: 20 VDATTLVAARFDGGVVIGADSRTSQGSFVANSGTDKITPVSPGVFLA-RSGSSADTQFVA 78
Query: 73 ERLEKKLEQYPNQLLR 88
+E KLE Y + R
Sbjct: 79 GVIEAKLEAYRTEFGR 94
>gi|18859277|ref|NP_571753.1| proteasome beta 9b subunit [Danio rerio]
gi|5833463|gb|AAD53520.1|AF155580_1 proteasome subunit beta 9B [Danio rerio]
Length = 227
Score = 40.8 bits (94), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G +V+ K+ L I +GS+ADA T+ E
Sbjct: 17 GTTIIAVEFDGGVVVGSDSRVSAGASVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEI 75
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA 113
+ +L+ + + L+ S+ L K+ KY L A +++A
Sbjct: 76 VNYQLDVHSIEVDEDPLVCSAATLVKNISY-KYKEELSAHLIVA 118
>gi|126465830|ref|YP_001040939.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
gi|302595722|sp|A3DN21|PSB1_STAMF RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126014653|gb|ABN70031.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 213
Score = 40.8 bits (94), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+A+ T+L ++ VVIAG+ +++ V+ N RKV + K ++ GFAG DA
Sbjct: 11 FAMSSLPGTVLGIKAVNGVVIAGEKRLTYDGYVLSKNTRKVHPITK-HVGIGFAGLVGDA 69
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK---TITLVITGMG 125
++ L + E Y ++L ++ R+ + L + ++IL + K +T V+ G
Sbjct: 70 QFIIRALRMEAENY-------ELQLGREIRV-RGLAKILSLILYSYKLAPLMTEVVVGGF 121
Query: 126 D-------VLEP-----ENGVMAIGSGGSYAL 145
D VL+P E+ +A+GSGG AL
Sbjct: 122 DEKGPQIYVLDPVGSLIEDKYVALGSGGPIAL 153
>gi|224473797|gb|ACN49141.1| proteasome beta 9 subunit [Oryzias dancena]
gi|224473814|gb|ACN49155.1| proteasome beta 9 subunit [Oryzias dancena]
Length = 216
Score = 40.8 bits (94), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ + DG VV+ D +VS G +V+ K+ L I +GS+ADA T+ E +
Sbjct: 18 TTIIAIEFDGGVVLGSDSRVSAGASVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEMV 76
Query: 76 EKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA 113
+L+ + ++ +RS+ L K+ KY L A +++A
Sbjct: 77 NYQLDVHSIEIDEDPQVRSAATLVKNISY-KYKEELSAHLIVA 118
>gi|18124172|gb|AAL59853.1|AF357921_1 proteasome beta-subunit [Heterodontus francisci]
Length = 217
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V DG VVI D +VS G+ V K+ L + I +GS+ADA + + +
Sbjct: 19 TTIIAVEFDGGVVIGSDSRVSAGEAVCNRVMNKLSVLHE-RIYCALSGSAADAQAIADSV 77
Query: 76 EKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA 113
+LE + + L+R++ + K+ KY L A +++A
Sbjct: 78 NYQLELHSIEVDDAPLVRAAASMVKNISY-KYKEELSAHLIVA 119
>gi|319794383|ref|YP_004156023.1| 20S proteasome a and b subunits [Variovorax paradoxus EPS]
gi|315596846|gb|ADU37912.1| 20S proteasome A and B subunits [Variovorax paradoxus EPS]
Length = 197
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 22/178 (12%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL-----GKGNIIAGFAGSSADAFT 70
TT++ VRK G V +A D V+ G T + A K +++ G + AG++A
Sbjct: 2 TTVVAVRKGGQVTMAADSLVTFGDTRLSHRAEKNQKIFTVEDAAGTSLFAMAGAAAHFLV 61
Query: 71 LLERL-----EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE----------AMILIADK 115
L L EK L +++ R+ L + +++ E +L+A++
Sbjct: 62 LQHALAAQEREKLLFGSKHEIFRTFTMLHPVLKDSFFMQTKEDDHEPYESSQFTMLMANQ 121
Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADI 172
+ I +V E + AIGSG S+AL A A ++ SA ++A ++ A +
Sbjct: 122 SGIYGIYSYREVFEFKE-FWAIGSGRSFALGAMHAAYDIKSRSARDVAEAGIAAACEF 178
>gi|317124897|ref|YP_004099009.1| proteasome endopeptidase complex, beta component [Intrasporangium
calvum DSM 43043]
gi|315588985|gb|ADU48282.1| proteasome endopeptidase complex, beta component [Intrasporangium
calvum DSM 43043]
Length = 277
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+++ DG VV+AGD + ++G + + KV + G + G AG++ A L+
Sbjct: 52 HGTTIVSLLHDGGVVMAGDRRATMGNIIANRDMEKV-FIADGYSVVGIAGTAGIAVELIR 110
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 111 LYQVELEHY 119
>gi|195149838|ref|XP_002015862.1| GL11283 [Drosophila persimilis]
gi|194109709|gb|EDW31752.1| GL11283 [Drosophila persimilis]
Length = 305
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 44/182 (24%)
Query: 8 HYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
H VKM H TT L R G VV+ D + + GQ + +K+ L ++ AG
Sbjct: 61 HCGVKMDFAHGTTTLGFRYQGGVVLCADSRATSGQYIGSQTMKKIVELND-YMLGTLAGG 119
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIADKTITLVIT 122
+AD +R+ LA+D R+ ++ R L M L+ + +++
Sbjct: 120 AADC-VYWDRV-----------------LARDSRLHELRFKRRLSGMGLV----MGMMLA 157
Query: 123 GMGDV-----------LEPENGVMAIGSGGSYAL----SAARALMSTQNSAEEIARKAMS 167
G D + V A+GSG YAL + R M+ Q A ++AR+A+
Sbjct: 158 GYDDEGPKLIYVDSEGMRCHGNVFAVGSGSPYALGVLDTGHRFTMTDQ-EAFDLARRAIY 216
Query: 168 IA 169
A
Sbjct: 217 HA 218
>gi|251772159|gb|EES52729.1| putative 20S proteasome beta-subunit [Leptospirillum
ferrodiazotrophum]
Length = 265
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATT+L +R +G VV+AGD Q S G V KV + + + +A AG++ A +
Sbjct: 44 HATTVLALRYEGGVVMAGDRQASEGYQVASRAISKVLPVDRSSCVA-IAGAAGPALEMAR 102
Query: 74 RLEKKLEQY 82
++E Y
Sbjct: 103 LFRVEIEHY 111
>gi|281205008|gb|EFA79202.1| anaphase promoting complex subunit 1 [Polysphondylium pallidum PN500]
Length = 1500
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 56 NIIAGFAGSSADAF--TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR-NLEAMILI 112
NI+AG S F +L L + N+LL+ V LAK R+D+ LR +E + +
Sbjct: 1101 NIVAGLCMSLGLRFAGSLNSNTADILMVWTNKLLKYQVHLAKQKRVDRSLRTTVETCLGV 1160
Query: 113 ADKTITLVITGMGDV 127
A +++LV+ G GDV
Sbjct: 1161 ASISVSLVMAGTGDV 1175
>gi|283468185|emb|CAN84588.1| low molecular mass polyprotein 2 [Melanogrammus aeglefinus]
Length = 90
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V DG VV+ D +VS G +V+ K+ L + I +GS+ADA T+ E +
Sbjct: 1 TTIMAVEFDGGVVLGSDSRVSAGASVVNRVMNKLSPLHE-RIYCALSGSAADAQTIAETV 59
Query: 76 EKKLEQYPNQLLRSSVELAKD 96
+L+ + S+EL +D
Sbjct: 60 NYQLDVH-------SMELGED 73
>gi|297527496|ref|YP_003669520.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
gi|297256412|gb|ADI32621.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
Length = 215
Score = 39.3 bits (90), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 16/140 (11%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T+L ++ + +VIAG+ +++ V+ N RKV + K ++ GFAG DA ++ L
Sbjct: 21 TVLGIKANNGIVIAGEKRLTYDGYVLSKNTRKVHPITK-HVGIGFAGLVGDAQFIIRALR 79
Query: 77 KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD------VLEP 130
+ E Y QL R + + K L L +A +V+ G D VL+P
Sbjct: 80 LEAENYKLQLERE----IRVRGLAKILSLLLYSYKLAPLMTEIVVGGYDDKGPQIYVLDP 135
Query: 131 -----ENGVMAIGSGGSYAL 145
E+ +A+GSGG AL
Sbjct: 136 VGSLIEDKYVALGSGGPIAL 155
>gi|332159619|ref|YP_004424898.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
gi|331035082|gb|AEC52894.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
Length = 204
Score = 39.3 bits (90), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 17/182 (9%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TT+ V KDGVV +A D + SLG V N K+ ++ + IAG AG D L+ L
Sbjct: 9 TTVGIVCKDGVV-LAADRRASLGNIVYARNVTKIHKIDEHLAIAG-AGDVGDILNLVRLL 66
Query: 76 EKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA---DKTITLVITGMGD 126
+ + Y Q R + LA KY + A L+ +K + +G
Sbjct: 67 RAEAKLYYAQFGREMSARALATLLANILNGYKYFPYM-AWFLVGGYDEKARLYSVDAVGG 125
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLE 183
+ E+ MA GSG +A S A S + +E +A KA++ A V++ I++
Sbjct: 126 I--TEDKYMAAGSGMEFAYSILDAEYSDDITVKEGVKLAVKAINTAIKRDVFSGDGILVV 183
Query: 184 TL 185
T+
Sbjct: 184 TI 185
>gi|58220850|dbj|BAB83845.1| PSMB9 [Oryzias latipes]
gi|295901522|dbj|BAJ07278.1| proteasome subunit, beta type 9 [Oryzias latipes]
Length = 216
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + +G VV+ D +VS G +V+ K+ L I +GS+ADA T+ E
Sbjct: 17 GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEM 75
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA 113
+ +L+ + ++ +RS+ L K+ KY L A +++A
Sbjct: 76 VNYQLDVHSLEIDEDPQVRSAATLVKNISY-KYKEELSAHLIVA 118
>gi|145350076|ref|XP_001419449.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579680|gb|ABO97742.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 227
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T+L V + V+ A D ++S G +++ N KV ++ ++A AG ADA TL + L+
Sbjct: 21 TVLAVAGENYVICASDTRMSTGYSILTRNYEKVDQMSPKTLMAS-AGFMADAQTLKKTLK 79
Query: 77 KKLEQYPNQ 85
+ +QY Q
Sbjct: 80 ARCKQYEFQ 88
>gi|224473831|gb|ACN49170.1| antigen processing proteasome-associated protein [Oryzias
luzonensis]
Length = 216
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + +G VV+ D +VS G +V+ K+ L I +GS+ADA T+ E
Sbjct: 17 GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEM 75
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA 113
+ +L+ + ++ +RS+ L K+ KY L A +++A
Sbjct: 76 VNYQLDVHSLEIGEDPQVRSAATLVKNISY-KYKEELSAHLIVA 118
>gi|21263862|sp|Q8UW64|PSB9_ORYLA RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; Flags: Precursor
gi|18478982|dbj|BAB84548.1| PSMB9 [Oryzias latipes]
gi|62122593|dbj|BAD93261.1| PSMB9 [Oryzias latipes]
gi|295901494|dbj|BAJ07258.1| proteasome subunit, beta type 9 [Oryzias latipes]
gi|295901520|dbj|BAJ07277.1| proteasome subunit, beta type 9 [Oryzias latipes]
gi|295901524|dbj|BAJ07279.1| proteasome subunit, beta type 9 [Oryzias latipes]
Length = 217
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + +G VV+ D +VS G +V+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA 113
+ +L+ + ++ +RS+ L K+ KY L A +++A
Sbjct: 77 VNYQLDVHSLEIDEDPQVRSAATLVKNISY-KYKEELSAHLIVA 119
>gi|77735723|ref|NP_001029560.1| proteasome subunit beta type-9 precursor [Bos taurus]
gi|108860909|sp|Q3SZC2|PSB9_BOVIN RecName: Full=Proteasome subunit beta type-9; AltName:
Full=Proteasome subunit beta-1i; Flags: Precursor
gi|63169163|gb|AAY34699.1| proteosome subunit beta type 9 [Bos taurus]
gi|74267808|gb|AAI02964.1| Proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Bos taurus]
gi|296474568|gb|DAA16683.1| proteasome subunit beta type-9 precursor [Bos taurus]
Length = 219
Score = 38.9 bits (89), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
GD A ++H TTI+ V DG VV+ D +VS G+ V+ K+ L + +I +G
Sbjct: 9 GDLPRAGEVHTGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQ-HIYCALSG 67
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA 113
S+ADA + + +LE + +L + LA + KY +L A +++A
Sbjct: 68 SAADAQAIADMAAYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVA 121
>gi|124514849|gb|EAY56360.1| putative 20S proteasome beta-subunit [Leptospirillum rubarum]
Length = 265
Score = 38.9 bits (89), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 2 VVMGDKHYA---VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
V G +H V+ ATTIL G V++AGD + + G +M KV + +++
Sbjct: 24 VAPGPRHSPEGWVETRATTILAFHFSGGVLVAGDRRATAGNRIMTNRVEKVLEIDGSSLM 83
Query: 59 AGFAGSSADAFTLLERLEKKLEQY-PNQLLRSSVE 92
A AGS A A + LE + Y +QL SVE
Sbjct: 84 A-IAGSPAFAIEMARILEHSFKYYRRSQLAELSVE 117
>gi|2055311|dbj|BAA19766.1| LMP2 [Oryzias latipes]
Length = 213
Score = 38.9 bits (89), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ + +G VV+ D +VS G +V+ K+ L I +GS+ADA T+ E +
Sbjct: 15 TTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPL-HDRIYCALSGSAADAQTIAEMV 73
Query: 76 EKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA 113
+L+ + ++ +RS+ L K+ KY L A +++A
Sbjct: 74 NYQLDVHSLEIDEDPQVRSAATLVKNISY-KYKEELSAHLIVA 115
>gi|83816981|ref|NP_001033050.1| proteasome subunit beta type-9 [Sus scrofa]
gi|311260176|ref|XP_003128374.1| PREDICTED: proteasome subunit beta type-9-like [Sus scrofa]
gi|83320492|gb|ABC02872.1| proteasome beta 9 subunit [Sus scrofa]
gi|84514209|gb|ABC59113.1| proteasome beta 9 subunit [Sus scrofa]
gi|110276961|gb|ABG57117.1| proteasome beta 9 subunit [Sus scrofa]
gi|147225182|emb|CAN13314.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional protease 2) [Sus scrofa]
Length = 219
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
GD A ++H TTI+ V DG VV+ D +VS G+ V+ K+ L I +G
Sbjct: 9 GDLPRAGEVHTGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPL-HHRIYCALSG 67
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA---DKT 116
S+ADA + + +LE + +L + LA + KY +L A +++A +
Sbjct: 68 SAADAQAIADMAAYQLELHGMELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQRE 127
Query: 117 ITLVITGMGDVL--EPENGVMAI-GSGGSYALSAARALMSTQNSAEEIAR 163
V MG +L +P AI GSG +Y A S EE R
Sbjct: 128 GGQVYGTMGGMLIRQP----FAIGGSGSTYIYGYVDAAYKPGMSPEECRR 173
>gi|308807300|ref|XP_003080961.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
gi|116059422|emb|CAL55129.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
Length = 233
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T+L V + V+ AGD ++S G ++ K+ ++ ++A AG +ADA TL + L+
Sbjct: 27 TVLAVAGESYVICAGDTRMSSGYNILTRKFEKIDKMSGKTLMAS-AGFAADAVTLKKTLK 85
Query: 77 KKLEQYPNQLLR 88
+ +QY Q R
Sbjct: 86 ARCKQYEFQNKR 97
>gi|145483595|ref|XP_001427820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145552816|ref|XP_001462083.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394903|emb|CAK60422.1| unnamed protein product [Paramecium tetraurelia]
gi|124429921|emb|CAK94710.1| unnamed protein product [Paramecium tetraurelia]
Length = 239
Score = 38.5 bits (88), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T+L V G V++AGD ++S G ++ +A K+ +L ++A AG AD L + L+
Sbjct: 38 TVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVLAT-AGQYADFIALRKFLQ 96
Query: 77 KKLEQYPNQ 85
++L+ Y Q
Sbjct: 97 QRLQLYEFQ 105
>gi|300176555|emb|CBK24220.2| unnamed protein product [Blastocystis hominis]
Length = 227
Score = 38.5 bits (88), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 16/174 (9%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
+T+L ++ V++ D S G M N +++ L K N+I GF G +D ++E L
Sbjct: 27 STVLAMKYRDGVMMCTDTLASYGSMSMFKNVQRMYVL-KNNVIIGFDGEYSDFAHIVEEL 85
Query: 76 EKKLE----QYPNQLLR--SSVELAKDW------RMDKYLRNLEAMILIADKTITLVITG 123
EK L+ Q N +L S+ + W +M+ + + L K ++
Sbjct: 86 EKILDESIFQDDNSMLTAASTFNFLRAWLYNQRTKMEPLWNTIVVIGLENQKPFLGIVDK 145
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTN 177
+G E EN A G + L R+L ++ EE AR + A + Y N
Sbjct: 146 LGAAYE-EN-FTATSFGLYFCLPLLRSLYR-EDMTEEEARATLEECARVGYYRN 196
>gi|154251477|ref|YP_001412301.1| amidohydrolase 3 [Parvibaculum lavamentivorans DS-1]
gi|154155427|gb|ABS62644.1| Amidohydrolase 3 [Parvibaculum lavamentivorans DS-1]
Length = 578
Score = 38.5 bits (88), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 12 KMHATTILTVRKDGVVVIAG--------DGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
K+ T TV +G VV G DGQVS + ++ V GN GFA
Sbjct: 35 KVEGTAKCTVDAEGAVVTPGFVDIHTHYDGQVSWDAMLAPSSINGVTSTAMGNCGVGFAP 94
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW 97
+ AD L RL + +E P L L DW
Sbjct: 95 ARADKHDFLIRLLEGVEDIPGTALHEG--LTWDW 126
>gi|322489333|emb|CBZ24592.1| putative proteasome beta-1 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 283
Score = 38.5 bits (88), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL V G VV+A D + S G V+ + K+ +L K I +GS+AD L ER+
Sbjct: 55 TTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTK-KIYCCRSGSAADTQALAERV 113
Query: 76 EKKLEQY 82
L Y
Sbjct: 114 SNYLGSY 120
>gi|46198381|ref|YP_004048.1| methyltransferase [Thermus thermophilus HB27]
gi|46196003|gb|AAS80421.1| methyltransferase [Thermus thermophilus HB27]
Length = 500
Score = 38.5 bits (88), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
L+++L+ YP Q L VE LR E +++ +T LV +G L P +
Sbjct: 67 LKRRLQGYPLQYLVGEVEF-----FGLPLRVEEGVLIPRPETEGLVELALGLPLPPAPRI 121
Query: 135 MAIGSG-GSYALSAARALMSTQNSAEEIARKAMSIA 169
+ +G+G G+ AL+ RAL + A E+ KA+++A
Sbjct: 122 LDVGTGTGAIALALKRALPEAEVYATEVDPKALALA 157
>gi|55980410|ref|YP_143707.1| HemK family methyltransferase [Thermus thermophilus HB8]
gi|55771823|dbj|BAD70264.1| methyltransferase, HemK family [Thermus thermophilus HB8]
Length = 500
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
L+++L+ YP Q L VE LR E +++ +T LV +G L P +
Sbjct: 67 LKRRLQGYPLQYLVGEVEF-----FGLPLRVEEGVLIPRPETEGLVELALGLPLPPAPRI 121
Query: 135 MAIGSG-GSYALSAARALMSTQNSAEEIARKAMSIA 169
+ +G+G G+ AL+ RAL + A E+ KA+++A
Sbjct: 122 LDVGTGTGAIALALKRALPEAEVYATEVDPKALALA 157
>gi|291395997|ref|XP_002714703.1| PREDICTED: proteasome beta 9 subunit [Oryctolagus cuniculus]
Length = 219
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
GD +A ++H TTI+ V DG VV+ D +VS GQ V+ K+ L + I +G
Sbjct: 9 GDLPWAGEVHTGTTIMAVEFDGGVVVGSDSRVSAGQAVVNRVFDKLSPLHQ-RIYCALSG 67
Query: 64 SSADA 68
S+ADA
Sbjct: 68 SAADA 72
>gi|206603968|gb|EDZ40448.1| Putative 20S proteasome beta-subunit [Leptospirillum sp. Group II
'5-way CG']
Length = 265
Score = 38.1 bits (87), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 5 GDKHYA---VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
G +H+ + ATTIL G V++AGD + + G +M KV + +++A
Sbjct: 27 GPRHFPEGWSETRATTILAFHFSGGVLVAGDRRATAGNRIMTNRVEKVLEIDGSSLMA-I 85
Query: 62 AGSSADAFTLLERLEKKLEQY-PNQLLRSSVE 92
AGS A A + LE + Y +QL SVE
Sbjct: 86 AGSPAFAIEMARILEHSFKYYRRSQLAELSVE 117
>gi|317507302|ref|ZP_07965044.1| proteasome A-type and B-type [Segniliparus rugosus ATCC BAA-974]
gi|316254405|gb|EFV13733.1| proteasome A-type and B-type [Segniliparus rugosus ATCC BAA-974]
Length = 279
Score = 38.1 bits (87), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 17/174 (9%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G V+IAGD + + G + +KV L AG AG+ A AF L+
Sbjct: 55 HGTTIVALTYAGGVLIAGDRRATSGNLISHDEMQKVY-LTDEYSAAGIAGTVAIAFELVR 113
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLR-NLEAMI-----------LIAD----KTI 117
+LE Y + K R+ +R NLEA + L D K
Sbjct: 114 LFAVELEHYEKVEGVALTFSGKANRLAAMVRGNLEAAMQGLAAVPLLVGLDPDDAEPKGR 173
Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
+ G E ++G +IGSGG +A S + L Q R A+ AD
Sbjct: 174 IVSYDAAGGRFEEQSGYHSIGSGGLFARSTLKRLHDPQADRTAALRAAVEALAD 227
>gi|115376708|ref|ZP_01463935.1| hypothetical protein STIAU_5350 [Stigmatella aurantiaca DW4/3-1]
gi|310822897|ref|YP_003955255.1| hypothetical protein STAUR_5665 [Stigmatella aurantiaca DW4/3-1]
gi|115366257|gb|EAU65265.1| hypothetical protein STIAU_5350 [Stigmatella aurantiaca DW4/3-1]
gi|309395969|gb|ADO73428.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 856
Score = 38.1 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 98 RMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGS 142
R DK++ A+ + AD T+ +V TGM VLE NGV++I +G S
Sbjct: 711 RADKWMYRPSAVAVAADGTLYVVETGMARVLEVRNGVVSIIAGSS 755
>gi|224827139|ref|ZP_03700235.1| 20S proteasome A and B subunits [Lutiella nitroferrum 2002]
gi|224600648|gb|EEG06835.1| 20S proteasome A and B subunits [Lutiella nitroferrum 2002]
Length = 195
Score = 38.1 bits (87), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLG--QTVM---KANARKVRRLGKGNIIAGFAGSSADAFT 70
TTI+ V+K + IA D Q + G Q ++ + K+ R +G+ AGS+A
Sbjct: 2 TTIVVVKKGSQIAIAADSQTTFGDDQKLLAGYDPHHNKIFR--QGDSYLAIAGSAAHDLV 59
Query: 71 L---LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR----------NLEAMILIADKTI 117
L L+ + K L + +L + YLR + + M+++A+
Sbjct: 60 LQSVLKGVHNKDFSSRQGLFDTFRKLHPKLKEQFYLRPEEEEDDPYESSQMMVVVANVHG 119
Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTN 177
+ M +V E AIGSG +A+ A SAEEIAR + + V ++
Sbjct: 120 IFGVYPMREVYEFSR-FWAIGSGRKFAMGAMYVAYEQDLSAEEIARIGIQAGCEFDVSSS 178
Query: 178 HNIVLETL 185
+ L T+
Sbjct: 179 LPMTLYTI 186
>gi|302688009|ref|XP_003033684.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune
H4-8]
gi|300107379|gb|EFI98781.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune
H4-8]
Length = 274
Score = 38.1 bits (87), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T+L + VIAGD + S G + A KV RL ++A G +AD T +++L+
Sbjct: 24 TVLAIAGSDFSVIAGDTRQSEGYNIQTRYAPKVHRLTNKAVLA-VTGFAADGNTFVKKLK 82
Query: 77 KKLEQY 82
++LE Y
Sbjct: 83 QRLEWY 88
>gi|256391621|ref|YP_003113185.1| 20S proteasome A and subunit betas [Catenulispora acidiphila DSM
44928]
gi|302595822|sp|C7PVV2|PSB_CATAD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|256357847|gb|ACU71344.1| 20S proteasome A and B subunits [Catenulispora acidiphila DSM
44928]
Length = 288
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H TTI+++ G V++AGD + ++G + + + KV + + + G AGS+ A
Sbjct: 56 IAPHGTTIVSIAFPGGVLLAGDRRATMGNFIAQRDIEKVFPADEFSAV-GIAGSAGLAVE 114
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI--------T 122
++ + +LE Y V L+ D + ++ + + +A + + +V T
Sbjct: 115 VVRLFQLELEHYEKI---EGVTLSTDGKANRLATMIRGNLAMAMQGLAVVPLFAGYDEET 171
Query: 123 GMGDVLE--------PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
G G + E+ ++GSG +A A + L +AE+ A A+
Sbjct: 172 GQGRIFSYDVTGGMYEEHDFYSVGSGSMFARGALKKLFRPDFTAEDAAVAAV 223
>gi|34497454|ref|NP_901669.1| hypothetical protein CV_1999 [Chromobacterium violaceum ATCC 12472]
gi|34103309|gb|AAQ59671.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 196
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 17/188 (9%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLG---QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL- 71
TTI+ VRK + IA D Q + G + + + + G+ +GS+A L
Sbjct: 2 TTIVAVRKGDQIAIAADSQTTFGDDQKLLAPYDCFHNKIFRHGDSYLAVSGSAAHDLVLQ 61
Query: 72 --LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR----------NLEAMILIADKTITL 119
L+ L+KK + + +L + YLR + + M++IA+
Sbjct: 62 GALKELKKKDLSSRQGIFDTFRKLHPKLKDAFYLRPEEDEEDPYESSQMMVVIANAHGIF 121
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHN 179
+ M ++ E + AIGSG +A+ A A+ SA EIA + + V ++
Sbjct: 122 GVYPMREIYEFSR-IWAIGSGRKFAMGAMYAVYDQDLSAREIAEIGVRAGCEFDVSSSLP 180
Query: 180 IVLETLKV 187
+ + T++V
Sbjct: 181 MTVYTVEV 188
>gi|254581944|ref|XP_002496957.1| ZYRO0D12034p [Zygosaccharomyces rouxii]
gi|238939849|emb|CAR28024.1| ZYRO0D12034p [Zygosaccharomyces rouxii]
Length = 261
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V+ D VVIA D + + G V N K+ R+ AG AG++AD + + +
Sbjct: 30 TTIVGVKYDKGVVIAADTRSTQGPIVADKNCAKLHRMAPRIWCAG-AGTAADTEAVTQLI 88
Query: 76 EKKLE---QYPNQLLR--SSVELAKDWRMDKYLRNLEAMILIA 113
LE QY N+ R S++++ K + +Y ++ A +++A
Sbjct: 89 GSNLELHSQYANREPRVVSALQMLKQ-HLFRYQGHIGAYLIVA 130
>gi|316934300|ref|YP_004109282.1| 20S proteasome subunits A/B [Rhodopseudomonas palustris DX-1]
gi|315602014|gb|ADU44549.1| 20S proteasome A and B subunits [Rhodopseudomonas palustris DX-1]
Length = 153
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 25/149 (16%)
Query: 23 KDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE--KKL 79
+DGV +A DG+V+ G + ++ N +K+RRL G++ A G L+E LE ++
Sbjct: 7 RDGV--LAADGRVTYGGSLILTDNCKKIRRLSDGSLFA-LCGDPVLEERLIEWLENCEEG 63
Query: 80 EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGVMAIG 138
E P Q ++ A+++ D ++ G GD P +G A G
Sbjct: 64 ESPPPQG-----------------KDFTAILVDHDGALS-TYEGSGDRFMPMYDGFAAFG 105
Query: 139 SGGSYALSAARALMSTQNSAEEIARKAMS 167
SG +A A + + + + AR+ +S
Sbjct: 106 SGMDFAYGAMEVGATAEEAVKAAARRNVS 134
>gi|117928395|ref|YP_872946.1| proteasome subunit beta [Acidothermus cellulolyticus 11B]
gi|302595815|sp|A0LU50|PSB_ACIC1 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|117648858|gb|ABK52960.1| proteasome endopeptidase complex, beta component [Acidothermus
cellulolyticus 11B]
Length = 290
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G VV+AGD + ++G + + + KV + + + + G AGS+ A ++
Sbjct: 57 HGTTIVAVAYQGGVVMAGDRRATMGNVIAQRDIEKVFQTDEHSCV-GIAGSAGIALEVVR 115
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 116 LFQVELEHY 124
>gi|326329709|ref|ZP_08196030.1| proteasome, beta subunit [Nocardioidaceae bacterium Broad-1]
gi|325952474|gb|EGD44493.1| proteasome, beta subunit [Nocardioidaceae bacterium Broad-1]
Length = 278
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 16/158 (10%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H TTI+ G V+IAGD + + G + + + RKV + + + G AGS+ A
Sbjct: 43 IAPHGTTIVAATFPGGVIIAGDRRATQGNLIAERDMRKVFPADEYSAV-GIAGSAGLAVE 101
Query: 71 LLERLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLRNLEAMILIADKTITLVI-----TGM 124
L++ + +LE Y ++ +++ + K R+ +R AM + + L + G+
Sbjct: 102 LVKLFQTELEHY-EKIEGTTLSIEGKASRLSALVRGNLAMAMQGLVVVPLFVGFDPDAGV 160
Query: 125 GDV--LEP------ENGVMAIGSGGSYALSAARALMST 154
G + +P + G +GSG +A A + L T
Sbjct: 161 GKIYGYDPTGGRYEQTGYAGVGSGSLFAKGALKKLYRT 198
>gi|84496445|ref|ZP_00995299.1| putative 20S proteasome beta-subunit [Janibacter sp. HTCC2649]
gi|84383213|gb|EAP99094.1| putative 20S proteasome beta-subunit [Janibacter sp. HTCC2649]
Length = 280
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+T+ +G V++AGD + ++G + + KV + +++ G AG++ A L+
Sbjct: 50 HGTTIVTLSYEGGVLMAGDRRATMGNIIANRDMEKVFATDEFSVV-GIAGTAGLAIELVR 108
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 109 LFQVELEHY 117
>gi|18124169|gb|AAL59852.1|AF357920_1 proteasome beta-subunit [Ginglymostoma cirratum]
Length = 217
Score = 37.7 bits (86), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V DG VVI D +VS G+ + K+ L I +GS+ADA + + +
Sbjct: 19 TTIIAVEFDGGVVIGSDSRVSAGEAICNRVMNKLSPL-HDRIYCALSGSAADAQAIADSV 77
Query: 76 EKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA 113
+LE + + L++++ + K+ KY L A +++A
Sbjct: 78 NYQLELHSIETGDAPLVQAAASVVKNISY-KYKEELTAHLIVA 119
>gi|297290556|ref|XP_001108087.2| PREDICTED: proteasome subunit beta type-9-like isoform 1 [Macaca
mulatta]
gi|146157613|gb|ABQ08185.1| proteasome subunit beta type 9-like protein [Macaca fascicularis]
Length = 219
Score = 37.7 bits (86), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
GD A ++H TTI+ V DG VV+ D +VS G+ V+ K+ L + I +G
Sbjct: 9 GDLPRAGEVHTGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQ-RIYCALSG 67
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA--DKTI 117
S+ADA + + +LE + +L + LA + KY +L A +++A D+
Sbjct: 68 SAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQHE 127
Query: 118 TLVITG-MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
+ G +G +L + + GSG +Y A S EE R
Sbjct: 128 GGQVYGTLGGMLTRQPFAIG-GSGSTYIYGYVDAAYKPGMSPEECRR 173
>gi|322497326|emb|CBZ32401.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 283
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 17/144 (11%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL V G VV+A D + S G V+ + K+ +L + I +GS+AD L ER+
Sbjct: 55 TTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTE-KIYCCRSGSAADTQALAERV 113
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-- 133
L Y ++ D + M + I+ I G +P NG
Sbjct: 114 SNYLGSY-------QTDIGADVNVATAANLFHKMCYVNRWNISAGIIVAG--YDPINGGS 164
Query: 134 VMAIGSGGS-----YALSAARALM 152
V +I SGGS YAL + ++
Sbjct: 165 VYSIPSGGSCVKLDYALGGSGSIF 188
>gi|146079452|ref|XP_001463791.1| hypothetical protein [Leishmania infantum JPCM5]
gi|321399047|emb|CAM66312.2| putative proteasome beta-1 subunit [Leishmania infantum JPCM5]
Length = 283
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 17/144 (11%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL V G VV+A D + S G V+ + K+ +L + I +GS+AD L ER+
Sbjct: 55 TTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTE-KIYCCRSGSAADTQALAERV 113
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-- 133
L Y ++ D + M + I+ I G +P NG
Sbjct: 114 SNYLGSY-------QTDIGADVNVATAANLFHKMCYVNRWNISAGIIVAG--YDPINGGS 164
Query: 134 VMAIGSGGS-----YALSAARALM 152
V +I SGGS YAL + ++
Sbjct: 165 VYSIPSGGSCVKLDYALGGSGSIF 188
>gi|157865801|ref|XP_001681607.1| proteasome beta-1 subunit [Leishmania major strain Friedlin]
gi|68124905|emb|CAJ02350.1| putative proteasome beta-1 subunit [Leishmania major strain
Friedlin]
Length = 283
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 17/144 (11%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL V G VV+A D + S G V+ + K+ +L + I +GS+AD L ER+
Sbjct: 55 TTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTE-KIYCCRSGSAADTQALAERV 113
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-- 133
L Y ++ D + M + I+ I G +P NG
Sbjct: 114 SNYLGSY-------QTDIGADVNVATAANLFHKMCYVNRWNISAGIIVAG--YDPINGGS 164
Query: 134 VMAIGSGGS-----YALSAARALM 152
V +I SGGS YAL + ++
Sbjct: 165 VYSIPSGGSCVKLDYALGGSGSIF 188
>gi|121604685|ref|YP_982014.1| 20S proteasome subunits A/B [Polaromonas naphthalenivorans CJ2]
gi|120593654|gb|ABM37093.1| 20S proteasome, A and B subunits [Polaromonas naphthalenivorans
CJ2]
Length = 196
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 29/196 (14%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM----KANARKVR-RLGKGNIIAGFAGSSADAFT 70
TT++ V+K G V IA D V+ G T + +AN++ + G + G AG+ A F
Sbjct: 2 TTLVVVKKAGQVAIAADTLVTFGDTCLTQRFEANSKIFKVETPDGESLIGMAGTVAH-FP 60
Query: 71 LL------------------ERLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLRNLEAMIL 111
+L E + L+ +P LL+ S L +K+ D Y + + +L
Sbjct: 61 VLRKAMATLPKEQLKLGSREEVFDTFLKLHP--LLKESFFLQSKEDDNDPY-ESSQFTVL 117
Query: 112 IADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
IA+ + + +V E + +GSG S+AL A A +A E+A ++ +
Sbjct: 118 IANASGIYGLYSYREVFEFKE-FWGVGSGRSFALGAMHASWGKARTAREVAMAGLNAGCE 176
Query: 172 ICVYTNHNIVLETLKV 187
+ I + TLK+
Sbjct: 177 FDKNSGGPIDVFTLKL 192
>gi|156836420|ref|XP_001642274.1| hypothetical protein Kpol_218p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112761|gb|EDO14416.1| hypothetical protein Kpol_218p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 261
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V+ DG VVIA D + + G V N K+ R+ AG AG++AD + + +
Sbjct: 30 TTIVGVKFDGGVVIAADTRSTQGPIVADKNCAKLHRIAPRIWCAG-AGTAADTEAVTQLI 88
Query: 76 EKKLE---QYPNQLLR--SSVELAKDWRMDKYLRNLEAMILIA 113
+E Y N+ R S++++ K + KY ++ A +++A
Sbjct: 89 GSNIELHSLYSNREPRVVSALQMLKQ-HLFKYQGHIGAYLIVA 130
>gi|67473671|ref|XP_652586.1| proteasome subunit beta Type 4 precursor [Entamoeba histolytica
HM-1:IMSS]
gi|56469453|gb|EAL47200.1| proteasome subunit beta Type 4 precursor, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 225
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
V + ++L ++ +G V+IA D S G + + +V +LGK IIAG +G +D
Sbjct: 15 VVLGTASVLGIKYEGGVLIAADTLGSYGSMALFKDLERVIKLGKYTIIAG-SGEYSDFIE 73
Query: 71 LLERLEKKL 79
L E L+KK+
Sbjct: 74 LNETLQKKV 82
>gi|194207140|ref|XP_001918357.1| PREDICTED: similar to proteasome subunit beta5t [Equus caballus]
Length = 299
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L R V+ A D + S G V +RKV + + ++++ +G+SAD T
Sbjct: 48 HGTTTLAFRFRHGVIAAADTRSSCGNYVACPASRKVIPVHQ-HLLSTTSGTSADCATWYR 106
Query: 74 RLEKKLE-------QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA----DKTITLVIT 122
L+++L Q P+ + S+ +L M + R L+ + A D++ +
Sbjct: 107 VLQRELRLRALREGQLPS--VASAAKLLSA--MMSHYRGLDLCVATALCGWDRSGPALFY 162
Query: 123 GMGDVLEPENGVMAIGSGGSYALS----AARALMSTQNSAEEIARKAMSIAADICVYTNH 178
D + + ++GSG YA R M+TQ A +AR A++ A Y+
Sbjct: 163 VYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDMTTQE-AYALARCAVAHATHRDAYSGG 221
Query: 179 NIVL 182
++ L
Sbjct: 222 SVDL 225
>gi|183233581|ref|XP_001913879.1| calcium-dependent protein kinase 2 [Entamoeba histolytica
HM-1:IMSS]
gi|169801508|gb|EDS89346.1| calcium-dependent protein kinase 2, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 413
Score = 37.4 bits (85), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
++L ++ +G V+IA D S G + + +V +LGK IIAG +G +D L E L+
Sbjct: 209 SVLGIKYEGGVLIAADTLGSYGSMALFKDLERVIKLGKYTIIAG-SGEYSDFIELNETLQ 267
Query: 77 KKL 79
KK+
Sbjct: 268 KKV 270
>gi|149912217|ref|ZP_01900796.1| ATP-dependent protease peptidase subunit [Moritella sp. PE36]
gi|149804697|gb|EDM64748.1| ATP-dependent protease peptidase subunit [Moritella sp. PE36]
Length = 41
Score = 37.4 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 147 AARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
A L +T+ AEEIA+KA++IA +ICV+TN +ET+
Sbjct: 1 AMALLENTELDAEEIAKKALTIAGNICVFTNGFHTIETI 39
>gi|154419010|ref|XP_001582522.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121916758|gb|EAY21536.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 256
Score = 37.4 bits (85), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L+ +G +V+A D + + GQ + K+ L N+I AG +AD L
Sbjct: 51 VHGTTTLSFIYNGGIVVAVDSRATGGQFIFSQTVMKILPLAP-NMIGTMAGGAADCQYWL 109
Query: 73 ERLEKKLE------QYPNQLLRSSVELAKD-WRMDKYLRNLEAMILIADKT--ITLVITG 123
L + ++ Q P + +S L + +R Y ++ +MI D T I
Sbjct: 110 RNLSRLIQLHKFRYQQPLTVAAASKILVNELYRYKGYNLSIGSMICGYDNTGPHIFYIDN 169
Query: 124 MGDVLEPENGVMAIGSGGSYAL----SAARALMSTQNSAEEIARKAM 166
G + + ++GSG ++A + R M T+ A E+ R+A+
Sbjct: 170 HGSRIAGKR--FSVGSGSTHAYGVLDTCYREDM-TKEEACELGRRAI 213
>gi|309807631|ref|ZP_07701575.1| ATP-dependent protease subunit ClpQ domain protein [Lactobacillus
iners LactinV 01V1-a]
gi|308169128|gb|EFO71202.1| ATP-dependent protease subunit ClpQ domain protein [Lactobacillus
iners LactinV 01V1-a]
Length = 41
Score = 37.4 bits (85), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARK 48
TTI VR G + IAGDGQV+LG+ V+ K+ A+K
Sbjct: 2 TTICAVRHKGKIAIAGDGQVTLGEKVIAKSTAKK 35
>gi|194223397|ref|XP_001493056.2| PREDICTED: similar to proteasome subunit beta type 9-like protein
[Equus caballus]
Length = 219
Score = 37.4 bits (85), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
GD A ++H TTI+ V DG VV+ D +VS G+ V+ K+ L I +G
Sbjct: 9 GDLPRAGEVHTGTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPL-HHRIYCALSG 67
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA---DKT 116
S+ADA + + +LE + +L + LA + KY +L A +++A +
Sbjct: 68 SAADAQAVADMAAYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQRE 127
Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
V +G +L + + GSG +Y A S EE R
Sbjct: 128 GGQVYGTLGGMLTRQPFAIG-GSGSTYIYGYVDAAYKQGMSPEECRR 173
>gi|314934849|ref|ZP_07842208.1| bacitracin synthetase 2 [Staphylococcus caprae C87]
gi|313652779|gb|EFS16542.1| bacitracin synthetase 2 [Staphylococcus caprae C87]
Length = 2388
Score = 37.4 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 15/88 (17%)
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW--------RMDKYLRNL------EAM 109
SS+ T++ER E ++EQYPNQ+ + + + R+ +YLR+ + +
Sbjct: 413 SSSHYQTVMERFEYQVEQYPNQIALQYEQQSMTYAELNHHVNRLAQYLRHTYHVQPNDII 472
Query: 110 ILIADKTITLVITGMGDVLEPENGVMAI 137
L+A+++I +VI GM +L+ G + I
Sbjct: 473 ALLAERSIEMVI-GMLGILKAGAGYLPI 499
>gi|223043707|ref|ZP_03613751.1| NAD dependent epimerase/dehydratase family [Staphylococcus capitis
SK14]
gi|222442985|gb|EEE49086.1| NAD dependent epimerase/dehydratase family [Staphylococcus capitis
SK14]
Length = 2388
Score = 37.4 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 15/88 (17%)
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW--------RMDKYLRNL------EAM 109
SS+ T++ER E ++EQYPNQ+ + + + R+ +YLR+ + +
Sbjct: 413 SSSHYQTVMERFEYQVEQYPNQIALQYEQQSMTYAELNHHVNRLAQYLRHTYHVQPNDII 472
Query: 110 ILIADKTITLVITGMGDVLEPENGVMAI 137
L+A+++I +VI GM +L+ G + I
Sbjct: 473 ALLAERSIEMVI-GMLGILKAGAGYLPI 499
>gi|72389907|ref|XP_845248.1| proteasome beta-1 subunit [Trypanosoma brucei TREU927]
gi|4218582|emb|CAA10283.1| proteasome beta-1 subunit [Trypanosoma brucei rhodesiense]
gi|62359956|gb|AAX80381.1| proteasome beta-1 subunit, putative [Trypanosoma brucei]
gi|70801783|gb|AAZ11689.1| proteasome beta-1 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261328641|emb|CBH11619.1| proteasome beta-1 subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 282
Score = 37.4 bits (85), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 26/136 (19%)
Query: 16 TTILTVR-KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V KDGVV +A D + S G V+ + K+ +L K I +GS+AD L E+
Sbjct: 55 TTIMAVSYKDGVV-LAADSRTSTGAYVVNRASNKLTKLAK-RIYCCRSGSAADTQALAEQ 112
Query: 75 LEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
LE Y P + ++ K M+K+ N+ A I++A
Sbjct: 113 TANYLESYETDISQPVNVATAANIFKKLCYMNKW--NITAGIIVAG-------------Y 157
Query: 129 EPENG--VMAIGSGGS 142
+P NG V +I +GG+
Sbjct: 158 DPLNGGSVYSIPTGGA 173
>gi|262202389|ref|YP_003273597.1| 20S proteasome A and subunit Bs [Gordonia bronchialis DSM 43247]
gi|302595826|sp|D0LDT1|PSB_GORB4 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|262085736|gb|ACY21704.1| 20S proteasome A and B subunits [Gordonia bronchialis DSM 43247]
Length = 292
Score = 37.4 bits (85), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 76/179 (42%), Gaps = 22/179 (12%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + ++G + + +KV + AG AG++ A ++
Sbjct: 61 HGTTIVAVSYPGGVILAGDRRATMGNLIATRDVKKVY-ITDEYSAAGIAGTAGIAIEMVR 119
Query: 74 RLEKKLEQY------PNQLLRSSVELAKDWR--MDKYLRNLEAMILIADKTIT------- 118
+LE Y P L LA R + L+ L A+ L+ I
Sbjct: 120 LFAVELEHYEKLEGVPLTLDGKVSRLASMVRGNLGAALQGLAAVPLLVGYDIDHDDPTER 179
Query: 119 ---LVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAAD 171
GD E G AIGSG +A S+ + L + SA IA +A+ AAD
Sbjct: 180 GRIFSFDVAGDRHEEFGGYQAIGSGSVFAKSSLKKLYRHDLDEASALAIAVEALYDAAD 238
>gi|317046497|ref|YP_004114145.1| inner-membrane translocator [Pantoea sp. At-9b]
gi|316948114|gb|ADU67589.1| inner-membrane translocator [Pantoea sp. At-9b]
Length = 423
Score = 37.4 bits (85), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 22/129 (17%)
Query: 20 TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
TVR + + V G G V L Q + K +R G G ++ GF GS+ L+ +
Sbjct: 42 TVRWNWIFV--GCGVVFLFQLLRPLFHGKFKRSGNGLVLPGFDGSTPKQKLLMVLMIVAA 99
Query: 80 EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-DVLEPENGVMAIG 138
+P + R SV+ IA T+ V+ G+G +V+ +G++ +G
Sbjct: 100 VIWPFLVSRGSVD-------------------IATLTLIYVMLGLGLNVVVGLSGLLVLG 140
Query: 139 SGGSYALSA 147
GG YA+ A
Sbjct: 141 YGGFYAIGA 149
>gi|284031156|ref|YP_003381087.1| 20S proteasome subunits A and B [Kribbella flavida DSM 17836]
gi|302595740|sp|D2Q4H4|PSB_KRIFD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|283810449|gb|ADB32288.1| 20S proteasome A and B subunits [Kribbella flavida DSM 17836]
Length = 279
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ DG VV+AGD + ++G + + + KV + + + G AGS+ A ++
Sbjct: 50 HGTTIVAATFDGGVVMAGDRRATMGNIIAQRDIEKVFPADEYSCV-GIAGSAGLAIEMVR 108
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 109 LFQVELEHY 117
>gi|196231444|ref|ZP_03130302.1| 20S proteasome A and B subunits [Chthoniobacter flavus Ellin428]
gi|196224297|gb|EDY18809.1| 20S proteasome A and B subunits [Chthoniobacter flavus Ellin428]
Length = 269
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
V+ ATTIL + G V++AGD + + G +++ A KV + +++A AG A A+
Sbjct: 44 VQTQATTILAFKFAGGVLVAGDRRATAGNSIVYDRADKVLEIDSHSLMA-IAGVPATAWE 102
Query: 71 LLERLEKKLEQY-PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
+ LE + Y +QL S+E K + K LR+ ++ V+ G+G V+
Sbjct: 103 MARVLEHSFQFYRRSQLQEMSLE-GKVRALSKLLRD----------NLSFVLQGVGVVV 150
>gi|70606469|ref|YP_255339.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|121697373|sp|Q4JAY3|PSB1_SULAC RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|68567117|gb|AAY80046.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
Length = 195
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 43/206 (20%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ AT I KDGVV +A + ++S G V+ +ARKV +LG+ IAG AG D TL
Sbjct: 3 ELPATAIGIKTKDGVV-LAAERRLSYGDFVLSKSARKVFKLGRFG-IAG-AGIVGDIQTL 59
Query: 72 LERLEKKLEQYP--NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT----LVITGMG 125
+ +++ Y N S+ AK L ++IL +K + L+ G+
Sbjct: 60 TRIMNVEIKYYEMYNSRKISARAAAK----------LLSVILYQNKVLPYISELLFGGVD 109
Query: 126 D------VLEP-----ENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAA- 170
+ +L+P E+ A+GSG A+ A + T +A+E+A K+M A
Sbjct: 110 EDGPKLFILDPIGSLIEDSYAAVGSGARVAIGVLEAEYNESLTSEAAKELAIKSMKSAVE 169
Query: 171 ---------DICVYTNHNIVLETLKV 187
DI + +NI + +K+
Sbjct: 170 RDVMSGDGIDILIINKNNIYEDFIKI 195
>gi|209878736|ref|XP_002140809.1| proteasome subunit beta type 6 precursor [Cryptosporidium muris
RN66]
gi|209556415|gb|EEA06460.1| proteasome subunit beta type 6 precursor, putative [Cryptosporidium
muris RN66]
Length = 213
Score = 37.0 bits (84), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 77/147 (52%), Gaps = 25/147 (17%)
Query: 13 MHATTILTVR-KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
M TT++ ++ +DG++ +A D + S+G V+ +ARK+ R+ I +GS++D T+
Sbjct: 14 MTGTTLVALKCRDGLI-LAADSRTSMGNMVVSRSARKITRI-TDKIFICRSGSASDTQTI 71
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK---TITLVITGMGDVL 128
++ + K + +EL ++ R+ K + +L +I +K T L++ G +
Sbjct: 72 VQYVRKLTADH-------ELELGEEARV-KSVASLARIICYQNKEYLTAGLIVAG----V 119
Query: 129 EPENG--VMAIGSGG-----SYALSAA 148
+P +G + I GG SYALS +
Sbjct: 120 DPYDGFKIFQIALGGSMIEKSYALSGS 146
>gi|296394010|ref|YP_003658894.1| 20S proteasome subunits AB [Segniliparus rotundus DSM 44985]
gi|296181157|gb|ADG98063.1| 20S proteasome A and B subunits [Segniliparus rotundus DSM 44985]
Length = 275
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 70/174 (40%), Gaps = 17/174 (9%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G V+IAGD + + G + +KV L AG AG+ A AF L+
Sbjct: 51 HATTIVALTYAGGVLIAGDRRATSGNLISHDEMQKV-YLTDEYSAAGIAGTVAIAFELVR 109
Query: 74 RLEKKLEQYPN------QLLRSSVELAKDWR--MDKYLRNLEAMILI--------ADKTI 117
+LE Y + LA R +D ++ L A+ L+ K
Sbjct: 110 LFTVELEHYEKVEGVALTFSGKANRLAAMVRGNLDAAMQGLAAVPLLIGLDPQDPEPKGR 169
Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
+ G E +G IGSGG +A S + L R A+ AD
Sbjct: 170 IVSYDAAGGRFEESSGYHCIGSGGLFARSTLKRLHDPDADRATALRSAVEALAD 223
>gi|145520811|ref|XP_001446261.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413738|emb|CAK78864.1| unnamed protein product [Paramecium tetraurelia]
Length = 239
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T+L + G V++AGD ++S G ++ +A K+ +L ++A AG AD L + L+
Sbjct: 38 TVLAIGIPGAVLVAGDTRLSNGYNILTRDATKLSQLTDKCVLAT-AGQYADFIALRKFLQ 96
Query: 77 KKLEQYPNQ 85
++L+ Y Q
Sbjct: 97 QRLQLYEFQ 105
>gi|330468523|ref|YP_004406266.1| 20S proteasome a and b subunits [Verrucosispora maris AB-18-032]
gi|328811494|gb|AEB45666.1| 20S proteasome a and b subunits [Verrucosispora maris AB-18-032]
Length = 266
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G VV+AGD + ++G + + + KV +++ G AG++ L+
Sbjct: 39 HATTIVAISAAGGVVMAGDRRATMGNLIAQRDIEKVHPADAYSLV-GIAGTAGIGIELMR 97
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 98 LFQVELEHY 106
>gi|302867419|ref|YP_003836056.1| 20S proteasome subunit A/B [Micromonospora aurantiaca ATCC 27029]
gi|302570278|gb|ADL46480.1| 20S proteasome A and B subunits [Micromonospora aurantiaca ATCC
27029]
Length = 266
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G VV+AGD + ++G + + + KV +++ G AG++ L+
Sbjct: 39 HATTIVAISAAGGVVMAGDRRATMGNLIAQRDIEKVHPADAYSLV-GIAGTAGIGIELMR 97
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 98 LFQVELEHY 106
>gi|325184015|emb|CCA18472.1| proteasome subunit beta putative [Albugo laibachii Nc14]
Length = 247
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T L + VVIAGD ++S G +++ N +K+++L +++A GS D L L+
Sbjct: 46 TALAIAGPDYVVIAGDSRLSTGYSILSRNEKKLQQLTSTSVLAS-PGSHNDVIQLRGMLQ 104
Query: 77 KKLEQY--PNQLLRSSVELAK 95
+++ Y NQ + S+ L++
Sbjct: 105 LQIQMYMHDNQAIISTENLSQ 125
>gi|238064537|ref|ZP_04609246.1| 20S proteasome A and B [Micromonospora sp. ATCC 39149]
gi|237886348|gb|EEP75176.1| 20S proteasome A and B [Micromonospora sp. ATCC 39149]
Length = 279
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G VV+AGD + ++G + + + KV +++ G AG++ L+
Sbjct: 52 HATTIVAISAAGGVVMAGDRRATMGNLIAQRDIEKVHPADAYSLV-GIAGTAGIGIELMR 110
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 111 LFQVELEHY 119
>gi|302564219|ref|NP_001181793.1| proteasome subunit beta type-9 [Macaca mulatta]
Length = 209
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V DG VV+ D +VS G+ V+ K+ L + I +GS+ADA + +
Sbjct: 11 TTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQ-RIYCALSGSAADAQAVADMA 69
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA--DKTITLVITG-MGDVL 128
+LE + +L + LA + KY +L A +++A D+ + G +G +L
Sbjct: 70 AYQLELHGIELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQHEGGQVYGTLGGML 129
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
+ + GSG +Y A S EE R
Sbjct: 130 TRQPFAIG-GSGSTYIYGYVDAAYKPGMSPEECRR 163
>gi|315506171|ref|YP_004085058.1| 20S proteasome a and b subunits [Micromonospora sp. L5]
gi|315412790|gb|ADU10907.1| 20S proteasome A and B subunits [Micromonospora sp. L5]
Length = 279
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G VV+AGD + ++G + + + KV +++ G AG++ L+
Sbjct: 52 HATTIVAISAAGGVVMAGDRRATMGNLIAQRDIEKVHPADAYSLV-GIAGTAGIGIELMR 110
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 111 LFQVELEHY 119
>gi|189219292|ref|YP_001939933.1| 20S proteasome, alpha subunit [Methylacidiphilum infernorum V4]
gi|189186150|gb|ACD83335.1| 20S proteasome, alpha subunit [Methylacidiphilum infernorum V4]
Length = 277
Score = 36.6 bits (83), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ +TTIL V++AGD + + G V+ A KV + + I+A AG+ A AF +
Sbjct: 55 IESTTILAFYYKEGVIVAGDRRATAGNLVIHERAEKVISIDRNTILA-VAGTPATAFEIA 113
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL 111
L+ E Y L+ AK + K L++ M L
Sbjct: 114 RVLQHSFEFYRRSQLQPLSVAAKVRMVSKLLKDNMPMSL 152
>gi|170088512|ref|XP_001875479.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164650679|gb|EDR14920.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 307
Score = 36.6 bits (83), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 23/189 (12%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA--FTL 71
H TT L R G V++A D + + G V +KV + ++ AG +AD +
Sbjct: 74 HGTTTLAFRFQGGVIVAVDSRATAGSYVASGTVKKVIEINP-YLLGTMAGGAADCQYWET 132
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKTITLV 120
+ +L + N+ R SV A KYL NL MI DKT V
Sbjct: 133 YLGMHCRLHELRNR-ERISVSAAS-----KYLSNLVYSYKGMGLSMGTMICGWDKTGPAV 186
Query: 121 ITGMGDVLEPENGVMAIGSGGSYA---LSAARALMSTQNSAEEIARKAMSIAADICVYTN 177
D + + ++GSG ++A L T A+E+ R+++ A ++
Sbjct: 187 FYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWDLTDAEAQELGRRSIYAAGHRDAFSG 246
Query: 178 HNIVLETLK 186
++ L +K
Sbjct: 247 NSCNLYHVK 255
>gi|217034382|ref|ZP_03439797.1| hypothetical protein HP9810_889g27 [Helicobacter pylori 98-10]
gi|216943177|gb|EEC22647.1| hypothetical protein HP9810_889g27 [Helicobacter pylori 98-10]
Length = 62
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
Query: 15 ATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRL 52
ATTIL R + +I GDGQV+LG V+KANA K ++L
Sbjct: 4 ATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKNQKL 45
>gi|308493735|ref|XP_003109057.1| CRE-PBS-3 protein [Caenorhabditis remanei]
gi|308247614|gb|EFO91566.1| CRE-PBS-3 protein [Caenorhabditis remanei]
Length = 204
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 12/155 (7%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T++ + D V IA D ++ T + + +KV ++ + G AG +DA T+LE++
Sbjct: 10 TVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKV-TDKVYVGLAGFQSDARTVLEKIM 68
Query: 77 KKLEQY---------PNQLLRSSVELAKDWRMDKYL-RNLEAMILIADKTITLVITGMGD 126
+ Y P L LA R Y L A + ++K + +G
Sbjct: 69 FRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDSNKPYICCMDTIGC 128
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
V P + V A+G+G Y L +E+
Sbjct: 129 VSAPRDFV-AVGTGQEYLLGVCENFWRENMKPDEL 162
>gi|194756194|ref|XP_001960364.1| GF13326 [Drosophila ananassae]
gi|190621662|gb|EDV37186.1| GF13326 [Drosophila ananassae]
Length = 229
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 10/154 (6%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V DG VVI D + S G V K+ R+ I +GS+AD + + +
Sbjct: 16 TTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRI-TDKIYCCRSGSAADTQAIADIV 74
Query: 76 EKKLEQYPNQLLRSSV--ELAKDWR--MDKYLRNLEAMILIA----DKTITLVITGMGDV 127
L Y NQ + ++ E A ++R Y +L A I++A ++ + +G +
Sbjct: 75 AYSLNYYENQTNKDALVHEAASEFRNFCYNYRDSLLAGIIVAGYDEERGGQVYSIPLGGM 134
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
L E + GSG S+ R S EE
Sbjct: 135 LTREACTIG-GSGSSFIYGFVREHYRQNMSKEEC 167
>gi|316978611|gb|EFV61583.1| conserved hypothetical protein [Trichinella spiralis]
Length = 382
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 5/156 (3%)
Query: 36 SLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAK 95
S G +V + + L K N G+ S ++E L + + + QL S ++
Sbjct: 145 SFGFSVDVWSENCEQSLSKANCWHGYCPESEFELEMIEELHEWYKTFAKQLADRSSVVSN 204
Query: 96 DWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
K L A + + I G L+ ++ + G S A S ++
Sbjct: 205 SRESFKTLNEFSAGNY---GNVIVQIVASGPSLKNNGWILRVWDGSSPATSFKLDSVNID 261
Query: 156 --NSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
+ EE++ KA + AAD+ +Y H V + LK GD
Sbjct: 262 GFTADEELSLKAENFAADVFLYDEHCTVAKALKPGD 297
>gi|326791674|ref|YP_004309495.1| beta-glucosidase [Clostridium lentocellum DSM 5427]
gi|326542438|gb|ADZ84297.1| Beta-glucosidase [Clostridium lentocellum DSM 5427]
Length = 696
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 2 VVMGDKHYAVKMHAT--TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA 59
VV H +V AT +I+ ++ +G++ + + ++G AN+RK +I
Sbjct: 321 VVESKPHLSVADEATAKSIVLLKNNGLLPLNKESIKTIGVIGPNANSRKA-------LIG 373
Query: 60 GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNL--EAMILIADK 115
+ G+S+ T+LE L+K++ L L D R++ Y R+ EA I+
Sbjct: 374 NYHGTSSQYITILEGLQKEVGDEVRILYSEGSHLYAD-RVEPLAYQRDRLSEAKIVAKHS 432
Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE 159
+ +V G+ + LE E G +G +YA R L + E
Sbjct: 433 DVVIVCVGLDETLEGEEG----DTGNAYASGDKRDLALPEPQQE 472
>gi|325963284|ref|YP_004241190.1| proteasome endopeptidase complex, beta component [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469371|gb|ADX73056.1| proteasome endopeptidase complex, beta component [Arthrobacter
phenanthrenivorans Sphe3]
Length = 272
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + +G V++AGD + ++G + + KV + +++ G AG++ A L
Sbjct: 48 HATTIVAMSYEGGVLMAGDRRATMGNVIASRHIEKVFPADRYSVL-GIAGTAGIAIDLTR 106
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 107 LFQVELEHY 115
>gi|84994864|ref|XP_952154.1| proteasome subunit y [Theileria annulata strain Ankara]
gi|65302315|emb|CAI74422.1| proteasome subunit y, putative [Theileria annulata]
Length = 294
Score = 36.2 bits (82), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 4 MGDKHYAVKMHATTILTVR-KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
M +K Y TTI+ ++ DGV+++A DG+ S GQ V ARK+ R+ NI +
Sbjct: 57 MLEKKYEDIQMGTTIIGMKFMDGVILVA-DGRTSSGQIVANRVARKITRI-LPNIFMLRS 114
Query: 63 GSSADAFTL 71
GS+AD+ TL
Sbjct: 115 GSAADSQTL 123
>gi|324524031|gb|ADY48349.1| Proteasome subunit beta type-3 [Ascaris suum]
Length = 205
Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
TIL + + V IA D ++ T + N +KV +LG + G G +DA T+L+++
Sbjct: 10 TILAMAGNECVCIATDLRLGEQMTTIATNVKKVHKLGD-RVYIGLGGFYSDAKTVLDKIL 68
Query: 77 KKLEQY---PNQLLRSSV------ELAKDWRMDKYLRN--LEAMILIADKTITLVITGMG 125
+ Y N+ ++ V L R YL + + + +K + +G
Sbjct: 69 FRKNLYELRENRKIKPEVAATMISNLLYQHRFGGYLTEPLVAGLDPVTNKAYICGMDTIG 128
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
+ P++ V A+G+G Y L +A+E+
Sbjct: 129 CIAAPKDFV-AVGTGTEYLLGVCEGFWHENMNADEL 163
>gi|238578402|ref|XP_002388706.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
gi|215450229|gb|EEB89636.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
Length = 165
Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 13/143 (9%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
TIL + VIAGD + S G ++ A KV RL ++A GFA AD +++
Sbjct: 24 TILAIGGANFSVIAGDTRQSEGYSIQTRYAPKVFRLTDKAVLAVNGFA---ADGNMFVKK 80
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG- 133
+ ++LE Y + AKD + R ++ M+ V +G + E +G
Sbjct: 81 VRQRLEWYRH-------AHAKDMPLRAIARLIQTMLYARRFFPYYVYNILGGIEEDGSGA 133
Query: 134 VMAIGSGGSYALSAARALMSTQN 156
V + GSY + RA + Q+
Sbjct: 134 VYSFDPVGSYERESCRAAGAAQS 156
>gi|71030968|ref|XP_765126.1| proteasome precursor [Theileria parva strain Muguga]
gi|68352082|gb|EAN32843.1| proteasome precursor, putative [Theileria parva]
Length = 279
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+GD +K+ T I +DGVV++A DG+ S GQ V ARK+ R+ NI +G
Sbjct: 44 LGD---GIKLGTTIIGMKFEDGVVLVA-DGRTSSGQIVANRVARKITRI-LPNIFMLRSG 98
Query: 64 SSADAFTL 71
S+AD+ TL
Sbjct: 99 SAADSQTL 106
>gi|17535357|ref|NP_494913.1| Proteasome Beta Subunit family member (pbs-3) [Caenorhabditis
elegans]
gi|17380195|sp|Q23237|PSB3_CAEEL RecName: Full=Proteasome subunit beta type-3; Short=Proteasome
subunit beta 3
gi|1280152|gb|AAA98018.1| Proteasome beta subunit protein 3, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 204
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T++ + D V IA D ++ T + + +KV ++ + G AG +DA T+LE++
Sbjct: 10 TVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKV-TDKVYVGLAGFQSDARTVLEKIM 68
Query: 77 KKLEQY---------PNQLLRSSVELAKDWRMDKYL-RNLEAMILIADKTITLVITGMGD 126
+ Y P L LA R Y L A + +K + +G
Sbjct: 69 FRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIGC 128
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
V P + V A+G+G Y L +E+
Sbjct: 129 VSAPRDFV-AVGTGQEYLLGVCENFWRENMKPDEL 162
>gi|145594775|ref|YP_001159072.1| 20S proteasome, A and B subunits [Salinispora tropica CNB-440]
gi|145304112|gb|ABP54694.1| 20S proteasome, A and B subunits [Salinispora tropica CNB-440]
Length = 324
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G VV+AGD + ++G + + + KV +++ G AG++ L
Sbjct: 97 HATTIVAIATAGGVVLAGDRRATMGNLIAQRDVEKVHPADAYSLV-GMAGAAGIGIELTR 155
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 156 LFQVELEHY 164
>gi|268530996|ref|XP_002630624.1| C. briggsae CBR-PBS-3 protein [Caenorhabditis briggsae]
gi|187037536|emb|CAP24202.1| CBR-PBS-3 protein [Caenorhabditis briggsae AF16]
Length = 204
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T++ + D V IA D ++ T + + +KV ++ + G AG +DA T+LE++
Sbjct: 10 TVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKV-TDKVYVGLAGFQSDARTVLEKIM 68
Query: 77 KKLEQY---------PNQLLRSSVELAKDWRMDKYL-RNLEAMILIADKTITLVITGMGD 126
+ Y P L LA R Y L A + +K + +G
Sbjct: 69 FRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIGC 128
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
V P + V A+G+G Y L +E+
Sbjct: 129 VSAPRDFV-AVGTGQEYLLGVCENFWRENMKPDEL 162
>gi|156084624|ref|XP_001609795.1| proteasome A-type and B-type family protein [Babesia bovis]
gi|154797047|gb|EDO06227.1| proteasome A-type and B-type family protein [Babesia bovis]
Length = 217
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T++ + VIA D ++S+G + N K+++L + +I G +G AD L LE
Sbjct: 16 TVVAAVWNNCAVIAADTRLSIGYAIHTRNVSKLKKLTQTCVI-GTSGMQADMHALHSALE 74
Query: 77 KKLEQY 82
+++E Y
Sbjct: 75 RQIELY 80
>gi|195383886|ref|XP_002050656.1| GJ20086 [Drosophila virilis]
gi|194145453|gb|EDW61849.1| GJ20086 [Drosophila virilis]
Length = 222
Score = 35.8 bits (81), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G V K+ ++ + NI +GS+AD + +
Sbjct: 15 GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTQISE-NIYCCRSGSAADTQAIADI 73
Query: 75 LEKKLEQYPNQLLRSSV--ELAKDWR--MDKYLRNLEAMILIA----DKTITLVITGMGD 126
+ L + NQ + + E A ++R Y +L A I++A ++ + +G
Sbjct: 74 VAYSLNYHRNQTNKEPLVCEAASEFRNYCYNYRDSLLAGIIVAGWDEERGGQVYSVPLGG 133
Query: 127 VLEPENGVMAIGSGGSY 143
+L E G GSG SY
Sbjct: 134 MLTRE-GCTIGGSGSSY 149
>gi|126309799|ref|XP_001377269.1| PREDICTED: similar to LMP2 [Monodelphis domestica]
Length = 306
Score = 35.8 bits (81), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL--- 71
TTI+ V DG VV+ D +VS G V+ K+ L + I +GS+ADA +
Sbjct: 107 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFNKLAPLNQ-QIYCALSGSAADAQAIADM 165
Query: 72 ----LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMG 125
LE +LE+ P L+ S+ + ++ KY L A +++A D+ + + G
Sbjct: 166 ATYQLELHGMELEEPP--LVLSAANVVRNISY-KYREELSAHLMVAGWDRYLGGQVYGTL 222
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
+ + GSG +Y A S EE
Sbjct: 223 EGMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEEC 258
>gi|288917497|ref|ZP_06411862.1| 20S proteasome A and B subunits [Frankia sp. EUN1f]
gi|288351043|gb|EFC85255.1| 20S proteasome A and B subunits [Frankia sp. EUN1f]
Length = 273
Score = 35.8 bits (81), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + + G + + + KV + + + G+AG++ L+
Sbjct: 50 HGTTIVAVTFPGGVIMAGDRRATQGHMIAQRDVEKVHHADEFSCV-GYAGTAGVGAELIR 108
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 109 LFQVELEHY 117
>gi|170583083|ref|XP_001896421.1| proteasome subunit beta type 3 [Brugia malayi]
gi|158596348|gb|EDP34705.1| proteasome subunit beta type 3, putative [Brugia malayi]
Length = 205
Score = 35.8 bits (81), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 13/156 (8%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
TIL + + V IA D ++ T + N +KV +LG+ + G G +DA T+L+++
Sbjct: 10 TILAMAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGE-KVYIGLGGFHSDAKTVLDKIT 68
Query: 77 KKLEQY---PNQLLRSSV------ELAKDWRMDKYLRN--LEAMILIADKTITLVITGMG 125
+ Y N+ ++ V L R Y + + +K + +G
Sbjct: 69 FRKNLYELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPYICAMDTIG 128
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
+ P N +A+G+G Y L + +E+
Sbjct: 129 CISAP-NDFVAVGTGTEYLLGVCEGFWKEGMNPDEL 163
>gi|158316642|ref|YP_001509150.1| 20S proteasome A and B subunits [Frankia sp. EAN1pec]
gi|302595824|sp|A8LH54|PSB_FRASN RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|158112047|gb|ABW14244.1| 20S proteasome A and B subunits [Frankia sp. EAN1pec]
Length = 274
Score = 35.8 bits (81), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + + G + + + KV + + + G+AG++ L+
Sbjct: 51 HGTTIVAVAFPGGVIMAGDRRATQGHMIAQRDVEKVHHADEFSCV-GYAGTAGVGAELIR 109
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 110 LFQVELEHY 118
>gi|254567792|ref|XP_002491006.1| Endopeptidase with trypsin-like activity that cleaves after basic
residues [Pichia pastoris GS115]
gi|238030803|emb|CAY68726.1| Endopeptidase with trypsin-like activity that cleaves after basic
residues [Pichia pastoris GS115]
gi|328352462|emb|CCA38861.1| 20S proteasome subunit beta 2 [Pichia pastoris CBS 7435]
Length = 265
Score = 35.8 bits (81), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V+ +G VVIA D + + G V N K+ RL AG AG++AD + + +
Sbjct: 30 TTIVGVKFEGGVVIAADTRATSGPIVADKNCEKLHRLSPTIWCAG-AGTAADTEMVTQLI 88
Query: 76 EKKLE 80
LE
Sbjct: 89 GSNLE 93
>gi|295839802|ref|ZP_06826735.1| proteasome, beta subunit [Streptomyces sp. SPB74]
gi|197697742|gb|EDY44675.1| proteasome, beta subunit [Streptomyces sp. SPB74]
Length = 280
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL + DG V++AGD + ++G + + + KV + + + G AG++ A +++
Sbjct: 51 HGTTILALAFDGGVILAGDRRATMGNVIAQRDVEKVFPADEYSAV-GIAGTAGLAVEMVK 109
Query: 74 RLEKKLEQY 82
+ +LE +
Sbjct: 110 LFQLELEHF 118
>gi|302595918|sp|A4X744|PSB2_SALTO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PrcB 2; Flags: Precursor
Length = 279
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G VV+AGD + ++G + + + KV +++ G AG++ L
Sbjct: 52 HATTIVAIATAGGVVLAGDRRATMGNLIAQRDVEKVHPADAYSLV-GMAGAAGIGIELTR 110
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 111 LFQVELEHY 119
>gi|303391190|ref|XP_003073825.1| proteasome subunit beta type-6 [Encephalitozoon intestinalis ATCC
50506]
gi|303302973|gb|ADM12465.1| proteasome subunit beta type-6 [Encephalitozoon intestinalis ATCC
50506]
Length = 202
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+M TTI+ ++ D V+I D + S+G + K+ + NI +GSSAD +
Sbjct: 6 EMTGTTIIAIKYDDGVLIGADSRTSMGAYIPSRVTDKLTPI-TNNIFVCRSGSSADTQMI 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAK 95
E L+ L Y + L SS+ L +
Sbjct: 65 SEYLKMYLTLYSH--LESSIPLVQ 86
>gi|297530025|ref|YP_003671300.1| DNA topoisomerase III [Geobacillus sp. C56-T3]
gi|297253277|gb|ADI26723.1| DNA topoisomerase III [Geobacillus sp. C56-T3]
Length = 718
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 37 LGQTVMKANARKVRRLGKGNIIAGF--AGSSADAFTLLERLEKKLE-QYPNQ 85
LG+++ AN +K+ GK N+I GF G + DA + + EKKL Q+P +
Sbjct: 667 LGKSISAANVKKLLAQGKTNVIKGFKKGGKTFDAILVWDENEKKLSFQFPKR 718
>gi|325676828|ref|ZP_08156501.1| proteasome, beta subunit [Rhodococcus equi ATCC 33707]
gi|325552376|gb|EGD22065.1| proteasome, beta subunit [Rhodococcus equi ATCC 33707]
Length = 284
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 28/185 (15%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
V H TTI+ + G VVIAGD + ++G + + KV + AG AG++ A
Sbjct: 51 VAPHGTTIVALTFAGGVVIAGDRRATMGNLIASRDVEKV-FVTDDYSAAGIAGTAGVAIE 109
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG---DV 127
L+ +LE Y V+L D + ++ + + A + + +V +G D
Sbjct: 110 LVRLFAVELEHYEKI---EGVQLTFDGKANRLSSMVRGNLGAAMQGLAVVPLLVGFDLDA 166
Query: 128 LEPEN------------------GVMAIGSGGSYALSAARALM---STQNSAEEIARKAM 166
+PE G A+GSG +A S+ + L + ++SA +A +A+
Sbjct: 167 PDPERAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSSLKKLYREGADEDSALRMAIEAL 226
Query: 167 SIAAD 171
AAD
Sbjct: 227 YDAAD 231
>gi|312139722|ref|YP_004007058.1| 20S proteasome beta subunit prcb [Rhodococcus equi 103S]
gi|311889061|emb|CBH48374.1| putative 20S proteasome beta subunit PrcB [Rhodococcus equi 103S]
Length = 284
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 28/185 (15%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
V H TTI+ + G VVIAGD + ++G + + KV + AG AG++ A
Sbjct: 51 VAPHGTTIVALTFAGGVVIAGDRRATMGNLIASRDVEKV-FVTDDYSAAGIAGTAGVAIE 109
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG---DV 127
L+ +LE Y V+L D + ++ + + A + + +V +G D
Sbjct: 110 LVRLFAVELEHYEKI---EGVQLTFDGKANRLSSMVRGNLGAAMQGLAVVPLLVGFDLDA 166
Query: 128 LEPEN------------------GVMAIGSGGSYALSAARALM---STQNSAEEIARKAM 166
+PE G A+GSG +A S+ + L + ++SA +A +A+
Sbjct: 167 PDPERAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSSLKKLYREGADEDSALRMAIEAL 226
Query: 167 SIAAD 171
AAD
Sbjct: 227 YDAAD 231
>gi|170089877|ref|XP_001876161.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164649421|gb|EDR13663.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 249
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 13/143 (9%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
TIL + VIAGD + S G ++ A KV RL ++A GFA AD +++
Sbjct: 19 TILAIAGADFSVIAGDTRQSEGYSIQTRYAPKVFRLTDKAVLAVNGFA---ADGNMFVKK 75
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG- 133
+ ++LE Y + +KD + R ++ M+ V +G + E G
Sbjct: 76 VRQRLEWYRH-------AHSKDMPIRAIARLIQTMLYARRFFPYYVYNILGGIEEDGTGA 128
Query: 134 VMAIGSGGSYALSAARALMSTQN 156
V + GSY A RA + Q+
Sbjct: 129 VYSFDPVGSYEREACRAAGAAQS 151
>gi|333028209|ref|ZP_08456273.1| putative 20S proteasome beta-subunit [Streptomyces sp. Tu6071]
gi|332748061|gb|EGJ78502.1| putative 20S proteasome beta-subunit [Streptomyces sp. Tu6071]
Length = 280
Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL + DG V++AGD + ++G + + + KV + + + G AG++ A +++
Sbjct: 51 HGTTILALAFDGGVILAGDRRATMGNVIAQRDVEKVFPADEYSAV-GIAGTAGLAVEMVK 109
Query: 74 RLEKKLEQY 82
+ +LE +
Sbjct: 110 LFQLELEHF 118
>gi|297661241|ref|XP_002809172.1| PREDICTED: proteasome subunit beta type-9-like [Pongo abelii]
Length = 218
Score = 35.4 bits (80), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
GD A TTI+ V DG VV+ D +VS G+ V+ K+ L + I +GS
Sbjct: 9 GDLPRAEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHQ-RIYCALSGS 67
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA 113
+ADA + + +LE + +L + LA + KY +L A +++A
Sbjct: 68 AADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVA 120
>gi|302518112|ref|ZP_07270454.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces sp. SPB78]
gi|318059100|ref|ZP_07977823.1| proteasome subunit beta [Streptomyces sp. SA3_actG]
gi|318077875|ref|ZP_07985207.1| proteasome subunit beta [Streptomyces sp. SA3_actF]
gi|302427007|gb|EFK98822.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces sp. SPB78]
Length = 280
Score = 35.4 bits (80), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL + DG V++AGD + ++G + + + KV + + + G AG++ A +++
Sbjct: 51 HGTTILALAFDGGVILAGDRRATMGNVIAQRDVEKVFPADEYSAV-GIAGTAGLAVEMVK 109
Query: 74 RLEKKLEQY 82
+ +LE +
Sbjct: 110 LFQLELEHF 118
>gi|282879628|ref|ZP_06288359.1| 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
[Prevotella timonensis CRIS 5C-B1]
gi|281306576|gb|EFA98605.1| 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
[Prevotella timonensis CRIS 5C-B1]
Length = 279
Score = 35.4 bits (80), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Query: 59 AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
AG G S+DA +L+ L EQ+ S+ L D ++ Y L A K+
Sbjct: 100 AGLGGGSSDAAYMLKLLN---EQF-------SLNLTVD-KLKDYAARLGADCAFFIKSEP 148
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
+G+GDVLEP + + G AL +STQ + ++I K S++
Sbjct: 149 CFASGIGDVLEPISNSSYLLKGYKLALIKPDIAISTQRAYQQIKVKKPSVSC 200
>gi|269126673|ref|YP_003300043.1| 20S proteasome subunits A and B [Thermomonospora curvata DSM 43183]
gi|302595729|sp|D1A3V2|PSB2_THECD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PrcB 2; Flags: Precursor
gi|268311631|gb|ACY98005.1| 20S proteasome A and B subunits [Thermomonospora curvata DSM 43183]
Length = 280
Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ VR V++AGD + + G + + + KV R + + +A AG+ A ++
Sbjct: 51 HGTTIVAVRYPEGVMLAGDRRATSGNLIAQKDLEKVHRADEHSAVA-MAGTVGLALEMIR 109
Query: 74 RLEKKLEQY 82
L+ +LE Y
Sbjct: 110 LLQVELEHY 118
>gi|195170326|ref|XP_002025964.1| GL10209 [Drosophila persimilis]
gi|194110828|gb|EDW32871.1| GL10209 [Drosophila persimilis]
Length = 225
Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G V K+ R+ I +GS+AD + +
Sbjct: 15 GTTIMAVEFDGGVVIGADSRTSSGPYVANRVTDKLTRI-TDKIYCCRSGSAADTQAIADI 73
Query: 75 LEKKLEQYPNQLLRSSV--ELAKDWR--MDKYLRNLEAMILIA----DKTITLVITGMGD 126
+ L + NQ + ++ E A ++R Y +L A I++A + + +G
Sbjct: 74 VAYSLNYHENQTSKDALVFEAASEFRNYCYNYRDSLLAGIIVAGWDEQRGGQVFSIPLGG 133
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
+L E + GSG S+ R S EE +
Sbjct: 134 MLTREPCTIG-GSGSSFIYGYVREHFHEGMSKEECVK 169
>gi|156365620|ref|XP_001626742.1| predicted protein [Nematostella vectensis]
gi|156213630|gb|EDO34642.1| predicted protein [Nematostella vectensis]
Length = 229
Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T+L + + VIA D ++S G + ++ KV +L G+ + G +G D TL + +
Sbjct: 27 TVLAISGEDFAVIASDTRLSQGFQIHTRDSPKVYKL-TGSTVLGCSGFHGDCLTLTKHIS 85
Query: 77 KKLEQY 82
+L+ Y
Sbjct: 86 ARLQMY 91
>gi|50302329|ref|XP_451099.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640230|emb|CAH02687.1| KLLA0A02233p [Kluyveromyces lactis]
Length = 262
Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 29/183 (15%)
Query: 8 HYAVKMH--------ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA 59
H A K H TTI+ V+ +G V+IA D + + G V N K+ R+ A
Sbjct: 15 HLAEKSHKQPNATSTGTTIVGVKFNGGVIIAADTRSTQGPIVADKNCEKLHRIAPRIWCA 74
Query: 60 GFAGSSADAFTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA- 113
G AG++AD + + + +E + R SS+++ K + KY ++ A +++A
Sbjct: 75 G-AGTAADTEAVTQLISSNIELHSLYTGREPRVVSSLQMLKQ-HLFKYQGHIGAYLIVAG 132
Query: 114 -DKT----ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
D T ++ G DV ++GSG A++ A + S EE A+ +
Sbjct: 133 VDPTGAHLFSIHAHGSTDV----GYYQSLGSGSLAAMAVLEANWNQDLSKEE----AIKL 184
Query: 169 AAD 171
A+D
Sbjct: 185 ASD 187
>gi|320583811|gb|EFW98024.1| proteasome component Pup1, putative [Pichia angusta DL-1]
Length = 267
Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ + + VVIA D + + G V N K+ RL AG AG++AD + + +
Sbjct: 30 TTIVGCKFNDGVVIAADTRATAGPIVADKNCEKLHRLAPRIWCAG-AGTAADTEMVTQLV 88
Query: 76 EKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA 113
+ LE + L R S++++ K + KY ++ A +++A
Sbjct: 89 QSNLELHSMSLNREPRVSSALQMLKQ-HLFKYQGHIGAYLIVA 130
>gi|198460983|ref|XP_001361869.2| GA21041 [Drosophila pseudoobscura pseudoobscura]
gi|198137197|gb|EAL26448.2| GA21041 [Drosophila pseudoobscura pseudoobscura]
Length = 225
Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G V K+ R+ I +GS+AD + +
Sbjct: 15 GTTIMAVEFDGGVVIGADSRTSSGPYVANRVTDKLTRI-TDKIYCCRSGSAADTQAIADI 73
Query: 75 LEKKLEQYPNQLLRSSV--ELAKDWR--MDKYLRNLEAMILIA----DKTITLVITGMGD 126
+ L + NQ + ++ E A ++R Y +L A I++A + + +G
Sbjct: 74 VAYSLNYHENQTSKDALVFEAASEFRNYCYNYRDSLLAGIIVAGWDEQRGGQVFSIPLGG 133
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
+L E + GSG S+ R S EE +
Sbjct: 134 MLTREPCTIG-GSGSSFIYGYVREHFHEGMSKEECVK 169
>gi|237833495|ref|XP_002366045.1| proteasome component PRE3 precursor, putative [Toxoplasma gondii
ME49]
gi|211963709|gb|EEA98904.1| proteasome component PRE3 precursor, putative [Toxoplasma gondii
ME49]
gi|221486248|gb|EEE24509.1| proteasome component PRE3 precursor / proteasome subunit beta type
6 precursor, putative [Toxoplasma gondii GT1]
Length = 245
Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V G VV+ D + S G V+ ARK+ R+ + I +GS+AD + + +
Sbjct: 46 TTIVAVSFKGGVVLGADTRTSAGSYVVNRAARKISRVHE-RICVCRSGSAADTQAVTQIV 104
Query: 76 EKKLEQYPNQLLR 88
+ ++QY +L +
Sbjct: 105 KLYIQQYAQELPK 117
>gi|220912674|ref|YP_002487983.1| 20S proteasome A and subunit betas [Arthrobacter chlorophenolicus
A6]
gi|302595819|sp|B8H8L6|PSB_ARTCA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|219859552|gb|ACL39894.1| 20S proteasome A and B subunits [Arthrobacter chlorophenolicus A6]
Length = 273
Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 37/184 (20%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAGFAGSSADAFTL 71
HATTI+ + +G V++AGD + ++G + + KV + ++ IAG AG + D L
Sbjct: 49 HATTIVAMSYNGGVLMAGDRRATMGNVIASRHIEKVFPADRYSVLGIAGTAGIAIDLTRL 108
Query: 72 ----LERLEK------KLEQYPNQL---LRSSVELAKDWRMDKYLRNLEAMILIAD---- 114
LE EK LE N+L +R ++ LA ++ L + L A
Sbjct: 109 FQVELEHYEKIEGTLLSLEGKANRLGAMIRGNLPLA--------MQGLAVVPLFAGFDTS 160
Query: 115 ----KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
+ + +TG G E E+ +GSG +A A + L SAEE +A +A+
Sbjct: 161 AGVGRLFSYDVTG-GRYEEHEH--HTVGSGSVFARGALKKLWRPNLSAEEAVAVAIEALF 217
Query: 168 IAAD 171
AAD
Sbjct: 218 DAAD 221
>gi|261420014|ref|YP_003253696.1| DNA topoisomerase III [Geobacillus sp. Y412MC61]
gi|319766829|ref|YP_004132330.1| DNA topoisomerase III [Geobacillus sp. Y412MC52]
gi|261376471|gb|ACX79214.1| DNA topoisomerase III [Geobacillus sp. Y412MC61]
gi|317111695|gb|ADU94187.1| DNA topoisomerase III [Geobacillus sp. Y412MC52]
Length = 718
Score = 35.4 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 37 LGQTVMKANARKVRRLGKGNIIAGF--AGSSADAFTLLERLEKKLE-QYP 83
LG+++ AN +K+ GK N+I GF G + DA + + EKKL Q+P
Sbjct: 667 LGKSISAANVKKLLAQGKTNVIKGFKKGGKTFDAILVWDENEKKLSFQFP 716
>gi|149238379|ref|XP_001525066.1| proteasome component C11 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451663|gb|EDK45919.1| proteasome component C11 [Lodderomyces elongisporus NRRL YB-4239]
Length = 197
Score = 35.4 bits (80), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
IL +R + ++A + G +V+K N K R L N+IA F G S D E +
Sbjct: 4 ILGIRLEDATLVATSKAATRGISVLKDNDDKTRHLNAHNLIA-FTGESGDTIQFSEYAQA 62
Query: 78 KLEQYPNQLLRSSVELAKDWRMDKYLRNLEA 108
++ Y + VEL+ Y+RNL A
Sbjct: 63 NIQLY--SMREDEVELSPKATA-SYVRNLLA 90
>gi|162606150|ref|XP_001713590.1| 26S proteasome SU B5 [Guillardia theta]
gi|13794510|gb|AAK39885.1|AF165818_93 26S proteasome SU B5 [Guillardia theta]
Length = 205
Score = 35.4 bits (80), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL- 71
+H TT L G ++++ D + S+G V + RK+ + N++ AG +AD F
Sbjct: 9 LHGTTTLAFIFRGGIIVSVDSRASMGSYVGSSKVRKILEISN-NLLGTMAGGAADCFFWE 67
Query: 72 --LERLEKKLEQYPNQLL 87
L L K E NQ L
Sbjct: 68 RNLSSLCKIFEIRNNQKL 85
>gi|302692828|ref|XP_003036093.1| hypothetical protein SCHCODRAFT_81440 [Schizophyllum commune H4-8]
gi|300109789|gb|EFJ01191.1| hypothetical protein SCHCODRAFT_81440 [Schizophyllum commune H4-8]
Length = 310
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 23/173 (13%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA--FTL 71
H TT L R G V++A D + + G V +KV + ++ AG +AD +
Sbjct: 82 HGTTTLAFRFQGGVIVAVDSRATAGSYVASGTVKKVIEINP-YLLGTMAGGAADCQYWET 140
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKTITLV 120
+ +L + N+ R SV A KYL NL MI DKT +
Sbjct: 141 YLGMHCRLHELRNR-ERISVSAAS-----KYLSNLVYSYKGMGLSMGTMICGWDKTGPQI 194
Query: 121 ITGMGDVLEPENGVMAIGSGGSYA---LSAARALMSTQNSAEEIARKAMSIAA 170
D + + ++GSG ++A L T A+E+ R+++ A
Sbjct: 195 FYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWDLTDAEAQELGRRSIYAAG 247
>gi|221508035|gb|EEE33622.1| proteasome component PRE3 precursor / proteasome subunit beta type
6 precursor, putative [Toxoplasma gondii VEG]
Length = 245
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V G VV+ D + S G V+ ARK+ R+ + I +GS+AD + + +
Sbjct: 46 TTIVAVSFKGGVVLGADTRTSAGSYVVNRAARKISRVHE-RICVCRSGSAADTQAVTQIV 104
Query: 76 EKKLEQYPNQLLR 88
+ ++QY +L +
Sbjct: 105 KLYIQQYAQELPK 117
>gi|114606765|ref|XP_001167429.1| PREDICTED: proteasome subunit beta type-9 isoform 3 [Pan
troglodytes]
gi|332823722|ref|XP_003311253.1| PREDICTED: proteasome subunit beta type-9 [Pan troglodytes]
Length = 218
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
GD A TTI+ V DG VV+ D +VS G+ V+ K+ L + I +GS
Sbjct: 9 GDLPRAEVHTGTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHE-RIYCALSGS 67
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA 113
+ADA + + +LE + +L + LA + KY +L A +++A
Sbjct: 68 AADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVA 120
>gi|308198291|ref|XP_001386964.2| 20S proteasome, regulatory subunit beta type PSMB7/PSMB10/PUP1
[Scheffersomyces stipitis CBS 6054]
gi|149388951|gb|EAZ62941.2| 20S proteasome, regulatory subunit beta type PSMB7/PSMB10/PUP1
[Pichia stipitis CBS 6054]
Length = 267
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ + G VVIA D + + G V N K+ RL AG AG++AD + + +
Sbjct: 30 TTIVGCKFKGGVVIAADTRATAGSIVADKNCEKLHRLAPKIWCAG-AGTAADTEMVTQLI 88
Query: 76 EKKLE---QYPNQLLR--SSVELAKDWRMDKYLRNLEAMILIA 113
LE Y N+ R +++ + K + KY +L A +++A
Sbjct: 89 ASNLELHGLYQNRQPRVITALTMLKQ-HLFKYQGHLGAYLIVA 130
>gi|111222291|ref|YP_713085.1| 20S proteasome subunit beta [Frankia alni ACN14a]
gi|111149823|emb|CAJ61517.1| 20S proteasome beta-subunit [Frankia alni ACN14a]
Length = 259
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + + G + + + KV + + G+AG++ L+
Sbjct: 36 HGTTIVAVTFPGGVIMAGDRRATQGHMIAQRDVEKVHHADDFSCV-GYAGTAGVGAELIR 94
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 95 LFQVELEHY 103
>gi|302595911|sp|Q0RLT7|PSB_FRAAA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|6492303|gb|AAF14267.1|AF142435_3 20S proteasome beta-subunit precursor [Frankia sp. ACN14a/ts-r]
Length = 274
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + + G + + + KV + + G+AG++ L+
Sbjct: 51 HGTTIVAVTFPGGVIMAGDRRATQGHMIAQRDVEKVHHADDFSCV-GYAGTAGVGAELIR 109
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 110 LFQVELEHY 118
>gi|327289327|ref|XP_003229376.1| PREDICTED: proteasome subunit beta type-11-like [Anolis
carolinensis]
Length = 372
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
H TT L R VV+A D + S G + ++RKV L + +++A +G+SAD T
Sbjct: 82 HGTTTLAFRCSHGVVVAADTRSSCGSLISDPSSRKVITLHR-HLLATTSGTSADCATW 138
>gi|299752963|ref|XP_002911819.1| proteasome component pts1 [Coprinopsis cinerea okayama7#130]
gi|298410081|gb|EFI28325.1| proteasome component pts1 [Coprinopsis cinerea okayama7#130]
Length = 313
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 23/189 (12%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA--FTL 71
H TT L R G V++A D + + G + +KV + ++ AG +AD +
Sbjct: 82 HGTTTLAFRFQGGVIVAVDSRATAGSYIASGTVKKVIEINP-YLLGTMAGGAADCQYWET 140
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKTITLV 120
+ +L + N+ R SV A K+L NL MI DKT +
Sbjct: 141 YLGMHCRLHELRNK-ERISVSAAS-----KFLSNLVYSYKGMGLSMGTMICGWDKTGPAI 194
Query: 121 ITGMGDVLEPENGVMAIGSGGSYA---LSAARALMSTQNSAEEIARKAMSIAADICVYTN 177
D + + ++GSG ++A L T A+E+ R+++ A ++
Sbjct: 195 FYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWDLTDAEAQELGRRSIYAAGHRDAFSG 254
Query: 178 HNIVLETLK 186
+++ L +K
Sbjct: 255 NSVNLYHVK 263
>gi|198456605|ref|XP_001360388.2| GA22086 [Drosophila pseudoobscura pseudoobscura]
gi|198135674|gb|EAL24963.2| GA22086 [Drosophila pseudoobscura pseudoobscura]
Length = 321
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 26/181 (14%)
Query: 8 HYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
H VKM H TT L R G VV+ D + + GQ + +K+ L ++ AG
Sbjct: 61 HCGVKMDFAHGTTTLGFRYQGGVVLCADSRATSGQYIGSQTMKKIVELND-YMLGTLAGG 119
Query: 65 SADAFTLLERLEKKLEQYPNQLLRS-SVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
+AD L + + + R SV+ A RM + N+ A + +++ G
Sbjct: 120 AADCVYWDRVLARDSRLHELRFKRRLSVDAAA--RM---IVNISAEYKGMGLVMGMMLAG 174
Query: 124 MGDV-----------LEPENGVMAIGSGGSYAL----SAARALMSTQNSAEEIARKAMSI 168
D + V A+GSG YAL + R M+ Q A ++AR+A+
Sbjct: 175 YDDEGPKLIYVDSEGMRCHGNVFAVGSGSPYALGVLDTGHRFTMTDQ-EAFDLARRAIYH 233
Query: 169 A 169
A
Sbjct: 234 A 234
>gi|86741318|ref|YP_481718.1| proteasome subunit beta [Frankia sp. CcI3]
gi|86568180|gb|ABD11989.1| proteasome endopeptidase complex, beta component. Threonine
peptidase. MEROPS family T01B [Frankia sp. CcI3]
Length = 304
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + + G + + + KV + + G+AG++ L+
Sbjct: 81 HGTTIVAVAFPGGVIMAGDRRATQGHMIAQRDVEKVHHADDYSCV-GYAGTAGVGAELIR 139
Query: 74 RLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLRNLEAMILIADKTITLVI-----TGMGDV 127
+ +LE Y ++ S++ L AK R+ ++ M L + L TG G +
Sbjct: 140 LFQVELEHY-EKIEGSTLSLDAKANRLAAMVKGNLPMALQGLAVVPLFAGYDLDTGKGRI 198
Query: 128 L--------EPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAAD 171
E +IGSG +A + + +Q+ A I+ +A+ AAD
Sbjct: 199 FSYDIAAAKSEERTYESIGSGSVFAKGSLKKRFRSDLSQDDAVRISVEALYDAAD 253
>gi|195568346|ref|XP_002102177.1| GD19639 [Drosophila simulans]
gi|194198104|gb|EDX11680.1| GD19639 [Drosophila simulans]
Length = 322
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 22/112 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE- 73
TT++ + DG V+I + + ++G ++ RK+ L + NI A AG++ D L+E
Sbjct: 49 GTTVVGIVFDGGVIIGAESKAAIGSMILSKTIRKIVEL-QSNIFAAGAGTARDTKALVEL 107
Query: 74 --------RLEKKLEQYP----NQLLRSSVELAKDWRMDKYLRNLEAMILIA 113
R+ + P NQ++R + +Y RN++A ++I
Sbjct: 108 TRAQLELHRMNTGFRKVPVCCANQMIRQ--------LLFRYNRNIDADMIIG 151
>gi|195343577|ref|XP_002038372.1| GM10658 [Drosophila sechellia]
gi|194133393|gb|EDW54909.1| GM10658 [Drosophila sechellia]
Length = 322
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE-- 73
TT++ + DG V+I + + ++G ++ RK+ L + NI A AG++ D L+E
Sbjct: 50 TTVVGIVFDGGVIIGAESKAAMGSMILSKTIRKIVEL-QSNIFAAGAGTARDTKALVELT 108
Query: 74 -------RLEKKLEQYP----NQLLRSSVELAKDWRMDKYLRNLEAMILI 112
R+ + P NQ++R + +Y RN++A ++I
Sbjct: 109 RAQLELHRMNTGFRKVPVCCANQMIRQ--------LLFRYNRNIDADMII 150
>gi|118617841|ref|YP_906173.1| proteasome (beta subunit) PrcB [Mycobacterium ulcerans Agy99]
gi|183983084|ref|YP_001851375.1| proteasome (beta subunit) PrcB [Mycobacterium marinum M]
gi|302595767|sp|B2HFV6|PSB_MYCMM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|302595774|sp|A0PQT3|PSB_MYCUA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|118569951|gb|ABL04702.1| proteasome (beta subunit) PrcB [Mycobacterium ulcerans Agy99]
gi|183176410|gb|ACC41520.1| proteasome (beta subunit) PrcB [Mycobacterium marinum M]
Length = 289
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 22/179 (12%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA--FTL 71
HATTI+ ++ G V+IAGD + + G + + RKV + G AG++A A F
Sbjct: 54 HATTIVALKYPGGVLIAGDRRSTQGNMIAGRDVRKVY-ITDDYTATGIAGTAAIAVEFAR 112
Query: 72 LERLE----KKLEQYPNQLLRSSVELAKDWR--MDKYLRNLEAMILIADKTI-------- 117
L +E +KLE P LA R + ++ L A+ L+A I
Sbjct: 113 LYAVELEHYEKLEGVPLTFAGKVNRLAIMVRGNLAAAMQGLVALPLLASYDIHASDPRSA 172
Query: 118 --TLVITGMGDVLEPENGVMAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAAD 171
+ G E G A+GSG +A S+ + L ++ +SA +A +A+ AAD
Sbjct: 173 GRIVSFDAAGGWNIEEEGYQAVGSGSIFAKSSIKKLYAQVTDADSALRVAVEALYDAAD 231
>gi|302595912|sp|Q2J9Q3|PSB_FRASC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
Length = 274
Score = 35.0 bits (79), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + + G + + + KV + + G+AG++ L+
Sbjct: 51 HGTTIVAVAFPGGVIMAGDRRATQGHMIAQRDVEKVHHADDYSCV-GYAGTAGVGAELIR 109
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 110 LFQVELEHY 118
>gi|296129845|ref|YP_003637095.1| 20S proteasome A and B subunits [Cellulomonas flavigena DSM 20109]
gi|296021660|gb|ADG74896.1| 20S proteasome A and B subunits [Cellulomonas flavigena DSM 20109]
Length = 276
Score = 35.0 bits (79), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + +G VV+AGD + ++G + + KV + + + G AG++ A L+
Sbjct: 49 HATTIVALAFEGGVVMAGDRRATMGSMIASRHIEKVFPADEFSAV-GIAGTAGLAIELVR 107
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 108 LFQLELEHY 116
>gi|312197566|ref|YP_004017627.1| 20S proteasome A and B subunits [Frankia sp. EuI1c]
gi|311228902|gb|ADP81757.1| 20S proteasome A and B subunits [Frankia sp. EuI1c]
Length = 274
Score = 35.0 bits (79), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + + G + + KV + + + G+AG++ L++
Sbjct: 51 HGTTIVAVTFPGGVIMAGDRRATQGNLIATRDVDKVHHADEYSAV-GYAGTAGVGADLIK 109
Query: 74 RLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLRNLEAMILIADKTITLVI-----TGMGDV 127
+ +LE Y ++ ++ L AK R+ +++ M L + L G+G +
Sbjct: 110 LFQVELEHY-EKIEGDTLSLDAKANRLGFMVKSNLPMALQGLAVVPLFAGYDLDRGVGRI 168
Query: 128 L--------EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
E G +IGSG +A SA + S E R
Sbjct: 169 FSYDIAAARSEEQGFHSIGSGSVFAKSALKKTWRADLSEEHAVR 212
>gi|229493495|ref|ZP_04387280.1| proteasome, beta subunit [Rhodococcus erythropolis SK121]
gi|229319456|gb|EEN85292.1| proteasome, beta subunit [Rhodococcus erythropolis SK121]
Length = 277
Score = 35.0 bits (79), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G V++AGD + ++G + + +KV + AG AG++ A L+
Sbjct: 43 HGTTIVAISYAGGVLLAGDRRATMGNLIASRDVQKV-YVTDDYSAAGIAGTAGIAIELVR 101
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG---DVLEP 130
+LE Y V L D + ++ + + A + + +V +G D ++P
Sbjct: 102 LFAVELEHYEKI---EGVPLTFDGKANRLSSMVRGNLGAAMQGLAVVPLLVGYDLDAVDP 158
Query: 131 EN------------------GVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIA 169
G A+GSG +A SA + L S +++A A +A+ A
Sbjct: 159 STAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKLYSPGIDEDTALRFAVEALYDA 218
Query: 170 AD 171
AD
Sbjct: 219 AD 220
>gi|323456588|gb|EGB12455.1| hypothetical protein AURANDRAFT_20025 [Aureococcus anophagefferens]
Length = 197
Score = 35.0 bits (79), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 14/167 (8%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAGFAGSSADAFTL 71
H TT + R DG + D + SLG V + K + + + +AG AG L
Sbjct: 3 HGTTTVAFRFDGGTMCCVDSRASLGNFVGSYSTEKAIPVSRTTLGTMAGSAGDCTYWLRL 62
Query: 72 LERLEKKLE---QYPNQLLRSSVELAKDW-RMDKYLRNLEAMILIADKTITLVITGMGDV 127
L K E +P R++ LA R DK L ++ D T+T G
Sbjct: 63 LSATSKLAELETGFPPSARRNAEYLAGLLSRQDKNLDLSVGTMMFDDATLTYA-DNSGAC 121
Query: 128 LEPENGVMAIGSGGSYALS----AARALMSTQNSAEEIARKAMSIAA 170
L + A+GSG YA S RA ++ +A ++A KA+ AA
Sbjct: 122 LAGH--LFAVGSGSPYAYSVLDAGYRADLNVDEAA-DLAEKAVRTAA 165
>gi|269126545|ref|YP_003299915.1| 20S proteasome subunits A and B [Thermomonospora curvata DSM 43183]
gi|302595699|sp|D1A2S9|PSB1_THECD RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PrcB 1; Flags: Precursor
gi|268311503|gb|ACY97877.1| 20S proteasome A and B subunits [Thermomonospora curvata DSM 43183]
Length = 284
Score = 35.0 bits (79), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ V G VV+AGD + + G + + + KV R + + +A AG++ ++
Sbjct: 55 HATTIVAVTFPGGVVMAGDRRATAGNMIAQRDVEKVFRADEFSAVA-IAGTAGIGMEIVR 113
Query: 74 RLEKKLEQY 82
+ ++E Y
Sbjct: 114 LFQVEIEHY 122
>gi|327399781|ref|YP_004340650.1| pseudaminic acid biosynthesis-associated protein PseG [Hippea
maritima DSM 10411]
gi|327182410|gb|AEA34591.1| pseudaminic acid biosynthesis-associated protein PseG [Hippea
maritima DSM 10411]
Length = 332
Score = 35.0 bits (79), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 20/148 (13%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT-- 70
+HA + +KDGV+ + G L + + +R + +I F G A T
Sbjct: 122 IHAKELNYPKKDGVIYLLGTEYTPLRKEFWDVPEKTIREKVQSVMIT-FGGEDAKNMTPK 180
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI----TGMGD 126
+L L E YP EL K+ + K RN+E + +ADK L+ GM
Sbjct: 181 ILRLLS---ENYP--------ELKKNVVIGKGFRNIEDIKAVADKNTNLIYYPDAEGMKQ 229
Query: 127 VLEPENGVMAIGSGGSYALSAARALMST 154
++ + +AI +GG AR + T
Sbjct: 230 IM--FDADIAISAGGQTLYELARVGVPT 255
>gi|145223664|ref|YP_001134342.1| 20S proteasome, A and B subunits [Mycobacterium gilvum PYR-GCK]
gi|315443990|ref|YP_004076869.1| proteasome endopeptidase complex, beta component [Mycobacterium sp.
Spyr1]
gi|302595765|sp|A4TB64|PSB_MYCGI RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|145216150|gb|ABP45554.1| proteasome endopeptidase complex, beta component. Threonine
peptidase. MEROPS family T01B [Mycobacterium gilvum
PYR-GCK]
gi|315262293|gb|ADT99034.1| proteasome endopeptidase complex, beta component [Mycobacterium sp.
Spyr1]
Length = 303
Score = 35.0 bits (79), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 30/183 (16%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL-- 71
H TTI+ ++ G VV+AGD + + G + + +KV + + G AG++A A
Sbjct: 63 HGTTIVALKFPGGVVMAGDRRATQGHMIASRDVQKVY-ITDDYTVTGIAGTAAIAVEFAR 121
Query: 72 --------LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------- 114
E+LE +P ++ R + + + + L+ A+ L+A
Sbjct: 122 LYAVELEHYEKLEGVALTFPGKVNRLATMVRGN--LGAALQGFVALPLLAGYDLDDPNPE 179
Query: 115 ---KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSI 168
+ ++ G G LE E G ++GSG +A S+ + L S +SA +A +A+
Sbjct: 180 GAGRIVSFDAAG-GHNLE-EEGYQSVGSGSIFAKSSMKKLYSQVTDADSALRVAIEALYD 237
Query: 169 AAD 171
AAD
Sbjct: 238 AAD 240
>gi|326801331|ref|YP_004319150.1| xylose isomerase [Sphingobacterium sp. 21]
gi|326552095|gb|ADZ80480.1| Xylose isomerase domain-containing protein TIM barrel
[Sphingobacterium sp. 21]
Length = 285
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 40 TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK-------KLEQYPNQLLRSSVE 92
+V+KA R +LG G S + FT E + K +E YP Q + +E
Sbjct: 22 SVLKAQDRPEEKLG---WKLGAQAYSFNRFTFAEAIAKVDSCKLKYIEAYPGQTIGGGIE 78
Query: 93 LAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
D+ M K R + + L+ DK ITLV G+ PE
Sbjct: 79 GKMDFAMSKEKR-AQVLQLLKDKGITLVAFGVVSADSPE 116
>gi|257056206|ref|YP_003134038.1| proteasome endopeptidase complex, beta component [Saccharomonospora
viridis DSM 43017]
gi|302595783|sp|C7MWV7|PSB_SACVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|256586078|gb|ACU97211.1| proteasome endopeptidase complex, beta component [Saccharomonospora
viridis DSM 43017]
Length = 289
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 29/176 (16%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ +G V+IAGD + + G T+ + KV + + G AG++ A L+
Sbjct: 58 HGTTIVASTFNGGVLIAGDRRATTGNTIASRDLEKVYVTDAYSAV-GIAGTAGIALELVR 116
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWR-----------MDKYLRNLEAMILI---------- 112
+L Y V L+ D + +D L L + L
Sbjct: 117 LYTVELAHYEKI---EGVSLSLDGKANKLANMVKGNLDGALAGLAVLPLFVGYDIDADDP 173
Query: 113 --ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
A + ++ +T G E G AIGSG YA S+ + L + A+ R A+
Sbjct: 174 KRAGRIVSFDVT--GGRYEENAGYHAIGSGAVYAKSSLKKLYDPEADADTAVRTAI 227
>gi|50293069|ref|XP_448962.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528275|emb|CAG61932.1| unnamed protein product [Candida glabrata]
Length = 261
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 21/167 (12%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V+ G VVIA D + + G V N K+ R+ AG AG++AD + + +
Sbjct: 30 TTIVGVKFAGGVVIAADTRSTQGPIVADKNCAKLHRISPRIWCAG-AGTAADTEAVTQLI 88
Query: 76 EKKLE---QYPNQLLR--SSVELAKDWRMDKYLRNLEAMILIA--DKT----ITLVITGM 124
+E Y N+ R S++++ K + KY ++ A +++A D T ++ G
Sbjct: 89 GSNIELHSLYTNRSPRVVSALQMLKQ-HLFKYQGHIGAYLIVAGVDPTGAHLFSIHAHGS 147
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
DV ++GSG AA A++ + + +A+ +AAD
Sbjct: 148 TDV----GYYQSLGSGS----LAAMAVLESHWKPDMTKEEAIQLAAD 186
>gi|294659430|ref|XP_461801.2| DEHA2G05852p [Debaryomyces hansenii CBS767]
gi|199433955|emb|CAG90262.2| DEHA2G05852p [Debaryomyces hansenii]
Length = 271
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 21/167 (12%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ + G VVIA D + + G V N K+ RL AG AG++AD + + +
Sbjct: 30 TTIVGCKFKGGVVIAADTRATAGSIVADKNCEKLHRLAPRIWCAG-AGTAADTEMVTQLI 88
Query: 76 EKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIA--DKT----ITLVITGM 124
LE + N+ R +++ L K + KY +L A +++A D T +++ G
Sbjct: 89 ASNLELHSLSQNRKPRVITALTLLKQ-HLFKYQGHLGAYLIVAGVDPTGAHLLSVQAHGS 147
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
D+ + ++GSG AA A++ T + +AM + AD
Sbjct: 148 TDIGQ----YQSLGSGS----LAAMAVLETHWRPDMSREEAMKLVAD 186
>gi|71021599|ref|XP_761030.1| hypothetical protein UM04883.1 [Ustilago maydis 521]
gi|46100884|gb|EAK86117.1| hypothetical protein UM04883.1 [Ustilago maydis 521]
Length = 451
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 23/189 (12%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA--FTL 71
H TT L R G +++ D + + G + +KV + ++ AG +AD +
Sbjct: 26 HGTTTLAFRFRGGIIVCVDSRATAGSYIASGTVKKVIEINP-YLLGTMAGGAADCQYWET 84
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKTITLV 120
++ +L + N+ R SV A KYL NL MI DKT +
Sbjct: 85 YLGIQCRLHELRNK-ERISVAAAS-----KYLSNLVYSYKGMGLSMGTMICGWDKTGPAL 138
Query: 121 ITGMGDVLEPENGVMAIGSGGSYA---LSAARALMSTQNSAEEIARKAMSIAADICVYTN 177
D + V ++GSG ++A L + A+E+ R+++ AA Y+
Sbjct: 139 FYVDSDGNRLKGDVFSVGSGSTFAYGVLDQGYKWDLSDEEAQELGRRSIYAAAHRDAYSG 198
Query: 178 HNIVLETLK 186
+ + L ++
Sbjct: 199 NTVNLYHVR 207
>gi|290986448|ref|XP_002675936.1| predicted protein [Naegleria gruberi]
gi|284089535|gb|EFC43192.1| predicted protein [Naegleria gruberi]
Length = 223
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T L + V++A D ++SLG ++ + K+ +L +IA AG +DA TL + L+
Sbjct: 21 TTLAIPGPDYVIVAADTRMSLGYSIQTRKSTKLCKLTDKCVIAS-AGMQSDAATLHKVLK 79
Query: 77 KKLEQYPNQ 85
+L +Y +Q
Sbjct: 80 MRLVEYEHQ 88
>gi|255029339|ref|ZP_05301290.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
LO28]
Length = 30
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 158 AEEIARKAMSIAADICVYTNHNIVLETL 185
A++IAR A+ IA++ICV+TN +I +E L
Sbjct: 3 AKDIARHALEIASEICVFTNDHITVEEL 30
>gi|72162191|ref|YP_289848.1| proteasome subunit beta [Thermobifida fusca YX]
gi|123629303|sp|Q47NZ4|PSB_THEFY RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|71915923|gb|AAZ55825.1| bacterial proteasome, beta component. Threonine peptidase. MEROPS
family T01B [Thermobifida fusca YX]
Length = 282
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
ATTI+ V G VV+AGD + + G + + K+ R + + + G AGS+ L +
Sbjct: 54 ATTIVAVVFSGGVVLAGDRRATSGNVIANRDMDKLFRTDEFSAV-GIAGSAGIGIELAKL 112
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI-----TGMGDVL- 128
+ +LE Y + R K R+ +R+ + + + L++ G G +
Sbjct: 113 FQVELEHYEKREGRPLSLEGKANRLATMIRSNLGLAMQGFVVVPLLVGYDTSRGEGRIFS 172
Query: 129 -EP------ENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAAD 171
+P E+ AIGSG YA A + L + A +A +A+ AAD
Sbjct: 173 YDPVGGCYEEHRYHAIGSGSVYAKGALKKLYRDDLAETDAALVALQALYDAAD 225
>gi|321260412|ref|XP_003194926.1| 20S proteasome beta-type subunit; Pre7p [Cryptococcus gattii WM276]
gi|317461398|gb|ADV23139.1| 20S proteasome beta-type subunit, putative; Pre7p [Cryptococcus
gattii WM276]
Length = 272
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
+IL + +IAGD + S G ++ ARKV +L ++A GFA AD ++R
Sbjct: 33 SILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLATNGFA---ADGNNFVKR 89
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---LIADKTITLVITG-MGDVLEP 130
++++LE Y E A + M L+++ MI L + + +G + E
Sbjct: 90 VKQRLEWY---------EHAHNKPMS--LKSIARMIQTMLYGKRFFPYYVYNILGGIEED 138
Query: 131 ENG-VMAIGSGGSYALSAARALMSTQN 156
+G V + GSY A RA + Q+
Sbjct: 139 GSGAVYSFDPVGSYEREACRAAGAAQS 165
>gi|299743502|ref|XP_001835816.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
gi|298405683|gb|EAU85881.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
Length = 253
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 13/143 (9%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
TIL V VIAGD + S G + A KV +L ++A GFA AD +++
Sbjct: 23 TILAVAGADFTVIAGDTRQSEGYNIQTRYAPKVFKLTDKAVLAVNGFA---ADGNMFVKK 79
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG- 133
++++LE Y + AKD + R ++ M+ V +G + E G
Sbjct: 80 VKQRLEWYRH-------AHAKDMPIRSIARLIQTMLYARRFFPYYVYNILGGIEEDGTGA 132
Query: 134 VMAIGSGGSYALSAARALMSTQN 156
V + GSY RA + Q+
Sbjct: 133 VYSFDPVGSYERETCRAAGAAQS 155
>gi|297560457|ref|YP_003679431.1| 20S proteasome A and subunit betas [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296844905|gb|ADH66925.1| 20S proteasome A and B subunits [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 280
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
ATTI+ + G V++AGD + + G + + KV R + + +A AGS+ L
Sbjct: 52 ATTIVALTFPGGVLLAGDRRATQGNIIANRDMEKVFRTDEYSAVA-IAGSAGFGIELARL 110
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI-----TGMGDVLE 129
+ +LE Y RS K ++ + +R + + + L++ TG G V
Sbjct: 111 YQVELEHYEKMEGRSLSLEGKANKLAQMVRGNLGLAMQGFVVVPLLVGYDENTGQGRVFS 170
Query: 130 --------PENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAAD 171
E +IGSG +A A + L Q A ++A +A+ AAD
Sbjct: 171 YDATGGRYEEQRYHSIGSGSVFARGAIKKLYRDDLDQTGAAKVALEALYDAAD 223
>gi|311900014|dbj|BAJ32422.1| putative 20S proteasome beta-subunit [Kitasatospora setae KM-6054]
Length = 281
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ DG VV+AGD + ++G + + + KV + + + G AG++ A ++
Sbjct: 51 HGTTIVAAVFDGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVR 109
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 110 LFQLELEHY 118
>gi|254508515|ref|ZP_05120633.1| methyl-accepting chemotaxis protein [Vibrio parahaemolyticus 16]
gi|219548540|gb|EED25547.1| methyl-accepting chemotaxis protein [Vibrio parahaemolyticus 16]
Length = 626
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 14/115 (12%)
Query: 11 VKMHATTI-LTVRKDGVVVIAGDGQV---SLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+K ATTI + + G+V + D Q S +++ N + ++ + +AGF S +
Sbjct: 142 LKQLATTIEKKIEETGMVTLNSDFQAMVKSQQNYLLQPNEQNLKLFNRA--MAGFE-SMS 198
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
+ + +LE EK++EQY + +R S + + L ++E +L++ +T +I
Sbjct: 199 NVYAMLELYEKEIEQYKSTFVRVS-------ELSQQLGSVEQQLLVSKAQLTKII 246
>gi|116670723|ref|YP_831656.1| proteasome subunit beta [Arthrobacter sp. FB24]
gi|302595820|sp|A0JWY6|PSB_ARTS2 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|116610832|gb|ABK03556.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01B [Arthrobacter sp. FB24]
Length = 275
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+++ G V++AGD + ++G + + KV +++ G AG++ A L
Sbjct: 51 HATTIVSLTYGGGVLMAGDRRATMGNVIASRHIEKVFPADSYSVL-GIAGTAGIAIDLTR 109
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 110 LFQVELEHY 118
>gi|254819642|ref|ZP_05224643.1| PrcB [Mycobacterium intracellulare ATCC 13950]
Length = 292
Score = 34.7 bits (78), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 25/181 (13%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA--FTL 71
H TTI+ ++ G VV+AGD + + G + + +KV + G AG++A A F
Sbjct: 56 HGTTIVALKYPGGVVLAGDRRSTQGNMIAGRDVKKVY-ITDDYTATGIAGTAAIAVEFAR 114
Query: 72 LERLE----KKLEQYPNQLLRSSVELAKDWR--MDKYLRNLEAMILI------------A 113
L +E +KLE P LA R + ++ L A+ L+ A
Sbjct: 115 LYAVELEHYEKLEGVPLTFAGKVNRLAIMVRGNLAAAMQGLVALPLLVGYDIDAPDPEGA 174
Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAA 170
+ ++ G G LE E G ++GSG +A S+ + L S +SA +A +A+ AA
Sbjct: 175 GRIVSFDAAG-GWNLEEEEGYQSVGSGSIFAKSSMKKLYSQVTDADSAVRVAIEALYDAA 233
Query: 171 D 171
D
Sbjct: 234 D 234
>gi|217071334|gb|ACJ84027.1| unknown [Medicago truncatula]
Length = 232
Score = 34.7 bits (78), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 19/169 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L N+ +GS+AD+ + +
Sbjct: 13 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQL-TDNVYVCRSGSAADSQVVSDY 71
Query: 75 LEKKLEQYPNQLLR-SSVELAKDW-RMDKY--LRNLEAMILIA--DK----TITLVITGM 124
+ L Q+ QL + ++V++A + R+ Y NL+ +++ DK I V G
Sbjct: 72 VRYFLHQHTIQLGQPATVKVAANLVRLLAYNNKNNLQTGLIVGGWDKYEGGQIYGVPLGG 131
Query: 125 GDVLEPENGVMAIG-SGGSY---ALSAARALMSTQNSAEEIARKAMSIA 169
V +P AIG SG SY A T++ AE++ +KA+S+A
Sbjct: 132 TIVQQP----FAIGGSGSSYLYGFFDQAWKDGMTKDEAEDLVKKAVSLA 176
>gi|257054464|ref|YP_003132296.1| hypothetical protein Svir_03920 [Saccharomonospora viridis DSM
43017]
gi|256584336|gb|ACU95469.1| hypothetical protein Svir_03920 [Saccharomonospora viridis DSM
43017]
Length = 195
Score = 34.7 bits (78), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERL + E++ +++ + +LA RM + LEA AD++IT+V G + + +
Sbjct: 5 FERLLAQFERFQSKIKKVDDQLANVERMQSEIAELEATASNADRSITIVAGPGGAIKDIQ 64
Query: 132 NGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAAD 171
A+ S ALSA ALMST Q + E ARK +I D
Sbjct: 65 LTDKAL-SQQPQALSA--ALMSTIQEAVAEAARKQAAIVDD 102
>gi|302036324|ref|YP_003796646.1| putative proteasome subunit beta [Candidatus Nitrospira defluvii]
gi|300604388|emb|CBK40720.1| putative Proteasome, beta subunit [Candidatus Nitrospira
defluvii]
Length = 257
Score = 34.7 bits (78), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 15 ATTILTVR-KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
ATTIL ++ +DGV+V AGD + + G VM KV + + +++A AG A A+ ++
Sbjct: 33 ATTILALKYRDGVLV-AGDRRATAGNMVMYDRTDKVLEIDRYSVMA-IAGVPATAYEMVR 90
Query: 74 RLEKKLEQY 82
LE + Y
Sbjct: 91 VLEHSFKYY 99
>gi|58268196|ref|XP_571254.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113318|ref|XP_774684.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257328|gb|EAL20037.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227489|gb|AAW43947.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 272
Score = 34.7 bits (78), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
+IL + +IAGD + S G ++ ARKV +L ++A GFA AD ++R
Sbjct: 33 SILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLATNGFA---ADGNNFVKR 89
Query: 75 LEKKLEQY 82
++++LE Y
Sbjct: 90 VKQRLEWY 97
>gi|256832436|ref|YP_003161163.1| 20S proteasome A and B subunits [Jonesia denitrificans DSM 20603]
gi|302595738|sp|C7R403|PSB_JONDD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|256685967|gb|ACV08860.1| 20S proteasome A and B subunits [Jonesia denitrificans DSM 20603]
Length = 302
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 77/183 (42%), Gaps = 40/183 (21%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H TTI+ + ++IAGD + ++G T+ KV + + IA AG++ A
Sbjct: 46 IAPHGTTIVALEYHNGIIIAGDRRATMGTTIAHREIEKVFAADEHSAIA-IAGTAGLAIE 104
Query: 71 LLERLEKKLEQY------P----------NQLLRSSVELAKDWRMDKYLRNLEAMILIA- 113
L+ + +LE Y P + +LRS + LA L+ L + + A
Sbjct: 105 LVRLFQLELEHYEKIEGTPLSLDGKANRLSTMLRSHLHLA--------LQGLPIVPIFAG 156
Query: 114 -DKT------ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
D T +TG G EP GSG +A SA + L Q A +A+
Sbjct: 157 WDSTRHQGRLFAYDVTG-GRYEEPN--FTCAGSGSVFARSALKKLWKPQLDAT----RAI 209
Query: 167 SIA 169
+IA
Sbjct: 210 TIA 212
>gi|145221439|ref|YP_001132117.1| metal dependent phosphohydrolase [Mycobacterium gilvum PYR-GCK]
gi|145213925|gb|ABP43329.1| metal dependent phosphohydrolase [Mycobacterium gilvum PYR-GCK]
Length = 497
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 19 LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
L+ +DGV+ +VS G ++ AR V +LG FT+ R+
Sbjct: 171 LSALRDGVLDTPAAPEVSFGDDPLRMLRAARFVSQLG---------------FTVAPRVR 215
Query: 77 KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGDVLEPENG 133
+ LE+ +QL R + E + L+ ++L AD L V TG+G+V+ PE G
Sbjct: 216 RALEEMSSQLSRITAE--------RVAAELDKLLLGADPVAGLDLMVDTGLGEVVLPEVG 267
Query: 134 VM 135
M
Sbjct: 268 AM 269
>gi|226306661|ref|YP_002766621.1| 20S proteasome beta-type subunit [Rhodococcus erythropolis PR4]
gi|75491637|sp|Q53083|PSB2_RHOER RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PrcB 2; Flags: Precursor
gi|302595780|sp|C0ZZU7|PSB_RHOE4 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|847774|gb|AAC45736.1| proteasome beta-type subunit 2 [Rhodococcus erythropolis]
gi|226185778|dbj|BAH33882.1| 20S proteasome beta-type subunit [Rhodococcus erythropolis PR4]
Length = 292
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G V++AGD + ++G + + +KV + AG AG++ A L+
Sbjct: 58 HGTTIVAISYAGGVLLAGDRRATMGNLIASRDVQKV-YVTDDYSAAGIAGTAGIAIELVR 116
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG---DVLEP 130
+LE Y V L D + ++ + + A + + +V +G D ++P
Sbjct: 117 LFAVELEHYEKI---EGVPLTFDGKANRLSSMVRGNLGAAMQGLAVVPLLVGYDLDAVDP 173
Query: 131 EN------------------GVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIA 169
G A+GSG +A SA + L S +++A A +A+ A
Sbjct: 174 SRAGRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKLYSPGIDEDTALRFAVEALYDA 233
Query: 170 AD 171
AD
Sbjct: 234 AD 235
>gi|315446809|ref|YP_004079688.1| tRNA adenylyltransferase [Mycobacterium sp. Spyr1]
gi|315265112|gb|ADU01854.1| tRNA adenylyltransferase [Mycobacterium sp. Spyr1]
Length = 486
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 19 LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
L+ +DGV+ +VS G ++ AR V +LG FT+ R+
Sbjct: 160 LSALRDGVLDTPAAPEVSFGDDPLRMLRAARFVSQLG---------------FTVAPRVR 204
Query: 77 KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGDVLEPENG 133
+ LE+ +QL R + E + L+ ++L AD L V TG+G+V+ PE G
Sbjct: 205 RALEEMSSQLSRITAE--------RVAAELDKLLLGADPVAGLDLMVDTGLGEVVLPEVG 256
Query: 134 VM 135
M
Sbjct: 257 AM 258
>gi|325118907|emb|CBZ54459.1| Proteasome subunit beta type-7, related [Neospora caninum
Liverpool]
Length = 242
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V G VV+ D + S G V+ ARK+ R+ + + +GS+AD + + +
Sbjct: 43 TTIVAVSFQGGVVLGADTRTSAGSYVVNRAARKISRVHE-RMCVCRSGSAADTQAVTQIV 101
Query: 76 EKKLEQYPNQLLR 88
+ ++QY +L +
Sbjct: 102 KLYIQQYAQELPK 114
>gi|167379227|ref|XP_001735049.1| proteasome subunit beta type-6 precursor [Entamoeba dispar
SAW760]
gi|165903089|gb|EDR28742.1| proteasome subunit beta type-6 precursor, putative [Entamoeba
dispar SAW760]
Length = 213
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G V++ DG+ S+G V+ K+R + +I AG+SA + T+ +
Sbjct: 14 GTTIIGVVYNGGVLLGADGRTSMGSIVVNRCKNKIRMVSD-SIGMCMAGTSAHSETIADY 72
Query: 75 LEKKLEQYPNQLLRSSVELA 94
+ L Y Q LA
Sbjct: 73 VRHSLRMYTAQTREEPTVLA 92
>gi|168182426|ref|ZP_02617090.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum Bf]
gi|182674466|gb|EDT86427.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum Bf]
Length = 356
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 14/119 (11%)
Query: 41 VMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSV---ELAKDW 97
+++A KVR LG A AG + + E L K++ YP+ R+S + KD+
Sbjct: 54 MLQAEKFKVRELG-----AESAGINVTLRGMGEALGSKMD-YPSD--RASYLIDPVLKDY 105
Query: 98 RMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
+M L N+E + +D + +++ +G + + + IGSG S +SAA A+ T N
Sbjct: 106 KM---LDNMEVVNPYSDGRLPIILKALGKIKKELGNEVNIGSGVSGPISAASAVRGTNN 161
>gi|237794835|ref|YP_002862387.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum Ba4 str. 657]
gi|229262946|gb|ACQ53979.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum Ba4 str. 657]
Length = 356
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 14/119 (11%)
Query: 41 VMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSV---ELAKDW 97
+++A KVR LG A AG + + E L K++ YP+ R+S + KD+
Sbjct: 54 MLQAEKFKVRELG-----AESAGINVTLRGMGEALGSKMD-YPSD--RASYLIDPVLKDY 105
Query: 98 RMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
+M L N+E + +D + +++ +G + + + IGSG S +SAA A+ T N
Sbjct: 106 KM---LDNMEVVNPYSDGRLPIILKALGKIKKELGNEVNIGSGVSGPISAASAVRGTNN 161
>gi|119716870|ref|YP_923835.1| proteasome subunit beta [Nocardioides sp. JS614]
gi|302595778|sp|A1SK13|PSB_NOCSJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|119537531|gb|ABL82148.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01B [Nocardioides sp. JS614]
Length = 283
Score = 34.3 bits (77), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ G VV+AGD + ++G + + + KV + + + G AGS+ A ++
Sbjct: 47 HGTTIVAATFPGGVVMAGDRRATMGNIIAQRDIEKVFPADEFSAV-GIAGSAGLAVEMVR 105
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 106 LFQTELEHY 114
>gi|14591201|ref|NP_143277.1| proteasome beta subunit precursor [Pyrococcus horikoshii OT3]
gi|17380245|sp|O50110|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome
core protein PsmB 2; Flags: Precursor
gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
[Pyrococcus horikoshii OT3]
Length = 207
Score = 34.3 bits (77), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TT+ V KDGVV +A D + SLG + N K+ ++ + IAG AG D L+ L
Sbjct: 12 TTVGIVCKDGVV-LAADRRASLGNIIYARNVTKIHKIDEHLAIAG-AGDVGDILNLVRLL 69
Query: 76 EKKLEQYPNQ 85
+ + Y +Q
Sbjct: 70 RAEAKLYYSQ 79
>gi|153806217|ref|ZP_01958885.1| hypothetical protein BACCAC_00472 [Bacteroides caccae ATCC 43185]
gi|149130894|gb|EDM22100.1| hypothetical protein BACCAC_00472 [Bacteroides caccae ATCC 43185]
Length = 459
Score = 34.3 bits (77), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADA TLL+RLE E + LRS ++L MD ++ +EA I IT + TG
Sbjct: 137 ADAHTLLDRLEN--ECGTTEHLRSMLQL-----MDDTIKQIEARISSNKNGITGLPTGFS 189
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
D+ + + G + AAR + + A +AR A S I +++
Sbjct: 190 DL----DRLTCGWQPGDEVVIAARPAVGKTSFALHLARAAASAGYHIAIFS 236
>gi|289580197|ref|YP_003478663.1| 20S proteasome A and subunit betas [Natrialba magadii ATCC 43099]
gi|289529750|gb|ADD04101.1| 20S proteasome A and B subunits [Natrialba magadii ATCC 43099]
Length = 250
Score = 34.3 bits (77), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 23/137 (16%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
++ TT+ V DG VV+A D + SL G+ V ARKV +G + FAGS +A
Sbjct: 10 IETGTTTVGLVGADG-VVLAADTRASLGGRFVTNRTARKVVPVGDHTALT-FAGSVGEAQ 67
Query: 70 TLLERLEKKLEQYPNQLLRS-SVE----LAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
T + +L + +Y + R+ SVE +A D ++LE LV+ G
Sbjct: 68 TFVRQLRAERSRYEHATDRTPSVETTATVAGDLLRGGPYQHLE-----------LVLGGT 116
Query: 125 GDVLEPENGVMAIGSGG 141
PE V +G GG
Sbjct: 117 ----FPEPAVYQVGPGG 129
>gi|194898667|ref|XP_001978889.1| GG11178 [Drosophila erecta]
gi|190650592|gb|EDV47847.1| GG11178 [Drosophila erecta]
Length = 322
Score = 34.3 bits (77), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ + DG V+I + + + + +RK+ +L + NI AG AG + D L++ +
Sbjct: 50 TTIVGIVFDGGVIIGAESRATSANIIPSNRSRKISQL-QTNIFAGGAGVAGDTTALMQLM 108
Query: 76 EKKLE 80
+LE
Sbjct: 109 RAQLE 113
>gi|307107838|gb|EFN56080.1| hypothetical protein CHLNCDRAFT_22624 [Chlorella variabilis]
Length = 239
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 10 AVKMHAT---------TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
AVK HAT T++ V D V+A ++S G +++ N K+ +L +IA
Sbjct: 17 AVKQHATWSPYDDNGGTVVAVAGDDYCVVAASTRMSTGYSILTRNKSKILQLNPKCVIAS 76
Query: 61 FAGSSADAFTLLERLEKKLEQY 82
AG AD TL + L + Y
Sbjct: 77 -AGMQADQETLHKVLHSRHVTY 97
>gi|300813792|ref|ZP_07094099.1| helicase C-terminal domain protein [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300512082|gb|EFK39275.1| helicase C-terminal domain protein [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 2547
Score = 34.3 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 41/103 (39%), Gaps = 24/103 (23%)
Query: 45 NARKVRRLGKGNIIAGFAGSSADAFTLL-----------ERLEKKLEQYPNQLLRSSVEL 93
NA + LGK F+ S+ T L ERL + LE Y L + VEL
Sbjct: 2256 NAHTFKLLGKAEYFGEFSNSTDGNITRLDNAIEKMPSRLERLNQNLENYKESLENAKVEL 2315
Query: 94 AKDWRMDKYLRNLEAMILIADKTITLV----ITGMGDVLEPEN 132
K + LR DKT+ L + MG+V E EN
Sbjct: 2316 TKPFEKADELR---------DKTLRLAEINKLLDMGEVEELEN 2349
>gi|195376901|ref|XP_002047231.1| GJ13326 [Drosophila virilis]
gi|194154389|gb|EDW69573.1| GJ13326 [Drosophila virilis]
Length = 328
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT++ + + V+I D + + V A + K+RRL NI G +G ++D L +
Sbjct: 42 GTTVVGLHFNKGVMIGTDTRATRRNIVSSAESPKIRRL-HNNIYCGGSGYASDLDNLTQL 100
Query: 75 LEKKLE 80
LEK+LE
Sbjct: 101 LEKQLE 106
>gi|50550679|ref|XP_502812.1| YALI0D14058p [Yarrowia lipolytica]
gi|49648680|emb|CAG81000.1| YALI0D14058p [Yarrowia lipolytica]
Length = 261
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
TTI+ + DG VVIA D + + G V N K+ R+ AG AG++AD
Sbjct: 30 TTIVGCKFDGGVVIAADTRATSGDIVADKNCEKLHRIAPHIWCAG-AGTAAD 80
>gi|323445273|gb|EGB01969.1| hypothetical protein AURANDRAFT_9896 [Aureococcus
anophagefferens]
Length = 150
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T L + V+A D ++S G ++M K+ +LG ++A AG D L++ L+
Sbjct: 10 TTLAISGADFAVVAADTRMSTGYSIMTRKMSKLHQLGPNTVLAA-AGCQTDVVCLVDVLK 68
Query: 77 KKLEQYPNQ 85
+ + Y +Q
Sbjct: 69 TRQKMYKHQ 77
>gi|159118134|ref|XP_001709286.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
gi|157437402|gb|EDO81612.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
Length = 254
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
TI+ + +IAGD ++S G ++ N RKV + I+ +G AD LL+ ++
Sbjct: 57 TIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFPV-TDKIVYAASGMHADVQRLLKHMK 115
Query: 77 KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
+ +Y L++ E+A +++++R L AM+
Sbjct: 116 IESTEY---YLKTQKEIA----IEQFIRLLSAMM 142
>gi|198463833|ref|XP_002135596.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
gi|198151431|gb|EDY74223.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
Length = 216
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T+L + VVI GD ++S G ++ K+ L K ++A G DA +L L+
Sbjct: 16 TVLAIAGKDFVVIGGDTRLSSGCAILSRTQTKLCPLSKQMVVAA-TGCGCDAVSLTNLLK 74
Query: 77 KKLEQYPNQ 85
K + Y NQ
Sbjct: 75 VKQQGYENQ 83
Searching..................................................done
Results from round 2
>gi|254780828|ref|YP_003065241.1| ATP-dependent protease peptidase subunit [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040505|gb|ACT57301.1| ATP-dependent protease peptidase subunit [Candidatus Liberibacter
asiaticus str. psy62]
Length = 190
Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats.
Identities = 190/190 (100%), Positives = 190/190 (100%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG
Sbjct: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV
Sbjct: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI
Sbjct: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
Query: 181 VLETLKVGDE 190
VLETLKVGDE
Sbjct: 181 VLETLKVGDE 190
>gi|312114750|ref|YP_004012346.1| 20S proteasome A and subunit betas [Rhodomicrobium vannielii ATCC
17100]
gi|311219879|gb|ADP71247.1| 20S proteasome A and B subunits [Rhodomicrobium vannielii ATCC
17100]
Length = 190
Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats.
Identities = 131/183 (71%), Positives = 156/183 (85%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
H H TTILTVRK G VVIAGDGQVSLGQTV+KANA+KVR LGKGN+I+GFAG++A
Sbjct: 8 PHDPTGWHGTTILTVRKGGRVVIAGDGQVSLGQTVIKANAKKVRTLGKGNVISGFAGATA 67
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ERLE KLE YP+QL+R+ V+LAKDWR D+YLR LEAM+++ADK TLV+TG GD
Sbjct: 68 DAFTLFERLESKLEMYPDQLVRACVDLAKDWRTDRYLRRLEAMMIVADKNATLVLTGTGD 127
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
VLEPE+ +M IGSGG+YALSAARAL+ T SAE+IARKAM+IAADICVYTN+NI++E+L
Sbjct: 128 VLEPEHAIMGIGSGGNYALSAARALLDTDLSAEDIARKAMAIAADICVYTNNNIIVESLP 187
Query: 187 VGD 189
D
Sbjct: 188 SND 190
>gi|83594928|ref|YP_428680.1| ATP-dependent protease peptidase subunit [Rhodospirillum rubrum
ATCC 11170]
gi|83577842|gb|ABC24393.1| 20S proteasome, A and B subunits [Rhodospirillum rubrum ATCC 11170]
Length = 187
Score = 307 bits (786), Expect = 7e-82, Method: Composition-based stats.
Identities = 117/181 (64%), Positives = 147/181 (81%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
++ H TTIL+VRK+G VVIAGDGQV+ G TVMKANARKVR L G++IAGFAG+
Sbjct: 7 SPSDNSIVWHGTTILSVRKNGKVVIAGDGQVTFGNTVMKANARKVRPLAGGSVIAGFAGA 66
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
+ADAFTL ERLE KLEQYP QL R+ VE+AKDWR D+YLR LEAM+ +ADK ++LV+TG
Sbjct: 67 TADAFTLFERLETKLEQYPGQLTRACVEMAKDWRTDRYLRRLEAMMAVADKGVSLVLTGT 126
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
GDVLEPE+G++ IGSGG +AL+AARAL+S E IAR++++IAADIC+YTNHN+ +E
Sbjct: 127 GDVLEPEDGLIGIGSGGPFALAAARALVSEDLDPEVIARRSLAIAADICIYTNHNLTVEV 186
Query: 185 L 185
L
Sbjct: 187 L 187
>gi|306842804|ref|ZP_07475444.1| ATP-dependent protease peptidase subunit [Brucella sp. BO2]
gi|306286998|gb|EFM58509.1| ATP-dependent protease peptidase subunit [Brucella sp. BO2]
Length = 211
Score = 306 bits (785), Expect = 9e-82, Method: Composition-based stats.
Identities = 136/182 (74%), Positives = 160/182 (87%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 30 EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 89
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 90 DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 149
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
VLEPE GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM+IAADIC+YTNHNI++E+L
Sbjct: 150 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESLD 209
Query: 187 VG 188
Sbjct: 210 AQ 211
>gi|115522399|ref|YP_779310.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
palustris BisA53]
gi|115516346|gb|ABJ04330.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodopseudomonas palustris BisA53]
Length = 190
Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats.
Identities = 125/181 (69%), Positives = 151/181 (83%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
+ H TTILTVRK G VVI GDGQVS+GQTV+K NA+KVRRLGKG++I GFAG+
Sbjct: 8 AGEGSPPVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKHNAKKVRRLGKGDVIGGFAGA 67
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
+ADAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG
Sbjct: 68 TADAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGT 127
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
GDVLEPE GVMAIGSGG+YAL+AARAL+ T+ AE I RKA++IAADICVYTN ++ +ET
Sbjct: 128 GDVLEPEAGVMAIGSGGNYALAAARALVDTEQDAEAIVRKALAIAADICVYTNGHVTIET 187
Query: 185 L 185
L
Sbjct: 188 L 188
>gi|90417287|ref|ZP_01225213.1| Peptidase component of the HslUV protease (Heat shock protein)
[marine gamma proteobacterium HTCC2207]
gi|90330872|gb|EAS46135.1| Peptidase component of the HslUV protease (Heat shock protein)
[marine gamma proteobacterium HTCC2207]
Length = 181
Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats.
Identities = 106/178 (59%), Positives = 134/178 (75%), Gaps = 1/178 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR++G VVI GDGQVSLG TVMK NARKVRRL +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTILSVRRNGKVVIGGDGQVSLGNTVMKGNARKVRRLYNDKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLEQ+ L R++VELAKDWR D+ LR LEA++ +AD +L+ITG GDV++PE
Sbjct: 63 FERFEAKLEQHQGNLTRAAVELAKDWRSDRILRKLEALLAVADSEASLIITGNGDVIQPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+ ++AIGSGG +A SAARAL+ +T+ SA +I + + IA DIC+YTNHN LE L
Sbjct: 123 DDLIAIGSGGPFAQSAARALLDNTEMSARDIVEQGLKIAGDICIYTNHNRTLEELDSN 180
>gi|66824981|ref|XP_645845.1| hypothetical protein DDB_G0269282 [Dictyostelium discoideum AX4]
gi|60474054|gb|EAL71991.1| hypothetical protein DDB_G0269282 [Dictyostelium discoideum AX4]
Length = 324
Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats.
Identities = 110/183 (60%), Positives = 141/183 (77%), Gaps = 1/183 (0%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+M ATTIL+VR++G VVI GDGQV+LG +++K NA+K+R+L G IIAGFAGS ADA
Sbjct: 72 DPYRMKATTILSVRRNGKVVIIGDGQVTLGHSIVKPNAKKIRKLSDGKIIAGFAGSVADA 131
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL E LE+KL ++ LL+S VELA+ WR DKY R LEA +++ADK ITL I G GDVL
Sbjct: 132 FTLFELLERKLTEHRGLLLKSCVELAQQWRTDKYYRRLEASLIVADKDITLNIDGNGDVL 191
Query: 129 EPENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
EP +G++AIGSGG +ALSAARAL++ EEIAR++M IAADIC+YTNHN +LE +
Sbjct: 192 EPNDGILAIGSGGDFALSAARALLTVPDLDPEEIARRSMKIAADICIYTNHNFILEVIDS 251
Query: 188 GDE 190
+E
Sbjct: 252 NNE 254
>gi|254470862|ref|ZP_05084265.1| ATP-dependent protease HslV [Pseudovibrio sp. JE062]
gi|211960004|gb|EEA95201.1| ATP-dependent protease HslV [Pseudovibrio sp. JE062]
Length = 182
Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats.
Identities = 125/180 (69%), Positives = 146/180 (81%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ H TTILTVRK G VVIAGDGQVSLG TV+K ARKVR L G +IAGFAG++ADA
Sbjct: 3 EPEQWHGTTILTVRKGGKVVIAGDGQVSLGSTVIKGTARKVRPLAGGKVIAGFAGATADA 62
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL ERLE KLEQYPNQL+R+ VE+AKDWR D+YLR LEAM+L+ADK +LV+TG GDVL
Sbjct: 63 FTLFERLEAKLEQYPNQLMRACVEMAKDWRTDRYLRRLEAMMLVADKKHSLVLTGTGDVL 122
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
EPENGVM IGSGG++ALSAARAL+ +AEEI RK+M+IAADICVYTN N+ +E L
Sbjct: 123 EPENGVMGIGSGGNFALSAARALVDMDLTAEEICRKSMTIAADICVYTNSNVTVEILDEE 182
>gi|54293624|ref|YP_126039.1| ATP-dependent protease peptidase subunit [Legionella pneumophila
str. Lens]
gi|81601493|sp|Q5WYQ9|HSLV_LEGPL RecName: Full=ATP-dependent protease subunit HslV
gi|53753456|emb|CAH14911.1| Peptidase component of the HslUV protease (Heat shock protein)
[Legionella pneumophila str. Lens]
Length = 182
Score = 304 bits (780), Expect = 4e-81, Method: Composition-based stats.
Identities = 107/175 (61%), Positives = 138/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ VVI GDGQV+LG TVMK NARKVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QFHGTTILSVRRGNQVVIGGDGQVTLGNTVMKGNARKVRRLYKDKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE + L+R++VELAKDWR D+ LR LEA++ +AD +L+ITG GDV+EPE
Sbjct: 63 FERFEAKLEMHQGHLIRAAVELAKDWRTDRILRRLEAVLAVADSKASLIITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++AIGSGG +A +AARALM +TQ SA+EI +K+++IA DIC+YTN+N+ +E L
Sbjct: 123 ESLIAIGSGGPFAQAAARALMENTQLSAKEIVQKSLTIAGDICIYTNNNLTIEEL 177
>gi|62290924|ref|YP_222717.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 1
str. 9-941]
gi|82700835|ref|YP_415409.1| ATP-dependent protease peptidase subunit [Brucella melitensis
biovar Abortus 2308]
gi|189025137|ref|YP_001935905.1| ATP-dependent protease peptidase subunit [Brucella abortus S19]
gi|237816431|ref|ZP_04595424.1| ATP-dependent protease hslV [Brucella abortus str. 2308 A]
gi|254696330|ref|ZP_05158158.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 2
str. 86/8/59]
gi|254731246|ref|ZP_05189824.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 4
str. 292]
gi|260546186|ref|ZP_05821926.1| pyridine nucleotide-disulphide oxidoreductase [Brucella abortus
NCTC 8038]
gi|260758977|ref|ZP_05871325.1| ATP-dependent protease hslV [Brucella abortus bv. 4 str. 292]
gi|260760701|ref|ZP_05873044.1| ATP-dependent protease hslV [Brucella abortus bv. 2 str. 86/8/59]
gi|75496073|sp|Q57AH8|HSLV_BRUAB RecName: Full=ATP-dependent protease subunit HslV
gi|123547310|sp|Q2YQZ3|HSLV_BRUA2 RecName: Full=ATP-dependent protease subunit HslV
gi|238065812|sp|B2S979|HSLV_BRUA1 RecName: Full=ATP-dependent protease subunit HslV
gi|62197056|gb|AAX75356.1| HslV, heat shock protein [Brucella abortus bv. 1 str. 9-941]
gi|82616936|emb|CAJ12037.1| Pyridine nucleotide-disulphide oxidoreductase,
class-II:Multispecific proteasome protease [Brucella
melitensis biovar Abortus 2308]
gi|189020709|gb|ACD73431.1| Pyridine nucleotide-disulphide oxidoreductase, class-II [Brucella
abortus S19]
gi|237788498|gb|EEP62713.1| ATP-dependent protease hslV [Brucella abortus str. 2308 A]
gi|260096293|gb|EEW80169.1| pyridine nucleotide-disulphide oxidoreductase [Brucella abortus
NCTC 8038]
gi|260669295|gb|EEX56235.1| ATP-dependent protease hslV [Brucella abortus bv. 4 str. 292]
gi|260671133|gb|EEX57954.1| ATP-dependent protease hslV [Brucella abortus bv. 2 str. 86/8/59]
Length = 184
Score = 304 bits (779), Expect = 5e-81, Method: Composition-based stats.
Identities = 136/182 (74%), Positives = 160/182 (87%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGTTA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
VLEPE GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM+IAADIC+YTNHNI++E+L
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESLD 182
Query: 187 VG 188
Sbjct: 183 AQ 184
>gi|52840877|ref|YP_094676.1| ATP-dependent protease peptidase subunit [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|54296663|ref|YP_123032.1| ATP-dependent protease peptidase subunit [Legionella pneumophila
str. Paris]
gi|148360706|ref|YP_001251913.1| heat shock protein HslVU [Legionella pneumophila str. Corby]
gi|296106228|ref|YP_003617928.1| heat shock protein [Legionella pneumophila 2300/99 Alcoy]
gi|81378038|sp|Q5ZXU1|HSLV_LEGPH RecName: Full=ATP-dependent protease subunit HslV
gi|81601974|sp|Q5X7B1|HSLV_LEGPA RecName: Full=ATP-dependent protease subunit HslV
gi|166222984|sp|A5IGR7|HSLV_LEGPC RecName: Full=ATP-dependent protease subunit HslV
gi|52627988|gb|AAU26729.1| heat shock protein, HslVU, proteasome-related peptidase subunit
[Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|53750448|emb|CAH11842.1| Peptidase component of the HslUV protease (Heat shock protein)
[Legionella pneumophila str. Paris]
gi|148282479|gb|ABQ56567.1| heat shock protein, HslVU, proteasome-related peptidase subunit
[Legionella pneumophila str. Corby]
gi|158512134|gb|ABW69095.1| ATP-dependent protease peptidase subunit [Legionella pneumophila]
gi|295648129|gb|ADG23976.1| heat shock protein [Legionella pneumophila 2300/99 Alcoy]
gi|307609438|emb|CBW98928.1| peptidase component of the HslUV protease [Legionella pneumophila
130b]
Length = 182
Score = 303 bits (778), Expect = 6e-81, Method: Composition-based stats.
Identities = 108/175 (61%), Positives = 138/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ VVI GDGQV+LG TVMK NARKVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QFHGTTILSVRRGNQVVIGGDGQVTLGNTVMKGNARKVRRLYKDKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE + L+R++VELAKDWR D+ LR LEA++ +AD +L+ITG GDV+EPE
Sbjct: 63 FERFEAKLEMHQGHLIRAAVELAKDWRTDRILRRLEAVLAVADSKASLIITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++AIGSGG +A +AARALM +TQ SA+EI +KA++IA DIC+YTN+N+ +E L
Sbjct: 123 ESLIAIGSGGPFAQAAARALMENTQLSAKEIVQKALTIAGDICIYTNNNLTIEEL 177
>gi|148251767|ref|YP_001236352.1| ATP-dependent protease peptidase subunit [Bradyrhizobium sp. BTAi1]
gi|166221626|sp|A5E8F2|HSLV_BRASB RecName: Full=ATP-dependent protease subunit HslV
gi|146403940|gb|ABQ32446.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Bradyrhizobium sp. BTAi1]
Length = 186
Score = 303 bits (778), Expect = 6e-81, Method: Composition-based stats.
Identities = 125/186 (67%), Positives = 150/186 (80%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ H H TTILTVRK G VVI GDGQVS+GQTV+K+NARKVR+LGKG++I GFA
Sbjct: 1 MHATSHEPAVWHGTTILTVRKGGRVVIGGDGQVSIGQTVIKSNARKVRKLGKGDVIGGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+T
Sbjct: 61 GATADAFTLFERLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKEVSLVLT 120
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
G GDVLEPE GVMAIGSGG+YAL+AARAL+ T AE I R+++ IAADICVYTN NI +
Sbjct: 121 GTGDVLEPEAGVMAIGSGGNYALAAARALIDTDKDAESIVRRSLDIAADICVYTNRNITI 180
Query: 183 ETLKVG 188
E L
Sbjct: 181 EALAAE 186
>gi|239833122|ref|ZP_04681451.1| ATP-dependent protease hslV [Ochrobactrum intermedium LMG 3301]
gi|239825389|gb|EEQ96957.1| ATP-dependent protease hslV [Ochrobactrum intermedium LMG 3301]
Length = 184
Score = 303 bits (778), Expect = 6e-81, Method: Composition-based stats.
Identities = 134/182 (73%), Positives = 160/182 (87%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H+ ++ TTI+TVRK G VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHHPTTIYGTTIVTVRKGGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
VLEPE+GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM IAADIC+YTNHN+++E+L
Sbjct: 123 VLEPEHGVMAIGSGGNYALAAARALVDTDKSAEEIARKAMEIAADICIYTNHNVIVESLD 182
Query: 187 VG 188
Sbjct: 183 AE 184
>gi|254498811|ref|ZP_05111522.1| ATP-dependent protease peptidase subunit [Legionella drancourtii
LLAP12]
gi|254351975|gb|EET10799.1| ATP-dependent protease peptidase subunit [Legionella drancourtii
LLAP12]
Length = 182
Score = 303 bits (777), Expect = 7e-81, Method: Composition-based stats.
Identities = 107/175 (61%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR+ VVI GDGQV+LG TVMK NARKVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QFRGTTILSVRRGNQVVIGGDGQVTLGNTVMKGNARKVRRLYKEQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE + L+R++VELAKDWR D+ LR LEA++ +AD +L+ITG GDV+EPE
Sbjct: 63 FERFESKLEMHQGHLVRAAVELAKDWRTDRILRRLEAVLAVADSKSSLIITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++AIGSGG +A +AARALM +T SA EI RKA++IA DIC+YTN+N+ +E L
Sbjct: 123 ESLIAIGSGGPFAQAAARALMQNTDLSAVEIVRKALTIAGDICIYTNNNLTIEEL 177
>gi|23502928|ref|NP_699055.1| ATP-dependent protease peptidase subunit [Brucella suis 1330]
gi|161619993|ref|YP_001593880.1| ATP-dependent protease peptidase subunit [Brucella canis ATCC
23365]
gi|163844098|ref|YP_001628502.1| ATP-dependent protease peptidase subunit [Brucella suis ATCC 23445]
gi|225853511|ref|YP_002733744.1| ATP-dependent protease peptidase subunit [Brucella melitensis ATCC
23457]
gi|254690213|ref|ZP_05153467.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 6
str. 870]
gi|254694703|ref|ZP_05156531.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 3
str. Tulya]
gi|254700712|ref|ZP_05162540.1| ATP-dependent protease peptidase subunit [Brucella suis bv. 5 str.
513]
gi|254705084|ref|ZP_05166912.1| ATP-dependent protease peptidase subunit [Brucella suis bv. 3 str.
686]
gi|254707399|ref|ZP_05169227.1| ATP-dependent protease peptidase subunit [Brucella pinnipedialis
M163/99/10]
gi|254709058|ref|ZP_05170869.1| ATP-dependent protease peptidase subunit [Brucella pinnipedialis
B2/94]
gi|256030583|ref|ZP_05444197.1| ATP-dependent protease peptidase subunit [Brucella pinnipedialis
M292/94/1]
gi|256045684|ref|ZP_05448562.1| ATP-dependent protease peptidase subunit [Brucella melitensis bv. 1
str. Rev.1]
gi|256060045|ref|ZP_05450227.1| ATP-dependent protease peptidase subunit [Brucella neotomae 5K33]
gi|256112405|ref|ZP_05453326.1| ATP-dependent protease peptidase subunit [Brucella melitensis bv. 3
str. Ether]
gi|256258468|ref|ZP_05464004.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 9
str. C68]
gi|256263007|ref|ZP_05465539.1| pyridine nucleotide-disulphide oxidoreductase [Brucella melitensis
bv. 2 str. 63/9]
gi|256370478|ref|YP_003107989.1| ATP-dependent protease peptidase subunit [Brucella microti CCM
4915]
gi|260567449|ref|ZP_05837919.1| pyridine nucleotide-disulphide oxidoreductase [Brucella suis bv. 4
str. 40]
gi|260755753|ref|ZP_05868101.1| ATP-dependent protease hslV [Brucella abortus bv. 6 str. 870]
gi|260884779|ref|ZP_05896393.1| ATP-dependent protease hslV [Brucella abortus bv. 9 str. C68]
gi|261215030|ref|ZP_05929311.1| ATP-dependent protease hslV [Brucella abortus bv. 3 str. Tulya]
gi|261314886|ref|ZP_05954083.1| ATP-dependent protease hslV [Brucella pinnipedialis M163/99/10]
gi|261316556|ref|ZP_05955753.1| ATP-dependent protease hslV [Brucella pinnipedialis B2/94]
gi|261324021|ref|ZP_05963218.1| ATP-dependent protease hslV [Brucella neotomae 5K33]
gi|261751221|ref|ZP_05994930.1| heat shock protein hslV [Brucella suis bv. 5 str. 513]
gi|261755786|ref|ZP_05999495.1| ATP-dependent protease hslV [Brucella suis bv. 3 str. 686]
gi|265987630|ref|ZP_06100187.1| ATP-dependent protease hslV [Brucella pinnipedialis M292/94/1]
gi|265992105|ref|ZP_06104662.1| ATP-dependent protease hslV [Brucella melitensis bv. 1 str. Rev.1]
gi|265993842|ref|ZP_06106399.1| ATP-dependent protease hslV [Brucella melitensis bv. 3 str. Ether]
gi|294851309|ref|ZP_06791982.1| ATP-dependent protease hslV [Brucella sp. NVSL 07-0026]
gi|297247308|ref|ZP_06931026.1| ATP-dependent protease hslV [Brucella abortus bv. 5 str. B3196]
gi|306843499|ref|ZP_07476100.1| ATP-dependent protease peptidase subunit [Brucella sp. BO1]
gi|38258147|sp|Q8FY11|HSLV_BRUSU RecName: Full=ATP-dependent protease subunit HslV
gi|189043930|sp|A9M9R4|HSLV_BRUC2 RecName: Full=ATP-dependent protease subunit HslV
gi|189043931|sp|B0CJI0|HSLV_BRUSI RecName: Full=ATP-dependent protease subunit HslV
gi|254802407|sp|C0RFW8|HSLV_BRUMB RecName: Full=ATP-dependent protease subunit HslV
gi|23348961|gb|AAN30970.1| heat shock protein HslV [Brucella suis 1330]
gi|161336804|gb|ABX63109.1| ATP-dependent protease hslV [Brucella canis ATCC 23365]
gi|163674821|gb|ABY38932.1| ATP-dependent protease hslV [Brucella suis ATCC 23445]
gi|225641876|gb|ACO01790.1| ATP-dependent protease hslV [Brucella melitensis ATCC 23457]
gi|256000641|gb|ACU49040.1| ATP-dependent protease peptidase subunit [Brucella microti CCM
4915]
gi|260156967|gb|EEW92047.1| pyridine nucleotide-disulphide oxidoreductase [Brucella suis bv. 4
str. 40]
gi|260675861|gb|EEX62682.1| ATP-dependent protease hslV [Brucella abortus bv. 6 str. 870]
gi|260874307|gb|EEX81376.1| ATP-dependent protease hslV [Brucella abortus bv. 9 str. C68]
gi|260916637|gb|EEX83498.1| ATP-dependent protease hslV [Brucella abortus bv. 3 str. Tulya]
gi|261295779|gb|EEX99275.1| ATP-dependent protease hslV [Brucella pinnipedialis B2/94]
gi|261300001|gb|EEY03498.1| ATP-dependent protease hslV [Brucella neotomae 5K33]
gi|261303912|gb|EEY07409.1| ATP-dependent protease hslV [Brucella pinnipedialis M163/99/10]
gi|261740974|gb|EEY28900.1| heat shock protein hslV [Brucella suis bv. 5 str. 513]
gi|261745539|gb|EEY33465.1| ATP-dependent protease hslV [Brucella suis bv. 3 str. 686]
gi|262764823|gb|EEZ10744.1| ATP-dependent protease hslV [Brucella melitensis bv. 3 str. Ether]
gi|263003171|gb|EEZ15464.1| ATP-dependent protease hslV [Brucella melitensis bv. 1 str. Rev.1]
gi|263092880|gb|EEZ17055.1| pyridine nucleotide-disulphide oxidoreductase [Brucella melitensis
bv. 2 str. 63/9]
gi|264659827|gb|EEZ30088.1| ATP-dependent protease hslV [Brucella pinnipedialis M292/94/1]
gi|294819898|gb|EFG36897.1| ATP-dependent protease hslV [Brucella sp. NVSL 07-0026]
gi|297174477|gb|EFH33824.1| ATP-dependent protease hslV [Brucella abortus bv. 5 str. B3196]
gi|306276190|gb|EFM57890.1| ATP-dependent protease peptidase subunit [Brucella sp. BO1]
gi|326410078|gb|ADZ67143.1| ATP-dependent protease peptidase subunit [Brucella melitensis M28]
gi|326539794|gb|ADZ88009.1| ATP-dependent protease hslV [Brucella melitensis M5-90]
Length = 184
Score = 303 bits (777), Expect = 7e-81, Method: Composition-based stats.
Identities = 136/182 (74%), Positives = 160/182 (87%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
VLEPE GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM+IAADIC+YTNHNI++E+L
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESLD 182
Query: 187 VG 188
Sbjct: 183 AQ 184
>gi|153008175|ref|YP_001369390.1| ATP-dependent protease peptidase subunit [Ochrobactrum anthropi
ATCC 49188]
gi|166222988|sp|A6WX57|HSLV_OCHA4 RecName: Full=ATP-dependent protease subunit HslV
gi|151560063|gb|ABS13561.1| 20S proteasome A and B subunits [Ochrobactrum anthropi ATCC 49188]
Length = 184
Score = 303 bits (777), Expect = 8e-81, Method: Composition-based stats.
Identities = 134/182 (73%), Positives = 159/182 (87%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H+ ++ TTI+TVRK VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHHPTTIYGTTIVTVRKGNKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
VLEPE+GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM IAADIC+YTNHNI++E+L
Sbjct: 123 VLEPEHGVMAIGSGGNYALAAARALVDTDKSAEEIARKAMDIAADICIYTNHNIIVESLD 182
Query: 187 VG 188
Sbjct: 183 AE 184
>gi|209364281|ref|YP_001425417.2| ATP-dependent protease peptidase subunit [Coxiella burnetii Dugway
5J108-111]
gi|207082214|gb|ABS76743.2| ATP-dependent endopeptidase hsl proteolytic subunit [Coxiella
burnetii Dugway 5J108-111]
Length = 204
Score = 303 bits (777), Expect = 8e-81, Method: Composition-based stats.
Identities = 108/189 (57%), Positives = 143/189 (75%), Gaps = 1/189 (0%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
+ V ++ + TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL G +IAG
Sbjct: 15 LTVKALENGVEQFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAG 74
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
FAG +ADAFTL ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD +L+
Sbjct: 75 FAGGTADAFTLFERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLI 134
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHN 179
ITG+GDV+EPE +MAIGSGGS+A +AA+AL+ +T+ SA +I KA++IAADIC+YTN N
Sbjct: 135 ITGLGDVIEPEQSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNQN 194
Query: 180 IVLETLKVG 188
+E L
Sbjct: 195 FTIEELDSE 203
>gi|148559699|ref|YP_001259885.1| ATP-dependent protease peptidase subunit [Brucella ovis ATCC 25840]
gi|166221628|sp|A5VT38|HSLV_BRUO2 RecName: Full=ATP-dependent protease subunit HslV
gi|148370956|gb|ABQ60935.1| heat shock protein HslV [Brucella ovis ATCC 25840]
Length = 184
Score = 303 bits (777), Expect = 8e-81, Method: Composition-based stats.
Identities = 136/182 (74%), Positives = 159/182 (87%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKATLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
VLEPE GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM+IAADIC+YTNHNI++E+L
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESLD 182
Query: 187 VG 188
Sbjct: 183 AQ 184
>gi|90421827|ref|YP_530197.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
palustris BisB18]
gi|90103841|gb|ABD85878.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodopseudomonas palustris BisB18]
Length = 190
Score = 303 bits (777), Expect = 8e-81, Method: Composition-based stats.
Identities = 123/183 (67%), Positives = 150/183 (81%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
+ H TTILTVRK G VVI GDGQVS+GQTV+K+NARKVR+LGKG++I GFAG+
Sbjct: 8 SGEGSPQVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNARKVRKLGKGDVIGGFAGA 67
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
+ADAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG
Sbjct: 68 TADAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKEVSLVLTGT 127
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
GDVLEPE GVMAIGSGG+YAL+AARAL+ + AE I R+++ IAADICVYTN N+ +ET
Sbjct: 128 GDVLEPEAGVMAIGSGGNYALAAARALIDSDKDAEAIVRRSLDIAADICVYTNRNVTVET 187
Query: 185 LKV 187
L
Sbjct: 188 LSA 190
>gi|188579891|ref|YP_001923336.1| ATP-dependent protease peptidase subunit [Methylobacterium populi
BJ001]
gi|179343389|gb|ACB78801.1| 20S proteasome A and B subunits [Methylobacterium populi BJ001]
Length = 206
Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats.
Identities = 122/178 (68%), Positives = 148/178 (83%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG++I GFAG++ADAFT
Sbjct: 29 PQMHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGSVIGGFAGATADAFT 88
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+ADK ++L+++G GDVLEP
Sbjct: 89 LFERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADKDVSLLLSGSGDVLEP 148
Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
E GVMAIGSGG++AL+AARAL ++ AE I R++M IAA+ICVYTN N+V+E L G
Sbjct: 149 ETGVMAIGSGGNFALAAARALEDGEHDAEAIVRRSMKIAAEICVYTNGNLVIEALDAG 206
>gi|220933248|ref|YP_002512147.1| 20S proteasome A and B subunits [Thioalkalivibrio sp. HL-EbGR7]
gi|254765620|sp|B8GTA0|HSLV_THISH RecName: Full=ATP-dependent protease subunit HslV
gi|219994558|gb|ACL71160.1| 20S proteasome A and B subunits [Thioalkalivibrio sp. HL-EbGR7]
Length = 177
Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats.
Identities = 100/175 (57%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI+ VR++G V + GDGQV+LG TVMK NARKVRRL ++AGFAG +ADAFTL
Sbjct: 3 QFRGTTIVCVRRNGRVALGGDGQVTLGNTVMKGNARKVRRLYGDKVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE+Y L R++VELAKDWR ++ LR LEA++ +ADK +L+ITG GDV+EPE
Sbjct: 63 FERFEGKLEKYSGNLTRAAVELAKDWRTERALRRLEALLAVADKETSLLITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++A+GSGG +A +AARAL+ +T+ SA EIA +A++IAADIC+YTN ++ +E +
Sbjct: 123 DNLIAMGSGGPFAQAAARALLDNTELSAREIAERALNIAADICIYTNRHLTIEEM 177
>gi|226938938|ref|YP_002794009.1| ATP-dependent protease peptidase subunit [Laribacter hongkongensis
HLHK9]
gi|226713862|gb|ACO73000.1| HslV [Laribacter hongkongensis HLHK9]
Length = 241
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 104/181 (57%), Positives = 135/181 (74%), Gaps = 1/181 (0%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
+H + TTI++VR+ V + GDGQV+LG V+KA ARKVRRL ++AGFAG +
Sbjct: 61 QEHSMQQFDGTTIVSVRRGNQVALGGDGQVTLGNIVIKATARKVRRLFNDTVLAGFAGGT 120
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTL+ER E KL++Y L S++ELAKDWR D+ LR LEAM+++AD TLVITG G
Sbjct: 121 ADAFTLIERFEAKLQKYQGNLTISAIELAKDWRSDRALRRLEAMLIVADLERTLVITGNG 180
Query: 126 DVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
DVLEPE G+ AIGSGG+YA SAARAL+ +T+ +I +K++ IA DIC+YTNHN V+ET
Sbjct: 181 DVLEPEQGIAAIGSGGAYAQSAARALLENTELPPADIVKKSLEIAGDICIYTNHNHVIET 240
Query: 185 L 185
L
Sbjct: 241 L 241
>gi|209883548|ref|YP_002287405.1| ATP-dependent protease HslV [Oligotropha carboxidovorans OM5]
gi|229486363|sp|B6JAL5|HSLV_OLICO RecName: Full=ATP-dependent protease subunit HslV
gi|209871744|gb|ACI91540.1| ATP-dependent protease HslV [Oligotropha carboxidovorans OM5]
Length = 183
Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats.
Identities = 123/180 (68%), Positives = 150/180 (83%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
A H TTILTVRK G VVI GDGQVS+GQTV+K+NARKVR+LGKG++I GFAG++
Sbjct: 2 QNSQAESWHGTTILTVRKGGRVVIGGDGQVSIGQTVIKSNARKVRKLGKGDVIGGFAGAT 61
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTL ERLE KLEQYP QL R+ VELAKDWR D+YLR LEAM+++ADK ++LV+TG G
Sbjct: 62 ADAFTLFERLEAKLEQYPGQLTRACVELAKDWRTDRYLRRLEAMMIVADKEVSLVLTGTG 121
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GVMAIGSGG+YAL+AARAL +++ AE I R+++ IAADICVYTN N+ +E L
Sbjct: 122 DVLEPEDGVMAIGSGGNYALAAARALSDSEHDAETIVRRSLEIAADICVYTNRNVTIEAL 181
>gi|17988330|ref|NP_540964.1| ATP-dependent protease peptidase subunit [Brucella melitensis bv. 1
str. 16M]
gi|260562985|ref|ZP_05833471.1| heat shock protein hslV [Brucella melitensis bv. 1 str. 16M]
gi|21759172|sp|Q8YE31|HSLV_BRUME RecName: Full=ATP-dependent protease subunit HslV
gi|17984105|gb|AAL53228.1| heat shock protein hslv [Brucella melitensis bv. 1 str. 16M]
gi|260153001|gb|EEW88093.1| heat shock protein hslV [Brucella melitensis bv. 1 str. 16M]
Length = 184
Score = 301 bits (773), Expect = 2e-80, Method: Composition-based stats.
Identities = 135/182 (74%), Positives = 159/182 (87%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVEL KDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRASVELTKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
VLEPE GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM+IAADIC+YTNHNI++E+L
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESLD 182
Query: 187 VG 188
Sbjct: 183 AQ 184
>gi|39933385|ref|NP_945661.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
palustris CGA009]
gi|47605596|sp|P61477|HSLV_RHOPA RecName: Full=ATP-dependent protease subunit HslV
gi|39653010|emb|CAE25752.1| heat shock protein HslV, proteasome-related peptidase subunit
[Rhodopseudomonas palustris CGA009]
Length = 189
Score = 301 bits (773), Expect = 2e-80, Method: Composition-based stats.
Identities = 126/181 (69%), Positives = 149/181 (82%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
H TTILTVRK G VVI GDGQVS+GQTV+KANA+KVR+LGKG++I GFAG+
Sbjct: 7 SADAGPPVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGA 66
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
+ADAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG
Sbjct: 67 TADAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGT 126
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
GDVLEPE GVMAIGSGG+YAL+AARAL+ T AE I RK++ IAADICVYTN N+ LET
Sbjct: 127 GDVLEPEAGVMAIGSGGNYALAAARALIDTDQDAETIVRKSLGIAADICVYTNGNLTLET 186
Query: 185 L 185
L
Sbjct: 187 L 187
>gi|316931712|ref|YP_004106694.1| 20S proteasome subunits A/B [Rhodopseudomonas palustris DX-1]
gi|315599426|gb|ADU41961.1| 20S proteasome A and B subunits [Rhodopseudomonas palustris DX-1]
Length = 187
Score = 301 bits (773), Expect = 2e-80, Method: Composition-based stats.
Identities = 125/177 (70%), Positives = 149/177 (84%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TTILTVRK G VVI GDGQVS+GQTV+KANA+KVR+LGKG++I GFAG++ADA
Sbjct: 11 GPPVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADA 70
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVL
Sbjct: 71 FTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVL 130
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPE GVMAIGSGG+YAL+AARAL+ T AE I RK++ IAADICVYTN N+ +ETL
Sbjct: 131 EPEAGVMAIGSGGNYALAAARALIDTDQDAEAIVRKSLGIAADICVYTNGNLTIETL 187
>gi|270159287|ref|ZP_06187943.1| ATP-dependent protease HslV [Legionella longbeachae D-4968]
gi|289165889|ref|YP_003456027.1| Peptidase component of the HslUV protease (Heat shock protein)
[Legionella longbeachae NSW150]
gi|269987626|gb|EEZ93881.1| ATP-dependent protease HslV [Legionella longbeachae D-4968]
gi|288859062|emb|CBJ12991.1| Peptidase component of the HslUV protease (Heat shock protein)
[Legionella longbeachae NSW150]
Length = 182
Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats.
Identities = 106/175 (60%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR+ VVI GDGQV+LG TVMK NARKVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QFRGTTILSVRRGNQVVIGGDGQVTLGNTVMKGNARKVRRLYKDQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE + L+R++VELAKDWR D+ LR LEA++ +AD +L+ITG GDV+EPE
Sbjct: 63 FERFESKLEMHQGHLVRAAVELAKDWRTDRMLRRLEAVLAVADVRSSLIITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG +A +AARAL+ +T SA EI RKA+ IA DIC+YTN+++ LE L
Sbjct: 123 HSLIAIGSGGPFAQAAARALLENTDLSAMEIVRKALMIAGDICIYTNNHLTLEEL 177
>gi|225626460|ref|ZP_03784499.1| ATP-dependent protease hslV [Brucella ceti str. Cudo]
gi|254718123|ref|ZP_05179934.1| ATP-dependent protease peptidase subunit [Brucella sp. 83/13]
gi|256158579|ref|ZP_05456469.1| ATP-dependent protease peptidase subunit [Brucella ceti M490/95/1]
gi|256253990|ref|ZP_05459526.1| ATP-dependent protease peptidase subunit [Brucella ceti B1/94]
gi|260169489|ref|ZP_05756300.1| ATP-dependent protease peptidase subunit [Brucella sp. F5/99]
gi|261221130|ref|ZP_05935411.1| ATP-dependent protease hslV [Brucella ceti B1/94]
gi|261759014|ref|ZP_06002723.1| pyridine nucleotide-disulphide oxidoreductase [Brucella sp. F5/99]
gi|265983075|ref|ZP_06095810.1| ATP-dependent protease hslV [Brucella sp. 83/13]
gi|265997090|ref|ZP_06109647.1| ATP-dependent protease hslV [Brucella ceti M490/95/1]
gi|306839750|ref|ZP_07472552.1| ATP-dependent protease peptidase subunit [Brucella sp. NF 2653]
gi|225618117|gb|EEH15160.1| ATP-dependent protease hslV [Brucella ceti str. Cudo]
gi|260919714|gb|EEX86367.1| ATP-dependent protease hslV [Brucella ceti B1/94]
gi|261738998|gb|EEY26994.1| pyridine nucleotide-disulphide oxidoreductase [Brucella sp. F5/99]
gi|262551558|gb|EEZ07548.1| ATP-dependent protease hslV [Brucella ceti M490/95/1]
gi|264661667|gb|EEZ31928.1| ATP-dependent protease hslV [Brucella sp. 83/13]
gi|306405210|gb|EFM61487.1| ATP-dependent protease peptidase subunit [Brucella sp. NF 2653]
Length = 184
Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats.
Identities = 136/182 (74%), Positives = 160/182 (87%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRTSVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
VLEPE GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM+IAADIC+YTNHNI++E+L
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESLD 182
Query: 187 VG 188
Sbjct: 183 AQ 184
>gi|212219519|ref|YP_002306306.1| ATP-dependent protease peptidase subunit [Coxiella burnetii
CbuK_Q154]
gi|212013781|gb|ACJ21161.1| ATP-dependent endopeptidase hsl proteolytic subunit [Coxiella
burnetii CbuK_Q154]
Length = 204
Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats.
Identities = 108/187 (57%), Positives = 142/187 (75%), Gaps = 1/187 (0%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
V ++ + TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL G +IAGFA
Sbjct: 17 VKALENGVEQFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFA 76
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G +ADAFTL ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD +L+IT
Sbjct: 77 GGTADAFTLFERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIIT 136
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIV 181
G+GDV+EPE +MAIGSGGS+A +AA+AL+ +T+ SA +I KA++IAADIC+YTN N
Sbjct: 137 GLGDVIEPEQSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNLNFT 196
Query: 182 LETLKVG 188
+E L
Sbjct: 197 IEELDSE 203
>gi|212213471|ref|YP_002304407.1| ATP-dependent protease peptidase subunit [Coxiella burnetii
CbuG_Q212]
gi|215919319|ref|NP_820986.2| ATP-dependent protease peptidase subunit [Coxiella burnetii RSA
493]
gi|206584204|gb|AAO91500.2| ATP-dependent endopeptidase hsl proteolytic subunit [Coxiella
burnetii RSA 493]
gi|212011881|gb|ACJ19262.1| ATP-dependent endopeptidase hsl proteolytic subunit [Coxiella
burnetii CbuG_Q212]
Length = 204
Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats.
Identities = 108/189 (57%), Positives = 143/189 (75%), Gaps = 1/189 (0%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
+ V ++ + TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL G +IAG
Sbjct: 15 LTVKALENGVEQFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAG 74
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
FAG +ADAFTL ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD +L+
Sbjct: 75 FAGGTADAFTLFERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLI 134
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHN 179
ITG+GDV+EPE +MAIGSGGS+A +AA+AL+ +T+ SA +I KA++IAADIC+YTN N
Sbjct: 135 ITGLGDVIEPEQSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNLN 194
Query: 180 IVLETLKVG 188
+E L
Sbjct: 195 FTIEELDSE 203
>gi|53803704|ref|YP_114446.1| ATP-dependent protease peptidase subunit [Methylococcus capsulatus
str. Bath]
gi|85542206|sp|Q606K2|HSLV_METCA RecName: Full=ATP-dependent protease subunit HslV
gi|53757465|gb|AAU91756.1| ATP-dependent protease HslV [Methylococcus capsulatus str. Bath]
Length = 187
Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats.
Identities = 103/177 (58%), Positives = 137/177 (77%), Gaps = 1/177 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTI++VR+ VVI GDGQV+LG TVMK NARKVRRL G ++AGFAG++ADAFTL
Sbjct: 4 FHGTTIVSVRRGDQVVIGGDGQVTLGDTVMKGNARKVRRLYNGRVLAGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E +LE++ L +++VEL KDWR D+ LR LEA++ IAD +L+I+G GDV+EPEN
Sbjct: 64 ERFESQLEKHRGNLTKAAVELVKDWRTDRMLRRLEALLAIADDKASLIISGNGDVIEPEN 123
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
G++AIGSGG +A SAARAL+ +T+ A +I K++ IAADIC+YTN N+ +E L+ G
Sbjct: 124 GLIAIGSGGPFAQSAARALLENTELGARDIVEKSLIIAADICIYTNRNLTIEELETG 180
>gi|92115753|ref|YP_575482.1| ATP-dependent protease peptidase subunit [Nitrobacter hamburgensis
X14]
gi|122418928|sp|Q1QRX5|HSLV_NITHX RecName: Full=ATP-dependent protease subunit HslV
gi|91798647|gb|ABE61022.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Nitrobacter hamburgensis X14]
Length = 184
Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats.
Identities = 124/180 (68%), Positives = 149/180 (82%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TTILTVRK G VVI GDGQVS+GQTV+K+NA+KVR+LGKG++I GFAG++ADA
Sbjct: 5 QPEVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNAKKVRKLGKGDVIGGFAGATADA 64
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+L+ADK ++LV+TG GDVL
Sbjct: 65 FTLFERLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMLVADKDVSLVLTGTGDVL 124
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
EPE GVMAIGSGG+YALSAARAL+ + AE I R+++ IAADICVYTN N+ +ETL
Sbjct: 125 EPEAGVMAIGSGGNYALSAARALIDSDKDAETIVRRSLDIAADICVYTNRNLTIETLSTD 184
>gi|254713515|ref|ZP_05175326.1| ATP-dependent protease peptidase subunit [Brucella ceti M644/93/1]
gi|254716129|ref|ZP_05177940.1| ATP-dependent protease peptidase subunit [Brucella ceti M13/05/1]
gi|261217899|ref|ZP_05932180.1| ATP-dependent protease hslV [Brucella ceti M13/05/1]
gi|261321251|ref|ZP_05960448.1| ATP-dependent protease hslV [Brucella ceti M644/93/1]
gi|260922988|gb|EEX89556.1| ATP-dependent protease hslV [Brucella ceti M13/05/1]
gi|261293941|gb|EEX97437.1| ATP-dependent protease hslV [Brucella ceti M644/93/1]
Length = 184
Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats.
Identities = 136/179 (75%), Positives = 159/179 (88%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3 EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLEQYP+QL+R SVELAKDWR D+YLR LEAM+L+AD +TL +TG GD
Sbjct: 63 DAFTLLERLEAKLEQYPDQLMRVSVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM+IAADIC+YTNHNI++E+L
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESL 181
>gi|331005992|ref|ZP_08329335.1| ATP-dependent protease HslV [gamma proteobacterium IMCC1989]
gi|330420168|gb|EGG94491.1| ATP-dependent protease HslV [gamma proteobacterium IMCC1989]
Length = 179
Score = 300 bits (770), Expect = 5e-80, Method: Composition-based stats.
Identities = 105/176 (59%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI++VR++G VVI GDGQVS+G TVMK NARKVRRL +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTIVSVRRNGKVVIGGDGQVSMGNTVMKGNARKVRRLHNDQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+ + QL R++VELAK+WR D+ LR LEA++ +A+ +L+ITG GDV++PE
Sbjct: 63 FERFEAKLQAFNGQLTRAAVELAKEWRSDRALRKLEALLAVANHEASLIITGNGDVIQPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ ++AIGSGG YA SAARAL+ +T+ AE I RK+++IA DICVYTNHN +ETL+
Sbjct: 123 DDLIAIGSGGPYAQSAARALLENTELDAEAITRKSLTIAGDICVYTNHNHTIETLE 178
>gi|326403604|ref|YP_004283686.1| ATP-dependent protease subunit HslV [Acidiphilium multivorum
AIU301]
gi|325050466|dbj|BAJ80804.1| ATP-dependent protease subunit HslV [Acidiphilium multivorum
AIU301]
Length = 183
Score = 300 bits (769), Expect = 6e-80, Method: Composition-based stats.
Identities = 120/183 (65%), Positives = 150/183 (81%), Gaps = 1/183 (0%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + + V H TTIL VR+D V +AGDGQVSLG TV+K NARKVRR+G GN++AGFAG
Sbjct: 1 MMNTNDPVGWHGTTILCVRRDEQVAMAGDGQVSLGNTVVKGNARKVRRIGNGNVVAGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTLLERLE KLE++PNQL R+ VELAKDWR D+YLR LEAM+ +AD+T +TG
Sbjct: 61 ATADAFTLLERLEAKLERFPNQLERACVELAKDWRTDRYLRRLEAMMAVADRTHAYTLTG 120
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVL 182
GDVLEPE+G++AIGSGG+YAL+AARAL+S +AE+IAR+AM IA DICVYTNH++ +
Sbjct: 121 NGDVLEPEDGIIAIGSGGNYALAAARALISVDGMTAEDIARRAMKIAGDICVYTNHHVTV 180
Query: 183 ETL 185
E L
Sbjct: 181 EIL 183
>gi|330993963|ref|ZP_08317893.1| ATP-dependent protease subunit HslV [Gluconacetobacter sp. SXCC-1]
gi|329758909|gb|EGG75423.1| ATP-dependent protease subunit HslV [Gluconacetobacter sp. SXCC-1]
Length = 219
Score = 300 bits (769), Expect = 6e-80, Method: Composition-based stats.
Identities = 119/184 (64%), Positives = 146/184 (79%), Gaps = 2/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFA 62
H V H TTIL VR+ G V +AGDGQV+LG TV+K NARKVRR+G G I+AGFA
Sbjct: 27 HSSPHDPVGWHGTTILCVRRGGQVAMAGDGQVTLGATVIKGNARKVRRIGPTGQILAGFA 86
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD + +T
Sbjct: 87 GATADAFTLLERLENKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADAERSFTLT 146
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIV 181
G GDVLEPE+G++AIGSGG+YALSAARAL+ SA +IAR++M IA DICVYTNH+++
Sbjct: 147 GNGDVLEPEDGIIAIGSGGNYALSAARALLGIDGLSAVDIARRSMKIAGDICVYTNHSVI 206
Query: 182 LETL 185
+ETL
Sbjct: 207 VETL 210
>gi|189028443|sp|A9KH30|HSLV_COXBN RecName: Full=ATP-dependent protease subunit HslV
Length = 181
Score = 300 bits (769), Expect = 7e-80, Method: Composition-based stats.
Identities = 107/178 (60%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL G +IAGFAG +ADAFTL
Sbjct: 3 QFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD +L+ITG+GDV+EPE
Sbjct: 63 FERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+MAIGSGGS+A +AA+AL+ +T+ SA +I KA++IAADIC+YTN N +E L
Sbjct: 123 QSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNQNFTIEELDSE 180
>gi|258542119|ref|YP_003187552.1| ATP-dependent protease peptidase subunit [Acetobacter pasteurianus
IFO 3283-01]
gi|256633197|dbj|BAH99172.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-01]
gi|256636256|dbj|BAI02225.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-03]
gi|256639309|dbj|BAI05271.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-07]
gi|256642365|dbj|BAI08320.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-22]
gi|256645420|dbj|BAI11368.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-26]
gi|256648473|dbj|BAI14414.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-32]
gi|256651526|dbj|BAI17460.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654517|dbj|BAI20444.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
[Acetobacter pasteurianus IFO 3283-12]
Length = 199
Score = 300 bits (768), Expect = 8e-80, Method: Composition-based stats.
Identities = 119/188 (63%), Positives = 147/188 (78%), Gaps = 2/188 (1%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAG 63
H V H TTIL VR+ V +AGDGQV+LG TV+K NARKVRR+G + NI+AGFAG
Sbjct: 8 SSSHDPVGWHGTTILCVRRGAEVAMAGDGQVTLGSTVVKGNARKVRRIGPQDNILAGFAG 67
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD + +TG
Sbjct: 68 ATADAFTLLERLEAKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADAEHSFTLTG 127
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVL 182
GDVLEPE+G++AIGSGG+YALSAARAL++ AEEI R++M IA DICVYTNH++ +
Sbjct: 128 NGDVLEPEDGIIAIGSGGNYALSAARALLTVDGLGAEEIVRRSMKIAGDICVYTNHSVRV 187
Query: 183 ETLKVGDE 190
ETLK +
Sbjct: 188 ETLKAASD 195
>gi|254787488|ref|YP_003074917.1| ATP-dependent protease peptidase subunit [Teredinibacter turnerae
T7901]
gi|259491398|sp|C5BRK9|HSLV_TERTT RecName: Full=ATP-dependent protease subunit HslV
gi|237685056|gb|ACR12320.1| ATP-dependent protease HslVU, peptidase subunit [Teredinibacter
turnerae T7901]
Length = 179
Score = 300 bits (768), Expect = 9e-80, Method: Composition-based stats.
Identities = 106/176 (60%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL++R+ VVI GDGQVSLG T+MK NARKVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTILSIRRGNQVVIGGDGQVSLGNTIMKGNARKVRRLYKNQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE + QL+R++VELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE
Sbjct: 63 FERFEAKLESHGGQLVRAAVELAKDWRTDRALRRLEALLAVADKEASLIITGNGDVIQPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ ++AIGSGG++A SAARAL+ +T+ SA EI +K ++IA DIC+YTNHN +E L+
Sbjct: 123 DDLIAIGSGGAFAQSAARALLDNTELSAREIVQKGLTIAGDICIYTNHNQTIEELE 178
>gi|319778978|ref|YP_004129891.1| ATP-dependent protease HslV [Taylorella equigenitalis MCE9]
gi|317109002|gb|ADU91748.1| ATP-dependent protease HslV [Taylorella equigenitalis MCE9]
Length = 188
Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats.
Identities = 104/179 (58%), Positives = 137/179 (76%), Gaps = 1/179 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTIL VRK V I GDGQV+LG V+K +ARK+R+L +++GFAG++ADAFTL
Sbjct: 3 QFHATTILCVRKGDEVAIGGDGQVTLGNVVIKGSARKIRKLYHDKVLSGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ LLR++VEL KDWR D+ LR LEAM+++ADK TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGHLLRAAVELTKDWRTDRVLRRLEAMLIVADKDHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
GV AIGSGGSYA SAA+AL+ +T + EEI +K++ IA D+C+YTN N V++ L + +
Sbjct: 123 LGVAAIGSGGSYAQSAAQALLQNTDLTPEEIVKKSLEIAGDLCIYTNQNHVIQKLDIDE 181
>gi|329114129|ref|ZP_08242891.1| ATP-dependent protease subunit HslV [Acetobacter pomorum DM001]
gi|326696205|gb|EGE47884.1| ATP-dependent protease subunit HslV [Acetobacter pomorum DM001]
Length = 199
Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats.
Identities = 119/188 (63%), Positives = 147/188 (78%), Gaps = 2/188 (1%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAG 63
H V H TTIL VR+ V +AGDGQV+LG TV+K NARKVRR+G + NI+AGFAG
Sbjct: 8 SSSHDPVGWHGTTILCVRRGAEVAMAGDGQVTLGSTVVKGNARKVRRIGPQDNILAGFAG 67
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD + +TG
Sbjct: 68 ATADAFTLLERLEAKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADAEHSFTLTG 127
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVL 182
GDVLEPE+G++AIGSGG+YALSAARAL++ AEEI R++M IA DICVYTNH++ +
Sbjct: 128 NGDVLEPEDGIIAIGSGGNYALSAARALLTVDGLGAEEIVRRSMKIAGDICVYTNHSVRV 187
Query: 183 ETLKVGDE 190
ETLK +
Sbjct: 188 ETLKAASD 195
>gi|289207302|ref|YP_003459368.1| 20S proteasome A and subunit betas [Thioalkalivibrio sp. K90mix]
gi|288942933|gb|ADC70632.1| 20S proteasome A and B subunits [Thioalkalivibrio sp. K90mix]
Length = 180
Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats.
Identities = 102/178 (57%), Positives = 135/178 (75%), Gaps = 1/178 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI+ VRKDG V + GDGQVSLG TVMK NARKVRR+ I+AGFAG +ADAFTL
Sbjct: 3 QFRGTTIVCVRKDGAVTLGGDGQVSLGNTVMKGNARKVRRVYHDRILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E LE++ + R++VELAKDWR D+ LR LEA++ ++D+ + VI+G GDV+EPE
Sbjct: 63 FERFEGMLEKHSGNITRAAVELAKDWRTDRALRRLEALLAVSDRDNSFVISGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
N ++AIGSGG YA ++A+AL+ +T SA ++ K+++IAADICVYTNHNI LE+L
Sbjct: 123 NALIAIGSGGPYAQASAQALLQNTDLSARDVVEKSLNIAADICVYTNHNITLESLDAE 180
>gi|269103959|ref|ZP_06156656.1| ATP-dependent protease HslV [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163857|gb|EEZ42353.1| ATP-dependent protease HslV [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 175
Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats.
Identities = 105/172 (61%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + LL+++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLLKAAVELAKDWRTDRMLRKLEALLAVADETGSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A +AARAL+ +T A EIA K+++IA DICV+TNH+ +E L
Sbjct: 122 AIGSGGNFAQAAARALLENTDLDAREIAEKSLNIAGDICVFTNHHHTIEELD 173
>gi|240137219|ref|YP_002961688.1| ATP-dependent protease hslV [Methylobacterium extorquens AM1]
gi|240007185|gb|ACS38411.1| ATP-dependent protease hslV [Methylobacterium extorquens AM1]
Length = 186
Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats.
Identities = 125/178 (70%), Positives = 147/178 (82%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++ADAFT
Sbjct: 9 PQMHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGTVIGGFAGATADAFT 68
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+ADK ++L+++G GDVLEP
Sbjct: 69 LFERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADKEVSLLLSGAGDVLEP 128
Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
E GVMAIGSGG+YALSAARAL + AE I R++M IAA+ICVYTN N+V+ETL V
Sbjct: 129 ETGVMAIGSGGNYALSAARALEDGELDAEAIVRRSMKIAAEICVYTNGNLVIETLDVA 186
>gi|110635820|ref|YP_676028.1| ATP-dependent protease peptidase subunit [Mesorhizobium sp. BNC1]
gi|123353080|sp|Q11CL2|HSLV_MESSB RecName: Full=ATP-dependent protease subunit HslV
gi|110286804|gb|ABG64863.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Chelativorans sp. BNC1]
Length = 182
Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats.
Identities = 140/180 (77%), Positives = 159/180 (88%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ MH TTI+TVRK G VVIAGDGQVSLGQTVMK NARKVRR+GKGN+IAGFAG++ADA
Sbjct: 3 DNLTMHGTTIVTVRKGGKVVIAGDGQVSLGQTVMKGNARKVRRIGKGNVIAGFAGATADA 62
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTLLERLEKKLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+ADK +TL +TG GDVL
Sbjct: 63 FTLLERLEKKLEQYPDQLMRASVELAKDWRTDRYLRRLEAMMLVADKNVTLALTGTGDVL 122
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
EPE GVMAIGSGG+YAL+AARAL+ T SAEEIARKAM IAA ICVYTN NI++ETL G
Sbjct: 123 EPEEGVMAIGSGGNYALAAARALIDTDKSAEEIARKAMEIAASICVYTNSNIIVETLDAG 182
>gi|260460978|ref|ZP_05809227.1| 20S proteasome A and B subunits [Mesorhizobium opportunistum
WSM2075]
gi|259033012|gb|EEW34274.1| 20S proteasome A and B subunits [Mesorhizobium opportunistum
WSM2075]
Length = 183
Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats.
Identities = 136/181 (75%), Positives = 158/181 (87%), Gaps = 1/181 (0%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSSAD 67
+ MHATTI+TVRK VVIAGDGQVSLGQT+MK NARKVRR+GKG N+IAGFAG++AD
Sbjct: 3 DNLTMHATTIVTVRKGNKVVIAGDGQVSLGQTIMKGNARKVRRIGKGGNVIAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTLLERLE KLEQYP+QL R+ VELAKDWR D+YLR LEAM+L+ADK+++L +TG GDV
Sbjct: 63 AFTLLERLEAKLEQYPDQLTRACVELAKDWRTDRYLRRLEAMMLVADKSVSLALTGTGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
LEPE+GVMAIGSGG+YAL+AARALM T AEEIARKAM IA+DICVYTN+N V+ETL
Sbjct: 123 LEPEHGVMAIGSGGNYALAAARALMDTDKDAEEIARKAMQIASDICVYTNNNFVVETLDA 182
Query: 188 G 188
G
Sbjct: 183 G 183
>gi|161831128|ref|YP_001595965.1| ATP-dependent protease peptidase subunit [Coxiella burnetii RSA
331]
gi|189028444|sp|A9N9F9|HSLV_COXBR RecName: Full=ATP-dependent protease subunit HslV
gi|161762995|gb|ABX78637.1| ATP-dependent protease hslV [Coxiella burnetii RSA 331]
Length = 181
Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats.
Identities = 107/178 (60%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL G +IAGFAG +ADAFTL
Sbjct: 3 QFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD +L+ITG+GDV+EPE
Sbjct: 63 FERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+MAIGSGGS+A +AA+AL+ +T+ SA +I KA++IAADIC+YTN N +E L
Sbjct: 123 QSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNLNFTIEELDSE 180
>gi|148260412|ref|YP_001234539.1| ATP-dependent protease peptidase subunit [Acidiphilium cryptum
JF-5]
gi|189043927|sp|A5FYD8|HSLV_ACICJ RecName: Full=ATP-dependent protease subunit HslV
gi|146402093|gb|ABQ30620.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Acidiphilium cryptum JF-5]
Length = 182
Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats.
Identities = 119/181 (65%), Positives = 149/181 (82%), Gaps = 1/181 (0%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
+ + V H TTIL VR+D V +AGDGQVSLG TV+K NARKVRR+G GN++AGFAG++
Sbjct: 2 NTNDPVGWHGTTILCVRRDEQVAMAGDGQVSLGNTVVKGNARKVRRIGNGNVVAGFAGAT 61
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLE++PNQL R+ VELAKDWR D+YLR LEAM+ +AD+T +TG G
Sbjct: 62 ADAFTLLERLEAKLERFPNQLERACVELAKDWRTDRYLRRLEAMMAVADRTHAYTLTGNG 121
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLET 184
DVLEPE+G++AIGSGG+YAL+AARAL+S +AE+IAR+AM IA DICVYTNH++ +E
Sbjct: 122 DVLEPEDGIIAIGSGGNYALAAARALISVDGMTAEDIARRAMKIAGDICVYTNHHVTVEI 181
Query: 185 L 185
L
Sbjct: 182 L 182
>gi|110835105|ref|YP_693964.1| ATP-dependent protease peptidase subunit [Alcanivorax borkumensis
SK2]
gi|254429309|ref|ZP_05043016.1| peptidase, T1 family [Alcanivorax sp. DG881]
gi|123345320|sp|Q0VMA6|HSLV_ALCBS RecName: Full=ATP-dependent protease subunit HslV
gi|110648216|emb|CAL17692.1| heat shock protein HslV [Alcanivorax borkumensis SK2]
gi|196195478|gb|EDX90437.1| peptidase, T1 family [Alcanivorax sp. DG881]
Length = 180
Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats.
Identities = 105/177 (59%), Positives = 134/177 (75%), Gaps = 2/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI++VR+ VVI GDGQVSLG TVMK NARKVRRL G +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTIVSVRRGNNVVIGGDGQVSLGNTVMKGNARKVRRLFHGKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E +LE++ L+R++VELAKDWR D+ LR LEA++ +ADK +L+ITG GDV+EPE
Sbjct: 63 FERFEAQLEKHQGHLVRAAVELAKDWRTDRALRRLEALLAVADKESSLIITGNGDVIEPE 122
Query: 132 -NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG +A SAA AL+ +T A +I KA++IA DIC+YTNHN E L
Sbjct: 123 KDGLIAIGSGGPFAQSAATALLDNTDLPARDIVAKALTIAGDICIYTNHNHTFEELD 179
>gi|153206905|ref|ZP_01945723.1| ATP-dependent protease hslV [Coxiella burnetii 'MSU Goat Q177']
gi|165918152|ref|ZP_02218238.1| ATP-dependent protease hslV [Coxiella burnetii RSA 334]
gi|47605679|sp|Q83A95|HSLV_COXBU RecName: Full=ATP-dependent protease subunit HslV
gi|120576978|gb|EAX33602.1| ATP-dependent protease hslV [Coxiella burnetii 'MSU Goat Q177']
gi|165918012|gb|EDR36616.1| ATP-dependent protease hslV [Coxiella burnetii RSA 334]
Length = 181
Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats.
Identities = 107/178 (60%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL G +IAGFAG +ADAFTL
Sbjct: 3 QFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD +L+ITG+GDV+EPE
Sbjct: 63 FERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+MAIGSGGS+A +AA+AL+ +T+ SA +I KA++IAADIC+YTN N +E L
Sbjct: 123 QSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNLNFTIEELDSE 180
>gi|75674326|ref|YP_316747.1| ATP-dependent protease peptidase subunit [Nitrobacter winogradskyi
Nb-255]
gi|123614341|sp|Q3SWE6|HSLV_NITWN RecName: Full=ATP-dependent protease subunit HslV
gi|74419196|gb|ABA03395.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Nitrobacter winogradskyi Nb-255]
Length = 184
Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats.
Identities = 123/177 (69%), Positives = 148/177 (83%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TTILTVRK G VVI GDGQVS+GQTV+K+NA+KVR+LGKG++I GFAG++ADA
Sbjct: 5 QPETWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNAKKVRKLGKGDVIGGFAGATADA 64
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+L+ADK ++LV+TG GDVL
Sbjct: 65 FTLFERLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMLVADKDVSLVLTGTGDVL 124
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPE+GVMAIGSGG+YAL+AARAL+ + AE I R A+ IAADICVYTN N+ +E L
Sbjct: 125 EPESGVMAIGSGGNYALAAARALIDSDKDAETIVRSALDIAADICVYTNRNLTIEAL 181
>gi|296116620|ref|ZP_06835230.1| ATP-dependent protease peptidase subunit [Gluconacetobacter
hansenii ATCC 23769]
gi|295976832|gb|EFG83600.1| ATP-dependent protease peptidase subunit [Gluconacetobacter
hansenii ATCC 23769]
Length = 197
Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats.
Identities = 116/182 (63%), Positives = 145/182 (79%), Gaps = 2/182 (1%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGS 64
+ H + H TTIL VR+D V +AGDGQV+LG TV+K NARKVRR+G G+I+AGFAG+
Sbjct: 7 NPHDPIGWHGTTILCVRRDNQVAMAGDGQVTLGATVIKGNARKVRRIGPSGSILAGFAGA 66
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
+ADAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD + +TG
Sbjct: 67 TADAFTLLERLEAKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADADHSYTLTGN 126
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE+G++AIGSGG+YALSAARAL+ A EIA ++M IA DICVYTN+++ +E
Sbjct: 127 GDVLEPEDGIIAIGSGGNYALSAARALLGIDGLGAREIAERSMKIAGDICVYTNYSVTVE 186
Query: 184 TL 185
TL
Sbjct: 187 TL 188
>gi|206890532|ref|YP_002249197.1| ATP-dependent protease HslV [Thermodesulfovibrio yellowstonii DSM
11347]
gi|238065946|sp|B5YFZ9|HSLV_THEYD RecName: Full=ATP-dependent protease subunit HslV
gi|206742470|gb|ACI21527.1| ATP-dependent protease HslV [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 177
Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats.
Identities = 100/177 (56%), Positives = 135/177 (76%), Gaps = 1/177 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H TT+L V+++ V+IA DGQV++G TV+K NA+K+R+L G ++ GFAGS+ADAFT
Sbjct: 1 MDFHGTTVLCVKRNDSVIIASDGQVTMGNTVLKHNAKKIRKLYNGQVLTGFAGSTADAFT 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ER E KLE Y LLR++VELAKDWR DK LR LEA++++ADK L+I+G GDV+EP
Sbjct: 61 LFERFEGKLETYKGNLLRAAVELAKDWRTDKILRRLEALLIVADKEHILIISGNGDVIEP 120
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
E+ V AIGSGG +A +AA+AL +T+ A+EIA KAM IA+ IC+YTN+ I+ E L
Sbjct: 121 EDQVAAIGSGGPFAFAAAKALYDNTELPAKEIAIKAMEIASKICIYTNNIIITEELS 177
>gi|256823469|ref|YP_003147432.1| ATP-dependent protease peptidase subunit [Kangiella koreensis DSM
16069]
gi|256797008|gb|ACV27664.1| 20S proteasome A and B subunits [Kangiella koreensis DSM 16069]
Length = 179
Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats.
Identities = 105/176 (59%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR++G VVI GDGQVSLG T+MK NARKVRRL +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTILSVRRNGTVVIGGDGQVSLGNTIMKGNARKVRRLYNDQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER EKKLE + +L+R++VELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE
Sbjct: 63 FERFEKKLEAHGGKLMRAAVELAKDWRTDRALRRLEALLAVADKENSLIITGNGDVIQPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ ++AIGSGG +A SAA+ALM T SA EI ++IA D+C+YTNHN +E L
Sbjct: 123 DDLIAIGSGGPFAQSAAKALMQKTDLSAREIVETGLTIAGDVCIYTNHNQTIEELS 178
>gi|114328900|ref|YP_746057.1| ATP-dependent protease peptidase subunit [Granulibacter
bethesdensis CGDNIH1]
gi|114317074|gb|ABI63134.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
[Granulibacter bethesdensis CGDNIH1]
Length = 212
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 123/188 (65%), Positives = 151/188 (80%), Gaps = 2/188 (1%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAG 63
H V H TTIL VR+ V +AGDGQVSLGQTV+K NARKVRR+G G ++AGFAG
Sbjct: 25 ASSHDPVGWHGTTILCVRRGDTVTMAGDGQVSLGQTVVKGNARKVRRIGAGGQVLAGFAG 84
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTLLERLE KLE++PNQL R+ VELAKDWR D+YLR LEAM+ +AD+ + +TG
Sbjct: 85 ATADAFTLLERLEAKLERFPNQLERACVELAKDWRTDRYLRRLEAMMAVADQNRSFTLTG 144
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVL 182
GDVLEPE+G++AIGSGG+YALSAARALM+ + AEEIAR+AM IAADICVYTN N+++
Sbjct: 145 NGDVLEPEDGIIAIGSGGNYALSAARALMTVEGLEAEEIARRAMRIAADICVYTNGNVIV 204
Query: 183 ETLKVGDE 190
ETL+ E
Sbjct: 205 ETLRGEAE 212
>gi|150398456|ref|YP_001328923.1| ATP-dependent protease peptidase subunit [Sinorhizobium medicae
WSM419]
gi|189036241|sp|A6UEK8|HSLV_SINMW RecName: Full=ATP-dependent protease subunit HslV
gi|150029971|gb|ABR62088.1| 20S proteasome A and B subunits [Sinorhizobium medicae WSM419]
Length = 185
Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats.
Identities = 136/185 (73%), Positives = 161/185 (87%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + + MHATTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRRL KG++IAGFAG
Sbjct: 1 MSEHNPYGTMHATTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRLSKGDVIAGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTLLERLE KLEQYP+QL+R++VELAKDWR +KYLRNLEAM+L+AD+++TL ITG
Sbjct: 61 ATADAFTLLERLEVKLEQYPDQLMRAAVELAKDWRTNKYLRNLEAMMLVADRSVTLAITG 120
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE+G +AIGSGG+YA +AARALM T SAEEIAR+A+ IA DICVYTNHN+VLE
Sbjct: 121 NGDVLEPEHGTIAIGSGGNYAFAAARALMDTDRSAEEIARRALEIAGDICVYTNHNVVLE 180
Query: 184 TLKVG 188
TL
Sbjct: 181 TLDAE 185
>gi|163850086|ref|YP_001638129.1| ATP-dependent protease peptidase subunit [Methylobacterium
extorquens PA1]
gi|254559231|ref|YP_003066326.1| ATP-dependent protease hslV [Methylobacterium extorquens DM4]
gi|226704545|sp|A9W0F2|HSLV_METEP RecName: Full=ATP-dependent protease subunit HslV
gi|163661691|gb|ABY29058.1| 20S proteasome A and B subunits [Methylobacterium extorquens PA1]
gi|254266509|emb|CAX22273.1| ATP-dependent protease hslV [Methylobacterium extorquens DM4]
Length = 186
Score = 297 bits (762), Expect = 4e-79, Method: Composition-based stats.
Identities = 124/178 (69%), Positives = 146/178 (82%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++ADAFT
Sbjct: 9 PQMHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGTVIGGFAGATADAFT 68
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+ADK ++L+++G GDVLEP
Sbjct: 69 LFERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADKEVSLLLSGAGDVLEP 128
Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
E GVMAIGSGG+YALSAARAL + AE I R++M IAA+ICVYTN N+V+ETL
Sbjct: 129 ETGVMAIGSGGNYALSAARALEDGELDAEAIVRRSMKIAAEICVYTNGNLVIETLDAA 186
>gi|192360997|ref|YP_001980929.1| ATP-dependent protease peptidase subunit [Cellvibrio japonicus
Ueda107]
gi|238065849|sp|B3PI66|HSLV_CELJU RecName: Full=ATP-dependent protease subunit HslV
gi|190687162|gb|ACE84840.1| peptidase, T1 family superfamily [Cellvibrio japonicus Ueda107]
Length = 174
Score = 297 bits (762), Expect = 4e-79, Method: Composition-based stats.
Identities = 108/172 (62%), Positives = 132/172 (76%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR+DG VVI GDGQVSLG TVMK NARKVRRL K ++AGFAG +ADAFTL ER
Sbjct: 2 TTILSVRRDGQVVIGGDGQVSLGNTVMKGNARKVRRLYKNQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + QL R++VELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE+ ++
Sbjct: 62 EAKLESHNGQLTRAAVELAKDWRTDRSLRRLEALLAVADKEASLIITGNGDVIQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA +AARAL+ +TQ A I K + IA DICVYTN N +E L
Sbjct: 122 AIGSGGMYAQAAARALLENTQLDARNIVEKGLKIAGDICVYTNQNHTIEVLD 173
>gi|15963809|ref|NP_384162.1| ATP-dependent protease peptidase subunit [Sinorhizobium meliloti
1021]
gi|307310997|ref|ZP_07590642.1| 20S proteasome A and B subunits [Sinorhizobium meliloti BL225C]
gi|307321945|ref|ZP_07601327.1| 20S proteasome A and B subunits [Sinorhizobium meliloti AK83]
gi|15072984|emb|CAC41443.1| Probable heat shock protein [Sinorhizobium meliloti 1021]
gi|306892415|gb|EFN23219.1| 20S proteasome A and B subunits [Sinorhizobium meliloti AK83]
gi|306899677|gb|EFN30304.1| 20S proteasome A and B subunits [Sinorhizobium meliloti BL225C]
Length = 185
Score = 297 bits (762), Expect = 4e-79, Method: Composition-based stats.
Identities = 135/185 (72%), Positives = 161/185 (87%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + + MHATTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRRL KG++IAGFAG
Sbjct: 1 MSEHNPYGTMHATTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRLSKGDVIAGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTLLERLE KLEQYP+QL+R++VELAKDWR +KYLRNLEAM+L+AD+T+TL ITG
Sbjct: 61 ATADAFTLLERLEAKLEQYPDQLMRAAVELAKDWRTNKYLRNLEAMMLVADRTVTLAITG 120
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE+G +AIGSGG+YA +AARALM + SAEEIAR+A+ IA DICVYTNHN+V+E
Sbjct: 121 NGDVLEPEHGTIAIGSGGNYAFAAARALMDSDKSAEEIARRALEIAGDICVYTNHNVVVE 180
Query: 184 TLKVG 188
TL
Sbjct: 181 TLDAE 185
>gi|281205293|gb|EFA79485.1| Heat shock protein [Polysphondylium pallidum PN500]
Length = 290
Score = 297 bits (762), Expect = 4e-79, Method: Composition-based stats.
Identities = 111/181 (61%), Positives = 140/181 (77%), Gaps = 1/181 (0%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
++ ATTIL+VR+ VVI GDGQVS G +++K NA+K+RRL G I+AGFAGS ADA
Sbjct: 74 DPMRKKATTILSVRRGNKVVIIGDGQVSQGHSIVKPNAKKIRRLADGKIVAGFAGSVADA 133
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL E LEKKL ++ LL+S VELA+ WR DKY R LEA +++ADK ITL I G GDVL
Sbjct: 134 FTLFELLEKKLTEHRGLLLKSCVELAQQWRTDKYYRRLEASLIVADKDITLNIDGNGDVL 193
Query: 129 EPENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
EP +GV+AIGSGG +ALSAARAL++ AEEIAR++M IAADIC+YTNHN +LET+++
Sbjct: 194 EPNDGVLAIGSGGEFALSAARALLTVPDLDAEEIARRSMKIAADICIYTNHNFILETIEI 253
Query: 188 G 188
Sbjct: 254 D 254
>gi|162149055|ref|YP_001603516.1| ATP-dependent protease peptidase subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|161787632|emb|CAP57228.1| ATP-dependent protease hslV [Gluconacetobacter diazotrophicus PAl
5]
Length = 211
Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats.
Identities = 118/189 (62%), Positives = 148/189 (78%), Gaps = 2/189 (1%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGF 61
+ +H + H TTIL VR+ V +AGDGQV+LG TV+K NARKVRR+G +I+AGF
Sbjct: 16 IHASQHDPIGWHGTTILCVRRGAQVAMAGDGQVTLGATVIKGNARKVRRIGPSNSILAGF 75
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AG++ADAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD+ + +
Sbjct: 76 AGATADAFTLLERLEAKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADQERSFTL 135
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNI 180
TG GDVLEPE+G++AIGSGG+YALSAARAL SA EIAR+AM IA +ICVYTNH++
Sbjct: 136 TGNGDVLEPEDGIIAIGSGGNYALSAARALADIDGLSAAEIARRAMRIAGEICVYTNHSV 195
Query: 181 VLETLKVGD 189
+LETL +
Sbjct: 196 ILETLGPDE 204
>gi|312882761|ref|ZP_07742495.1| ATP-dependent protease peptidase subunit [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309369545|gb|EFP97063.1| ATP-dependent protease peptidase subunit [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 182
Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats.
Identities = 100/175 (57%), Positives = 139/175 (79%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAGS+ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGSTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AIGSGG++A +AA AL+ +++ A EIA K++ IA DICV+TNH+ +E L++ +
Sbjct: 122 AIGSGGNFAQAAATALLENSELDAREIAEKSLKIAGDICVFTNHHHTIEELEIVE 176
>gi|315178883|gb|ADT85797.1| ATP-dependent protease peptidase subunit [Vibrio furnissii NCTC
11218]
Length = 185
Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats.
Identities = 103/176 (58%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG++A +AA AL+ +T A EIA+KA+ IA DICV+TNH+ +E L++ E
Sbjct: 122 AIGSGGNFAQAAAIALLENTDLDAREIAQKALKIAGDICVFTNHHHTIEELEIPPE 177
>gi|227823915|ref|YP_002827888.1| ATP-dependent protease peptidase subunit [Sinorhizobium fredii
NGR234]
gi|254802420|sp|C3MBC6|HSLV_RHISN RecName: Full=ATP-dependent protease subunit HslV
gi|227342917|gb|ACP27135.1| ATP-dependent protease HslV [Sinorhizobium fredii NGR234]
Length = 185
Score = 297 bits (761), Expect = 6e-79, Method: Composition-based stats.
Identities = 135/185 (72%), Positives = 161/185 (87%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + + MHATTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRRL KG++IAGFAG
Sbjct: 1 MSEHNPYGTMHATTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRLSKGDVIAGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTLLERLE KLEQYP+QL+R++VELAKDWR +KYLRNLEAM+L+ADK++TL ITG
Sbjct: 61 ATADAFTLLERLEAKLEQYPDQLMRAAVELAKDWRTNKYLRNLEAMMLVADKSVTLAITG 120
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE+G +AIGSGG+YA +AARALM + SAEEIAR+A+ IA DICVYTNHN+V+E
Sbjct: 121 NGDVLEPEHGTIAIGSGGNYAFAAARALMDSDKSAEEIARRALQIAGDICVYTNHNVVME 180
Query: 184 TLKVG 188
TL
Sbjct: 181 TLDAD 185
>gi|296533580|ref|ZP_06896148.1| ATP-dependent protease HslVU [Roseomonas cervicalis ATCC 49957]
gi|296266088|gb|EFH12145.1| ATP-dependent protease HslVU [Roseomonas cervicalis ATCC 49957]
Length = 196
Score = 297 bits (761), Expect = 6e-79, Method: Composition-based stats.
Identities = 119/184 (64%), Positives = 147/184 (79%), Gaps = 1/184 (0%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ H + H TTIL VRKDG V +AGDGQVSLGQTV+K NARKVRR+ G ++ GFA
Sbjct: 13 MNASSHDPIGWHGTTILCVRKDGQVAMAGDGQVSLGQTVVKGNARKVRRIANGKVLTGFA 72
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTLLERLE KLE++P+QL R++VELAKDWR D+YLR LEA++ +ADK +L+IT
Sbjct: 73 GATADAFTLLERLEAKLERFPDQLERAAVELAKDWRTDRYLRRLEALLAVADKDRSLLIT 132
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIV 181
G GDVLEPE+ ++ IGSGG++AL+AARAL+ SAEEIA+KAM IAA ICVYTN V
Sbjct: 133 GNGDVLEPEDQIIGIGSGGNFALAAARALIDVDGLSAEEIAKKAMGIAAGICVYTNGRYV 192
Query: 182 LETL 185
LETL
Sbjct: 193 LETL 196
>gi|84390846|ref|ZP_00991538.1| ATP-dependent protease peptidase subunit [Vibrio splendidus 12B01]
gi|86147300|ref|ZP_01065614.1| ATP-dependent protease peptidase subunit [Vibrio sp. MED222]
gi|218710818|ref|YP_002418439.1| ATP-dependent protease peptidase subunit [Vibrio splendidus LGP32]
gi|254765622|sp|B7VLM6|HSLV_VIBSL RecName: Full=ATP-dependent protease subunit HslV
gi|84376649|gb|EAP93526.1| ATP-dependent protease peptidase subunit [Vibrio splendidus 12B01]
gi|85834865|gb|EAQ53009.1| ATP-dependent protease peptidase subunit [Vibrio sp. MED222]
gi|218323837|emb|CAV20198.1| ATP-dependent protease hslV [Vibrio splendidus LGP32]
Length = 182
Score = 296 bits (760), Expect = 7e-79, Method: Composition-based stats.
Identities = 100/172 (58%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL E+
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A +AA AL+ +T A EIA K+++IA DICV+TNH+ +E L+
Sbjct: 122 AIGSGGNFAQAAATALLENTDLDAREIAEKSLNIAGDICVFTNHHHTIEELE 173
>gi|288942672|ref|YP_003444912.1| 20S proteasome subunits A/B [Allochromatium vinosum DSM 180]
gi|288898044|gb|ADC63880.1| 20S proteasome A and B subunits [Allochromatium vinosum DSM 180]
Length = 182
Score = 296 bits (760), Expect = 7e-79, Method: Composition-based stats.
Identities = 111/179 (62%), Positives = 140/179 (78%), Gaps = 1/179 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTIL+VR+ VVI GDGQVSLG TVMK NARKVRRL KG ++AGFAG++ADAFTL
Sbjct: 4 LRGTTILSVRRGDTVVIGGDGQVSLGPTVMKGNARKVRRLYKGRVLAGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KLE++ L R++VE+AKDWR D+ LR LEA++ IAD T +L+++G GDV+EPE
Sbjct: 64 ERFEGKLEKHQGHLTRAAVEMAKDWRTDRMLRRLEALLCIADSTTSLILSGTGDVIEPEQ 123
Query: 133 GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
+MAIGSGGS+ALSAARAL +T+ A EI K++ IAADICVYTNHN+V+E L +
Sbjct: 124 DIMAIGSGGSFALSAARALVANTELPAREIVEKSLHIAADICVYTNHNLVIEELDAKTD 182
>gi|71905845|ref|YP_283432.1| ATP-dependent protease peptidase subunit [Dechloromonas aromatica
RCB]
gi|123628365|sp|Q47JL9|HSLV_DECAR RecName: Full=ATP-dependent protease subunit HslV
gi|71845466|gb|AAZ44962.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Dechloromonas aromatica RCB]
Length = 178
Score = 296 bits (759), Expect = 8e-79, Method: Composition-based stats.
Identities = 106/176 (60%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG V+KA ARKVRRL G I+AGFAG +ADAFTL
Sbjct: 3 QYHGTTILSVRRGNSVAMGGDGQVTLGNIVIKATARKVRRLYNGRILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+++ LLRS+VELAKDWR D+ LR LEAM+ +AD+ ++L+ITG GDVLEPE
Sbjct: 63 FERFEAKLDKHQGNLLRSAVELAKDWRSDRALRRLEAMLSVADREVSLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G++AIGSGGSYA SAARAL+ +T+ + +I K++ IA DIC+YTN N LE L+
Sbjct: 123 QGIVAIGSGGSYAQSAARALLENTELAPRDIVTKSLEIAGDICIYTNRNFTLEVLE 178
>gi|291619408|ref|YP_003522150.1| HslV [Pantoea ananatis LMG 20103]
gi|291154438|gb|ADD79022.1| HslV [Pantoea ananatis LMG 20103]
Length = 209
Score = 296 bits (759), Expect = 9e-79, Method: Composition-based stats.
Identities = 96/171 (56%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 35 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 94
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD++ +L+I+G GDV++PEN ++
Sbjct: 95 ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADESASLIISGNGDVIQPENDLI 154
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +++ A +I K+++IA DIC+YTNHN+ E L
Sbjct: 155 AIGSGGPYAQAAARALLENSELGARDIVEKSLNIAGDICIYTNHNVNFEEL 205
>gi|320539525|ref|ZP_08039192.1| peptidase component of the HslUV protease [Serratia symbiotica str.
Tucson]
gi|320030378|gb|EFW12390.1| peptidase component of the HslUV protease [Serratia symbiotica str.
Tucson]
Length = 199
Score = 296 bits (759), Expect = 9e-79, Method: Composition-based stats.
Identities = 98/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 25 TTIVSVRRHGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 84
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 85 EQKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADEHASLIITGNGDVIQPENDLI 144
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ +A EI K++ IA DIC+YTNH +E L
Sbjct: 145 AIGSGGPYAQAAARALLENTELNAREIVDKSLGIAGDICIYTNHFHTIEEL 195
>gi|163757485|ref|ZP_02164574.1| ATP-dependent protease peptidase subunit [Hoeflea phototrophica
DFL-43]
gi|162284987|gb|EDQ35269.1| ATP-dependent protease peptidase subunit [Hoeflea phototrophica
DFL-43]
Length = 186
Score = 296 bits (759), Expect = 9e-79, Method: Composition-based stats.
Identities = 135/186 (72%), Positives = 159/186 (85%), Gaps = 1/186 (0%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFA 62
M + + +MHATTI+TVRK VV+AGDGQVSLGQTVMK NARKVRR+GK N ++AGFA
Sbjct: 1 MSEHNPFGQMHATTIITVRKGNQVVMAGDGQVSLGQTVMKGNARKVRRIGKDNSVVAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTLLERLE KLEQYP+QL R++VELAKDWR D+YLR LEAM+L+ADKT+TL IT
Sbjct: 61 GATADAFTLLERLEAKLEQYPDQLTRAAVELAKDWRTDRYLRRLEAMMLVADKTVTLAIT 120
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
G GDVLEPE+G MAIGSGG+YA +AARALM SAEEIAR+AM IA DICVYTN NIV+
Sbjct: 121 GNGDVLEPEHGTMAIGSGGNYAYAAARALMDGDKSAEEIARRAMEIAGDICVYTNTNIVI 180
Query: 183 ETLKVG 188
ETL++
Sbjct: 181 ETLELD 186
>gi|121602221|ref|YP_989510.1| ATP-dependent protease peptidase subunit [Bartonella bacilliformis
KC583]
gi|120614398|gb|ABM44999.1| peptidase, T1 family [Bartonella bacilliformis KC583]
Length = 193
Score = 296 bits (759), Expect = 9e-79, Method: Composition-based stats.
Identities = 131/183 (71%), Positives = 155/183 (84%), Gaps = 1/183 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSS 65
+H +M+ TTI+TVRK VVIAGDGQVSLGQT+MK+NARKVRRLGK G +IAGFAG++
Sbjct: 3 EHKPDRMYGTTIITVRKGSKVVIAGDGQVSLGQTIMKSNARKVRRLGKDGTVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERL KLEQYPNQL+R+ VELAKDWR D+YLR LEAM+L+ADK TLV+TG+G
Sbjct: 63 ADAFTLLERLGMKLEQYPNQLMRACVELAKDWRTDRYLRRLEAMMLVADKKTTLVLTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEP++G+MAIGSGG++ALSAARALM AE IARKAM+IAA+ICVYTN N +ETL
Sbjct: 123 DVLEPKDGIMAIGSGGNFALSAARALMDMDLDAEAIARKAMNIAAEICVYTNDNFTIETL 182
Query: 186 KVG 188
Sbjct: 183 DTE 185
>gi|294011679|ref|YP_003545139.1| ATP-dependent HslUV protease peptidase subunit HslV [Sphingobium
japonicum UT26S]
gi|292675009|dbj|BAI96527.1| ATP-dependent HslUV protease peptidase subunit HslV [Sphingobium
japonicum UT26S]
Length = 188
Score = 296 bits (759), Expect = 9e-79, Method: Composition-based stats.
Identities = 116/176 (65%), Positives = 148/176 (84%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTI++VRK+G V++AGDGQVS+GQTVMK NARKVRRL G++I GFAG++ADAFTL
Sbjct: 12 WHGTTIMSVRKNGKVIVAGDGQVSMGQTVMKPNARKVRRLHDGSVIGGFAGATADAFTLF 71
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++ QL+R++VELAKDWR DKYLRNLEAM+++AD+ +TL++TG GDVLEP
Sbjct: 72 ERLEAKLERHNGQLMRAAVELAKDWRTDKYLRNLEAMMIVADREVTLILTGNGDVLEPVG 131
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
GV AIGSGG++AL+AARAL+ + AE +ARKAM +AADICVYTN +V+E L+
Sbjct: 132 GVAAIGSGGNFALAAARALVEYEEDAETLARKAMKVAADICVYTNDQLVVEELESA 187
>gi|85714081|ref|ZP_01045070.1| ATP-dependent protease peptidase subunit [Nitrobacter sp. Nb-311A]
gi|85699207|gb|EAQ37075.1| ATP-dependent protease peptidase subunit [Nitrobacter sp. Nb-311A]
Length = 177
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 124/173 (71%), Positives = 149/173 (86%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTILTVRK G VVI GDGQVS+GQTV+K+NA+KVRRLGKG++I GFAG++ADAFTL
Sbjct: 2 WHGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNAKKVRRLGKGDVIGGFAGATADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+L+ADK ++LV+TG GDVLEPE
Sbjct: 62 ERLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMLVADKDVSLVLTGTGDVLEPEA 121
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GVMAIGSGG+YAL+AARAL+ + N AE I R+++ IAADICVYTN N+ +E L
Sbjct: 122 GVMAIGSGGNYALAAARALIDSDNEAESIVRRSLDIAADICVYTNRNLTIEAL 174
>gi|254490706|ref|ZP_05103891.1| peptidase, T1 family [Methylophaga thiooxidans DMS010]
gi|224464162|gb|EEF80426.1| peptidase, T1 family [Methylophaga thiooxydans DMS010]
Length = 181
Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats.
Identities = 101/178 (56%), Positives = 134/178 (75%), Gaps = 1/178 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+ R++G VVI GDGQVSLG T+MK NARKVRRL G +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTILSYRRNGQVVIGGDGQVSLGNTIMKGNARKVRRLYHGKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L RS++ELAKDWR D+ +R LEA++ +AD+ +L+I+G GDV+EPE
Sbjct: 63 FERFEGKLEKHQGNLTRSALELAKDWRTDRMMRRLEALLAVADEEASLIISGNGDVIEPE 122
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
G+++IGSGG + +A L +T+ SA EI K ++IAADIC+YTNHN+ +ETL
Sbjct: 123 QGLISIGSGGPFAQAAATALLQNTELSAREIVEKGLNIAADICIYTNHNLTIETLDTN 180
>gi|163859117|ref|YP_001633415.1| ATP-dependent protease peptidase subunit [Bordetella petrii DSM
12804]
gi|229486309|sp|A9IH51|HSLV_BORPD RecName: Full=ATP-dependent protease subunit HslV
gi|163262845|emb|CAP45148.1| ATP-dependent protease heat shock protein [Bordetella petrii]
Length = 179
Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats.
Identities = 100/175 (57%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K ARK+RRL I+AGFAG++ADAFTL
Sbjct: 3 QFHATTIVCVRRGNKVALGGDGQVTLGNIVIKGTARKIRRLYHDKILAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+++AD TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGHLMRAAVELTRDWRTDRVLRRLEAMLIVADAEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA AL+ +T+ S ++I ++++ IA DIC+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELSPQDIVKQSLEIAGDICIYTNQNHVIETL 177
>gi|322834996|ref|YP_004215023.1| 20S proteasome A and B subunits [Rahnella sp. Y9602]
gi|321170197|gb|ADW75896.1| 20S proteasome A and B subunits [Rahnella sp. Y9602]
Length = 193
Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats.
Identities = 95/172 (55%), Positives = 131/172 (76%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 19 TTIVSVRRNGKVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 78
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+I+G GDV++PEN ++
Sbjct: 79 ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIISGNGDVIQPENDLI 138
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA +AARAL+ +++ A +I K++SIA DIC+YTN +E L
Sbjct: 139 AIGSGGPYAQAAARALLENSELEARDIVEKSLSIAGDICIYTNQFHTIEELS 190
>gi|13474179|ref|NP_105747.1| ATP-dependent protease peptidase subunit [Mesorhizobium loti
MAFF303099]
gi|21759196|sp|Q98CT8|HSLV_RHILO RecName: Full=ATP-dependent protease subunit HslV
gi|14024931|dbj|BAB51533.1| heat shock protein HslV, proteasome-related peptidase subunit
[Mesorhizobium loti MAFF303099]
Length = 177
Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats.
Identities = 135/177 (76%), Positives = 156/177 (88%), Gaps = 1/177 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSSADAFTL 71
MHATTI+TVRK VVIAGDGQVSLGQT+MK NARKVRR+GKG N+IAGFAG++ADAFTL
Sbjct: 1 MHATTIVTVRKGNKVVIAGDGQVSLGQTIMKGNARKVRRIGKGGNVIAGFAGATADAFTL 60
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LERLE KLEQYP+QL R+ VELAKDWR D+YLR LEAM+L+ADK+++L +TG GDVLEPE
Sbjct: 61 LERLEAKLEQYPDQLTRACVELAKDWRTDRYLRRLEAMMLVADKSVSLALTGTGDVLEPE 120
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+GVMAIGSGG+YAL+AARALM T AEEIARKAM IA+DICVYTN+N V+ETL
Sbjct: 121 HGVMAIGSGGNYALAAARALMDTDKDAEEIARKAMQIASDICVYTNNNFVVETLDAA 177
>gi|94496359|ref|ZP_01302936.1| ATP-dependent protease peptidase subunit [Sphingomonas sp. SKA58]
gi|94424105|gb|EAT09129.1| ATP-dependent protease peptidase subunit [Sphingomonas sp. SKA58]
Length = 180
Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats.
Identities = 120/174 (68%), Positives = 149/174 (85%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTI++VRK+G VV+AGDGQVS+GQTVMK NARKVRRL G++I GFAG++ADAFTL
Sbjct: 4 WHGTTIMSVRKNGKVVVAGDGQVSMGQTVMKPNARKVRRLHDGSVIGGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++ QL+R++VELAKDWR DKYLRNLEAM+++ADK +TL++TG GDVLEP N
Sbjct: 64 ERLEAKLERHNGQLMRAAVELAKDWRTDKYLRNLEAMMIVADKDVTLILTGNGDVLEPLN 123
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
GV AIGSGG++AL+AARALM + AE +ARKAM++AADICVYTN + +ETL
Sbjct: 124 GVAAIGSGGNFALAAARALMDYEQDAEALARKAMAVAADICVYTNDQLTIETLD 177
>gi|311693357|gb|ADP96230.1| ATP-dependent protease peptidase subunit [marine bacterium HP15]
Length = 176
Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats.
Identities = 109/175 (62%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR+D V + GDGQVSLG TVMK NARKVRRL G +IAGFAG +ADAFTL ER
Sbjct: 2 TTILSVRRDDEVAMGGDGQVSLGNTVMKGNARKVRRLYNGQVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L R++VELAKDWR D+ LR LEA++ +ADKT +L+ITG GDV+EPE G++
Sbjct: 62 EAQLEKHQGNLTRAAVELAKDWRTDRALRRLEALLAVADKTASLIITGNGDVIEPEQGLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AIGSGG +A ++ARAL+ +T SA EI K + IAADIC+YTNHN LE L D
Sbjct: 122 AIGSGGPFAQASARALLENTDLSAHEIVEKGLDIAADICIYTNHNRTLEVLSKND 176
>gi|296136674|ref|YP_003643916.1| 20S proteasome A and B subunits [Thiomonas intermedia K12]
gi|294340808|emb|CAZ89203.1| ATP-dependent protease hslV (Heat shock protein hslV) [Thiomonas
sp. 3As]
gi|295796796|gb|ADG31586.1| 20S proteasome A and B subunits [Thiomonas intermedia K12]
Length = 179
Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats.
Identities = 105/175 (60%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG V+K+ ARKVRRL I+AGFAG +ADAFTL
Sbjct: 3 QYHGTTILSVRRGATVALGGDGQVTLGNIVVKSTARKVRRLYNNQILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ QLLRS+VELAKDWR D+ LR LEAM+ +AD +L+ITG GDVLEPE
Sbjct: 63 FERFEAKLEKHQGQLLRSAVELAKDWRTDRMLRRLEAMLSVADAEHSLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG+YA SAARAL+ T S EI +++ IA DIC+YTN + +ETL
Sbjct: 123 YGIVAIGSGGAYAQSAARALLEHTALSPREIVAQSLKIAGDICIYTNQSHTIETL 177
>gi|254508193|ref|ZP_05120318.1| ATP-dependent protease HslV [Vibrio parahaemolyticus 16]
gi|219548915|gb|EED25915.1| ATP-dependent protease HslV [Vibrio parahaemolyticus 16]
Length = 181
Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats.
Identities = 101/176 (57%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL E+
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG++A +AA AL+ +T+ A EIA K++ IA DICV+TNH+ +E L++ E
Sbjct: 122 AIGSGGNFAQAAATALLENTELDAREIAEKSLKIAGDICVFTNHHHTIEELEIPAE 177
>gi|209545198|ref|YP_002277427.1| ATP-dependent protease peptidase subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532875|gb|ACI52812.1| 20S proteasome A and B subunits [Gluconacetobacter diazotrophicus
PAl 5]
Length = 199
Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats.
Identities = 118/189 (62%), Positives = 148/189 (78%), Gaps = 2/189 (1%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGF 61
+ +H + H TTIL VR+ V +AGDGQV+LG TV+K NARKVRR+G +I+AGF
Sbjct: 4 IHASQHDPIGWHGTTILCVRRGAQVAMAGDGQVTLGATVIKGNARKVRRIGPSNSILAGF 63
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AG++ADAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD+ + +
Sbjct: 64 AGATADAFTLLERLEAKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADQERSFTL 123
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNI 180
TG GDVLEPE+G++AIGSGG+YALSAARAL SA EIAR+AM IA +ICVYTNH++
Sbjct: 124 TGNGDVLEPEDGIIAIGSGGNYALSAARALADIDGLSAAEIARRAMRIAGEICVYTNHSV 183
Query: 181 VLETLKVGD 189
+LETL +
Sbjct: 184 ILETLGPDE 192
>gi|260779593|ref|ZP_05888483.1| ATP-dependent protease HslV [Vibrio coralliilyticus ATCC BAA-450]
gi|260604402|gb|EEX30706.1| ATP-dependent protease HslV [Vibrio coralliilyticus ATCC BAA-450]
Length = 181
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL E+
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG++A +AA AL+ +T+ A +IA K++ IA DICV+TNH+ +E L++ E
Sbjct: 122 AIGSGGNFAQAAATALLENTELDARDIAEKSLKIAGDICVFTNHHHTIEELEIPAE 177
>gi|260913428|ref|ZP_05919907.1| ATP-dependent protease HslV [Pasteurella dagmatis ATCC 43325]
gi|260632502|gb|EEX50674.1| ATP-dependent protease HslV [Pasteurella dagmatis ATCC 43325]
Length = 176
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 106/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-NGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE + +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEADQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++ALSAARAL+ +T SA EI K++ IA DICVYTN N +E L
Sbjct: 122 LAIGSGGNFALSAARALVENTDLSAREIVEKSLKIAGDICVYTNTNFTIEEL 173
>gi|157373024|ref|YP_001481013.1| ATP-dependent protease peptidase subunit [Serratia proteamaculans
568]
gi|166918423|sp|A8GL95|HSLV_SERP5 RecName: Full=ATP-dependent protease subunit HslV
gi|157324788|gb|ABV43885.1| 20S proteasome A and B subunits [Serratia proteamaculans 568]
Length = 176
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 98/171 (57%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENSSLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARA++ +T+ SA EI K+++IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARAMLENTELSAREIVDKSLNIAGDICIYTNHFHTIEEL 172
>gi|253991722|ref|YP_003043078.1| ATP-dependent protease peptidase subunit [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|211638497|emb|CAR67118.1| atp-dependent protease hslv (ec 3.4.25.-) (heat shock protein hslv)
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253783172|emb|CAQ86337.1| ATP-dependent protease [Photorhabdus asymbiotica]
Length = 176
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADENSSLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARA++ +T SA EIA KA++IA DIC+YTNHN E L
Sbjct: 122 AIGSGGPYAQAAARAMLENTNLSAREIAEKALTIAGDICIYTNHNHNFEEL 172
>gi|120553751|ref|YP_958102.1| ATP-dependent protease peptidase subunit [Marinobacter aquaeolei
VT8]
gi|166222985|sp|A1TYU6|HSLV_MARAV RecName: Full=ATP-dependent protease subunit HslV
gi|120323600|gb|ABM17915.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Marinobacter aquaeolei VT8]
Length = 176
Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats.
Identities = 108/175 (61%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ V + GDGQVSLG TVMK NARKVRRL G +IAGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRENEVAMGGDGQVSLGNTVMKGNARKVRRLYNGQVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L R++VELAKDWR D+ LR LEA++ +ADKT +L+ITG GDV+EPE G++
Sbjct: 62 EAQLEKHQGNLTRAAVELAKDWRTDRALRKLEALLAVADKTASLIITGNGDVIEPEQGLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AIGSGG +A +AARAL+ +T+ SA EIA KA+ IA DIC+YTN N LE L + D
Sbjct: 122 AIGSGGPFAQAAARALLENTELSAHEIAEKALEIAGDICIYTNQNRTLEVLPIKD 176
>gi|323498088|ref|ZP_08103092.1| ATP-dependent protease subunit HslV [Vibrio sinaloensis DSM 21326]
gi|323316799|gb|EGA69806.1| ATP-dependent protease subunit HslV [Vibrio sinaloensis DSM 21326]
Length = 180
Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats.
Identities = 99/174 (56%), Positives = 137/174 (78%), Gaps = 1/174 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL E+
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG++A +AA AL+ +T+ A +IA K++ IA DICV+TNH+ +E L++
Sbjct: 122 AIGSGGNFAQAAATALLENTELDARDIAEKSLKIAGDICVFTNHHHTIEELEIP 175
>gi|254285866|ref|ZP_04960828.1| protease HslVU, subunit HslV [Vibrio cholerae AM-19226]
gi|150424048|gb|EDN15987.1| protease HslVU, subunit HslV [Vibrio cholerae AM-19226]
Length = 185
Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats.
Identities = 102/175 (58%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AIGSGG+YA +AA AL+ +T+ A IA KA++IA DICV+TNH+ +E L++
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARTIAEKALNIAGDICVFTNHHHTIEELEIPQ 176
>gi|323494456|ref|ZP_08099562.1| ATP-dependent protease subunit HslV [Vibrio brasiliensis LMG 20546]
gi|323311279|gb|EGA64437.1| ATP-dependent protease subunit HslV [Vibrio brasiliensis LMG 20546]
Length = 181
Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL E+
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG++A +AA AL+ +T+ A EIA K++ IA DICV+TNH+ +E L++ +
Sbjct: 122 AIGSGGNFAQAAATALLENTELDAREIAEKSLKIAGDICVFTNHHHTIEELEIPAD 177
>gi|270265176|ref|ZP_06193438.1| ATP-dependent protease hslV [Serratia odorifera 4Rx13]
gi|270040810|gb|EFA13912.1| ATP-dependent protease hslV [Serratia odorifera 4Rx13]
Length = 176
Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats.
Identities = 98/171 (57%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADEHSSLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARA++ +T+ SA EI K+++IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARAMLENTELSAREIVDKSLNIAGDICIYTNHFHTIEEL 172
>gi|114319230|ref|YP_740913.1| ATP-dependent protease peptidase subunit [Alkalilimnicola ehrlichii
MLHE-1]
gi|122312756|sp|Q0ACL4|HSLV_ALHEH RecName: Full=ATP-dependent protease subunit HslV
gi|114225624|gb|ABI55423.1| HslV component of HslUV peptidase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 183
Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats.
Identities = 103/180 (57%), Positives = 134/180 (74%), Gaps = 1/180 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL R+DG VVI GDGQV+LG TVMK NARKVRRL G ++AGFAG +ADAFTL
Sbjct: 3 QFRGTTILAARRDGQVVIGGDGQVTLGHTVMKGNARKVRRLHNGRVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E +LE+Y L R++VE+AKDWR D+ LR LEA++++AD+ LVI+G GDV++PE
Sbjct: 63 FERFEGQLEKYRGNLTRAAVEMAKDWRSDRVLRRLEALLIVADREAMLVISGNGDVIDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
+ ++AIGSGG YA +AA ALM +Q SA E+ +A+ IA DIC+YTN N+ +E L E
Sbjct: 123 DDLVAIGSGGPYAQAAATALMRHSQLSARELVEQALGIAGDICIYTNRNLSIEELGPDSE 182
>gi|3114398|pdb|1NED|A Chain A, Crystal Structure Of Hslv (Clpq) At 3.8 Angstroms
Resolution
gi|3114399|pdb|1NED|B Chain B, Crystal Structure Of Hslv (Clpq) At 3.8 Angstroms
Resolution
gi|3114400|pdb|1NED|C Chain C, Crystal Structure Of Hslv (Clpq) At 3.8 Angstroms
Resolution
Length = 183
Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats.
Identities = 104/176 (59%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 1 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 60
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 61 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 120
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L E
Sbjct: 121 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEELSYKAE 176
>gi|89075185|ref|ZP_01161616.1| ATP-dependent protease peptidase subunit [Photobacterium sp. SKA34]
gi|90580883|ref|ZP_01236685.1| ATP-dependent protease peptidase subunit [Vibrio angustum S14]
gi|330447100|ref|ZP_08310750.1| ATP-dependent protease subunit HslV [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|89049007|gb|EAR54574.1| ATP-dependent protease peptidase subunit [Photobacterium sp. SKA34]
gi|90437954|gb|EAS63143.1| ATP-dependent protease peptidase subunit [Vibrio angustum S14]
gi|328491291|dbj|GAA05247.1| ATP-dependent protease subunit HslV [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 175
Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats.
Identities = 106/173 (61%), Positives = 139/173 (80%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + LL+S+VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEALLAVADETGSLIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG++A +AA AL+ +T A EIA KA++IA DICV+TNHN +E L+
Sbjct: 122 AIGSGGNFAQAAATALLENTDLGAREIAEKALNIAGDICVFTNHNHTIEELET 174
>gi|224826712|ref|ZP_03699812.1| 20S proteasome A and B subunits [Lutiella nitroferrum 2002]
gi|224600932|gb|EEG07115.1| 20S proteasome A and B subunits [Lutiella nitroferrum 2002]
Length = 178
Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats.
Identities = 103/176 (58%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI++VR+ V + GDGQV+LG V+KA ARKVRRL ++AGFAG +ADAFTL
Sbjct: 3 QFDGTTIVSVRRGQRVALGGDGQVTLGNIVIKATARKVRRLYHDKVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+RS+VELAKDWR D+ LR LEAM+++ADK TL+ITG GDVLEPE
Sbjct: 63 FERFEAKLEKHQGHLVRSAVELAKDWRTDRMLRRLEAMLIVADKESTLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAARAL +T+ + +K++ IA DIC+YTNHN ++ETL
Sbjct: 123 QGIAAIGSGGAYAQSAARALFENTELDPAVVVKKSLEIAGDICIYTNHNHLIETLD 178
>gi|145632761|ref|ZP_01788495.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
3655]
gi|145634508|ref|ZP_01790217.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittAA]
gi|319897988|ref|YP_004136185.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
F3031]
gi|144986956|gb|EDJ93508.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
3655]
gi|145268053|gb|EDK08048.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittAA]
gi|317433494|emb|CBY81877.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
F3031]
Length = 175
Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats.
Identities = 106/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-V 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAREIVEKSLKIAGDICVFTNTNFTIEEL 173
>gi|90022342|ref|YP_528169.1| ATP-dependent protease peptidase subunit [Saccharophagus degradans
2-40]
gi|122996025|sp|Q21H72|HSLV_SACD2 RecName: Full=ATP-dependent protease subunit HslV
gi|89951942|gb|ABD81957.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Saccharophagus degradans 2-40]
Length = 179
Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats.
Identities = 102/176 (57%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR+ VVI GDGQVSLG T+MK NA KVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTILSVRRGNKVVIGGDGQVSLGNTIMKGNACKVRRLYKNQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE + QL+R++VELAKDWR D+ LR LEA++ +A+K +L++TG GDV++PE
Sbjct: 63 FERFEAKLEAHDGQLVRAAVELAKDWRTDRALRRLEALLAVANKDASLIVTGNGDVIQPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N ++AIGSGG++A SAARAL+ +T+ A +I K++ IA D+CVYTNH+ +E L
Sbjct: 123 NDLIAIGSGGAFAQSAARALLENTELEARDIVEKSLGIAGDVCVYTNHHFTIEELS 178
>gi|56461558|ref|YP_156839.1| ATP-dependent protease peptidase subunit [Idiomarina loihiensis
L2TR]
gi|81599956|sp|Q5QV35|HSLV_IDILO RecName: Full=ATP-dependent protease subunit HslV
gi|56180568|gb|AAV83290.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Idiomarina
loihiensis L2TR]
Length = 185
Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats.
Identities = 104/170 (61%), Positives = 133/170 (78%), Gaps = 1/170 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VVI GDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGDKVVIGGDGQVSLGNTVMKGNARKVRRLYHDKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLEQ+ L+R++VELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PEN ++
Sbjct: 62 ESKLEQHQGNLMRAAVELAKDWRTDRALRRLEALLAVADKETSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
AIGSGG +A SAARAL+ +T +A +I +KA++IA DICVYTN N +E
Sbjct: 122 AIGSGGPFAQSAARALLENTDLNARDIVQKALTIAGDICVYTNGNQTIEE 171
>gi|120600431|ref|YP_965005.1| ATP-dependent protease peptidase subunit [Shewanella sp. W3-18-1]
gi|120560524|gb|ABM26451.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella sp. W3-18-1]
Length = 216
Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 44 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 103
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + LLRS+VELAKDWR D+ LR LEAM+++AD +L+ITG GDV++PE ++
Sbjct: 104 EAKLEMHQGHLLRSAVELAKDWRTDRMLRKLEAMLVVADAEASLIITGNGDVVQPEYDLV 163
Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+Y +A L +T+ SA EIA K+++IA DICV+TN +E L
Sbjct: 164 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAGDICVFTNQFKTIEEL 214
>gi|217969219|ref|YP_002354453.1| ATP-dependent protease peptidase subunit [Thauera sp. MZ1T]
gi|217506546|gb|ACK53557.1| 20S proteasome A and B subunits [Thauera sp. MZ1T]
Length = 178
Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats.
Identities = 105/176 (59%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR+ V + GDGQV+LG V+KA+ARKVR L G I+AGFAG +ADAFTL
Sbjct: 3 QYRGTTILSVRRGNRVALGGDGQVTLGNIVIKASARKVRTLYNGQILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+++ LLRS+VELAKDWR D+ LR LEAM+ +AD+ +LVITG GDVLEPE
Sbjct: 63 FERFEAKLDKHQGNLLRSAVELAKDWRTDRMLRRLEAMLAVADREHSLVITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G++AIGSGG+YA SAARAL+ +T+ EI KA+SIA D+C+YTNH+ +E L
Sbjct: 123 QGIVAIGSGGAYAQSAARALLENTELEPREIVSKALSIAGDLCIYTNHHHTIEVLD 178
>gi|15642670|ref|NP_232303.1| ATP-dependent protease peptidase subunit [Vibrio cholerae O1 biovar
El Tor str. N16961]
gi|121590905|ref|ZP_01678227.1| protease HslVU, subunit HslV [Vibrio cholerae 2740-80]
gi|121727582|ref|ZP_01680690.1| protease HslVU, subunit HslV [Vibrio cholerae V52]
gi|147674179|ref|YP_001218164.1| ATP-dependent protease peptidase subunit [Vibrio cholerae O395]
gi|153213965|ref|ZP_01949158.1| protease HslVU, subunit HslV [Vibrio cholerae 1587]
gi|153819928|ref|ZP_01972595.1| protease HslVU, subunit HslV [Vibrio cholerae NCTC 8457]
gi|153824209|ref|ZP_01976876.1| protease HslVU, subunit HslV [Vibrio cholerae B33]
gi|227082791|ref|YP_002811342.1| protease HslVU, subunit HslV [Vibrio cholerae M66-2]
gi|229507277|ref|ZP_04396782.1| ATP-dependent protease HslV [Vibrio cholerae BX 330286]
gi|229509800|ref|ZP_04399281.1| ATP-dependent protease HslV [Vibrio cholerae B33]
gi|229513595|ref|ZP_04403059.1| ATP-dependent protease HslV [Vibrio cholerae TMA 21]
gi|229516924|ref|ZP_04406370.1| ATP-dependent protease HslV [Vibrio cholerae RC9]
gi|229521740|ref|ZP_04411158.1| ATP-dependent protease HslV [Vibrio cholerae TM 11079-80]
gi|229606783|ref|YP_002877431.1| ATP-dependent protease peptidase subunit [Vibrio cholerae MJ-1236]
gi|254851212|ref|ZP_05240562.1| protease HslVU [Vibrio cholerae MO10]
gi|255744364|ref|ZP_05418316.1| ATP-dependent protease HslV [Vibrio cholera CIRS 101]
gi|262158526|ref|ZP_06029641.1| ATP-dependent protease HslV [Vibrio cholerae INDRE 91/1]
gi|297581512|ref|ZP_06943435.1| protease HslVU [Vibrio cholerae RC385]
gi|298500507|ref|ZP_07010311.1| protease HslVU [Vibrio cholerae MAK 757]
gi|11133074|sp|Q9KNQ6|HSLV_VIBCH RecName: Full=ATP-dependent protease subunit HslV
gi|172047533|sp|A5F4X4|HSLV_VIBC3 RecName: Full=ATP-dependent protease subunit HslV
gi|254765621|sp|C3LSA4|HSLV_VIBCM RecName: Full=ATP-dependent protease subunit HslV
gi|9657269|gb|AAF95816.1| protease HslVU, subunit HslV [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121547227|gb|EAX57351.1| protease HslVU, subunit HslV [Vibrio cholerae 2740-80]
gi|121630073|gb|EAX62478.1| protease HslVU, subunit HslV [Vibrio cholerae V52]
gi|124115535|gb|EAY34355.1| protease HslVU, subunit HslV [Vibrio cholerae 1587]
gi|126509526|gb|EAZ72120.1| protease HslVU, subunit HslV [Vibrio cholerae NCTC 8457]
gi|126518267|gb|EAZ75492.1| protease HslVU, subunit HslV [Vibrio cholerae B33]
gi|146316062|gb|ABQ20601.1| protease HslVU, subunit HslV [Vibrio cholerae O395]
gi|227010679|gb|ACP06891.1| protease HslVU, subunit HslV [Vibrio cholerae M66-2]
gi|227014563|gb|ACP10773.1| protease HslVU, subunit HslV [Vibrio cholerae O395]
gi|229341334|gb|EEO06338.1| ATP-dependent protease HslV [Vibrio cholerae TM 11079-80]
gi|229345987|gb|EEO10959.1| ATP-dependent protease HslV [Vibrio cholerae RC9]
gi|229349472|gb|EEO14428.1| ATP-dependent protease HslV [Vibrio cholerae TMA 21]
gi|229353274|gb|EEO18213.1| ATP-dependent protease HslV [Vibrio cholerae B33]
gi|229354782|gb|EEO19703.1| ATP-dependent protease HslV [Vibrio cholerae BX 330286]
gi|229369438|gb|ACQ59861.1| ATP-dependent protease HslV [Vibrio cholerae MJ-1236]
gi|254846917|gb|EET25331.1| protease HslVU [Vibrio cholerae MO10]
gi|255737889|gb|EET93282.1| ATP-dependent protease HslV [Vibrio cholera CIRS 101]
gi|262029687|gb|EEY48336.1| ATP-dependent protease HslV [Vibrio cholerae INDRE 91/1]
gi|297534350|gb|EFH73188.1| protease HslVU [Vibrio cholerae RC385]
gi|297540676|gb|EFH76733.1| protease HslVU [Vibrio cholerae MAK 757]
Length = 185
Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats.
Identities = 102/175 (58%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AIGSGG+YA +AA AL+ +T+ A IA KA++IA DICV+TNH+ +E L++
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARTIAEKALNIAGDICVFTNHHHTIEELEIPQ 176
>gi|148557270|ref|YP_001264852.1| ATP-dependent protease peptidase subunit [Sphingomonas wittichii
RW1]
gi|189036242|sp|A5VEJ8|HSLV_SPHWW RecName: Full=ATP-dependent protease subunit HslV
gi|148502460|gb|ABQ70714.1| 20S proteasome, A and B subunits [Sphingomonas wittichii RW1]
Length = 183
Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats.
Identities = 118/178 (66%), Positives = 148/178 (83%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
K H TTIL+VRK G VV+ GDGQVS+G TVMK NARKVR+LG G++I GFAG++ADAFT
Sbjct: 5 PKWHGTTILSVRKGGKVVVIGDGQVSMGNTVMKPNARKVRKLGDGSVIGGFAGATADAFT 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L +RLE+KLEQ+ QLLR++VELAKDWR DKYLRNLEAM+++AD+ +TL++TG GDVLEP
Sbjct: 65 LFDRLERKLEQHGGQLLRAAVELAKDWRTDKYLRNLEAMMIVADREVTLILTGNGDVLEP 124
Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
GV AIGSGG++ALSAARAL+ + AE I RKAM+IAAD+CV+TN ++ +ETL
Sbjct: 125 VGGVAAIGSGGNFALSAARALVDYEADAETICRKAMAIAADLCVFTNDSLTIETLDSA 182
>gi|319775581|ref|YP_004138069.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
F3047]
gi|317450172|emb|CBY86386.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
F3047]
Length = 175
Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats.
Identities = 106/172 (61%), Positives = 137/172 (79%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-V 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL +T+ SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALAENTELSAREIVEKSLKIAGDICVFTNTNFTIEEL 173
>gi|293391044|ref|ZP_06635378.1| ATP-dependent protease peptidase subunit [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951578|gb|EFE01697.1| ATP-dependent protease peptidase subunit [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 175
Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats.
Identities = 105/172 (61%), Positives = 137/172 (79%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGKVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-V 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T SA EI K++ IA +ICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTDLSAREIVEKSLKIAGEICVFTNTNFTIEEL 173
>gi|148977245|ref|ZP_01813872.1| ATP-dependent protease peptidase subunit [Vibrionales bacterium
SWAT-3]
gi|145963527|gb|EDK28790.1| ATP-dependent protease peptidase subunit [Vibrionales bacterium
SWAT-3]
Length = 182
Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats.
Identities = 99/172 (57%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKV RL ++AGFAG +ADAFTL E+
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVHRLYNDKVLAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A +AA AL+ +T A EIA K+++IA DICV+TNH+ +E L+
Sbjct: 122 AIGSGGNFAQAAATALLENTDLDAREIAEKSLNIAGDICVFTNHHHTVEELE 173
>gi|325577181|ref|ZP_08147665.1| ATP-dependent protease HslV [Haemophilus parainfluenzae ATCC 33392]
gi|301155382|emb|CBW14848.1| peptidase component of the HslUV protease [Haemophilus
parainfluenzae T3T1]
gi|325160763|gb|EGC72884.1| ATP-dependent protease HslV [Haemophilus parainfluenzae ATCC 33392]
Length = 176
Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats.
Identities = 105/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-NGV 134
E+KLE + LL+++VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE + +
Sbjct: 62 ERKLEMHQGHLLKAAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEADQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTDLSAREIVEKSLKIAGDICVFTNTNFTIEEL 173
>gi|261346863|ref|ZP_05974507.1| ATP-dependent protease HslVU, peptidase subunit [Providencia
rustigianii DSM 4541]
gi|282565043|gb|EFB70578.1| ATP-dependent protease HslVU, peptidase subunit [Providencia
rustigianii DSM 4541]
Length = 176
Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats.
Identities = 102/172 (59%), Positives = 133/172 (77%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADEHTSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA SAARAL+ +T SA+EIA KA+ IA DIC+YTNHN+ E +
Sbjct: 122 AIGSGGPYAQSAARALLENTDLSAKEIAEKALEIAGDICIYTNHNVNFEEIS 173
>gi|15603614|ref|NP_246688.1| ATP-dependent protease peptidase subunit [Pasteurella multocida
subsp. multocida str. Pm70]
gi|13431570|sp|P57969|HSLV_PASMU RecName: Full=ATP-dependent protease subunit HslV
gi|12722165|gb|AAK03833.1| HslV [Pasteurella multocida subsp. multocida str. Pm70]
Length = 176
Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats.
Identities = 105/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-NGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE + +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEADQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++ALSAARAL+ +T+ SA EI K++ IA DICVYTN + +E L
Sbjct: 122 LAIGSGGNFALSAARALVENTELSAREIVEKSLKIAGDICVYTNTHFTIEEL 173
>gi|261866863|ref|YP_003254785.1| ATP-dependent protease peptidase subunit [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412195|gb|ACX81566.1| ATP-dependent protease peptidase subunit [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 175
Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats.
Identities = 105/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGKVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-NGV 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE + +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPETDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T SA EI K++ IA +ICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTDLSAREIVEKSLKIAGEICVFTNTNFTIEEL 173
>gi|78484755|ref|YP_390680.1| ATP-dependent protease peptidase subunit [Thiomicrospira crunogena
XCL-2]
gi|123555943|sp|Q31IL7|HSLV_THICR RecName: Full=ATP-dependent protease subunit HslV
gi|78363041|gb|ABB41006.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
family T01B [Thiomicrospira crunogena XCL-2]
Length = 183
Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats.
Identities = 104/178 (58%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL +++G +VI GDGQV+LG VMK NARKVRRL G I+AGFAG++ADAFTL
Sbjct: 6 FHGTTILCAKRNGEMVIGGDGQVTLGHVVMKGNARKVRRLFNGKILAGFAGATADAFTLF 65
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KL+ + QL+R++VE+AKDWR D+ LR LEAM+L+AD L+I+G GDV+EP +
Sbjct: 66 ERFEGKLQTHNGQLMRAAVEMAKDWRTDRALRKLEAMMLVADADNMLLISGTGDVIEPAH 125
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
++IGSGGSYA SAA+ALM +T SA+++ KA++IAAD+C+YTNHN+ +E+L D
Sbjct: 126 DFISIGSGGSYAHSAAQALMENTDLSAKDVVEKALNIAADLCIYTNHNLTIESLNKED 183
>gi|327395731|dbj|BAK13153.1| ATP-dependent protease HslV HslV [Pantoea ananatis AJ13355]
Length = 195
Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats.
Identities = 96/171 (56%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 21 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 80
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD++ +L+I+G GDV++PEN ++
Sbjct: 81 ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADESASLIISGNGDVIQPENDLI 140
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +++ A +I K+++IA DIC+YTNHN+ E L
Sbjct: 141 AIGSGGPYAQAAARALLENSELGARDIVEKSLNIAGDICIYTNHNVNFEEL 191
>gi|197287030|ref|YP_002152902.1| ATP-dependent protease peptidase subunit [Proteus mirabilis HI4320]
gi|227354725|ref|ZP_03839143.1| T01 family HslV component of HslUV peptidase (ClpQ) [Proteus
mirabilis ATCC 29906]
gi|238065930|sp|B4F172|HSLV_PROMH RecName: Full=ATP-dependent protease subunit HslV
gi|194684517|emb|CAR46301.1| ATP-dependent protease HslV (heat shock protein) [Proteus mirabilis
HI4320]
gi|227165168|gb|EEI49996.1| T01 family HslV component of HslUV peptidase (ClpQ) [Proteus
mirabilis ATCC 29906]
Length = 176
Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats.
Identities = 101/175 (57%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETTSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AIGSGG YA +AARA++ +T SA EIA KA++IA DIC+YTNHN+ E + +
Sbjct: 122 AIGSGGPYAQAAARAMLENTDLSAREIAEKALNIAGDICIYTNHNVNFEEISSKE 176
>gi|315633392|ref|ZP_07888683.1| ATP-dependent protease HslV [Aggregatibacter segnis ATCC 33393]
gi|315477892|gb|EFU68633.1| ATP-dependent protease HslV [Aggregatibacter segnis ATCC 33393]
Length = 175
Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats.
Identities = 105/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGKVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-V 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA +ICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAREIVEKSLKIAGEICVFTNTNFTIEEL 173
>gi|291280523|ref|YP_003497358.1| ATP-dependent protease HslVU, peptidase subunit HslV [Deferribacter
desulfuricans SSM1]
gi|290755225|dbj|BAI81602.1| ATP-dependent protease HslVU, peptidase subunit HslV [Deferribacter
desulfuricans SSM1]
Length = 175
Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats.
Identities = 100/173 (57%), Positives = 133/173 (76%), Gaps = 1/173 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL V+KDG + + GDGQV+ G TV+K NA+KVR++ ++I GFAGS+ADAFTL+
Sbjct: 2 FKGTTILAVKKDGKIAVGGDGQVTFGHTVLKHNAKKVRKIYNDSVICGFAGSTADAFTLM 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER EKKL +Y QLLR++VELAKDWR DKYLR LEAM+++ADK ++TG GDV+EP N
Sbjct: 62 ERFEKKLNEYSGQLLRAAVELAKDWRTDKYLRRLEAMMIVADKNNIYILTGNGDVVEPNN 121
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
V AIGSGG YA +AA AL+ ++ +A+EI K++ IAA IC+YTN N+++E
Sbjct: 122 NVAAIGSGGPYAQAAATALVENSNLTAKEIVEKSLKIAASICIYTNDNLIVEE 174
>gi|183597346|ref|ZP_02958839.1| hypothetical protein PROSTU_00601 [Providencia stuartii ATCC 25827]
gi|188023371|gb|EDU61411.1| hypothetical protein PROSTU_00601 [Providencia stuartii ATCC 25827]
Length = 176
Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats.
Identities = 102/172 (59%), Positives = 134/172 (77%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADEHTSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA +AARAL+ +T+ SA EIA KA+SIA DIC+YTNHN+ E +
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALSIAGDICIYTNHNVNFEEIS 173
>gi|315122052|ref|YP_004062541.1| ATP-dependent protease peptidase subunit [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495454|gb|ADR52053.1| ATP-dependent protease peptidase subunit [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 189
Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats.
Identities = 155/188 (82%), Positives = 171/188 (90%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M + + + VKMHATTILTVRK G+VVIA DGQVS+G TVMK NARKVRRLGKGNIIAG
Sbjct: 1 MSAIVEGNSFVKMHATTILTVRKGGIVVIASDGQVSVGNTVMKGNARKVRRLGKGNIIAG 60
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
FAGSSADAFTL+E+LEKKLEQYP QLLR+SVEL KDWR DKYLRNLEAMIL+ADKT+TLV
Sbjct: 61 FAGSSADAFTLVEKLEKKLEQYPGQLLRASVELTKDWRADKYLRNLEAMILVADKTVTLV 120
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
ITG GDVLEPE+GVMAIGSGGSYAL+AARALM+TQ SAEEIAR+AMSIAADICVYTNH I
Sbjct: 121 ITGAGDVLEPEHGVMAIGSGGSYALAAARALMNTQKSAEEIAREAMSIAADICVYTNHEI 180
Query: 181 VLETLKVG 188
+LETL+V
Sbjct: 181 ILETLEVE 188
>gi|109900489|ref|YP_663744.1| ATP-dependent protease peptidase subunit [Pseudoalteromonas
atlantica T6c]
gi|123064030|sp|Q15N48|HSLV_PSEA6 RecName: Full=ATP-dependent protease subunit HslV
gi|109702770|gb|ABG42690.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Pseudoalteromonas atlantica T6c]
Length = 174
Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats.
Identities = 103/172 (59%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGNQVVIAGDGQVSLGNTVMKGNAKKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L R++VELAKDWR D+ LR LEA++ +AD+T + +ITG GDV++PEN ++
Sbjct: 62 ESKLEIHQGNLTRAAVELAKDWRTDRMLRKLEALLAVADETASFIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG +A +AA AL+ +T+ SAEEIA KA++IA +ICV+TNHN +E +
Sbjct: 122 AIGSGGPFAQAAASALLDNTELSAEEIAEKALTIAGNICVFTNHNHTVEKID 173
>gi|163797094|ref|ZP_02191049.1| 20S proteasome, A and B subunits [alpha proteobacterium BAL199]
gi|159177610|gb|EDP62163.1| 20S proteasome, A and B subunits [alpha proteobacterium BAL199]
Length = 186
Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats.
Identities = 115/186 (61%), Positives = 148/186 (79%), Gaps = 1/186 (0%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M D +++ H TTIL+VRKDG VV+AGDGQV+ G TVMKA ARKVRRL G +IAG
Sbjct: 1 MTDSSDNRHSMTWHGTTILSVRKDGRVVVAGDGQVTFGNTVMKAGARKVRRLAGGQVIAG 60
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
FAG++ADAFTL ERLE KLEQ+P+QL+R+ VELAKDWR D+YLR LEAM+ + D ++L+
Sbjct: 61 FAGATADAFTLFERLEAKLEQHPDQLMRACVELAKDWRTDRYLRRLEAMMAVVDPDVSLI 120
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHN 179
++G GDVLEPE+G++ IGSGG++ALSAARAL AE IAR++M+IAA+IC+YTN
Sbjct: 121 LSGTGDVLEPEDGLIGIGSGGAFALSAARALADRPDMDAEAIARRSMAIAAEICIYTNDR 180
Query: 180 IVLETL 185
+ LE+L
Sbjct: 181 VTLESL 186
>gi|187476658|ref|YP_784681.1| ATP-dependent protease peptidase subunit [Bordetella avium 197N]
gi|123515064|sp|Q2L1C6|HSLV_BORA1 RecName: Full=ATP-dependent protease subunit HslV
gi|115421244|emb|CAJ47749.1| ATP-dependent protease heat shock protein [Bordetella avium 197N]
Length = 179
Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats.
Identities = 98/175 (56%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K ARK+RRL ++AGFAG++ADAFTL
Sbjct: 3 QFHATTIVCVRRGNRVALGGDGQVTLGNIVIKGTARKIRRLYHDKVLAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+++AD TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGHLMRAAVELTRDWRTDRVLRRLEAMLIVADAEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA AL+ +T+ E I ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELPPETIVKQSLEIAGDLCIYTNQNHVIETL 177
>gi|145630325|ref|ZP_01786106.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
R3021]
gi|148827691|ref|YP_001292444.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittGG]
gi|229844344|ref|ZP_04464484.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
6P18H1]
gi|166222979|sp|A5UH05|HSLV_HAEIG RecName: Full=ATP-dependent protease subunit HslV
gi|144984060|gb|EDJ91497.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
R3021]
gi|148718933|gb|ABR00061.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittGG]
gi|229812593|gb|EEP48282.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
6P18H1]
Length = 175
Score = 294 bits (753), Expect = 5e-78, Method: Composition-based stats.
Identities = 106/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-V 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAREIVEKSLRIAGDICVFTNTNFTIEEL 173
>gi|54307475|ref|YP_128495.1| ATP-dependent protease peptidase subunit [Photobacterium profundum
SS9]
gi|90413624|ref|ZP_01221614.1| ATP-dependent protease peptidase subunit [Photobacterium profundum
3TCK]
gi|62288342|sp|Q6LVI2|HSLV_PHOPR RecName: Full=ATP-dependent protease subunit HslV
gi|46911895|emb|CAG18693.1| putative protease HslVU, subunit HslV [Photobacterium profundum
SS9]
gi|90325397|gb|EAS41886.1| ATP-dependent protease peptidase subunit [Photobacterium profundum
3TCK]
Length = 175
Score = 294 bits (753), Expect = 5e-78, Method: Composition-based stats.
Identities = 106/173 (61%), Positives = 139/173 (80%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + LL+S+VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAILAVADETGSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG++A +AA AL+ +T A EIA K+++IA DICV+TNHN +E L+
Sbjct: 122 AIGSGGNFAQAAATALLENTDLGAREIAEKSLNIAGDICVFTNHNHTIEELET 174
>gi|251793770|ref|YP_003008500.1| ATP-dependent protease peptidase subunit [Aggregatibacter
aphrophilus NJ8700]
gi|247535167|gb|ACS98413.1| ATP-dependent protease HslV [Aggregatibacter aphrophilus NJ8700]
Length = 174
Score = 294 bits (753), Expect = 5e-78, Method: Composition-based stats.
Identities = 105/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGKVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-V 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA +ICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAREIVEKSLKIAGEICVFTNTNFTIEEL 173
>gi|319780229|ref|YP_004139705.1| 20S proteasome A and subunit betas [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166117|gb|ADV09655.1| 20S proteasome A and B subunits [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 183
Score = 293 bits (752), Expect = 5e-78, Method: Composition-based stats.
Identities = 133/179 (74%), Positives = 156/179 (87%), Gaps = 1/179 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSSADAF 69
+ MHATTI+TVRK VVIAGDGQVSLGQT+MK NA+KVRR+GKG N+IAGFAG++ADAF
Sbjct: 5 LTMHATTIVTVRKGNKVVIAGDGQVSLGQTIMKGNAKKVRRIGKGGNVIAGFAGATADAF 64
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TLLERLE KLEQYP+QL R+ VELAKDWR D+YLR LEAM+L+ADK+++L +TG GDVLE
Sbjct: 65 TLLERLEAKLEQYPDQLTRACVELAKDWRTDRYLRRLEAMMLVADKSVSLALTGTGDVLE 124
Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
PE GVMAIGSGG+YAL+AARALM + AEEIARKAM IA+DICVYTN+N V+ETL
Sbjct: 125 PEFGVMAIGSGGNYALAAARALMDSDKDAEEIARKAMQIASDICVYTNNNFVVETLDAA 183
>gi|218528689|ref|YP_002419505.1| ATP-dependent protease peptidase subunit [Methylobacterium
chloromethanicum CM4]
gi|254802418|sp|B7KZ47|HSLV_METC4 RecName: Full=ATP-dependent protease subunit HslV
gi|218520992|gb|ACK81577.1| 20S proteasome A and B subunits [Methylobacterium chloromethanicum
CM4]
Length = 186
Score = 293 bits (752), Expect = 5e-78, Method: Composition-based stats.
Identities = 124/178 (69%), Positives = 145/178 (81%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++ADAFT
Sbjct: 9 PQMHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGAVIGGFAGATADAFT 68
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+ADK + L+++G GDVLEP
Sbjct: 69 LFERLEAKLEQYPGQLSRACVELTKDWRTDRYLRRLEAMMLVADKEVGLLLSGAGDVLEP 128
Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
E GVMAIGSGG+YALSAARAL + AE I R++M IAA+ICVYTN N+V+ETL
Sbjct: 129 ETGVMAIGSGGNYALSAARALEDGELDAEAIVRRSMKIAAEICVYTNGNLVIETLDAA 186
>gi|319408003|emb|CBI81657.1| heat shock protein [Bartonella schoenbuchensis R1]
Length = 186
Score = 293 bits (752), Expect = 5e-78, Method: Composition-based stats.
Identities = 129/183 (70%), Positives = 156/183 (85%), Gaps = 1/183 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSS 65
+H + +M+ TTI+TVRK VV+AGDGQVSLGQT+MK NARKVRRLGKG +IAGFAG++
Sbjct: 3 EHKSDRMYGTTIVTVRKGDKVVMAGDGQVSLGQTIMKGNARKVRRLGKGGTVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK +TL +TG+G
Sbjct: 63 ADAFTLLERLEIKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKVTLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+G+MAIGSGG++ALSAARAL+ T A+ IA KAMSIAA+ICVYTN N +ETL
Sbjct: 123 DVLEPEDGIMAIGSGGNFALSAARALIDTDLDAKAIACKAMSIAAEICVYTNGNFTIETL 182
Query: 186 KVG 188
Sbjct: 183 DTE 185
>gi|212712510|ref|ZP_03320638.1| hypothetical protein PROVALCAL_03605 [Providencia alcalifaciens DSM
30120]
gi|212684726|gb|EEB44254.1| hypothetical protein PROVALCAL_03605 [Providencia alcalifaciens DSM
30120]
Length = 176
Score = 293 bits (752), Expect = 5e-78, Method: Composition-based stats.
Identities = 102/172 (59%), Positives = 133/172 (77%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADEHTSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA SAARAL+ +T SA EIA KA++IA DIC+YTNHN+ E +
Sbjct: 122 AIGSGGPYAQSAARALLENTDLSAREIAEKALAIAGDICIYTNHNVNFEEIS 173
>gi|220925309|ref|YP_002500611.1| ATP-dependent protease peptidase subunit [Methylobacterium nodulans
ORS 2060]
gi|219949916|gb|ACL60308.1| 20S proteasome A and B subunits [Methylobacterium nodulans ORS
2060]
Length = 176
Score = 293 bits (752), Expect = 5e-78, Method: Composition-based stats.
Identities = 119/176 (67%), Positives = 146/176 (82%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++ADAFTL
Sbjct: 1 MHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGAVIGGFAGATADAFTLF 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+AD+ ++L+++G GDVLEPE
Sbjct: 61 ERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADREVSLMLSGSGDVLEPEG 120
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
G+MAIGSGG+YAL+AARAL AE I R++++IAA+ICVYTN N+V+E+L+
Sbjct: 121 GIMAIGSGGNYALAAARALEDQDLDAESIVRRSLAIAAEICVYTNGNLVIESLEAA 176
>gi|238789598|ref|ZP_04633382.1| ATP-dependent protease hslV [Yersinia frederiksenii ATCC 33641]
gi|238722351|gb|EEQ14007.1| ATP-dependent protease hslV [Yersinia frederiksenii ATCC 33641]
Length = 174
Score = 293 bits (752), Expect = 6e-78, Method: Composition-based stats.
Identities = 100/171 (58%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTELDARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|33594895|ref|NP_882538.1| ATP-dependent protease peptidase subunit [Bordetella parapertussis
12822]
gi|33599170|ref|NP_886730.1| ATP-dependent protease peptidase subunit [Bordetella bronchiseptica
RB50]
gi|47605656|sp|Q7W215|HSLV_BORPA RecName: Full=ATP-dependent protease subunit HslV
gi|47605659|sp|Q7WQZ3|HSLV_BORBR RecName: Full=ATP-dependent protease subunit HslV
gi|33564971|emb|CAE39918.1| ATP-dependent protease heat shock protein [Bordetella
parapertussis]
gi|33575216|emb|CAE30679.1| ATP-dependent protease heat shock protein [Bordetella
bronchiseptica RB50]
Length = 179
Score = 293 bits (752), Expect = 6e-78, Method: Composition-based stats.
Identities = 98/175 (56%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K ARK+RRL ++AGFAG++ADAFTL
Sbjct: 3 QFHATTIVCVRRGNHVALGGDGQVTLGNIVIKGTARKIRRLYHDKVLAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+++AD TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGHLMRAAVELTRDWRTDRVLRRLEAMLIVADTEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA AL+ +T+ E I ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELPPEAIVKQSLEIAGDLCIYTNQNHVIETL 177
>gi|153803695|ref|ZP_01958281.1| protease HslVU, subunit HslV [Vibrio cholerae MZO-3]
gi|124120772|gb|EAY39515.1| protease HslVU, subunit HslV [Vibrio cholerae MZO-3]
Length = 185
Score = 293 bits (752), Expect = 6e-78, Method: Composition-based stats.
Identities = 102/175 (58%), Positives = 136/175 (77%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEQDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AIGSGG+YA +AA AL+ +T+ A IA KA++IA DICV+TNH+ +E L++
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARTIAEKALNIAGDICVFTNHHHTIEELEIPQ 176
>gi|11513631|pdb|1E94|A Chain A, Hslv-Hslu From E.Coli
gi|11513632|pdb|1E94|B Chain B, Hslv-Hslu From E.Coli
gi|11513633|pdb|1E94|C Chain C, Hslv-Hslu From E.Coli
gi|11513634|pdb|1E94|D Chain D, Hslv-Hslu From E.Coli
gi|13399753|pdb|1G4A|B Chain B, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|13399754|pdb|1G4A|A Chain A, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|13399755|pdb|1G4A|D Chain D, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|13399756|pdb|1G4A|C Chain C, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|13399761|pdb|1G4B|M Chain M, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|13399762|pdb|1G4B|N Chain N, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|13399763|pdb|1G4B|O Chain O, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|13399764|pdb|1G4B|P Chain P, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
Reveal An Atp-Dependent Proteolysis Mechanism
gi|17942583|pdb|1HT2|A Chain A, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942584|pdb|1HT2|B Chain B, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942587|pdb|1HT2|C Chain C, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942588|pdb|1HT2|D Chain D, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942589|pdb|1HT2|I Chain I, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942590|pdb|1HT2|J Chain J, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942593|pdb|1HT2|K Chain K, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942594|pdb|1HT2|L Chain L, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942595|pdb|1HT1|C Chain C, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942596|pdb|1HT1|D Chain D, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942597|pdb|1HT1|V Chain V, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942598|pdb|1HT1|X Chain X, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942599|pdb|1HT1|A Chain A, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942600|pdb|1HT1|B Chain B, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942601|pdb|1HT1|Z Chain Z, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942602|pdb|1HT1|Y Chain Y, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942607|pdb|1HQY|A Chain A, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942608|pdb|1HQY|B Chain B, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942609|pdb|1HQY|C Chain C, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
gi|17942610|pdb|1HQY|D Chain D, Nucleotide-Dependent Conformational Changes In A Protease-
Associated Atpase Hslu
Length = 175
Score = 293 bits (752), Expect = 6e-78, Method: Composition-based stats.
Identities = 103/172 (59%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 1 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 60
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 61 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 120
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEELS 172
>gi|262273449|ref|ZP_06051263.1| ATP-dependent protease HslV [Grimontia hollisae CIP 101886]
gi|262222427|gb|EEY73738.1| ATP-dependent protease HslV [Grimontia hollisae CIP 101886]
Length = 174
Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats.
Identities = 101/172 (58%), Positives = 137/172 (79%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRALRRLEALLAVADETASLIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A +AA AL+ +T+ A EIA K+++IA DICV+TN + +E L
Sbjct: 122 AIGSGGNFAQAAAIALLENTELDAREIAEKSLTIAGDICVFTNQHHTIEELD 173
>gi|257095383|ref|YP_003169024.1| ATP-dependent protease peptidase subunit [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047907|gb|ACV37095.1| 20S proteasome A and B subunits [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 179
Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats.
Identities = 99/176 (56%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG V+KA+ARKVRR+ +G I+AGFAG +ADAFTL
Sbjct: 3 QYHGTTILSVRRGSRVAMGGDGQVTLGNLVIKASARKVRRIHQGRILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+++ LLRS+VELAKDWR D+ LR LEAM+ +AD+ +L+ITG GDV+EPE
Sbjct: 63 FERFEAKLDKHQGNLLRSAVELAKDWRSDRALRRLEAMLAVADRDNSLIITGNGDVVEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG++A SAARAL+ +++ E+ RK++ IA+++C+YTN N +E L+
Sbjct: 123 HGIVAIGSGGAFAQSAARALVENSELDPAEVVRKSLQIASELCIYTNQNFTIEVLE 178
>gi|146313673|ref|YP_001178747.1| ATP-dependent protease peptidase subunit [Enterobacter sp. 638]
gi|166918422|sp|A4WG66|HSLV_ENT38 RecName: Full=ATP-dependent protease subunit HslV
gi|145320549|gb|ABP62696.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Enterobacter sp. 638]
Length = 176
Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALGIAGDICIYTNHFHTIEEL 172
>gi|240849873|ref|YP_002971261.1| heat shock protein HslV [Bartonella grahamii as4aup]
gi|240266996|gb|ACS50584.1| heat shock protein HslV [Bartonella grahamii as4aup]
Length = 193
Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats.
Identities = 130/183 (71%), Positives = 153/183 (83%), Gaps = 1/183 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSS 65
+H M+ TTI+TVRK G VV+AGDGQVSLGQT+MK NARKVRRLG G +IAGFAG++
Sbjct: 3 EHKPDIMYGTTIITVRKGGKVVMAGDGQVSLGQTIMKGNARKVRRLGKNGVVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK +TL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKVTLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GVMAIGSGG++ALSAARALM AE IARKAM+IAA ICVYTN + +ETL
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARALMDLDLDAETIARKAMAIAAKICVYTNDHFTIETL 182
Query: 186 KVG 188
Sbjct: 183 DAE 185
>gi|153825157|ref|ZP_01977824.1| protease HslVU, subunit HslV [Vibrio cholerae MZO-2]
gi|153829486|ref|ZP_01982153.1| protease HslVU, subunit HslV [Vibrio cholerae 623-39]
gi|229524653|ref|ZP_04414058.1| ATP-dependent protease HslV [Vibrio cholerae bv. albensis VL426]
gi|229527400|ref|ZP_04416792.1| ATP-dependent protease HslV [Vibrio cholerae 12129(1)]
gi|148875069|gb|EDL73204.1| protease HslVU, subunit HslV [Vibrio cholerae 623-39]
gi|149741303|gb|EDM55345.1| protease HslVU, subunit HslV [Vibrio cholerae MZO-2]
gi|229335032|gb|EEO00517.1| ATP-dependent protease HslV [Vibrio cholerae 12129(1)]
gi|229338234|gb|EEO03251.1| ATP-dependent protease HslV [Vibrio cholerae bv. albensis VL426]
gi|327485148|gb|AEA79555.1| ATP-dependent protease HslV [Vibrio cholerae LMA3894-4]
Length = 185
Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats.
Identities = 102/175 (58%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AIGSGG+YA +AA AL+ +T+ A IA KA++IA DICV+TNH+ +E L++
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARMIAEKALNIAGDICVFTNHHHTIEELEIPQ 176
>gi|152981232|ref|YP_001354903.1| ATP-dependent protease peptidase subunit [Janthinobacterium sp.
Marseille]
gi|166222981|sp|A6T306|HSLV_JANMA RecName: Full=ATP-dependent protease subunit HslV
gi|151281309|gb|ABR89719.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Janthinobacterium sp. Marseille]
Length = 178
Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats.
Identities = 102/176 (57%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ +V + GDGQV+LG VMK ARKVR++ G ++ GFAG +ADAFTL
Sbjct: 3 QFHGTTILSVRRGNIVALGGDGQVTLGNIVMKGTARKVRKVYNGKVLVGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LER E KLE++ L+R+SVELAKDWR D+ LR LEAM+L+ADK TL+ITG GDVLEP
Sbjct: 63 LERFESKLEKHQGHLMRASVELAKDWRTDRMLRRLEAMLLVADKETTLIITGNGDVLEPN 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G+ AIGSGG+YA SAA+AL +T S E+I +K+++IA ++C+YTN + ++ETL
Sbjct: 123 DGIGAIGSGGTYAQSAAKALQENTDLSPEDIVKKSLTIAGELCIYTNLSHIIETLD 178
>gi|317494768|ref|ZP_07953180.1| proteasome A-type and B-type [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917370|gb|EFV38717.1| proteasome A-type and B-type [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 189
Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats.
Identities = 98/172 (56%), Positives = 131/172 (76%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 15 TTIVSVRRNGKVVIGGDGQATMGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELF 74
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 75 ERKLELHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 134
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA +A+RAL+ +T+ SA EI KA+ IA DIC+YTN +E L
Sbjct: 135 AIGSGGPYAQAASRALLENTELSAREIVDKALGIAGDICIYTNQFHTIEELD 186
>gi|238764480|ref|ZP_04625428.1| ATP-dependent protease hslV [Yersinia kristensenii ATCC 33638]
gi|238697292|gb|EEP90061.1| ATP-dependent protease hslV [Yersinia kristensenii ATCC 33638]
Length = 182
Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL N+IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYHDNVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +ADKT +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADKTASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|15804523|ref|NP_290563.1| ATP-dependent protease peptidase subunit [Escherichia coli O157:H7
EDL933]
gi|15834113|ref|NP_312886.1| ATP-dependent protease peptidase subunit [Escherichia coli O157:H7
str. Sakai]
gi|16131770|ref|NP_418367.1| peptidase component of the HslUV protease [Escherichia coli str.
K-12 substr. MG1655]
gi|24115226|ref|NP_709736.1| ATP-dependent protease peptidase subunit [Shigella flexneri 2a str.
301]
gi|26250699|ref|NP_756739.1| ATP-dependent protease peptidase subunit [Escherichia coli CFT073]
gi|30064775|ref|NP_838946.1| ATP-dependent protease peptidase subunit [Shigella flexneri 2a str.
2457T]
gi|74314432|ref|YP_312851.1| ATP-dependent protease peptidase subunit [Shigella sonnei Ss046]
gi|82546281|ref|YP_410228.1| ATP-dependent protease peptidase subunit [Shigella boydii Sb227]
gi|82778892|ref|YP_405241.1| ATP-dependent protease peptidase subunit [Shigella dysenteriae
Sd197]
gi|89110097|ref|AP_003877.1| peptidase component of the HslUV protease [Escherichia coli str.
K-12 substr. W3110]
gi|110644268|ref|YP_671998.1| ATP-dependent protease peptidase subunit [Escherichia coli 536]
gi|110807793|ref|YP_691313.1| ATP-dependent protease peptidase subunit [Shigella flexneri 5 str.
8401]
gi|157159294|ref|YP_001465426.1| ATP-dependent protease peptidase subunit [Escherichia coli E24377A]
gi|157163407|ref|YP_001460725.1| ATP-dependent protease peptidase subunit [Escherichia coli HS]
gi|168748768|ref|ZP_02773790.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4113]
gi|168755618|ref|ZP_02780625.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4401]
gi|168761682|ref|ZP_02786689.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4501]
gi|168768236|ref|ZP_02793243.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4486]
gi|168775230|ref|ZP_02800237.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4196]
gi|168780851|ref|ZP_02805858.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4076]
gi|168786790|ref|ZP_02811797.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC869]
gi|168799485|ref|ZP_02824492.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC508]
gi|170022057|ref|YP_001727011.1| ATP-dependent protease peptidase subunit [Escherichia coli ATCC
8739]
gi|170083402|ref|YP_001732722.1| peptidase component of the HslUV protease [Escherichia coli str.
K-12 substr. DH10B]
gi|170680847|ref|YP_001746319.1| ATP-dependent protease peptidase subunit [Escherichia coli SMS-3-5]
gi|170769655|ref|ZP_02904108.1| ATP-dependent protease HslV [Escherichia albertii TW07627]
gi|187733880|ref|YP_001882627.1| ATP-dependent protease peptidase subunit [Shigella boydii CDC
3083-94]
gi|188494807|ref|ZP_03002077.1| ATP-dependent protease HslV [Escherichia coli 53638]
gi|191166450|ref|ZP_03028281.1| ATP-dependent protease HslV [Escherichia coli B7A]
gi|191172702|ref|ZP_03034240.1| ATP-dependent protease HslV [Escherichia coli F11]
gi|193063996|ref|ZP_03045082.1| ATP-dependent protease HslV [Escherichia coli E22]
gi|193067977|ref|ZP_03048942.1| ATP-dependent protease HslV [Escherichia coli E110019]
gi|194427454|ref|ZP_03060003.1| ATP-dependent protease HslV [Escherichia coli B171]
gi|194433271|ref|ZP_03065552.1| ATP-dependent protease HslV [Shigella dysenteriae 1012]
gi|194438354|ref|ZP_03070445.1| ATP-dependent protease HslV [Escherichia coli 101-1]
gi|195937576|ref|ZP_03082958.1| ATP-dependent protease peptidase subunit [Escherichia coli O157:H7
str. EC4024]
gi|208809711|ref|ZP_03252048.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4206]
gi|208813249|ref|ZP_03254578.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4045]
gi|208819868|ref|ZP_03260188.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4042]
gi|209399609|ref|YP_002273452.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4115]
gi|209921412|ref|YP_002295496.1| ATP-dependent protease peptidase subunit [Escherichia coli SE11]
gi|215489263|ref|YP_002331694.1| ATP-dependent protease peptidase subunit [Escherichia coli O127:H6
str. E2348/69]
gi|217326046|ref|ZP_03442130.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. TW14588]
gi|218551084|ref|YP_002384875.1| ATP-dependent protease peptidase subunit [Escherichia fergusonii
ATCC 35469]
gi|218556494|ref|YP_002389408.1| ATP-dependent protease peptidase subunit [Escherichia coli IAI1]
gi|218697646|ref|YP_002405313.1| ATP-dependent protease peptidase subunit [Escherichia coli 55989]
gi|218701363|ref|YP_002408992.1| ATP-dependent protease peptidase subunit [Escherichia coli IAI39]
gi|218707558|ref|YP_002415077.1| ATP-dependent protease peptidase subunit [Escherichia coli UMN026]
gi|238902998|ref|YP_002928794.1| peptidase component of the HslUV protease [Escherichia coli BW2952]
gi|253775429|ref|YP_003038260.1| ATP-dependent protease peptidase subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254039193|ref|ZP_04873243.1| ATP-dependent protease hslV [Escherichia sp. 1_1_43]
gi|254163882|ref|YP_003046990.1| ATP-dependent protease peptidase subunit [Escherichia coli B str.
REL606]
gi|254795934|ref|YP_003080771.1| ATP-dependent protease peptidase subunit [Escherichia coli O157:H7
str. TW14359]
gi|256021577|ref|ZP_05435442.1| ATP-dependent protease peptidase subunit [Shigella sp. D9]
gi|256026030|ref|ZP_05439895.1| ATP-dependent protease peptidase subunit [Escherichia sp. 4_1_40B]
gi|260846648|ref|YP_003224426.1| peptidase component HslV of the HslUV protease [Escherichia coli
O103:H2 str. 12009]
gi|260857667|ref|YP_003231558.1| peptidase component HslV of the HslUV protease [Escherichia coli
O26:H11 str. 11368]
gi|260870651|ref|YP_003237053.1| peptidase component HslV of the HslUV protease [Escherichia coli
O111:H- str. 11128]
gi|261223566|ref|ZP_05937847.1| peptidase component of the HslUV protease [Escherichia coli O157:H7
str. FRIK2000]
gi|261257328|ref|ZP_05949861.1| peptidase component HslV of the HslUV protease [Escherichia coli
O157:H7 str. FRIK966]
gi|291285347|ref|YP_003502165.1| ATP-dependent protease hslV [Escherichia coli O55:H7 str. CB9615]
gi|293407552|ref|ZP_06651471.1| ATP-dependent protease peptidase subunit [Escherichia coli
FVEC1412]
gi|293413372|ref|ZP_06656033.1| conserved hypothetical protein [Escherichia coli B354]
gi|293417437|ref|ZP_06660061.1| ATP-dependent protease hslV [Escherichia coli B185]
gi|293470245|ref|ZP_06664656.1| ATP-dependent protease hslV [Escherichia coli B088]
gi|298383300|ref|ZP_06992893.1| ATP-dependent protease hslV [Escherichia coli FVEC1302]
gi|301024061|ref|ZP_07187776.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 196-1]
gi|306813804|ref|ZP_07447980.1| ATP-dependent protease peptidase subunit [Escherichia coli NC101]
gi|307140630|ref|ZP_07499986.1| ATP-dependent protease peptidase subunit [Escherichia coli H736]
gi|307315161|ref|ZP_07594742.1| 20S proteasome A and B subunits [Escherichia coli W]
gi|331644670|ref|ZP_08345789.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli H736]
gi|331649786|ref|ZP_08350866.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli M605]
gi|331655630|ref|ZP_08356622.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli M718]
gi|331660487|ref|ZP_08361421.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA206]
gi|331665587|ref|ZP_08366485.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA143]
gi|331670785|ref|ZP_08371621.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA271]
gi|331675427|ref|ZP_08376177.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA280]
gi|331680049|ref|ZP_08380711.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli H591]
gi|331685672|ref|ZP_08386255.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli H299]
gi|332282818|ref|ZP_08395231.1| ATP-dependent protease peptidase subunit [Shigella sp. D9]
gi|67465546|sp|P0A7B8|HSLV_ECOLI RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|67465547|sp|P0A7B9|HSLV_ECOL6 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|67465548|sp|P0A7C0|HSLV_ECO57 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|67465551|sp|P0A7C1|HSLV_SHIFL RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|123048626|sp|Q0TAD2|HSLV_ECOL5 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|123146475|sp|Q0SY57|HSLV_SHIF8 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|123558117|sp|Q31U58|HSLV_SHIBS RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|123561282|sp|Q32AA5|HSLV_SHIDS RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|123615640|sp|Q3YV46|HSLV_SHISS RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|166918420|sp|A7ZUE7|HSLV_ECO24 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|166918421|sp|A8A738|HSLV_ECOHS RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|189028448|sp|B1IVE7|HSLV_ECOLC RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|226704540|sp|B7NU73|HSLV_ECO7I RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|226704541|sp|B7M6Y3|HSLV_ECO8A RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|226704542|sp|B7NFN1|HSLV_ECOLU RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|226704543|sp|B1LNN7|HSLV_ECOSM RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|226704544|sp|B7LUS2|HSLV_ESCF3 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|229486311|sp|B1XB98|HSLV_ECODH RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065857|sp|B5YZ72|HSLV_ECO5E RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065874|sp|B6I4S5|HSLV_ECOSE RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238691704|sp|B2TWC8|HSLV_SHIB3 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|254802412|sp|B7UNQ2|HSLV_ECO27 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|254802413|sp|B7LA29|HSLV_ECO55 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|259491387|sp|C5A099|HSLV_ECOBW RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|12518838|gb|AAG59127.1|AE005624_3 heat shock protein hslVU, proteasome-related peptidase subunit
[Escherichia coli O157:H7 str. EDL933]
gi|26111130|gb|AAN83313.1|AE016770_113 ATP-dependent protease hslV [Escherichia coli CFT073]
gi|305035|gb|AAB03064.1| similar to S. cerevisiae potential proteasome component
[Escherichia coli str. K-12 substr. MG1655]
gi|1790367|gb|AAC76914.1| peptidase component of the HslUV protease [Escherichia coli str.
K-12 substr. MG1655]
gi|13364335|dbj|BAB38282.1| heat shock protein HslV [Escherichia coli O157:H7 str. Sakai]
gi|24054511|gb|AAN45443.1| heat shock protein HslVU, proteasome-related peptidase subunit
[Shigella flexneri 2a str. 301]
gi|30043035|gb|AAP18757.1| heat shock protein HslVU, proteasome-related peptidase subunit
[Shigella flexneri 2a str. 2457T]
gi|73857909|gb|AAZ90616.1| heat shock protein hslVU, proteasome-related peptidase subunit
[Shigella sonnei Ss046]
gi|81243040|gb|ABB63750.1| heat shock protein hslVU, proteasome-related peptidase subunit
[Shigella dysenteriae Sd197]
gi|81247692|gb|ABB68400.1| heat shock protein hslVU, proteasome-related peptidase subunit
[Shigella boydii Sb227]
gi|85676128|dbj|BAE77378.1| peptidase component of the HslUV protease [Escherichia coli str.
K12 substr. W3110]
gi|110345860|gb|ABG72097.1| ATP-dependent protease HslV [Escherichia coli 536]
gi|110617341|gb|ABF06008.1| ATP-dependent protease peptidase subunit [Shigella flexneri 5 str.
8401]
gi|157069087|gb|ABV08342.1| ATP-dependent protease HslV [Escherichia coli HS]
gi|157081324|gb|ABV21032.1| ATP-dependent protease HslV [Escherichia coli E24377A]
gi|169756985|gb|ACA79684.1| 20S proteasome A and B subunits [Escherichia coli ATCC 8739]
gi|169891237|gb|ACB04944.1| peptidase component of the HslUV protease [Escherichia coli str.
K-12 substr. DH10B]
gi|170121463|gb|EDS90394.1| ATP-dependent protease HslV [Escherichia albertii TW07627]
gi|170518565|gb|ACB16743.1| ATP-dependent protease HslV [Escherichia coli SMS-3-5]
gi|187430872|gb|ACD10146.1| ATP-dependent protease HslV [Shigella boydii CDC 3083-94]
gi|187769205|gb|EDU33049.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4196]
gi|188016747|gb|EDU54869.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4113]
gi|188490006|gb|EDU65109.1| ATP-dependent protease HslV [Escherichia coli 53638]
gi|189001578|gb|EDU70564.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4076]
gi|189357142|gb|EDU75561.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4401]
gi|189362680|gb|EDU81099.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4486]
gi|189367910|gb|EDU86326.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4501]
gi|189373271|gb|EDU91687.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC869]
gi|189378008|gb|EDU96424.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC508]
gi|190903550|gb|EDV63268.1| ATP-dependent protease HslV [Escherichia coli B7A]
gi|190907006|gb|EDV66607.1| ATP-dependent protease HslV [Escherichia coli F11]
gi|192929461|gb|EDV83069.1| ATP-dependent protease HslV [Escherichia coli E22]
gi|192958597|gb|EDV89035.1| ATP-dependent protease HslV [Escherichia coli E110019]
gi|194414494|gb|EDX30767.1| ATP-dependent protease HslV [Escherichia coli B171]
gi|194418555|gb|EDX34643.1| ATP-dependent protease HslV [Shigella dysenteriae 1012]
gi|194422791|gb|EDX38787.1| ATP-dependent protease HslV [Escherichia coli 101-1]
gi|208729512|gb|EDZ79113.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4206]
gi|208734526|gb|EDZ83213.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4045]
gi|208739991|gb|EDZ87673.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4042]
gi|209161009|gb|ACI38442.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4115]
gi|209752238|gb|ACI74426.1| essential cell division protein [Escherichia coli]
gi|209752240|gb|ACI74427.1| essential cell division protein [Escherichia coli]
gi|209752242|gb|ACI74428.1| essential cell division protein [Escherichia coli]
gi|209752244|gb|ACI74429.1| essential cell division protein [Escherichia coli]
gi|209752246|gb|ACI74430.1| essential cell division protein [Escherichia coli]
gi|209914671|dbj|BAG79745.1| ATP-dependent protease peptidase subunit [Escherichia coli SE11]
gi|215267335|emb|CAS11784.1| peptidase component of the HslUV protease [Escherichia coli O127:H6
str. E2348/69]
gi|217322267|gb|EEC30691.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. TW14588]
gi|218354378|emb|CAV01137.1| peptidase component of the HslUV protease [Escherichia coli 55989]
gi|218358625|emb|CAQ91275.1| peptidase component of the HslUV protease [Escherichia fergusonii
ATCC 35469]
gi|218363263|emb|CAR00908.1| peptidase component of the HslUV protease [Escherichia coli IAI1]
gi|218371349|emb|CAR19181.1| peptidase component of the HslUV protease [Escherichia coli IAI39]
gi|218434655|emb|CAR15588.1| peptidase component of the HslUV protease [Escherichia coli UMN026]
gi|222035644|emb|CAP78389.1| ATP-dependent protease hslV [Escherichia coli LF82]
gi|226838629|gb|EEH70658.1| ATP-dependent protease hslV [Escherichia sp. 1_1_43]
gi|238861982|gb|ACR63980.1| peptidase component of the HslUV protease [Escherichia coli BW2952]
gi|242379468|emb|CAQ34283.1| peptidase component of the HslVU protease, subunit of HslV hexamer
and HslVU protease [Escherichia coli BL21(DE3)]
gi|253326473|gb|ACT31075.1| 20S proteasome A and B subunits [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975783|gb|ACT41454.1| ATP-dependent protease peptidase subunit [Escherichia coli B str.
REL606]
gi|253979940|gb|ACT45610.1| ATP-dependent protease peptidase subunit [Escherichia coli
BL21(DE3)]
gi|254595334|gb|ACT74695.1| peptidase component of the HslUV protease [Escherichia coli O157:H7
str. TW14359]
gi|257756316|dbj|BAI27818.1| peptidase component HslV of the HslUV protease [Escherichia coli
O26:H11 str. 11368]
gi|257761795|dbj|BAI33292.1| peptidase component HslV of the HslUV protease [Escherichia coli
O103:H2 str. 12009]
gi|257767007|dbj|BAI38502.1| peptidase component HslV of the HslUV protease [Escherichia coli
O111:H- str. 11128]
gi|260451231|gb|ACX41653.1| 20S proteasome A and B subunits [Escherichia coli DH1]
gi|281181002|dbj|BAI57332.1| ATP-dependent protease peptidase subunit [Escherichia coli SE15]
gi|281603326|gb|ADA76310.1| ATP-dependent protease hslV [Shigella flexneri 2002017]
gi|284924032|emb|CBG37131.1| ATP-dependent protease (heat shock protein) [Escherichia coli 042]
gi|290765220|gb|ADD59181.1| ATP-dependent protease hslV [Escherichia coli O55:H7 str. CB9615]
gi|291321455|gb|EFE60894.1| ATP-dependent protease hslV [Escherichia coli B088]
gi|291425469|gb|EFE98508.1| ATP-dependent protease peptidase subunit [Escherichia coli
FVEC1412]
gi|291430957|gb|EFF03953.1| ATP-dependent protease hslV [Escherichia coli B185]
gi|291468120|gb|EFF10618.1| conserved hypothetical protein [Escherichia coli B354]
gi|298276334|gb|EFI17854.1| ATP-dependent protease hslV [Escherichia coli FVEC1302]
gi|299880565|gb|EFI88776.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 196-1]
gi|305852802|gb|EFM53249.1| ATP-dependent protease peptidase subunit [Escherichia coli NC101]
gi|306905420|gb|EFN35956.1| 20S proteasome A and B subunits [Escherichia coli W]
gi|307556075|gb|ADN48850.1| ATP-dependent hslVU protease peptidase subunit HslV [Escherichia
coli ABU 83972]
gi|309704357|emb|CBJ03706.1| ATP-dependent protease (heat shock protein) [Escherichia coli ETEC
H10407]
gi|312948507|gb|ADR29334.1| ATP-dependent protease peptidase subunit [Escherichia coli O83:H1
str. NRG 857C]
gi|315063263|gb|ADT77590.1| peptidase component of the HslUV protease [Escherichia coli W]
gi|315138498|dbj|BAJ45657.1| ATP-dependent protease hslV [Escherichia coli DH1]
gi|320198861|gb|EFW73459.1| ATP-dependent protease HslV [Escherichia coli EC4100B]
gi|320639184|gb|EFX08815.1| ATP-dependent protease subunit HslV [Escherichia coli O157:H7 str.
G5101]
gi|320644572|gb|EFX13629.1| ATP-dependent protease subunit HslV [Escherichia coli O157:H- str.
493-89]
gi|320649895|gb|EFX18407.1| ATP-dependent protease subunit HslV [Escherichia coli O157:H- str.
H 2687]
gi|320655296|gb|EFX23242.1| ATP-dependent protease subunit HslV [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660923|gb|EFX28369.1| ATP-dependent protease subunit HslV [Escherichia coli O55:H7 str.
USDA 5905]
gi|320665988|gb|EFX33011.1| ATP-dependent protease subunit HslV [Escherichia coli O157:H7 str.
LSU-61]
gi|323380672|gb|ADX52940.1| 20S proteasome A and B subunits [Escherichia coli KO11]
gi|323934422|gb|EGB30835.1| proteasome A-type and B-type [Escherichia coli E1520]
gi|323939014|gb|EGB35232.1| proteasome A-type and B-type [Escherichia coli E482]
gi|323943670|gb|EGB39776.1| proteasome A-type and B-type [Escherichia coli H120]
gi|323959299|gb|EGB54960.1| proteasome A-type and B-type [Escherichia coli H489]
gi|323964285|gb|EGB59768.1| proteasome A-type and B-type [Escherichia coli M863]
gi|323969684|gb|EGB64968.1| proteasome A-type and B-type [Escherichia coli TA007]
gi|323974341|gb|EGB69470.1| proteasome A-type and B-type [Escherichia coli TW10509]
gi|324111447|gb|EGC05428.1| proteasome A-type and B-type [Escherichia fergusonii B253]
gi|324115666|gb|EGC09602.1| proteasome A-type and B-type [Escherichia coli E1167]
gi|326342650|gb|EGD66423.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. 1125]
gi|327250570|gb|EGE62278.1| ATP-dependent protease hslV [Escherichia coli STEC_7v]
gi|330908253|gb|EGH36772.1| ATP-dependent protease HslV [Escherichia coli AA86]
gi|331036132|gb|EGI08368.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli H736]
gi|331041419|gb|EGI13569.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli M605]
gi|331046731|gb|EGI18816.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli M718]
gi|331052436|gb|EGI24473.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA206]
gi|331057272|gb|EGI29262.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA143]
gi|331062040|gb|EGI33963.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA271]
gi|331067487|gb|EGI38892.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli TA280]
gi|331072375|gb|EGI43708.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli H591]
gi|331077143|gb|EGI48358.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
coli H299]
gi|332105170|gb|EGJ08516.1| ATP-dependent protease peptidase subunit [Shigella sp. D9]
gi|332345928|gb|AEE59262.1| ATP-dependent protease HslV [Escherichia coli UMNK88]
gi|332751851|gb|EGJ82248.1| ATP-dependent protease hslV [Shigella flexneri K-671]
gi|332752625|gb|EGJ83011.1| ATP-dependent protease hslV [Shigella flexneri 2747-71]
gi|332998638|gb|EGK18235.1| ATP-dependent protease hslV [Shigella flexneri K-218]
gi|333013911|gb|EGK33273.1| ATP-dependent protease hslV [Shigella flexneri K-304]
Length = 176
Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats.
Identities = 103/172 (59%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEELS 173
>gi|254295472|ref|YP_003061495.1| ATP-dependent protease peptidase subunit [Hirschia baltica ATCC
49814]
gi|254044003|gb|ACT60798.1| 20S proteasome A and B subunits [Hirschia baltica ATCC 49814]
Length = 185
Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats.
Identities = 124/185 (67%), Positives = 148/185 (80%), Gaps = 1/185 (0%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M H+TTIL VRK G VVI GDGQVS+G TVMK NARKVRRLG GNIIAGFA
Sbjct: 1 MTQASSPQSWHSTTILAVRKPGRVVIIGDGQVSMGNTVMKGNARKVRRLGEGGNIIAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL ERLE KLE++P QL R++VELAKDWR DKYL+ LEA++++ADK TLV+T
Sbjct: 61 GATADAFTLFERLELKLERFPGQLQRAAVELAKDWRTDKYLQKLEALLIVADKHTTLVLT 120
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
GMGDVLEPE V+AIGSGG+YALSAARA+ + AE + RKAM +AA+ICVYTN+N V+
Sbjct: 121 GMGDVLEPEYDVVAIGSGGNYALSAARAIFDYEEDAEVLGRKAMEVAAEICVYTNNNFVV 180
Query: 183 ETLKV 187
E+L V
Sbjct: 181 ESLDV 185
>gi|218458684|ref|ZP_03498775.1| ATP-dependent protease peptidase subunit [Rhizobium etli Kim 5]
Length = 175
Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats.
Identities = 134/173 (77%), Positives = 155/173 (89%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG++A +AARALM T SAEEIAR+A+ IAADICVYTNHN+V+E+L V
Sbjct: 122 AIGSGGNFAFAAARALMDTDKSAEEIARRALEIAADICVYTNHNLVVESLDVE 174
>gi|261254141|ref|ZP_05946714.1| ATP-dependent protease HslV [Vibrio orientalis CIP 102891]
gi|260937532|gb|EEX93521.1| ATP-dependent protease HslV [Vibrio orientalis CIP 102891]
Length = 180
Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats.
Identities = 100/174 (57%), Positives = 138/174 (79%), Gaps = 1/174 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL E+
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG++A +AA AL+ +T+ A EIA K+++IA DICV+TNH+ +E L++
Sbjct: 122 AIGSGGNFAQAAATALLENTELDAREIAEKSLTIAGDICVFTNHHHTIEELEIP 175
>gi|268593397|ref|ZP_06127618.1| ATP-dependent protease HslVU, peptidase subunit [Providencia
rettgeri DSM 1131]
gi|291311094|gb|EFE51547.1| ATP-dependent protease HslVU, peptidase subunit [Providencia
rettgeri DSM 1131]
Length = 176
Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats.
Identities = 102/172 (59%), Positives = 134/172 (77%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADEHTSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA SAARAL+ +T SA+EIA KA++IA DIC+YTNHN+ E +
Sbjct: 122 AIGSGGPYAQSAARALLENTDLSAKEIAEKALAIAGDICIYTNHNVNFEEIS 173
>gi|209551553|ref|YP_002283470.1| ATP-dependent protease peptidase subunit [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|238065933|sp|B5ZV98|HSLV_RHILW RecName: Full=ATP-dependent protease subunit HslV
gi|209537309|gb|ACI57244.1| 20S proteasome A and B subunits [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 175
Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats.
Identities = 136/173 (78%), Positives = 156/173 (90%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG++A +AARALM T SAEEIAR+A+ IAADICVYTNHNIV+E+L V
Sbjct: 122 AIGSGGNFAFAAARALMDTDKSAEEIARRALEIAADICVYTNHNIVVESLDVE 174
>gi|77165803|ref|YP_344328.1| ATP-dependent protease peptidase subunit [Nitrosococcus oceani ATCC
19707]
gi|254433381|ref|ZP_05046889.1| peptidase, T1 family [Nitrosococcus oceani AFC27]
gi|123593709|sp|Q3J8P8|HSLV_NITOC RecName: Full=ATP-dependent protease subunit HslV
gi|76884117|gb|ABA58798.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Nitrosococcus oceani ATCC 19707]
gi|207089714|gb|EDZ66985.1| peptidase, T1 family [Nitrosococcus oceani AFC27]
Length = 179
Score = 293 bits (751), Expect = 9e-78, Method: Composition-based stats.
Identities = 103/175 (58%), Positives = 129/175 (73%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL+VR+ VVI GDGQVS+ VMK NARKVRRL +IAGFAG +ADAFTL
Sbjct: 4 FRGTTILSVRRQEQVVIGGDGQVSMNNIVMKGNARKVRRLFHNQVIAGFAGGTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD + VI+G GDV+EPE
Sbjct: 64 ERFEAKLEKHQGNLTRAAVELAKDWRSDRSLRRLEALLAVADHKASYVISGNGDVIEPEY 123
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G++AIGSGG YA +AARAL+ +T SA I KA+SIAADIC+YTN ++ +E L
Sbjct: 124 GLIAIGSGGPYAQAAARALLENTDFSARVIVEKALSIAADICIYTNTHLTVEELS 178
>gi|163867503|ref|YP_001608702.1| ATP-dependent protease peptidase subunit [Bartonella tribocorum CIP
105476]
gi|161017149|emb|CAK00707.1| heat shock protein [Bartonella tribocorum CIP 105476]
Length = 193
Score = 293 bits (750), Expect = 9e-78, Method: Composition-based stats.
Identities = 131/183 (71%), Positives = 154/183 (84%), Gaps = 1/183 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSS 65
+H M+ TTI+TVRK G VV+AGDGQVSLGQT+MK NARKVRRLGK G +IAGFAG++
Sbjct: 3 EHKPDIMYGTTIITVRKGGKVVMAGDGQVSLGQTIMKGNARKVRRLGKSGVVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK +TL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKVTLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GVMAIGSGG++ALSAARALM AE IARKAM+IAA ICVYTN + +ETL
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARALMDLDLDAETIARKAMAIAAKICVYTNDHFTIETL 182
Query: 186 KVG 188
Sbjct: 183 DAE 185
>gi|49475019|ref|YP_033060.1| ATP-dependent protease peptidase subunit [Bartonella henselae str.
Houston-1]
gi|85542196|sp|Q6G5G1|HSLV_BARHE RecName: Full=ATP-dependent protease subunit HslV
gi|49237824|emb|CAF27019.1| Heat shock protein hslV [Bartonella henselae str. Houston-1]
Length = 193
Score = 293 bits (750), Expect = 9e-78, Method: Composition-based stats.
Identities = 130/183 (71%), Positives = 154/183 (84%), Gaps = 1/183 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSS 65
+H M+ TTI+TVRK G VV+AGDGQVSLGQT+MK NARKVRRLGK G +IAGFAG++
Sbjct: 3 EHKPDIMYGTTIITVRKGGKVVMAGDGQVSLGQTIMKGNARKVRRLGKSGAVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK ITL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKITLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+G+MAIGSGG++ALSAARAL+ AE IARKAM+IAA ICVYTN + +ETL
Sbjct: 123 DVLEPEDGIMAIGSGGNFALSAARALIDMDLDAETIARKAMNIAAKICVYTNDHFTIETL 182
Query: 186 KVG 188
Sbjct: 183 DAE 185
>gi|218508804|ref|ZP_03506682.1| ATP-dependent protease peptidase subunit [Rhizobium etli Brasil 5]
Length = 175
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 135/173 (78%), Positives = 155/173 (89%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG++A +AARALM T SAEEIAR+A+ IAADICVYTNHNIV+E+L V
Sbjct: 122 AIGSGGNFAFAAARALMDTDKSAEEIARRALDIAADICVYTNHNIVVESLDVE 174
>gi|238794364|ref|ZP_04637975.1| ATP-dependent protease hslV [Yersinia intermedia ATCC 29909]
gi|238726265|gb|EEQ17808.1| ATP-dependent protease hslV [Yersinia intermedia ATCC 29909]
Length = 176
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ SA++I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLDNTELSAKDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|149189184|ref|ZP_01867471.1| ATP-dependent protease peptidase subunit [Vibrio shilonii AK1]
gi|148836938|gb|EDL53888.1| ATP-dependent protease peptidase subunit [Vibrio shilonii AK1]
Length = 177
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 101/172 (58%), Positives = 134/172 (77%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A +AA AL+ +T A EIA K++ IA DICV+TNH +E L+
Sbjct: 122 AIGSGGNFAQAAATALLENTDLDAREIAEKSLKIAGDICVFTNHYHTVEELE 173
>gi|11513574|pdb|1G3I|G Chain G, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513575|pdb|1G3I|H Chain H, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513576|pdb|1G3I|I Chain I, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513577|pdb|1G3I|J Chain J, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513578|pdb|1G3I|K Chain K, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513579|pdb|1G3I|L Chain L, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513580|pdb|1G3I|M Chain M, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513581|pdb|1G3I|N Chain N, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513582|pdb|1G3I|O Chain O, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513583|pdb|1G3I|P Chain P, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513584|pdb|1G3I|Q Chain Q, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513585|pdb|1G3I|R Chain R, Crystal Structure Of The Hsluv Protease-Chaperone Complex
gi|11513593|pdb|1G3K|A Chain A, Crystal Structure Of The H. Influenzae Protease Hslv At
1.9 A Resolution
gi|11513594|pdb|1G3K|B Chain B, Crystal Structure Of The H. Influenzae Protease Hslv At
1.9 A Resolution
gi|11513595|pdb|1G3K|C Chain C, Crystal Structure Of The H. Influenzae Protease Hslv At
1.9 A Resolution
gi|17943074|pdb|1JJW|A Chain A, Structure Of Haemophilus Influenzae Hslv Protein At 1.9 A
Resolution
gi|17943075|pdb|1JJW|B Chain B, Structure Of Haemophilus Influenzae Hslv Protein At 1.9 A
Resolution
gi|17943076|pdb|1JJW|C Chain C, Structure Of Haemophilus Influenzae Hslv Protein At 1.9 A
Resolution
gi|21465938|pdb|1KYI|G Chain G, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465939|pdb|1KYI|H Chain H, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465940|pdb|1KYI|I Chain I, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465941|pdb|1KYI|J Chain J, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465942|pdb|1KYI|K Chain K, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465943|pdb|1KYI|L Chain L, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465944|pdb|1KYI|M Chain M, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465945|pdb|1KYI|N Chain N, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465946|pdb|1KYI|O Chain O, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465947|pdb|1KYI|P Chain P, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465948|pdb|1KYI|Q Chain Q, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|21465949|pdb|1KYI|R Chain R, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
gi|33357695|pdb|1OFH|G Chain G, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357696|pdb|1OFH|H Chain H, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357697|pdb|1OFH|I Chain I, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357698|pdb|1OFH|L Chain L, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357699|pdb|1OFH|M Chain M, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357700|pdb|1OFH|N Chain N, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357708|pdb|1OFI|G Chain G, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357709|pdb|1OFI|H Chain H, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357710|pdb|1OFI|I Chain I, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357711|pdb|1OFI|L Chain L, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357712|pdb|1OFI|M Chain M, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
gi|33357713|pdb|1OFI|N Chain N, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
(H. Influenzae)
Length = 174
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 106/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 1 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 60
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-V 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE +
Sbjct: 61 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 120
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA DICV+TN N +E L
Sbjct: 121 LAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL 172
>gi|325183742|emb|CCA18201.1| ATPdependent protease hslV putative [Albugo laibachii Nc14]
Length = 221
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 109/178 (61%), Positives = 141/178 (79%), Gaps = 2/178 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MH TTIL V+K+G V + GDGQVSLG TV+K NA+KVRR+ I+AGFAGS+ADAFTL+
Sbjct: 45 MHGTTILCVKKEGKVCLIGDGQVSLGHTVVKPNAKKVRRI-NDTILAGFAGSTADAFTLM 103
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++P QL R+ VELAK+WRMDKYLR+LEA+++++D + +TG GDV+EP +
Sbjct: 104 ERLESKLEEHPGQLTRACVELAKNWRMDKYLRHLEAILIVSDLEQSYTLTGNGDVVEPHD 163
Query: 133 GVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
G++ GSGG YAL+AARAL+ AE + RKAM+IAADICVYTNHN V+E L+ +
Sbjct: 164 GIIGTGSGGHYALAAARALIDQPGLDAEAVGRKAMNIAADICVYTNHNFVVEILEKKE 221
>gi|119505530|ref|ZP_01627602.1| ATP-dependent protease peptidase subunit [marine gamma
proteobacterium HTCC2080]
gi|119458639|gb|EAW39742.1| ATP-dependent protease peptidase subunit [marine gamma
proteobacterium HTCC2080]
Length = 178
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 107/175 (61%), Positives = 136/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+DG V I GDGQVS+G TVMK NARKVRRL + ++IAGFAG +ADAFTL
Sbjct: 3 QFHGTTIVSVRRDGQVAIGGDGQVSMGNTVMKGNARKVRRLYRDSVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E +LE+Y QL R++VELAK WR ++ LR LEA++ +AD +L+ITG GDV+EPE
Sbjct: 63 FELFEAQLEKYQGQLTRAAVELAKLWRSERALRRLEALLAVADLDTSLIITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
N ++AIGSGG YA +AA AL +T SAEEI K++SIA DICV+TNHN +ETL
Sbjct: 123 NSLIAIGSGGPYAQAAAHALTENTTLSAEEIVTKSLSIAGDICVFTNHNQTIETL 177
>gi|91213474|ref|YP_543460.1| ATP-dependent protease peptidase subunit [Escherichia coli UTI89]
gi|117626198|ref|YP_859521.1| ATP-dependent protease peptidase subunit [Escherichia coli APEC O1]
gi|218560999|ref|YP_002393912.1| ATP-dependent protease peptidase subunit [Escherichia coli S88]
gi|218692216|ref|YP_002400428.1| ATP-dependent protease peptidase subunit [Escherichia coli ED1a]
gi|237702965|ref|ZP_04533446.1| ATP-dependent protease peptidase subunit [Escherichia sp.
3_2_53FAA]
gi|122421650|sp|Q1R3Y5|HSLV_ECOUT RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|166221638|sp|A1AIA7|HSLV_ECOK1 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|226704539|sp|B7MI64|HSLV_ECO45 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|254802414|sp|B7MR21|HSLV_ECO81 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|91075048|gb|ABE09929.1| ATP-dependent hslVU protease peptidase subunit hslV [Escherichia
coli UTI89]
gi|115515322|gb|ABJ03397.1| ATP-dependent hslVU protease peptidase subunit hslV [Escherichia
coli APEC O1]
gi|218367768|emb|CAR05562.1| peptidase component of the HslUV protease [Escherichia coli S88]
gi|218429780|emb|CAR10604.1| peptidase component of the HslUV protease [Escherichia coli ED1a]
gi|226902902|gb|EEH89161.1| ATP-dependent protease peptidase subunit [Escherichia sp.
3_2_53FAA]
gi|294492730|gb|ADE91486.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
IHE3034]
gi|307629007|gb|ADN73311.1| ATP-dependent protease peptidase subunit [Escherichia coli UM146]
gi|323949422|gb|EGB45311.1| proteasome A-type and B-type [Escherichia coli H252]
gi|323954297|gb|EGB50082.1| proteasome A-type and B-type [Escherichia coli H263]
Length = 176
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 103/172 (59%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLIKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEELS 173
>gi|21759190|sp|Q92TA9|HSLV_RHIME RecName: Full=ATP-dependent protease subunit HslV
Length = 176
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 134/176 (76%), Positives = 158/176 (89%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MHATTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRRL KG++IAGFAG++ADAFTLL
Sbjct: 1 MHATTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRLSKGDVIAGFAGATADAFTLL 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLEQYP+QL+R++VELAKDWR +KYLRNLEAM+L+AD+T+TL ITG GDVLEPE+
Sbjct: 61 ERLEAKLEQYPDQLMRAAVELAKDWRTNKYLRNLEAMMLVADRTVTLAITGNGDVLEPEH 120
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
G +AIGSGG+YA +AARALM + SAEEIAR+A+ IA DICVYTNHN+V+ETL
Sbjct: 121 GTIAIGSGGNYAFAAARALMDSDKSAEEIARRALEIAGDICVYTNHNVVVETLDAE 176
>gi|68249095|ref|YP_248207.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
86-028NP]
gi|81336499|sp|Q4QN50|HSLV_HAEI8 RecName: Full=ATP-dependent protease subunit HslV
gi|68057294|gb|AAX87547.1| ATP-dependent protease HslV [Haemophilus influenzae 86-028NP]
Length = 175
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 105/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-V 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA D+CV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAREIVEKSLKIAGDVCVFTNTNFTIEEL 173
>gi|190889690|ref|YP_001976232.1| ATP-dependent heat shock protease HslVU protein, peptidase subunit
HslV [Rhizobium etli CIAT 652]
gi|238065932|sp|B3PWI6|HSLV_RHIE6 RecName: Full=ATP-dependent protease subunit HslV
gi|190694969|gb|ACE89054.1| ATP-dependent heat shock protease HslVU protein, peptidase subunit
HslV [Rhizobium etli CIAT 652]
Length = 175
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 134/173 (77%), Positives = 155/173 (89%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG ++AGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVVAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG++A +AARALM T SAEEIAR+A+ IAADICVYTNHNIV+E+L V
Sbjct: 122 AIGSGGNFAFAAARALMDTDKSAEEIARRALDIAADICVYTNHNIVVESLDVE 174
>gi|148927583|ref|ZP_01811055.1| ATP-dependent protease peptidase subunit [candidate division TM7
genomosp. GTL1]
gi|147887070|gb|EDK72566.1| ATP-dependent protease peptidase subunit [candidate division TM7
genomosp. GTL1]
Length = 181
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 102/177 (57%), Positives = 142/177 (80%), Gaps = 1/177 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+++ TTI++VR++G+VV+ GDGQV+LG T+MK+NARKVRRL I+AGFAG++ADAFT
Sbjct: 5 IELRGTTIVSVRRNGMVVVGGDGQVTLGNTIMKSNARKVRRLYNNKILAGFAGATADAFT 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ER E KLE + L+RS+VELAKDWR DK LR LEAM+++AD +L+I+G GDV+EP
Sbjct: 65 LFERFESKLETHQGNLVRSAVELAKDWRTDKMLRRLEAMLVVADAKASLIISGNGDVIEP 124
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
EN ++AIGSGG +A AA+AL+ +T+ +A +I KA++IAA+ C+YTN N +ETL+
Sbjct: 125 ENSLIAIGSGGPFAKCAAQALLENTKLNARDITEKALTIAANTCIYTNTNFTIETLE 181
>gi|33594013|ref|NP_881657.1| ATP-dependent protease peptidase subunit [Bordetella pertussis
Tohama I]
gi|47605654|sp|Q7VUK0|HSLV_BORPE RecName: Full=ATP-dependent protease subunit HslV
gi|33564087|emb|CAE43355.1| ATP-dependent protease heat shock protein [Bordetella pertussis
Tohama I]
gi|332383430|gb|AEE68277.1| ATP-dependent protease peptidase subunit [Bordetella pertussis CS]
Length = 179
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 97/175 (55%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K RK+RRL ++AGFAG++ADAFTL
Sbjct: 3 QFHATTIVCVRRGNHVALGGDGQVTLGNIVIKGTVRKIRRLYHDKVLAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+++AD TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGHLMRAAVELTRDWRTDRVLRRLEAMLIVADTEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA AL+ +T+ E I ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELPPEAIVKQSLEIAGDLCIYTNQNHVIETL 177
>gi|304311983|ref|YP_003811581.1| Peptidase component of the HslUV protease (heat shock protein)
[gamma proteobacterium HdN1]
gi|301797716|emb|CBL45938.1| Peptidase component of the HslUV protease (heat shock protein)
[gamma proteobacterium HdN1]
Length = 179
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 108/177 (61%), Positives = 136/177 (76%), Gaps = 1/177 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+ R++G VVI GDGQV+LG TVMK NARKVRRL +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTILSARRNGKVVIGGDGQVTLGNTVMKGNARKVRRLYHDKVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+RS+VELAKDWR D+ LR LEA++ +AD +L+ITG GDV++PE
Sbjct: 63 FERFEAKLEKHQGHLVRSAVELAKDWRTDRMLRRLEALLAVADADASLIITGNGDVIQPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
N ++AIGSGG +ALSAARAL +T+ SA EI K++ IAADIC+YTNHN +E L
Sbjct: 123 NDLIAIGSGGPFALSAARALYENTELSAREIIEKSLGIAADICIYTNHNFTIEELSC 179
>gi|85711523|ref|ZP_01042581.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Idiomarina
baltica OS145]
gi|85694675|gb|EAQ32615.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Idiomarina
baltica OS145]
Length = 197
Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats.
Identities = 100/170 (58%), Positives = 129/170 (75%), Gaps = 1/170 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ V I GDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 18 TTIVSVRRGDKVAIGGDGQVSLGNTVMKGNAKKVRRLYHDQVLAGFAGGTADAFTLFERF 77
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLEQ+ L+R++VELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PEN ++
Sbjct: 78 ESKLEQHQGNLMRAAVELAKDWRTDRALRRLEALLAVADKETSLIITGNGDVVQPENDLI 137
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLET 184
AIGSGG YA +AA A++ T+ SA +I KA++IA DICVYTN +E
Sbjct: 138 AIGSGGPYAQAAATAMLETTELSARDIVEKALTIAGDICVYTNGYQTIEE 187
>gi|332286550|ref|YP_004418461.1| ATP-dependent protease peptidase subunit [Pusillimonas sp. T7-7]
gi|330430503|gb|AEC21837.1| ATP-dependent protease peptidase subunit [Pusillimonas sp. T7-7]
Length = 177
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 102/175 (58%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K ARK+RRL I+AGFAG++ADAFTL
Sbjct: 3 QFHATTIICVRRGEHVALGGDGQVTLGNIVIKGTARKIRRLYNDKILAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+RS+VEL KDWR D+ LR LEAM+++ADK TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGNLMRSAVELTKDWRTDRVLRRLEAMLIVADKEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
NG+ AIGSGG+YA SAA AL+ T + +I +K++ IA D+C+YTN N ++ETL
Sbjct: 123 NGLAAIGSGGAYAQSAALALLQSTDMAPADIVKKSLEIAGDLCIYTNQNHIVETL 177
>gi|292492405|ref|YP_003527844.1| 20S proteasome A and subunit betas [Nitrosococcus halophilus Nc4]
gi|291581000|gb|ADE15457.1| 20S proteasome A and B subunits [Nitrosococcus halophilus Nc4]
Length = 179
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 99/176 (56%), Positives = 130/176 (73%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR+ VV+ GDGQVS+ VMK NARKVRRL G ++AGFAG +ADAFTL
Sbjct: 3 QFRGTTILSVRRQEQVVMGGDGQVSMNDIVMKGNARKVRRLFHGQVVAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L R++VELAKDWR D+ LR LEA++ +A+ + +I+G GDV+EPE
Sbjct: 63 FERFEAKLEKHQGNLTRAAVELAKDWRSDRSLRRLEALLAVANPKASYIISGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G++AIGSGG YA +AARAL+ +T SA I KA++IAADIC+YTN + +E L
Sbjct: 123 YGLIAIGSGGPYAQAAARALLENTDLSARAITEKALNIAADICIYTNSYLTIEELS 178
>gi|293602499|ref|ZP_06684945.1| ATP-dependent protease HslV [Achromobacter piechaudii ATCC 43553]
gi|292819261|gb|EFF78296.1| ATP-dependent protease HslV [Achromobacter piechaudii ATCC 43553]
Length = 179
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 99/175 (56%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K ARK+RRL I+AGFAG++ADAFTL
Sbjct: 3 QFHATTIVCVRRGNRVALGGDGQVTLGNIVVKGTARKIRRLYHDKILAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+++AD TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGNLMRAAVELTRDWRTDRVLRRLEAMLIVADTEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA AL+ +T+ S E + ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELSPEAVVKQSLEIAGDLCIYTNQNHVIETL 177
>gi|83648620|ref|YP_437055.1| ATP-dependent protease peptidase subunit [Hahella chejuensis KCTC
2396]
gi|123530767|sp|Q2S9P4|HSLV_HAHCH RecName: Full=ATP-dependent protease subunit HslV
gi|83636663|gb|ABC32630.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Hahella
chejuensis KCTC 2396]
Length = 181
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 102/172 (59%), Positives = 134/172 (77%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+DG V + GDGQVSLG TVMK NARKVRRL +IAGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRDGKVAMGGDGQVSLGNTVMKGNARKVRRLYHNKVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ LR LEA++ +AD +L+ITG GDV+EPEN ++
Sbjct: 62 EAQLEKHQGNLVRAAVELAKDWRTDRALRRLEALLAVADNKASLIITGNGDVIEPENSLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA +AARAL+ +T+ A +I +K++ IA DICV+TN N+ LE +
Sbjct: 122 AIGSGGPYAQAAARALLENTELEASDIVKKSLVIAGDICVFTNQNLTLEEID 173
>gi|16272440|ref|NP_438654.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae Rd
KW20]
gi|145628876|ref|ZP_01784676.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
22.1-21]
gi|145638589|ref|ZP_01794198.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittII]
gi|260580441|ref|ZP_05848269.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
RdAW]
gi|260582239|ref|ZP_05850032.1| heat shock protein [Haemophilus influenzae NT127]
gi|1170387|sp|P43772|HSLV_HAEIN RecName: Full=ATP-dependent protease subunit HslV
gi|1573473|gb|AAC22153.1| heat shock protein (hslV) [Haemophilus influenzae Rd KW20]
gi|144979346|gb|EDJ89032.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
22.1-21]
gi|145272184|gb|EDK12092.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittII]
gi|260092783|gb|EEW76718.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
RdAW]
gi|260094607|gb|EEW78502.1| heat shock protein [Haemophilus influenzae NT127]
gi|301169213|emb|CBW28810.1| peptidase component of the HslUV protease [Haemophilus influenzae
10810]
gi|309750091|gb|ADO80075.1| Protease HslVU, peptidase subunit [Haemophilus influenzae R2866]
Length = 175
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 106/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-V 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL 173
>gi|310817175|ref|YP_003965139.1| ATP-dependent HslUV protease [Ketogulonicigenium vulgare Y25]
gi|308755910|gb|ADO43839.1| ATP-dependent HslUV protease [Ketogulonicigenium vulgare Y25]
Length = 194
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 122/187 (65%), Positives = 143/187 (76%), Gaps = 3/187 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGF 61
M + H TTI+ VRK+G VVIAGDGQVSLGQTV+K ARKVRRL G ++ GF
Sbjct: 1 MSQSDFP-GWHGTTIIGVRKNGKVVIAGDGQVSLGQTVIKGTARKVRRLNPGGRPVLVGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE+KLE P Q+ R+ VELAKDWR DKYL+ LEAM+++ D LV+
Sbjct: 60 AGSTADAFTLLERLERKLEAAPGQMARACVELAKDWRTDKYLQKLEAMLIVTDGDALLVV 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG+YAL+AARALMST AE IAR+AMSIAA+ICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNYALAAARALMSTDLDAENIARRAMSIAAEICVYTNGNVT 179
Query: 182 LETLKVG 188
LE L
Sbjct: 180 LEQLSAP 186
>gi|329122376|ref|ZP_08250963.1| ATP-dependent protease HslV [Haemophilus aegyptius ATCC 11116]
gi|327473658|gb|EGF19077.1| ATP-dependent protease HslV [Haemophilus aegyptius ATCC 11116]
Length = 175
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 105/172 (61%), Positives = 136/172 (79%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++V ++G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVHRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-V 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL +T+ SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALAENTELSAREIVEKSLKIAGDICVFTNTNFTIEEL 173
>gi|37528577|ref|NP_931922.1| ATP-dependent protease peptidase subunit [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|47605635|sp|Q7MYC2|HSLV_PHOLL RecName: Full=ATP-dependent protease subunit HslV
gi|36788015|emb|CAE17134.1| ATP-dependent protease HslV (heat shock protein) [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 176
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 99/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADENTSLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG +A SAARA++ +T A +IA KA++IA DIC+YTNHN E L
Sbjct: 122 AIGSGGPFAQSAARAMLENTDLGARQIAEKALTIAGDICIYTNHNHNFEEL 172
>gi|149377309|ref|ZP_01895055.1| ATP-dependent protease peptidase subunit [Marinobacter algicola
DG893]
gi|149358406|gb|EDM46882.1| ATP-dependent protease peptidase subunit [Marinobacter algicola
DG893]
Length = 176
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 106/175 (60%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR+D V + GDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTILSVRRDDEVAMGGDGQVSLGNTVMKGNARKVRRLYNDKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L R++VELAKDWR D+ LR LEA++ +ADKT +L+ITG GDV+EPE G++
Sbjct: 62 EAQLEKHQGNLTRAAVELAKDWRTDRALRRLEALLAVADKTASLIITGNGDVIEPEQGLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AIGSGG +A ++ARAL+ +T A EI K + IAADIC+YTNHN LE L D
Sbjct: 122 AIGSGGPFAQASARALLENTDLKANEIVEKGLDIAADICIYTNHNRTLEVLSAND 176
>gi|330720267|gb|EGG98628.1| ATP-dependent protease HslV [gamma proteobacterium IMCC2047]
Length = 176
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 101/172 (58%), Positives = 137/172 (79%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VRK+G VV+ GDGQVSLG TVMK NARKVRRL + +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRKNGKVVLGGDGQVSLGNTVMKGNARKVRRLYRDQVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L+ LEA++ IA+K +L+I+G GDV+EPE+G++
Sbjct: 62 EAQLEKHQGHLMRAAVELAKDWRTDRSLQRLEALLAIANKDHSLIISGNGDVIEPEHGLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG +A +AA AL+ ++ SA EI K++ IAA+ICV+TN N +E L
Sbjct: 122 AIGSGGPFAQAAALALIENSDLSAREITEKSLEIAANICVFTNQNRTIEELD 173
>gi|319898328|ref|YP_004158421.1| heat shock protein [Bartonella clarridgeiae 73]
gi|319402292|emb|CBI75831.1| heat shock protein [Bartonella clarridgeiae 73]
Length = 193
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 131/183 (71%), Positives = 153/183 (83%), Gaps = 1/183 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSS 65
+H M+ TTI+TVRKD VV+AGDGQVSLGQT+MK+NARKVRRLGKG +IAGFAG++
Sbjct: 3 EHKPNIMYGTTIVTVRKDNKVVMAGDGQVSLGQTIMKSNARKVRRLGKGGTVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK +TL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKVTLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GVMAIGSGG++ALSAAR LM AE IA KAMSIAA ICVYTN N +ETL
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARVLMDIDLDAEAIACKAMSIAAKICVYTNDNFTIETL 182
Query: 186 KVG 188
Sbjct: 183 DAE 185
>gi|311109412|ref|YP_003982265.1| ATP-dependent protease HslV [Achromobacter xylosoxidans A8]
gi|310764101|gb|ADP19550.1| ATP-dependent protease HslV [Achromobacter xylosoxidans A8]
Length = 179
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 99/175 (56%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K ARK+RRL I+AGFAG++ADAFTL
Sbjct: 3 QFHATTIVCVRRGNRVALGGDGQVTLGNIVIKGTARKIRRLYHDKILAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+++AD TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGNLMRAAVELTRDWRTDRVLRRLEAMLIVADAEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA AL+ +T+ S E + ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELSPEAVVKQSLEIAGDLCIYTNQNHVIETL 177
>gi|319403620|emb|CBI77205.1| heat shock protein [Bartonella rochalimae ATCC BAA-1498]
Length = 193
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 129/183 (70%), Positives = 151/183 (82%), Gaps = 1/183 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSS 65
+H M+ TTI+TVRK VV+AGDGQVSLGQT+MK+NARKVRRLGK G +IAGFAG++
Sbjct: 3 EHKPDIMYGTTIVTVRKGNKVVMAGDGQVSLGQTIMKSNARKVRRLGKSGAVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+AD+ TL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADQKTTLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GVMAIGSGG++ALSAAR LM AE IA KAMSIAA ICVYTN N +ETL
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARVLMDMDLDAETIASKAMSIAAKICVYTNDNFTIETL 182
Query: 186 KVG 188
Sbjct: 183 DAE 185
>gi|226326795|ref|ZP_03802313.1| hypothetical protein PROPEN_00655 [Proteus penneri ATCC 35198]
gi|225204632|gb|EEG86986.1| hypothetical protein PROPEN_00655 [Proteus penneri ATCC 35198]
Length = 176
Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats.
Identities = 102/175 (58%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRKGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADENTSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AIGSGG YA +AARA++ +T+ SA EIA KA+SIA DIC+YTNHN+ E L +
Sbjct: 122 AIGSGGPYAQAAARAMLENTELSAREIAEKALSIAGDICIYTNHNVNFEELSSKE 176
>gi|327189985|gb|EGE57107.1| ATP-dependent protease peptidase subunit [Rhizobium etli CNPAF512]
Length = 175
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 136/173 (78%), Positives = 156/173 (90%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG++A +AARALM T SAEEIAR+A+ IAADICVYTNHNIV+E+L V
Sbjct: 122 AIGSGGNFAFAAARALMDTDKSAEEIARRALDIAADICVYTNHNIVVESLDVE 174
>gi|319791657|ref|YP_004153297.1| 20S proteasome a and b subunits [Variovorax paradoxus EPS]
gi|315594120|gb|ADU35186.1| 20S proteasome A and B subunits [Variovorax paradoxus EPS]
Length = 181
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 104/179 (58%), Positives = 135/179 (75%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTI++VR+ V I GDGQV+LG V+K ARKVRRL G ++AGFAG++AD
Sbjct: 3 QFHGTTIVSVRRKTPQGDQVAIGGDGQVTLGNIVIKGTARKVRRLYHGKVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ L R++VEL KDWR D+ LR LEAM+ +AD T +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGHLTRAAVELTKDWRTDRVLRKLEAMLAVADATTSLIITGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE+GV+AIGSGG+YA SAA+AL+ +T SAE+I RK++ IA +IC+YTN N +E L
Sbjct: 123 LEPEDGVIAIGSGGAYAQSAAKALIENTDLSAEQIVRKSLGIAGEICIYTNMNHTVEAL 181
>gi|300114764|ref|YP_003761339.1| 20S proteasome A and B subunits [Nitrosococcus watsonii C-113]
gi|299540701|gb|ADJ29018.1| 20S proteasome A and B subunits [Nitrosococcus watsonii C-113]
Length = 179
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 103/175 (58%), Positives = 129/175 (73%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL+VR+ VVI GDGQVS+ VMK NARKVRRL +IAGFAG +ADAFTL
Sbjct: 4 FRGTTILSVRRQEQVVIGGDGQVSMNSIVMKGNARKVRRLFHDQVIAGFAGGTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KLE++ L R++VELAKDWR D+ LR LEA++ +AD + VI+G GDV+EPE
Sbjct: 64 ERFEAKLEKHQGNLTRAAVELAKDWRSDRSLRRLEALLAVADHKASYVISGNGDVIEPEY 123
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G++AIGSGG YA +AARAL+ +T SA I KA+SIAADIC+YTN ++ +E L
Sbjct: 124 GLIAIGSGGPYAQAAARALLENTDFSARAIVEKALSIAADICIYTNTHLTIEELS 178
>gi|103487079|ref|YP_616640.1| ATP-dependent protease peptidase subunit [Sphingopyxis alaskensis
RB2256]
gi|98977156|gb|ABF53307.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Sphingopyxis alaskensis RB2256]
Length = 188
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 118/187 (63%), Positives = 148/187 (79%), Gaps = 2/187 (1%)
Query: 4 MGDKH--YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
M H A H TTIL+ R +G VV+ GDGQVS+GQTVMK NARKVRRL G++I GF
Sbjct: 1 MTHPHAQSAAPWHGTTILSARNEGKVVVIGDGQVSMGQTVMKPNARKVRRLHDGSVIGGF 60
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AG++ADAFTL ERLE KLE++ QLLR++VELAKDWR DKYLRNLEAM+++AD+ +TLVI
Sbjct: 61 AGATADAFTLFERLEAKLERHNGQLLRAAVELAKDWRTDKYLRNLEAMMIVADREVTLVI 120
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEP G++AIGSGG++ALSAARAL + E +A+KAM++AA+ICVYTN
Sbjct: 121 TGNGDVLEPTGGIVAIGSGGNFALSAARALADYEKDPEVLAKKAMAVAAEICVYTNDQFT 180
Query: 182 LETLKVG 188
LET+++
Sbjct: 181 LETIEIQ 187
>gi|292486620|ref|YP_003529490.1| ATP-dependent protease HslV [Erwinia amylovora CFBP1430]
gi|292897855|ref|YP_003537224.1| ATP-dependent protease [Erwinia amylovora ATCC 49946]
gi|291197703|emb|CBJ44798.1| ATP-dependent protease (heat shock protein) [Erwinia amylovora ATCC
49946]
gi|291552037|emb|CBA19074.1| ATP-dependent protease HslV [Erwinia amylovora CFBP1430]
gi|312170683|emb|CBX78946.1| ATP-dependent protease HslV [Erwinia amylovora ATCC BAA-2158]
Length = 176
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 99/171 (57%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T A +I KA+ IA DIC+YTNHN+ +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTDIGARDIVEKALGIAGDICIYTNHNLTIEEL 172
>gi|221133924|ref|ZP_03560229.1| ATP-dependent protease peptidase subunit [Glaciecola sp. HTCC2999]
Length = 174
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 105/172 (61%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VV+AGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGNQVVMAGDGQVSLGNTVMKGNAKKVRRLYHDKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L R++VELAKDWR D+ LR LEA++ +AD T +LVITG GDV++PE ++
Sbjct: 62 ESKLEMHQGHLTRAAVELAKDWRTDRMLRKLEALLAVADHTASLVITGNGDVIQPEKDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG +A SAA AL+ +TQ SA++IA K+++IA DICVYTNH+ +ETL
Sbjct: 122 AIGSGGPFAQSAATALLDNTQLSAQDIATKSLTIAGDICVYTNHSQTVETLD 173
>gi|319405091|emb|CBI78695.1| heat shock protein [Bartonella sp. AR 15-3]
Length = 193
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 129/183 (70%), Positives = 152/183 (83%), Gaps = 1/183 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSS 65
+H M+ TTI+TVRK VV+AGDGQVSLGQT+MK+NARKVRRLGKG +IAGFAG++
Sbjct: 3 EHKPDIMYGTTIVTVRKGNKVVMAGDGQVSLGQTIMKSNARKVRRLGKGGAVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+AD+ TL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADQKATLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GVMAIGSGG++ALSAAR LM T AE IA KAMSIAA ICVYTN + +ETL
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARVLMDTDLDAETIACKAMSIAAKICVYTNDHFTIETL 182
Query: 186 KVG 188
Sbjct: 183 DAE 185
>gi|319789317|ref|YP_004150950.1| 20S proteasome A and B subunits [Thermovibrio ammonificans HB-1]
gi|317113819|gb|ADU96309.1| 20S proteasome A and B subunits [Thermovibrio ammonificans HB-1]
Length = 176
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 107/176 (60%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H TTI V +DG V +AGDGQV+LG TV K ARKVR+L G ++AGFAGS ADAF+
Sbjct: 1 MDFHGTTICAVLRDGKVAMAGDGQVTLGNTVFKNGARKVRKLYGGRVLAGFAGSVADAFS 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LLER E KL+ Y LL+S+VELAKDWR D+ LR LEAM+L+ADK+ L+I+G GDV+EP
Sbjct: 61 LLERFEDKLQTYGGNLLKSAVELAKDWRTDRILRRLEAMLLVADKSRILLISGNGDVIEP 120
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ VMA+GSGG YA +AA AL +T+ A EIARKA+ IA +IC+YTN NIV+E L
Sbjct: 121 DIPVMAVGSGGPYAQAAATALYQNTELPAAEIARKALEIAGNICIYTNTNIVVEEL 176
>gi|307292833|ref|ZP_07572679.1| 20S proteasome A and B subunits [Sphingobium chlorophenolicum L-1]
gi|306880899|gb|EFN12115.1| 20S proteasome A and B subunits [Sphingobium chlorophenolicum L-1]
Length = 180
Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats.
Identities = 117/176 (66%), Positives = 149/176 (84%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTI++VRK+G V++AGDGQVS+GQTVMK NARKVRRL G++I GFAG++ADAFTL
Sbjct: 4 WHGTTIMSVRKNGKVIVAGDGQVSMGQTVMKPNARKVRRLHDGSVIGGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++ QL+R++VELAKDWR DKYLRNLEAM+++ADK +TL++TG GDVLEP
Sbjct: 64 ERLEAKLERHNGQLMRAAVELAKDWRTDKYLRNLEAMMIVADKEVTLILTGNGDVLEPIG 123
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
GV AIGSGG++AL+AARAL+ + AE +ARKAM++AADICVYTN +V+E L+
Sbjct: 124 GVAAIGSGGNFALAAARALVEYEEDAETLARKAMAVAADICVYTNDQLVVEELESA 179
>gi|238786104|ref|ZP_04630060.1| ATP-dependent protease hslV [Yersinia bercovieri ATCC 43970]
gi|238712981|gb|EEQ05037.1| ATP-dependent protease hslV [Yersinia bercovieri ATCC 43970]
Length = 174
Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats.
Identities = 100/171 (58%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLDNTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|229593534|ref|YP_001454589.2| ATP-dependent protease peptidase subunit [Citrobacter koseri ATCC
BAA-895]
Length = 176
Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 172
>gi|123440505|ref|YP_001004499.1| ATP-dependent protease peptidase subunit [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|238750845|ref|ZP_04612343.1| ATP-dependent protease hslV [Yersinia rohdei ATCC 43380]
gi|166223006|sp|A1JI09|HSLV_YERE8 RecName: Full=ATP-dependent protease subunit HslV
gi|122087466|emb|CAL10247.1| heat shock protein [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|238710989|gb|EEQ03209.1| ATP-dependent protease hslV [Yersinia rohdei ATCC 43380]
Length = 174
Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats.
Identities = 100/171 (58%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|170738606|ref|YP_001767261.1| ATP-dependent protease peptidase subunit [Methylobacterium sp.
4-46]
gi|168192880|gb|ACA14827.1| 20S proteasome A and B subunits [Methylobacterium sp. 4-46]
Length = 176
Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats.
Identities = 120/176 (68%), Positives = 145/176 (82%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++ADAFTL
Sbjct: 1 MHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGAVIGGFAGATADAFTLF 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+AD+ + L+++G GDVLEPE
Sbjct: 61 ERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADREVGLLLSGSGDVLEPEG 120
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
GVMAIGSGG+YAL+AARAL AE I R++++IAA+ICVYTN N+V+E+L+
Sbjct: 121 GVMAIGSGGNYALAAARALEDQDLDAEAIVRRSLAIAAEICVYTNGNLVIESLEAA 176
>gi|251787765|ref|YP_003002486.1| ATP-dependent protease peptidase subunit [Dickeya zeae Ech1591]
gi|271502449|ref|YP_003335475.1| 20S proteasome A and subunit Bs [Dickeya dadantii Ech586]
gi|307128949|ref|YP_003880965.1| peptidase component of the HslUV protease [Dickeya dadantii 3937]
gi|247536386|gb|ACT05007.1| 20S proteasome A and B subunits [Dickeya zeae Ech1591]
gi|270346004|gb|ACZ78769.1| 20S proteasome A and B subunits [Dickeya dadantii Ech586]
gi|306526478|gb|ADM96408.1| peptidase component of the HslUV protease [Dickeya dadantii 3937]
Length = 176
Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats.
Identities = 99/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ SA EI K++ IA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIVEKSLGIAGDICIYTNQFHTIEEL 172
>gi|86747530|ref|YP_484026.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
palustris HaA2]
gi|86570558|gb|ABD05115.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodopseudomonas palustris HaA2]
Length = 187
Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats.
Identities = 128/185 (69%), Positives = 150/185 (81%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M + H TTILTVRK G VVI GDGQVS+GQTV+KANA+KVR+LGKG++I G
Sbjct: 1 MYSAAGESSPQIWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGG 60
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
FAG++ADAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV
Sbjct: 61 FAGATADAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLV 120
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
+TG GDVLEPE GVMAIGSGG+YAL+AARAL T AE I RKA+ IAADICVYTN N+
Sbjct: 121 LTGTGDVLEPEYGVMAIGSGGNYALAAARALADTDQDAETIVRKALDIAADICVYTNRNL 180
Query: 181 VLETL 185
LETL
Sbjct: 181 TLETL 185
>gi|27375760|ref|NP_767289.1| ATP-dependent protease peptidase subunit [Bradyrhizobium japonicum
USDA 110]
gi|47605692|sp|Q89WM9|HSLV_BRAJA RecName: Full=ATP-dependent protease subunit HslV
gi|27348898|dbj|BAC45914.1| ATP-dependent protease [Bradyrhizobium japonicum USDA 110]
Length = 186
Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats.
Identities = 122/186 (65%), Positives = 153/186 (82%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ + + H TTILTVRK G VVI GDGQVS+GQTV+K+NA+KVR+LG+G++I GFA
Sbjct: 1 MQDSQKSSPGWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNAKKVRKLGRGDVIGGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+T
Sbjct: 61 GATADAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLT 120
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
G GDVLEPE GVMAIGSGG+YAL+AARAL+ T AE I R+++ IAADICVYTN N+ +
Sbjct: 121 GTGDVLEPEAGVMAIGSGGNYALAAARALLDTDKDAETIVRRSLDIAADICVYTNRNVTI 180
Query: 183 ETLKVG 188
E+L G
Sbjct: 181 ESLATG 186
>gi|317401424|gb|EFV82057.1| ATP-dependent protease hslV [Achromobacter xylosoxidans C54]
Length = 179
Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats.
Identities = 99/175 (56%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ HATTI+ VR+ V + GDGQV+LG V+K ARK+RRL I+AGFAG++ADAFTL
Sbjct: 3 QFHATTIVCVRRGNRVALGGDGQVTLGNIVIKGTARKIRRLYHDKILAGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+++AD TLV+TG GDVLEPE
Sbjct: 63 QERFEAKLEKHQGNLMRAAVELTRDWRTDRVLRRLEAMLIVADAEHTLVLTGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YA SAA AL+ +T+ + E I ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELAPETIVKQSLEIAGDLCIYTNQNHVIETL 177
>gi|332308410|ref|YP_004436261.1| 20S proteasome A and B subunits [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332175739|gb|AEE24993.1| 20S proteasome A and B subunits [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 174
Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats.
Identities = 103/172 (59%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGNQVVIAGDGQVSLGNTVMKGNAKKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L R++VELAKDWR D+ LR LEA++ +AD+T + +ITG GDV++PEN ++
Sbjct: 62 ESKLEIHQGNLTRAAVELAKDWRTDRMLRKLEALLAVADETASFIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG +A SAA AL+ +T+ SAEEIA KA++IA +ICV+TNH+ +E +
Sbjct: 122 AIGSGGPFAQSAASALLDNTELSAEEIAEKALTIAGNICVFTNHSHTIEKID 173
>gi|188532280|ref|YP_001906077.1| ATP-dependent protease peptidase subunit [Erwinia tasmaniensis
Et1/99]
gi|238065875|sp|B2VF49|HSLV_ERWT9 RecName: Full=ATP-dependent protease subunit HslV
gi|188027322|emb|CAO95165.1| ATP-dependent protease HslV [Erwinia tasmaniensis Et1/99]
Length = 176
Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats.
Identities = 99/172 (57%), Positives = 132/172 (76%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA +AARAL+ +T A +I KA+ IA DIC+YTNHN+ +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTDIGARDIVEKALGIAGDICIYTNHNLTIEELS 173
>gi|114564916|ref|YP_752430.1| ATP-dependent protease peptidase subunit [Shewanella frigidimarina
NCIMB 400]
gi|122298446|sp|Q07WM3|HSLV_SHEFN RecName: Full=ATP-dependent protease subunit HslV
gi|114336209|gb|ABI73591.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella frigidimarina NCIMB 400]
Length = 174
Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats.
Identities = 105/172 (61%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + LL+S+VELAKDWR DK LR LEAM+++AD +L+ITG GDV++PE ++
Sbjct: 62 EAKLEMHQGHLLKSAVELAKDWRSDKMLRKLEAMLVVADTESSLIITGNGDVVQPEYDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG+YA ++A AL+ +T+ SAEEIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNYAHASALALLQNTELSAEEIAEKSLTIAGDICVFTNQFKTIEKLD 173
>gi|325291498|ref|YP_004277362.1| heat shock protein HslV [Agrobacterium sp. H13-3]
gi|325059351|gb|ADY63042.1| heat shock protein HslV [Agrobacterium sp. H13-3]
Length = 174
Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats.
Identities = 132/173 (76%), Positives = 155/173 (89%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLL+RL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLDRL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G +
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGAI 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG+YA +AARA+M T SAEE+ARK++ IAADICVYTNHN+V+ETL
Sbjct: 122 AIGSGGNYAFAAARAMMDTDKSAEEVARKSLDIAADICVYTNHNLVIETLDAE 174
>gi|127511309|ref|YP_001092506.1| ATP-dependent protease peptidase subunit [Shewanella loihica PV-4]
gi|166223000|sp|A3Q9U9|HSLV_SHELP RecName: Full=ATP-dependent protease subunit HslV
gi|126636604|gb|ABO22247.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella loihica PV-4]
Length = 174
Score = 291 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L+R++VE+AKDWR D+ LR LEA++ +AD +L+ITG GDV++PEN ++
Sbjct: 62 ESKLEMHQGHLMRAAVEMAKDWRSDRVLRKLEALLAVADTECSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A +AA AL+ +T SA+EIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNFAQAAATALLENTDLSAKEIAEKSLTIAGDICVFTNQFKTIEEL 172
>gi|254284434|ref|ZP_04959402.1| heat shock protein HslV [gamma proteobacterium NOR51-B]
gi|219680637|gb|EED36986.1| heat shock protein HslV [gamma proteobacterium NOR51-B]
Length = 178
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 105/176 (59%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+DG+V I GDGQVS+G TVMK NARKVRRL + +IAGFAG +ADAFTL
Sbjct: 3 QYHGTTIVSVRRDGIVAIGGDGQVSMGNTVMKGNARKVRRLFRDQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E +LE+Y QL R++VELAK WR ++ LR LEA++ +AD+ +L+ITG GDV+EPE
Sbjct: 63 FELFEAQLEKYQGQLTRAAVELAKLWRSERSLRRLEALLAVADRETSLIITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ ++AIGSGG YA +AARAL+ +T+ AE I RK ++IA DICV+TNHN +ETL
Sbjct: 123 DNLIAIGSGGPYAQAAARALLDNTELGAEAIVRKGLTIAGDICVFTNHNHTIETLD 178
>gi|212703173|ref|ZP_03311301.1| hypothetical protein DESPIG_01215 [Desulfovibrio piger ATCC 29098]
gi|212673439|gb|EEB33922.1| hypothetical protein DESPIG_01215 [Desulfovibrio piger ATCC 29098]
Length = 178
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 105/177 (59%), Positives = 136/177 (76%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
++ HATTIL V+KDG V +AGDGQV+LGQ +MK ARKVRRL G I+AGFAG++ADAF
Sbjct: 2 IETHATTILAVKKDGQVAMAGDGQVTLGQSMIMKHTARKVRRLYDGKIVAGFAGATADAF 61
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E E KL+++ L RS+VEL K+WR DKYLR LEAM+L++D L+++G GDV E
Sbjct: 62 TLFELFEAKLKEFRGNLQRSAVELTKEWRKDKYLRRLEAMLLVSDGEHILLLSGNGDVFE 121
Query: 130 PENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ V AIGSGG YALSAARAL+ + A E+A ++M IA++ICVYTN + V+ETL
Sbjct: 122 PDDDVAAIGSGGPYALSAARALLRHSTLPARELALESMKIASEICVYTNDHFVVETL 178
>gi|332159731|ref|YP_004296308.1| ATP-dependent protease peptidase subunit [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|318603862|emb|CBY25360.1| ATP-dependent protease HslV [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325663961|gb|ADZ40605.1| ATP-dependent protease peptidase subunit [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
Length = 174
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL IIAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNDKIIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|238754733|ref|ZP_04616085.1| ATP-dependent protease hslV [Yersinia ruckeri ATCC 29473]
gi|238707041|gb|EEP99406.1| ATP-dependent protease hslV [Yersinia ruckeri ATCC 29473]
Length = 176
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 100/171 (58%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|238798293|ref|ZP_04641777.1| ATP-dependent protease hslV [Yersinia mollaretii ATCC 43969]
gi|238717840|gb|EEQ09672.1| ATP-dependent protease hslV [Yersinia mollaretii ATCC 43969]
Length = 176
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 100/171 (58%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNQVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLDNTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|258544136|ref|ZP_05704370.1| ATP-dependent protease HslV [Cardiobacterium hominis ATCC 15826]
gi|258520644|gb|EEV89503.1| ATP-dependent protease HslV [Cardiobacterium hominis ATCC 15826]
Length = 179
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 113/174 (64%), Positives = 141/174 (81%), Gaps = 1/174 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H+TTIL+VR+ V IAGDGQVSLG T+MK NARK+RRL K I+AGFAG +ADAFTL E
Sbjct: 5 HSTTILSVRRGRHVAIAGDGQVSLGNTIMKGNARKIRRLYKNRILAGFAGGTADAFTLFE 64
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
R E KLE+ QLLR++VELAKDWR D+ LR LEAM+++AD+T TL+++G GDV+EPE+
Sbjct: 65 RFEGKLEEQDGQLLRAAVELAKDWRTDRMLRRLEAMLIVADETSTLILSGNGDVVEPEDS 124
Query: 134 VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ AIGSGG YALSAARAL +T+ A IARK++ IA+DICVYTNHNI+ + LK
Sbjct: 125 IAAIGSGGMYALSAARALYHNTEMDALTIARKSLEIASDICVYTNHNIITDELK 178
>gi|259906820|ref|YP_002647176.1| ATP-dependent protease peptidase subunit [Erwinia pyrifoliae
Ep1/96]
gi|224962442|emb|CAX53897.1| ATP-dependent protease HslV [Erwinia pyrifoliae Ep1/96]
gi|283476607|emb|CAY72435.1| ATP-dependent protease HslV [Erwinia pyrifoliae DSM 12163]
gi|310766032|gb|ADP10982.1| ATP-dependent protease peptidase subunit [Erwinia sp. Ejp617]
Length = 176
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 98/171 (57%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T A +I KA+ IA DIC+YTNH++ +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTDIGARDIVEKALGIAGDICIYTNHHLTIEEL 172
>gi|149925903|ref|ZP_01914166.1| ATP-dependent protease peptidase subunit [Limnobacter sp. MED105]
gi|149825191|gb|EDM84402.1| ATP-dependent protease peptidase subunit [Limnobacter sp. MED105]
Length = 187
Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats.
Identities = 97/179 (54%), Positives = 135/179 (75%), Gaps = 1/179 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG V+K +ARKVRRL I+AGFAG +ADAFTL
Sbjct: 3 QYHGTTILSVRRGKHVALGGDGQVTLGHIVVKGSARKVRRLHHNKILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E +LE++ LLR++VELAK+WR D+ LR LEAM+ +AD+ +L+ITG GDVLEPE
Sbjct: 63 FEHFEAQLEKHQGHLLRAAVELAKEWRTDRMLRRLEAMLAVADENHSLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
G++AIGSGG+YA SAA+AL+ +T+ EEI +K+++IA ++C+YTN + +E L +
Sbjct: 123 QGLVAIGSGGAYAHSAAKALLENTELLPEEIVKKSLTIAGELCIYTNQHHTIEVLGAPE 181
>gi|242241191|ref|YP_002989372.1| ATP-dependent protease peptidase subunit [Dickeya dadantii Ech703]
gi|242133248|gb|ACS87550.1| 20S proteasome A and B subunits [Dickeya dadantii Ech703]
Length = 176
Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats.
Identities = 100/171 (58%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ SA EI KA+ IA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIVEKALGIAGDICIYTNQFHTIEEL 172
>gi|238760314|ref|ZP_04621456.1| ATP-dependent protease hslV [Yersinia aldovae ATCC 35236]
gi|238701442|gb|EEP94017.1| ATP-dependent protease hslV [Yersinia aldovae ATCC 35236]
Length = 176
Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NARKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNARKVRRLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVIQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T A++I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTDLGAKDIVEKSLSIAGDICIYTNRTQTIEEL 172
>gi|86355716|ref|YP_467608.1| ATP-dependent protease peptidase subunit [Rhizobium etli CFN 42]
gi|123513488|sp|Q2KE55|HSLV_RHIEC RecName: Full=ATP-dependent protease subunit HslV
gi|86279818|gb|ABC88881.1| heat shock protease HslVU, subunit HslV protein [Rhizobium etli CFN
42]
Length = 175
Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats.
Identities = 135/173 (78%), Positives = 155/173 (89%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG++IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGDVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG++A +AARALM T AEEIAR+A+ IAADICVYTNHNIV+E L V
Sbjct: 122 AIGSGGNFAFAAARALMDTDKPAEEIARRALDIAADICVYTNHNIVVELLDVE 174
>gi|304398971|ref|ZP_07380840.1| 20S proteasome A and B subunits [Pantoea sp. aB]
gi|308188607|ref|YP_003932738.1| ATP-dependent protease HslV (heat shock protein) [Pantoea vagans
C9-1]
gi|304353431|gb|EFM17809.1| 20S proteasome A and B subunits [Pantoea sp. aB]
gi|308059117|gb|ADO11289.1| ATP-dependent protease HslV (heat shock protein) [Pantoea vagans
C9-1]
Length = 176
Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats.
Identities = 96/171 (56%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD++ +L+I+G GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADESASLIISGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG +A +AARAL+ +T+ A +I K+++IA DIC+YTNHN+ E L
Sbjct: 122 AIGSGGPFAQAAARALLENTEMGARDIVEKSLNIAGDICIYTNHNVNFEEL 172
>gi|56476922|ref|YP_158511.1| ATP-dependent protease peptidase subunit [Aromatoleum aromaticum
EbN1]
gi|81598845|sp|Q5P502|HSLV_AZOSE RecName: Full=ATP-dependent protease subunit HslV
gi|56312965|emb|CAI07610.1| putative heat shock protein [Aromatoleum aromaticum EbN1]
Length = 179
Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats.
Identities = 104/176 (59%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG V+KA ARKVR + +G I+AGFAG +ADAFTL
Sbjct: 3 QYHGTTILSVRRGRRVALGGDGQVTLGNVVIKATARKVRPIYQGRILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLE++ +LRS+VELAKDWR D+ LR LEAM+ +AD +LVITG GDVLEPE
Sbjct: 63 FERFEAKLEKHQGNVLRSAVELAKDWRTDRMLRRLEAMLAVADPDNSLVITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G++AIGSGG+YA SAARAL+ +T EEI +K++ IA D+C+YTN + V+E L+
Sbjct: 123 QGIVAIGSGGAYAQSAARALLENTALPPEEIVKKSLQIAGDLCIYTNQSHVIEVLE 178
>gi|22124213|ref|NP_667636.1| ATP-dependent protease peptidase subunit [Yersinia pestis KIM 10]
gi|45439971|ref|NP_991510.1| ATP-dependent protease peptidase subunit [Yersinia pestis biovar
Microtus str. 91001]
gi|51594456|ref|YP_068647.1| ATP-dependent protease peptidase subunit [Yersinia
pseudotuberculosis IP 32953]
gi|108806254|ref|YP_650170.1| ATP-dependent protease peptidase subunit [Yersinia pestis Antiqua]
gi|108813907|ref|YP_649674.1| ATP-dependent protease peptidase subunit [Yersinia pestis Nepal516]
gi|145601042|ref|YP_001165118.1| ATP-dependent protease peptidase subunit [Yersinia pestis Pestoides
F]
gi|150260793|ref|ZP_01917521.1| heat shock protein [Yersinia pestis CA88-4125]
gi|153950787|ref|YP_001399113.1| ATP-dependent protease peptidase subunit [Yersinia
pseudotuberculosis IP 31758]
gi|162418923|ref|YP_001604749.1| ATP-dependent protease peptidase subunit [Yersinia pestis Angola]
gi|165928393|ref|ZP_02224225.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165936313|ref|ZP_02224882.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011508|ref|ZP_02232406.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213703|ref|ZP_02239738.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167402505|ref|ZP_02307959.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419142|ref|ZP_02310895.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425892|ref|ZP_02317645.1| ATP-dependent protease HslV [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167469786|ref|ZP_02334490.1| ATP-dependent protease HslV [Yersinia pestis FV-1]
gi|170026310|ref|YP_001722815.1| ATP-dependent protease peptidase subunit [Yersinia
pseudotuberculosis YPIII]
gi|186893444|ref|YP_001870556.1| ATP-dependent protease peptidase subunit [Yersinia
pseudotuberculosis PB1/+]
gi|218927321|ref|YP_002345196.1| ATP-dependent protease peptidase subunit [Yersinia pestis CO92]
gi|229836220|ref|ZP_04456388.1| peptidase component of the HslUV protease [Yersinia pestis
Pestoides A]
gi|229839959|ref|ZP_04460118.1| peptidase component of the HslUV protease [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842041|ref|ZP_04462196.1| peptidase component of the HslUV protease [Yersinia pestis biovar
Orientalis str. India 195]
gi|229904433|ref|ZP_04519544.1| peptidase component of the HslUV protease [Yersinia pestis
Nepal516]
gi|270488705|ref|ZP_06205779.1| ATP-dependent protease HslVU, peptidase subunit [Yersinia pestis
KIM D27]
gi|294502202|ref|YP_003566264.1| ATP-dependent protease peptidase subunit [Yersinia pestis Z176003]
gi|21759179|sp|Q8ZJJ4|HSLV_YERPE RecName: Full=ATP-dependent protease subunit HslV
gi|85542208|sp|Q66G84|HSLV_YERPS RecName: Full=ATP-dependent protease subunit HslV
gi|122979804|sp|Q1CBE7|HSLV_YERPA RecName: Full=ATP-dependent protease subunit HslV
gi|122979888|sp|Q1CD56|HSLV_YERPN RecName: Full=ATP-dependent protease subunit HslV
gi|166223007|sp|A4TS83|HSLV_YERPP RecName: Full=ATP-dependent protease subunit HslV
gi|166918424|sp|A7FCY5|HSLV_YERP3 RecName: Full=ATP-dependent protease subunit HslV
gi|238065952|sp|B2JZC6|HSLV_YERPB RecName: Full=ATP-dependent protease subunit HslV
gi|238065953|sp|B1JQ75|HSLV_YERPY RecName: Full=ATP-dependent protease subunit HslV
gi|238687320|sp|A9R6C8|HSLV_YERPG RecName: Full=ATP-dependent protease subunit HslV
gi|21956974|gb|AAM83887.1|AE013628_10 heat shock protein, proteasome-related peptidase subunit [Yersinia
pestis KIM 10]
gi|45434826|gb|AAS60387.1| heat shock protein [Yersinia pestis biovar Microtus str. 91001]
gi|51587738|emb|CAH19338.1| heat shock protein [Yersinia pseudotuberculosis IP 32953]
gi|108777555|gb|ABG20074.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Yersinia pestis Nepal516]
gi|108778167|gb|ABG12225.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Yersinia pestis Antiqua]
gi|115345932|emb|CAL18794.1| heat shock protein [Yersinia pestis CO92]
gi|145212738|gb|ABP42145.1| heat shock protein [Yersinia pestis Pestoides F]
gi|149290201|gb|EDM40278.1| heat shock protein [Yersinia pestis CA88-4125]
gi|152962282|gb|ABS49743.1| ATP-dependent protease HslV [Yersinia pseudotuberculosis IP 31758]
gi|162351738|gb|ABX85686.1| ATP-dependent protease HslV [Yersinia pestis Angola]
gi|165915927|gb|EDR34535.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
IP275]
gi|165919575|gb|EDR36908.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989654|gb|EDR41955.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205105|gb|EDR49585.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166963136|gb|EDR59157.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048121|gb|EDR59529.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167055040|gb|EDR64839.1| ATP-dependent protease HslV [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169752844|gb|ACA70362.1| 20S proteasome A and B subunits [Yersinia pseudotuberculosis YPIII]
gi|186696470|gb|ACC87099.1| 20S proteasome A and B subunits [Yersinia pseudotuberculosis PB1/+]
gi|229678551|gb|EEO74656.1| peptidase component of the HslUV protease [Yersinia pestis
Nepal516]
gi|229690351|gb|EEO82405.1| peptidase component of the HslUV protease [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696325|gb|EEO86372.1| peptidase component of the HslUV protease [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706668|gb|EEO92674.1| peptidase component of the HslUV protease [Yersinia pestis
Pestoides A]
gi|262360281|gb|ACY57002.1| ATP-dependent protease peptidase subunit [Yersinia pestis D106004]
gi|262364228|gb|ACY60785.1| ATP-dependent protease peptidase subunit [Yersinia pestis D182038]
gi|270337209|gb|EFA47986.1| ATP-dependent protease HslVU, peptidase subunit [Yersinia pestis
KIM D27]
gi|294352661|gb|ADE63002.1| ATP-dependent protease peptidase subunit [Yersinia pestis Z176003]
gi|320013459|gb|ADV97030.1| peptidase component of the HslUV protease [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 174
Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+DG VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRDGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|91974896|ref|YP_567555.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
palustris BisB5]
gi|91681352|gb|ABE37654.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodopseudomonas palustris BisB5]
Length = 193
Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats.
Identities = 127/175 (72%), Positives = 148/175 (84%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTILTVRK G VVI GDGQVS+GQTV+KANA+KVR+LGKG++I GFAG++ADAFTL
Sbjct: 19 WHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAFTLF 78
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVLEPE
Sbjct: 79 ERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPEY 138
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
GVMAIGSGG+YAL+AARAL T AE I RKA+ IAADICVYTN N+ LETL
Sbjct: 139 GVMAIGSGGNYALAAARALADTDQDAETIVRKALDIAADICVYTNRNLTLETLSA 193
>gi|237728046|ref|ZP_04558527.1| heat shock protein [Citrobacter sp. 30_2]
gi|226910303|gb|EEH96221.1| heat shock protein [Citrobacter sp. 30_2]
Length = 176
Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 172
>gi|329894772|ref|ZP_08270573.1| ATP-dependent protease HslV [gamma proteobacterium IMCC3088]
gi|328922761|gb|EGG30094.1| ATP-dependent protease HslV [gamma proteobacterium IMCC3088]
Length = 179
Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats.
Identities = 101/176 (57%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI+ VR+D VVIAGDGQVS+G TVMK NARKVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QFRGTTIVCVRRDNQVVIAGDGQVSMGNTVMKGNARKVRRLYKDQVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E +L+++ L+R++V LAK WR ++ LR LEA++ +ADK +LVI+G GDV+EPE
Sbjct: 63 FELFEAQLDKHHGHLVRAAVALAKAWRTERSLRQLEALLAVADKETSLVISGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N ++AIGSGG +A SAARAL+ +T+ SA ++A KA++IA DIC+YTNH+ +E +
Sbjct: 123 NNLIAIGSGGPFAQSAARALLDNTELSAHDVATKALTIAGDICIYTNHHHTVEIID 178
>gi|229007174|ref|NP_353083.3| ATP-dependent protease peptidase subunit [Agrobacterium tumefaciens
str. C58]
gi|21759163|sp|Q8UJ88|HSLV_AGRT5 RecName: Full=ATP-dependent protease subunit HslV
Length = 174
Score = 290 bits (744), Expect = 4e-77, Method: Composition-based stats.
Identities = 131/173 (75%), Positives = 155/173 (89%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLL+RL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLDRL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G +
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGAI 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG+YA +AARA+M T SAEE+AR+++ IAADICVYTNHN+V+ETL
Sbjct: 122 AIGSGGNYAFAAARAMMDTDKSAEEVARQSLDIAADICVYTNHNLVVETLDAE 174
>gi|145636238|ref|ZP_01791907.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittHH]
gi|148825227|ref|YP_001289980.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittEE]
gi|229846581|ref|ZP_04466689.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
7P49H1]
gi|166222978|sp|A5U9Z6|HSLV_HAEIE RecName: Full=ATP-dependent protease subunit HslV
gi|145270403|gb|EDK10337.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittHH]
gi|148715387|gb|ABQ97597.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
PittEE]
gi|229810674|gb|EEP46392.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
7P49H1]
gi|309972351|gb|ADO95552.1| Protease HslVU, peptidase subunit [Haemophilus influenzae R2846]
Length = 175
Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats.
Identities = 106/172 (61%), Positives = 137/172 (79%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRKGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-V 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YALSAARAL+ +T+ SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL 173
>gi|87122851|ref|ZP_01078721.1| heat shock protein HslV [Marinomonas sp. MED121]
gi|86161862|gb|EAQ63157.1| heat shock protein HslV [Marinomonas sp. MED121]
Length = 185
Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats.
Identities = 106/176 (60%), Positives = 140/176 (79%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTILTVRK VV+ GDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTILTVRKGNQVVVGGDGQVSLGNTVMKGNARKVRRLYHNEVVAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE+Y L+R++VELAKDWR DK LR LEAM+++A+K TL+ITG GDV+EPE+G +
Sbjct: 62 EGQLEKYQGDLVRAAVELAKDWRSDKALRKLEAMLIVANKQSTLIITGNGDVVEPEHGAL 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG+YA ++ARAL+ +T A++I K++ IAADICV+TNH++ +E++ + +
Sbjct: 122 AIGSGGNYAEASARALIDNTDLKAQDIVEKSLKIAADICVFTNHSLTVESITIDPQ 177
>gi|288959725|ref|YP_003450066.1| ATP-dependent HslUV protease, peptidase subunit [Azospirillum sp.
B510]
gi|288912033|dbj|BAI73522.1| ATP-dependent HslUV protease, peptidase subunit [Azospirillum sp.
B510]
Length = 221
Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats.
Identities = 122/182 (67%), Positives = 147/182 (80%), Gaps = 1/182 (0%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
+ H ++ H TTIL+VRK+G VVIAGDGQVS+G TVMKANARKVR L G ++AGFAG+
Sbjct: 40 SNPHDPIQWHGTTILSVRKNGQVVIAGDGQVSVGPTVMKANARKVRWLAGGTVMAGFAGA 99
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
+ADA TL ERLE KLEQYP QL R+ VE+AKDWR D+YLR LEAM+ +ADK+++LV+TG
Sbjct: 100 TADAMTLFERLEGKLEQYPGQLTRACVEMAKDWRTDRYLRRLEAMMAVADKSVSLVLTGN 159
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE+G++ IGSGGSYALSAARAL+ AE +ARKAM IAA ICVYTN N+ LE
Sbjct: 160 GDVLEPEDGLIGIGSGGSYALSAARALIDIDGMEAEAVARKAMKIAAGICVYTNENVTLE 219
Query: 184 TL 185
L
Sbjct: 220 KL 221
>gi|152972727|ref|YP_001337873.1| ATP-dependent protease peptidase subunit [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|206579620|ref|YP_002241199.1| ATP-dependent protease HslV [Klebsiella pneumoniae 342]
gi|238892335|ref|YP_002917069.1| ATP-dependent protease peptidase subunit [Klebsiella pneumoniae
NTUH-K2044]
gi|288937835|ref|YP_003441894.1| 20S proteasome A and subunit betas [Klebsiella variicola At-22]
gi|290513061|ref|ZP_06552424.1| ATP-dependent protease hslV [Klebsiella sp. 1_1_55]
gi|166222982|sp|A6TGC2|HSLV_KLEP7 RecName: Full=ATP-dependent protease subunit HslV
gi|238065880|sp|B5XZ36|HSLV_KLEP3 RecName: Full=ATP-dependent protease subunit HslV
gi|150957576|gb|ABR79606.1| ATP-dependent protease peptidase subunit [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|206568678|gb|ACI10454.1| ATP-dependent protease HslV [Klebsiella pneumoniae 342]
gi|238544651|dbj|BAH61002.1| ATP-dependent protease peptidase subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|288892544|gb|ADC60862.1| 20S proteasome A and B subunits [Klebsiella variicola At-22]
gi|289774443|gb|EFD82448.1| ATP-dependent protease hslV [Klebsiella sp. 1_1_55]
Length = 176
Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats.
Identities = 100/171 (58%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T A +IA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTDMGARDIAEKALDIAGDICIYTNHFHTIEEL 172
>gi|90420976|ref|ZP_01228880.1| heat shock protein HslV [Aurantimonas manganoxydans SI85-9A1]
gi|90334754|gb|EAS48530.1| heat shock protein HslV [Aurantimonas manganoxydans SI85-9A1]
Length = 194
Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats.
Identities = 126/185 (68%), Positives = 156/185 (84%), Gaps = 1/185 (0%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGF 61
+ + H ++ TTI+TVRK G VVIAGDGQVSLG TVMK NARKVRR+GK G++IAGF
Sbjct: 7 MSMENHDPATIYGTTIVTVRKGGKVVIAGDGQVSLGNTVMKGNARKVRRIGKKGDVIAGF 66
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AG++ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+++AD+ +TL +
Sbjct: 67 AGATADAFTLLERLEAKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMIVADRQVTLTL 126
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+GV+AIGSGG+YAL+AARAL T AEEIAR+AM IA +IC+YTN N+V
Sbjct: 127 TGNGDVLEPEHGVIAIGSGGNYALAAARALADTDYDAEEIARRAMKIAGEICIYTNDNVV 186
Query: 182 LETLK 186
+E+L
Sbjct: 187 VESLD 191
>gi|254482630|ref|ZP_05095868.1| peptidase, T1 family [marine gamma proteobacterium HTCC2148]
gi|214036989|gb|EEB77658.1| peptidase, T1 family [marine gamma proteobacterium HTCC2148]
Length = 179
Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats.
Identities = 100/175 (57%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR+ VVI GDGQVS+G TVMK NARKVRRL K +IAGFAG +ADAFTL
Sbjct: 3 QYRGTTILSVRRGNSVVIGGDGQVSMGNTVMKGNARKVRRLYKDRVIAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E +L+++ L+R++VELAK WR ++ LR LEA++ +ADK +LVITG GDV+EPE
Sbjct: 63 FELFEAQLDKHQGHLVRAAVELAKAWRTERALRQLEALLAVADKETSLVITGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG +A SAARAL+ +T+ A + K ++IA DIC+YTNHN +E L
Sbjct: 123 DNLIAIGSGGPFAQSAARALLDNTELDARSVVEKGLAIAGDICIYTNHNRTIEEL 177
>gi|49473862|ref|YP_031904.1| ATP-dependent protease peptidase subunit [Bartonella quintana str.
Toulouse]
gi|85542197|sp|Q6G0Q0|HSLV_BARQU RecName: Full=ATP-dependent protease subunit HslV
gi|49239365|emb|CAF25698.1| Heat shock protein hslV [Bartonella quintana str. Toulouse]
Length = 193
Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats.
Identities = 129/183 (70%), Positives = 151/183 (82%), Gaps = 1/183 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSS 65
+H M+ TTI+TVRK G VVIAGDGQVS GQT+MK NARKVRRLGK G +IAGFAG++
Sbjct: 3 EHKPDIMYGTTIITVRKGGKVVIAGDGQVSFGQTIMKGNARKVRRLGKSGTVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK ITL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKITLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+G+MAIGSGG++ALSAA AL+ AE IARKAM IAA ICVYTN + +ETL
Sbjct: 123 DVLEPEDGIMAIGSGGNFALSAAWALVDMNLDAETIARKAMDIAAKICVYTNDHFTIETL 182
Query: 186 KVG 188
Sbjct: 183 DAE 185
>gi|255659257|ref|ZP_05404666.1| ATP-dependent protease HslVU, peptidase subunit [Mitsuokella
multacida DSM 20544]
gi|260848712|gb|EEX68719.1| ATP-dependent protease HslVU, peptidase subunit [Mitsuokella
multacida DSM 20544]
Length = 182
Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats.
Identities = 106/178 (59%), Positives = 136/178 (76%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
++ HATTI VRK+G IAGDGQV+ G T+MK+ ARKVRR+ G ++AGFAGS ADAF
Sbjct: 5 LQFHATTICAVRKNGKTAIAGDGQVTFGQNTIMKSTARKVRRIYHGRVLAGFAGSVADAF 64
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE Y L R++VELAK+WR DK + LEA++L+ADK L+++G G+V+E
Sbjct: 65 TLFEKFEAKLETYNGNLQRAAVELAKEWRTDKMMGKLEALLLVADKDTLLMLSGNGEVIE 124
Query: 130 PENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P+ V AIGSGG +ALSAARAL+ T A+EIA++A+SIAADICVYTNHNI +E L
Sbjct: 125 PDGDVAAIGSGGFFALSAARALVKHTDMEAKEIAKEALSIAADICVYTNHNIRVEELD 182
>gi|239813915|ref|YP_002942825.1| ATP-dependent protease peptidase subunit [Variovorax paradoxus
S110]
gi|259491400|sp|C5CNE3|HSLV_VARPS RecName: Full=ATP-dependent protease subunit HslV
gi|239800492|gb|ACS17559.1| 20S proteasome A and B subunits [Variovorax paradoxus S110]
Length = 181
Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats.
Identities = 103/179 (57%), Positives = 137/179 (76%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTI++VR+ V I GDGQV+LG V+K ARKVRRL G ++AGFAG++AD
Sbjct: 3 QFHGTTIVSVRRKTPQGDQVAIGGDGQVTLGNIVIKGTARKVRRLYHGKVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ L R++VEL KDWR D+ LR LEAM+ +AD T +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGHLTRAAVELTKDWRTDRVLRKLEAMLAVADATTSLIITGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE+GV+AIGSGG+YA SAA+AL+ +T+ +AE+I RK+++IA +IC+YTN N +E L
Sbjct: 123 LEPEDGVIAIGSGGAYAQSAAKALIDNTELTAEQIVRKSLAIAGEICIYTNMNHTVEAL 181
>gi|315497793|ref|YP_004086597.1| 20S proteasome a and b subunits [Asticcacaulis excentricus CB 48]
gi|315415805|gb|ADU12446.1| 20S proteasome A and B subunits [Asticcacaulis excentricus CB 48]
Length = 183
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 120/184 (65%), Positives = 145/184 (78%), Gaps = 1/184 (0%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M DK++ H TTI+ VRK+G VIAGDGQVS+G T++K A+KVR L G +I GFAG
Sbjct: 1 MTDKNFP-NWHGTTIVAVRKNGKTVIAGDGQVSMGPTIVKGGAKKVRTLAGGKVIVGFAG 59
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTLLERLE KLE YP+QL R+ V+LAKDWR D+YLR LEAM+L+ DK L ITG
Sbjct: 60 ATADAFTLLERLEAKLELYPDQLARACVDLAKDWRTDRYLRRLEAMLLVGDKNHILTITG 119
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
+GDVLEPE+GV AIGSGG+YALSAARAL+ + AE IARKAM IA DICVYTNH++ LE
Sbjct: 120 VGDVLEPEDGVAAIGSGGTYALSAARALLEYEPDAEIIARKAMQIAGDICVYTNHSVTLE 179
Query: 184 TLKV 187
L+
Sbjct: 180 KLEA 183
>gi|254448912|ref|ZP_05062367.1| ATP-dependent protease HslV [gamma proteobacterium HTCC5015]
gi|198261449|gb|EDY85739.1| ATP-dependent protease HslV [gamma proteobacterium HTCC5015]
Length = 177
Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats.
Identities = 101/174 (58%), Positives = 133/174 (76%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TTIL V++ VVI GDGQVS+G TVMK NARKVRRL G ++AGFAG++ADAFTL
Sbjct: 4 LHGTTILGVQRGDDVVIGGDGQVSMGNTVMKGNARKVRRLYGGRVLAGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E KLEQ+ L R++VELAKDWR DK LRNLEA++++ + LVI+G GDV+EPE+
Sbjct: 64 EKFEGKLEQHNGNLTRAAVELAKDWRTDKVLRNLEALLIVGSQEGLLVISGNGDVIEPED 123
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG +A SAA+AL +T+ A E+ +++ IA DICV+TNHN+ +E L
Sbjct: 124 SFIAIGSGGQFAQSAAKALYENTELGAREVVERSLHIAGDICVFTNHNLTIEEL 177
>gi|260595966|ref|YP_003208537.1| ATP-dependent protease subunit HslV [Cronobacter turicensis z3032]
gi|260215143|emb|CBA26939.1| ATP-dependent protease hslV [Cronobacter turicensis z3032]
Length = 176
Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats.
Identities = 97/171 (56%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A +I K++ IA DIC+YTNH + +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGARDIVEKSLGIAGDICIYTNHFLTIEEL 172
>gi|134096122|ref|YP_001101197.1| ATP-dependent protease peptidase subunit [Herminiimonas
arsenicoxydans]
gi|166222980|sp|A4G989|HSLV_HERAR RecName: Full=ATP-dependent protease subunit HslV
gi|133740025|emb|CAL63076.1| ATP-dependent protease HslV [Herminiimonas arsenicoxydans]
Length = 178
Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats.
Identities = 103/176 (58%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ VV + GDGQV+LG VMK ARKVR++ G ++ GFAG +ADAFTL
Sbjct: 3 QFHGTTILSVRRGNVVALGGDGQVTLGNIVMKGTARKVRKVYSGKVLVGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LER E KLE++ L+R+SVELAKDWR D+ LR LEAM+L+AD TLVITG GDVLEP
Sbjct: 63 LERFESKLEKHQGHLMRASVELAKDWRTDRMLRRLEAMLLVADHETTLVITGNGDVLEPN 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G+ AIGSGG+YA SAA+AL +T+ S EI +K+++IA ++C+YTN + +ETL
Sbjct: 123 DGIGAIGSGGTYAQSAAKALQENTELSPLEIVKKSLTIAGELCIYTNLSHTIETLD 178
>gi|114706594|ref|ZP_01439495.1| ATP-dependent protease peptidase subunit [Fulvimarina pelagi
HTCC2506]
gi|114537986|gb|EAU41109.1| ATP-dependent protease peptidase subunit [Fulvimarina pelagi
HTCC2506]
Length = 185
Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats.
Identities = 127/184 (69%), Positives = 160/184 (86%), Gaps = 1/184 (0%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFA 62
M D H +M+ TTI+TVRK+G VV+AGDGQVSLG T++K NARKVRR+GK G +IAGFA
Sbjct: 1 MMDSHKPDQMYGTTIVTVRKNGSVVVAGDGQVSLGNTMIKGNARKVRRIGKQGQVIAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+++ADKT+TL +T
Sbjct: 61 GATADAFTLLERLEGKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMIVADKTVTLTLT 120
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
G GDVLEPE GVMAIGSGG+YAL+AA+AL T+ SAEEIAR+AM IA++IC+YTN +I++
Sbjct: 121 GNGDVLEPEEGVMAIGSGGNYALAAAKALAETEYSAEEIARRAMKIASEICIYTNDSIIV 180
Query: 183 ETLK 186
E ++
Sbjct: 181 EKIE 184
>gi|317050063|ref|YP_004117711.1| 20S proteasome subunits A/B [Pantoea sp. At-9b]
gi|316951680|gb|ADU71155.1| 20S proteasome A and B subunits [Pantoea sp. At-9b]
Length = 195
Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats.
Identities = 98/171 (57%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 21 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 80
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD++ +L+I+G GDV++PEN ++
Sbjct: 81 ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADESASLIISGNGDVIQPENDLI 140
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A++I KA+ IA DIC+YTNHN+ E L
Sbjct: 141 AIGSGGPYAQAAARALLENTELGAKDIVAKALDIAGDICIYTNHNVNFEEL 191
>gi|104783981|ref|YP_610479.1| ATP-dependent protease peptidase subunit [Pseudomonas entomophila
L48]
gi|122401538|sp|Q1I3U0|HSLV_PSEE4 RecName: Full=ATP-dependent protease subunit HslV
gi|95112968|emb|CAK17696.1| peptidase component of the HslUV protease [Pseudomonas entomophila
L48]
Length = 176
Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats.
Identities = 101/175 (57%), Positives = 139/175 (79%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYNGQVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +L+++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EAQLQKHSGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+GSGG YA +AARAL++ T SA EI A++IA DICV+TNHN+ +E + +
Sbjct: 122 AMGSGGGYAQAAARALLNKTDLSAREITEAALNIAGDICVFTNHNLTIEEQDLAE 176
>gi|119773581|ref|YP_926321.1| ATP-dependent protease peptidase subunit [Shewanella amazonensis
SB2B]
gi|166222997|sp|A1S2P5|HSLV_SHEAM RecName: Full=ATP-dependent protease subunit HslV
gi|119766081|gb|ABL98651.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella amazonensis SB2B]
Length = 174
Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats.
Identities = 102/172 (59%), Positives = 133/172 (77%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHGKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L+R++VELAKDWR D+ LR LEA++ +AD +L+ITG GDV++PEN ++
Sbjct: 62 EAKLEMHQGHLMRAAVELAKDWRTDRMLRKLEALLAVADAESSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A +AA AL+ +T A EIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNFAQAAATALLENTDLGALEIAEKSLTIAGDICVFTNQFKTIEELS 173
>gi|297180839|gb|ADI17044.1| ATP-dependent protease hslVU (clpYQ), peptidase subunit [uncultured
alpha proteobacterium HF0010_30A23]
Length = 334
Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats.
Identities = 118/189 (62%), Positives = 150/189 (79%), Gaps = 8/189 (4%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGF 61
+M D++ MH TTIL+VRK VV+AGDGQVSLG TVMK +A KVRRLGK ++I GF
Sbjct: 143 LMSDENV---MHGTTILSVRKGNEVVVAGDGQVSLGPTVMKGSAIKVRRLGKRNDVIGGF 199
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AG++ADAFTL ERLE KLE YP QL+R++VELAKDWR D+YLR LEAM+++ D +L++
Sbjct: 200 AGATADAFTLFERLEAKLETYPGQLVRAAVELAKDWRQDRYLRRLEAMLIVVDAEHSLIV 259
Query: 122 TGMGDVLEPE-NGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTN 177
TG GDV+E E +GV+AIGSGG+YALSAARAL+ +AE+IAR+AM +A DICVYTN
Sbjct: 260 TGTGDVVEAEADGVLAIGSGGNYALSAARALITVEDDSLTAEDIARRAMKVAGDICVYTN 319
Query: 178 HNIVLETLK 186
H++ LE L+
Sbjct: 320 HSVRLEKLE 328
>gi|319406536|emb|CBI80178.1| heat shock protein [Bartonella sp. 1-1C]
Length = 193
Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats.
Identities = 128/183 (69%), Positives = 150/183 (81%), Gaps = 1/183 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSS 65
+H M+ TTI+TVRK VV+AGDGQVSLGQT+MK+NARKVRRLGK G +IAGFAG++
Sbjct: 3 EHKPDIMYGTTIVTVRKGNKVVMAGDGQVSLGQTIMKSNARKVRRLGKSGAVIAGFAGAT 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+AD+ TL +TG+G
Sbjct: 63 ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADQKTTLALTGLG 122
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GVMAIGSGG++ALSAAR LM AE IA KAMSIAA ICVYTN N +E L
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARVLMDMDLDAETIASKAMSIAAKICVYTNDNFTIEAL 182
Query: 186 KVG 188
Sbjct: 183 DAE 185
>gi|113461677|ref|YP_719746.1| ATP-dependent protease peptidase subunit [Haemophilus somnus 129PT]
gi|170718715|ref|YP_001783905.1| ATP-dependent protease peptidase subunit [Haemophilus somnus 2336]
gi|122945435|sp|Q0I5E1|HSLV_HAES1 RecName: Full=ATP-dependent protease subunit HslV
gi|189028449|sp|B0US06|HSLV_HAES2 RecName: Full=ATP-dependent protease subunit HslV
gi|112823720|gb|ABI25809.1| heat shock protein [Haemophilus somnus 129PT]
gi|168826844|gb|ACA32215.1| 20S proteasome A and B subunits [Haemophilus somnus 2336]
Length = 175
Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats.
Identities = 105/173 (60%), Positives = 134/173 (77%), Gaps = 2/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NARKVRRL G ++ GFAG +ADAFTL E
Sbjct: 2 TTIVSVRRKGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLTGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-V 134
E+KLE + LL+S+VELAK+WR D+ LR LEAM+++ADKT +L+ITG GDV++PE +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKEWRTDRALRRLEAMLIVADKTESLIITGNGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+AIGSGG+YALSAARAL+ +T SA EI K++ IA DICV+TN +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTDLSAREIVEKSLKIAGDICVFTNLTHTIEELS 174
>gi|329891072|ref|ZP_08269415.1| ATP-dependent protease hslV [Brevundimonas diminuta ATCC 11568]
gi|328846373|gb|EGF95937.1| ATP-dependent protease hslV [Brevundimonas diminuta ATCC 11568]
Length = 183
Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats.
Identities = 119/184 (64%), Positives = 146/184 (79%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M ++ H TTIL VRK+G VIAGDGQVS+G T++K ARKVR L G ++AGFAG
Sbjct: 1 MSASNFP-DWHGTTILAVRKNGRTVIAGDGQVSMGPTIVKGAARKVRTLANGKVLAGFAG 59
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADA TL+ERLE KLEQYP+QL R+ VELAKDWR D+YLR LEAM+L+ADK L +TG
Sbjct: 60 ATADALTLIERLEAKLEQYPDQLARACVELAKDWRTDRYLRRLEAMLLVADKDTILTVTG 119
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIV 181
+GDVLEPE GV A+GSGG+YAL+AARAL+ T+ AE+IARKAM IAADICVYTN N+
Sbjct: 120 VGDVLEPEYGVAAVGSGGNYALAAARALIDEHTELDAEQIARKAMKIAADICVYTNGNLT 179
Query: 182 LETL 185
+E+L
Sbjct: 180 IESL 183
>gi|330858961|emb|CBX69323.1| ATP-dependent protease hslV [Yersinia enterocolitica W22703]
Length = 174
Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats.
Identities = 100/171 (58%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL IIAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNDKIIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAA AL+ +T+ A +I K++SIA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAAHALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEEL 172
>gi|296105370|ref|YP_003615516.1| ATP-dependent HslUV protease, peptidase subunit HslV [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295059829|gb|ADF64567.1| ATP-dependent HslUV protease, peptidase subunit HslV [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 176
Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats.
Identities = 102/171 (59%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T +A +IA KA+ IA DIC+YTNHN +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTDMNARDIAVKALDIAGDICIYTNHNHTIEEL 172
>gi|89067404|ref|ZP_01154917.1| ATP-dependent protease peptidase subunit [Oceanicola granulosus
HTCC2516]
gi|89046973|gb|EAR53027.1| ATP-dependent protease peptidase subunit [Oceanicola granulosus
HTCC2516]
Length = 186
Score = 290 bits (742), Expect = 9e-77, Method: Composition-based stats.
Identities = 124/184 (67%), Positives = 144/184 (78%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D + H TTI+ VRK G VVI+GDGQVSLG TV+K ARKVRRL G ++IAGF
Sbjct: 1 MADSQFP-GWHGTTIIGVRKGGEVVISGDGQVSLGDTVIKGTARKVRRLSPGGYDVIAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLEKKLE P QL R+SVELAKDWR DKYL+ LEAM++++D VI
Sbjct: 60 AGSTADAFTLLERLEKKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGKDMFVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG+YAL+A RALM T++ AEEIAR+AM IAADICVYTN N
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNYALAAGRALMDTEHDAEEIARRAMQIAADICVYTNGNTT 179
Query: 182 LETL 185
+E L
Sbjct: 180 VEKL 183
>gi|222147042|ref|YP_002547999.1| ATP-dependent protease peptidase subunit [Agrobacterium vitis S4]
gi|254802325|sp|B9JXW5|HSLV_AGRVS RecName: Full=ATP-dependent protease subunit HslV
gi|221734032|gb|ACM34995.1| heat shock protein hslV [Agrobacterium vitis S4]
Length = 186
Score = 290 bits (742), Expect = 9e-77, Method: Composition-based stats.
Identities = 138/186 (74%), Positives = 164/186 (88%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + + MH TTI+TVRK G+VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG
Sbjct: 1 MSEHNPYGTMHGTTIITVRKGGMVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTLLERLEKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADKT+TL ITG
Sbjct: 61 ATADAFTLLERLEKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKTVTLAITG 120
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE+G +AIGSGG+YAL+AA ALM T+ SAEE+ARKAM IAADICVYTN N+++E
Sbjct: 121 NGDVLEPEHGTIAIGSGGNYALAAALALMDTEKSAEEVARKAMKIAADICVYTNENVLVE 180
Query: 184 TLKVGD 189
TL+ +
Sbjct: 181 TLESAN 186
>gi|290477228|ref|YP_003470145.1| peptidase component of the HslUV protease [Xenorhabdus bovienii
SS-2004]
gi|289176578|emb|CBJ83387.1| peptidase component of the HslUV protease [Xenorhabdus bovienii
SS-2004]
Length = 176
Score = 290 bits (742), Expect = 9e-77, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATMGHTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGGSYA +AARA++ T+ SA EIA +A++IA DIC+YTNHN E L
Sbjct: 122 AIGSGGSYAQAAARAMLETTELSAREIAERALTIAGDICIYTNHNHNFEEL 172
>gi|51246548|ref|YP_066432.1| ATP-dependent protease peptidase subunit [Desulfotalea psychrophila
LSv54]
gi|50877585|emb|CAG37425.1| probable ATP-dependent protease HslV, protease subunit
[Desulfotalea psychrophila LSv54]
Length = 198
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 102/184 (55%), Positives = 139/184 (75%), Gaps = 1/184 (0%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ +K K+ +TTIL +R G VV+AGDGQVS+G TVMK NARKVRRL +I GFA
Sbjct: 15 TVKNKRDQEKIRSTTILAIRHKGEVVVAGDGQVSMGNTVMKHNARKVRRLYHDQVITGFA 74
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL ++LE+KLEQY L+R++VELAK+WR DK LR LEA+++ ADK +L+++
Sbjct: 75 GATADAFTLFDKLEEKLEQYNGNLMRAAVELAKEWRTDKMLRKLEALLIAADKDYSLLLS 134
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+E + GV++IGSGG YA +AA AL ++ A EIA+ +M IAADICV+TNH+
Sbjct: 135 GTGDVIESDTGVLSIGSGGHYAQAAALALVHNSDLDAYEIAKASMKIAADICVFTNHSTT 194
Query: 182 LETL 185
+E +
Sbjct: 195 IEKI 198
>gi|228879511|ref|YP_001572521.2| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|283787387|ref|YP_003367252.1| ATP-dependent protease (heat shock protein) [Citrobacter rodentium
ICC168]
gi|282950841|emb|CBG90518.1| ATP-dependent protease (heat shock protein) [Citrobacter rodentium
ICC168]
Length = 176
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 172
>gi|254418251|ref|ZP_05031975.1| peptidase, T1 family [Brevundimonas sp. BAL3]
gi|196184428|gb|EDX79404.1| peptidase, T1 family [Brevundimonas sp. BAL3]
Length = 184
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 118/184 (64%), Positives = 147/184 (79%), Gaps = 2/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M ++ H TTIL VRK+G VIAGDGQVS+G T++K ARKVR L G ++AGFAG
Sbjct: 1 MTQSNFP-DWHGTTILAVRKNGRTVIAGDGQVSMGPTIVKGAARKVRTLAGGKVLAGFAG 59
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTL+ERLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+ADK+ +TG
Sbjct: 60 ATADAFTLIERLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADKSSIFTVTG 119
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVL 182
+GDVLEPE+GV A+GSGG+YALSAARAL+ T AE +ARKAM IAA+ICVYTN N+ +
Sbjct: 120 VGDVLEPEHGVAAVGSGGNYALSAARALIEETDLDAEAVARKAMKIAAEICVYTNGNLTV 179
Query: 183 ETLK 186
ETL+
Sbjct: 180 ETLE 183
>gi|294675592|ref|YP_003576207.1| ATP-dependent protease HslV [Rhodobacter capsulatus SB 1003]
gi|294474412|gb|ADE83800.1| ATP-dependent protease HslV [Rhodobacter capsulatus SB 1003]
Length = 185
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 124/185 (67%), Positives = 145/185 (78%), Gaps = 3/185 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D+ + H TTI+ VRK G VV+AGDGQVSLGQTV+K ARKVRRL G ++AGF
Sbjct: 1 MTDEKFP-GWHGTTIIGVRKGGRVVVAGDGQVSLGQTVIKGTARKVRRLSPGGREVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLEKKLE P QL R+ VELAKDWR DKYLRNLEAM+++ D VI
Sbjct: 60 AGSTADAFTLLERLEKKLEAAPGQLARACVELAKDWRTDKYLRNLEAMLIVTDGADLYVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG+YAL+AARALM + AE IARKAM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNYALAAARALMDSDLDAEAIARKAMAIAADICVYTNGNLT 179
Query: 182 LETLK 186
+E++
Sbjct: 180 VESIS 184
>gi|121997993|ref|YP_001002780.1| ATP-dependent protease peptidase subunit [Halorhodospira halophila
SL1]
gi|189028450|sp|A1WWB6|HSLV_HALHL RecName: Full=ATP-dependent protease subunit HslV
gi|121589398|gb|ABM61978.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Halorhodospira halophila SL1]
Length = 184
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 100/179 (55%), Positives = 136/179 (75%), Gaps = 1/179 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TTIL VR++G V + GDGQV+LG TV+K NARKVRRL G ++AGFAG++ADAFTL
Sbjct: 4 LHGTTILAVRREGQVALGGDGQVTLGHTVLKGNARKVRRLYHGRVLAGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E +LE++ QL RS+VELAK+WR D+ LR LEA++++A+ L ++G GDV+EPE+
Sbjct: 64 ERFEAQLEKHHGQLARSAVELAKEWRSDRVLRRLEALLVVANTESLLTLSGTGDVIEPEH 123
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
+MA+GSGG YA +A RAL+ T A++I ++A+ IA DICVYTN +I +ETL E
Sbjct: 124 DLMAVGSGGPYAQAAGRALLESTDLPADQITQRALEIAGDICVYTNRHITVETLPETRE 182
>gi|329298185|ref|ZP_08255521.1| ATP-dependent protease subunit HslV [Plautia stali symbiont]
Length = 176
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 100/171 (58%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAGS+ADAFTL E
Sbjct: 2 TTIVSVRRNGRVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGSTADAFTLYELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+I+G GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENSSLIISGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A +I KA++IA DIC+YTNHNI E L
Sbjct: 122 AIGSGGPYAQAAARALLENTEMGAHDIVAKALNIAGDICIYTNHNINYEEL 172
>gi|326796961|ref|YP_004314781.1| ATP-dependent protease hslV [Marinomonas mediterranea MMB-1]
gi|326547725|gb|ADZ92945.1| ATP-dependent protease hslV [Marinomonas mediterranea MMB-1]
Length = 183
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 110/174 (63%), Positives = 144/174 (82%), Gaps = 1/174 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTILTVRK+ VV+ GDGQVSLG TVMK NARKVRRL KG +IAGFAG +ADAFTL ER
Sbjct: 2 TTILTVRKENEVVVGGDGQVSLGNTVMKGNARKVRRLYKGEVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++V+LAKDWR DK LR LEAM+++A+K TL+ITG GDV+EP++G +
Sbjct: 62 EGQLEKHQGHLVRAAVDLAKDWRSDKALRKLEAMLVVANKENTLIITGTGDVVEPQHGAL 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG+YA +AARAL+ +T SA++I K+++IAADICV+TNHN+ +ET+ +
Sbjct: 122 AIGSGGNYAEAAARALIDNTDLSAKDIVEKSLNIAADICVFTNHNLTIETIAID 175
>gi|114798299|ref|YP_760731.1| ATP-dependent protease peptidase subunit [Hyphomonas neptunium ATCC
15444]
gi|123128718|sp|Q0C0L2|HSLV_HYPNA RecName: Full=ATP-dependent protease subunit HslV
gi|114738473|gb|ABI76598.1| ATP-dependent protease HslVU [Hyphomonas neptunium ATCC 15444]
Length = 185
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 114/185 (61%), Positives = 147/185 (79%), Gaps = 1/185 (0%)
Query: 4 MGDKHYAVK-MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
M + + H TT+L VRK+G +V+ DGQVS+GQT+MK NARKVRR+ G I+AGFA
Sbjct: 1 MTNPQDSKAIWHGTTVLAVRKNGKLVMLSDGQVSMGQTIMKGNARKVRRIAGGQILAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL ERLE KLE++P+QL R++VELAKDWR +KYL+ LEA++++ADK TLVIT
Sbjct: 61 GATADAFTLFERLEAKLERFPDQLQRAAVELAKDWRTEKYLQKLEALLIVADKHSTLVIT 120
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
G GDVLEPE+ V++IGSGG+YAL+AAR L + AE I RKAM IAADICVYTN + +
Sbjct: 121 GAGDVLEPEHHVVSIGSGGNYALAAARGLYDYEEDAETIGRKAMQIAADICVYTNGHFSV 180
Query: 183 ETLKV 187
ETL++
Sbjct: 181 ETLEI 185
>gi|192288741|ref|YP_001989346.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
palustris TIE-1]
gi|192282490|gb|ACE98870.1| 20S proteasome A and B subunits [Rhodopseudomonas palustris TIE-1]
Length = 189
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 126/181 (69%), Positives = 148/181 (81%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
H TTILTVRK G VVI GDGQVS+GQTV+KANA+KVR+LGKG++I GFAG+
Sbjct: 7 SADAGPPVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGA 66
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
+ADAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG
Sbjct: 67 TADAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGT 126
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
GDVLEPE GVMAIGSGG+YAL+AARAL T AE I RKA+ IAA+ICVYTN N+ LET
Sbjct: 127 GDVLEPEAGVMAIGSGGNYALAAARALADTDQDAETIVRKALGIAAEICVYTNGNLTLET 186
Query: 185 L 185
L
Sbjct: 187 L 187
>gi|114571526|ref|YP_758206.1| ATP-dependent protease peptidase subunit [Maricaulis maris MCS10]
gi|114341988|gb|ABI67268.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Maricaulis maris MCS10]
Length = 189
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 117/181 (64%), Positives = 141/181 (77%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D A TTI+ VRK G +V+AGDGQVS+G TVMK NARKVRRL G++IAGFAG++
Sbjct: 8 DYADASLWRGTTIIAVRKGGRLVVAGDGQVSIGPTVMKGNARKVRRLAGGDVIAGFAGAT 67
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAF L ERLE KLEQYP QL R+ VELAKDWR D+YLR LEAM+++ D T ++TG G
Sbjct: 68 ADAFALFERLEAKLEQYPKQLARACVELAKDWRTDRYLRRLEAMLIVGDSNETFLLTGAG 127
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GV+A+GSGG+YALSAARA+ + E IARKAM IAA ICVYTN N+ +ETL
Sbjct: 128 DVLEPEDGVVAVGSGGNYALSAARAIFDYEADPEVIARKAMEIAARICVYTNENLTVETL 187
Query: 186 K 186
+
Sbjct: 188 E 188
>gi|300714744|ref|YP_003739547.1| ATP-dependent protease HslV [Erwinia billingiae Eb661]
gi|299060580|emb|CAX57687.1| ATP-dependent protease HslV [Erwinia billingiae Eb661]
Length = 176
Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats.
Identities = 99/171 (57%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A +I KA+ IA DIC+YTNHN+ +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTEIGARDIVEKALGIAGDICIYTNHNLTIEAL 172
>gi|220931600|ref|YP_002508508.1| heat shock protein HslVU, ATP dependent protease HslV
[Halothermothrix orenii H 168]
gi|219992910|gb|ACL69513.1| heat shock protein HslVU, ATP dependent protease HslV
[Halothermothrix orenii H 168]
Length = 181
Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats.
Identities = 103/175 (58%), Positives = 139/175 (79%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+HATT++ V+ G +AGDGQV++G T+MK ARKVRRL KGNI+AGFAG+SADAFTL
Sbjct: 7 IHATTVVAVKYKGKTAMAGDGQVTMGNTIMKGGARKVRRLYKGNILAGFAGTSADAFTLF 66
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E KLE+Y L R++VELAK+WR DK LR LEA++L+A++ L+I+G GDV+EP++
Sbjct: 67 EKFEVKLEEYHGNLERAAVELAKEWRTDKVLRKLEALLLVANEEKILLISGNGDVIEPDD 126
Query: 133 GVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG YAL+AARAL ++ A++IAR+A+ IA++IC+YTN NIV+E L
Sbjct: 127 DVTAIGSGGPYALAAARALVKHNSGLEAQDIAREALKIASEICIYTNGNIVVEEL 181
>gi|190571156|ref|YP_001975514.1| heat shock protein HslV [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|226704549|sp|B3CLU4|HSLV_WOLPP RecName: Full=ATP-dependent protease subunit HslV
gi|190357428|emb|CAQ54862.1| heat shock protein HslV [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 184
Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats.
Identities = 120/180 (66%), Positives = 155/180 (86%), Gaps = 1/180 (0%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H + KM+ TTIL++R+D VV+ GDGQVSLG TV+K+ ARKVRRL ++IAGFAG++AD
Sbjct: 4 HDSSKMYGTTILSIRRDKNVVVIGDGQVSLGHTVIKSGARKVRRLSGDSVIAGFAGATAD 63
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ERLE KL+++P QL+R+ VELAKDWRMDKYLR LEAM+++ADK+I+LVITG GDV
Sbjct: 64 AFTLFERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGDV 123
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
LEPE+G+ AIGSGG++ALSAA+AL+ + S EEIA+KAM IAADICVYTNHN+++E ++
Sbjct: 124 LEPEDGIAAIGSGGNFALSAAKALIDVEGISIEEIAKKAMKIAADICVYTNHNLIIEKIE 183
>gi|119470417|ref|ZP_01613145.1| ATP-dependent protease peptidase subunit [Alteromonadales bacterium
TW-7]
gi|119446342|gb|EAW27618.1| ATP-dependent protease peptidase subunit [Alteromonadales bacterium
TW-7]
Length = 172
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 103/171 (60%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+D VVI GDGQVSLG TVMK NARKVRRL G +IAGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRDNKVVIGGDGQVSLGNTVMKGNARKVRRLYNGKVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L +++VE+AKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLEMHQGNLTKAAVEMAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T SA EI K+++IA DICV+TN+ +E L
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAREIVEKSLTIAGDICVFTNNFQTIEEL 172
>gi|237747302|ref|ZP_04577782.1| ATP-dependent protease peptidase subunit [Oxalobacter formigenes
HOxBLS]
gi|229378653|gb|EEO28744.1| ATP-dependent protease peptidase subunit [Oxalobacter formigenes
HOxBLS]
Length = 178
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 105/176 (59%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG V+K ARKVR+L G ++AGFAG +ADAFTL
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVIKGTARKVRKLYNGRVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ER E KLE++ LLRSSVELAKDWR D+ LR LEAM+L+AD+ TLVITG GDVLEPE
Sbjct: 63 IERFEAKLEKHQGNLLRSSVELAKDWRTDRILRRLEAMLLVADRESTLVITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
GV AIGSGG+YA SAA AL +T+ EI K+++IA D+C+YTN ++ETL
Sbjct: 123 EGVGAIGSGGAYAQSAALALQRNTELPPAEIVSKSLAIAGDLCIYTNQAHIIETLD 178
>gi|330800877|ref|XP_003288459.1| hypothetical protein DICPUDRAFT_34073 [Dictyostelium purpureum]
gi|325081518|gb|EGC35031.1| hypothetical protein DICPUDRAFT_34073 [Dictyostelium purpureum]
Length = 330
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 107/178 (60%), Positives = 137/178 (76%), Gaps = 1/178 (0%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+M +TTIL+VR++G VVI GDGQ +LG +++K NA+K+R+L G IIAGFAGS DA
Sbjct: 61 DPYRMKSTTILSVRRNGKVVIIGDGQCTLGHSIVKPNAKKIRKLADGKIIAGFAGSVGDA 120
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL E LEKKL ++ LL+S VELA+ WR DKY R LEA I++ADK ITL + G GDVL
Sbjct: 121 FTLFELLEKKLAEHRGLLLKSCVELAQQWRTDKYYRRLEASIIVADKDITLTLDGNGDVL 180
Query: 129 EPENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EP +G++AIGSGG +ALSAARAL++ EEIA+++M IAADIC+YTNHN V+E L
Sbjct: 181 EPNDGILAIGSGGDFALSAARALLTVPDIDPEEIAKRSMKIAADICIYTNHNFVMEVL 238
>gi|85060146|ref|YP_455848.1| ATP-dependent protease peptidase subunit [Sodalis glossinidius str.
'morsitans']
gi|123518774|sp|Q2NQY2|HSLV_SODGM RecName: Full=ATP-dependent protease subunit HslV
gi|84780666|dbj|BAE75443.1| heat shock protein [Sodalis glossinidius str. 'morsitans']
Length = 182
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 99/171 (57%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VVI GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRKGHVVIGGDGQATLGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +A+++ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEVHQGHLVKAAVELAKDWRTDRMLRRLEALLAVANESDSLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T+ A EI KA+ IA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQSAARALLENTELGAREIVEKALGIAGDICIYTNQFHTIEEL 172
>gi|212633357|ref|YP_002309882.1| ATP-dependent protease peptidase subunit [Shewanella piezotolerans
WP3]
gi|226704547|sp|B8CI19|HSLV_SHEPW RecName: Full=ATP-dependent protease subunit HslV
gi|212554841|gb|ACJ27295.1| 20S proteasome, A and B subunits [Shewanella piezotolerans WP3]
Length = 174
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 104/172 (60%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L+R++VE+AKDWR DK LR LEA++ +AD +L+ITG GDV++PEN ++
Sbjct: 62 EAKLEMHQGHLMRAAVEMAKDWRSDKVLRKLEALLAVADGEASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A SAA AL+ +T+ SA EIA K+++IA DICV+TN +E LK
Sbjct: 122 AIGSGGNFAQSAATALLENTELSALEIAEKSLTIAGDICVFTNQFKTIEELK 173
>gi|311281624|ref|YP_003943855.1| 20S proteasome A and B subunits [Enterobacter cloacae SCF1]
gi|308750819|gb|ADO50571.1| 20S proteasome A and B subunits [Enterobacter cloacae SCF1]
Length = 176
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ SA +IA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTEMSARDIAVKALDIAGDICIYTNHFHTIEEL 172
>gi|222084249|ref|YP_002542775.1| heat shock protease HslVU [Agrobacterium radiobacter K84]
gi|254802324|sp|B9JG70|HSLV_AGRRK RecName: Full=ATP-dependent protease subunit HslV
gi|221721697|gb|ACM24853.1| heat shock protease HslVU [Agrobacterium radiobacter K84]
Length = 175
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 133/173 (76%), Positives = 158/173 (91%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+T+RK G VV+AGDGQVSLGQTVMK NARKVRR+GKG++IAGFAG++ADAFTLLERL
Sbjct: 2 TTIVTIRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGDVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK++TL ITG GDVLEPE+G +
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSVTLAITGNGDVLEPEHGAL 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG+YAL+AARALM T SAE++AR+A+ IAADICVYTNHN+V+ETL
Sbjct: 122 AIGSGGNYALAAARALMDTDKSAEDVARRALDIAADICVYTNHNVVIETLDAE 174
>gi|119896714|ref|YP_931927.1| ATP-dependent protease peptidase subunit [Azoarcus sp. BH72]
gi|166221622|sp|A1K2I5|HSLV_AZOSB RecName: Full=ATP-dependent protease subunit HslV
gi|119669127|emb|CAL93040.1| ATP-dependent protease HslV [Azoarcus sp. BH72]
Length = 178
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 101/176 (57%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG V+KA+ARKVR L +G I+AGFAG +ADAFTL
Sbjct: 3 QYHGTTILSVRRGNSVALGGDGQVTLGNIVVKASARKVRTLYQGQILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+++ LLRS+VELAKDWR D+ LR LEAM+ +AD+ +L+ITG GDVLEPE
Sbjct: 63 FERFEAKLDKHQGNLLRSAVELAKDWRTDRMLRRLEAMLAVADREHSLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G++AIGSGG+YA SAARAL+ +T+ S ++ K+++IA D+C+YTN +E L
Sbjct: 123 QGIVAIGSGGAYAQSAARALIENTELSPRDVIAKSLAIAGDLCIYTNQCHTIEVLD 178
>gi|16762343|ref|NP_457960.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|16767358|ref|NP_462973.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|29143831|ref|NP_807173.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|56415936|ref|YP_153011.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|62182551|ref|YP_218968.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161617228|ref|YP_001591193.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Paratyphi B str. SPB7]
gi|167551411|ref|ZP_02345166.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167991668|ref|ZP_02572767.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168233037|ref|ZP_02658095.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168237719|ref|ZP_02662777.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168244149|ref|ZP_02669081.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168263002|ref|ZP_02684975.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168467438|ref|ZP_02701275.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168821554|ref|ZP_02833554.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194446683|ref|YP_002043355.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194448660|ref|YP_002048095.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194468779|ref|ZP_03074763.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194737361|ref|YP_002117013.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197248081|ref|YP_002149020.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|197264283|ref|ZP_03164357.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197364863|ref|YP_002144500.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|198242693|ref|YP_002218018.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|200387634|ref|ZP_03214246.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204930332|ref|ZP_03221309.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|207859279|ref|YP_002245930.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|213022301|ref|ZP_03336748.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. 404ty]
gi|213161767|ref|ZP_03347477.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
gi|213416545|ref|ZP_03349689.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E01-6750]
gi|213426206|ref|ZP_03358956.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213615558|ref|ZP_03371384.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E98-2068]
gi|213648008|ref|ZP_03378061.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. J185]
gi|224585903|ref|YP_002639702.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|238912238|ref|ZP_04656075.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|289828421|ref|ZP_06546303.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E98-3139]
gi|291084784|ref|ZP_06542259.2| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. AG3]
gi|61226073|sp|P0A271|HSLV_SALTY RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|61226074|sp|P0A272|HSLV_SALTI RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|75479325|sp|Q57HC5|HSLV_SALCH RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|81599678|sp|Q5PK45|HSLV_SALPA RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|189036236|sp|A9MZI2|HSLV_SALPB RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065934|sp|B5F0S3|HSLV_SALA4 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065935|sp|B5FPU1|HSLV_SALDC RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065936|sp|B5QXM1|HSLV_SALEP RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065938|sp|B4TCM9|HSLV_SALHS RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065939|sp|B4T0T9|HSLV_SALNS RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238065940|sp|B4TPV3|HSLV_SALSV RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|238690773|sp|B5BJK9|HSLV_SALPK RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|254802422|sp|C0Q442|HSLV_SALPC RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|25513410|pir||AI0938 heat shock protein [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|9650895|emb|CAC00719.1| heat shock protein [Salmonella typhimurium]
gi|16422659|gb|AAL22932.1| peptidase component of the HslUV protease [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16504647|emb|CAD09531.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29139467|gb|AAO71033.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|56130193|gb|AAV79699.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62130184|gb|AAX67887.1| peptidase component of the HslUV protease [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161366592|gb|ABX70360.1| hypothetical protein SPAB_05069 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194405346|gb|ACF65568.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194406964|gb|ACF67183.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194455143|gb|EDX43982.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194712863|gb|ACF92084.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195630183|gb|EDX48823.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197096340|emb|CAR61944.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197211784|gb|ACH49181.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197242538|gb|EDY25158.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197289401|gb|EDY28766.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197937209|gb|ACH74542.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199604732|gb|EDZ03277.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204320736|gb|EDZ05938.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205323731|gb|EDZ11570.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205329973|gb|EDZ16737.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205332762|gb|EDZ19526.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205336922|gb|EDZ23686.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205341786|gb|EDZ28550.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205348259|gb|EDZ34890.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206711082|emb|CAR35456.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224470431|gb|ACN48261.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|261249208|emb|CBG27070.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267996392|gb|ACY91277.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301160599|emb|CBW20130.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312915208|dbj|BAJ39182.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|320088503|emb|CBY98262.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321225384|gb|EFX50442.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322613145|gb|EFY10089.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|322619227|gb|EFY16110.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|322626094|gb|EFY22906.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|322626446|gb|EFY23252.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|322632440|gb|EFY29188.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|322635078|gb|EFY31799.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|322642720|gb|EFY39310.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|322646454|gb|EFY42965.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322650758|gb|EFY47159.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|322652942|gb|EFY49279.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322657256|gb|EFY53536.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322662256|gb|EFY58471.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|322666789|gb|EFY62965.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|322672061|gb|EFY68176.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|322675782|gb|EFY71854.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|322681801|gb|EFY77827.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|322684003|gb|EFY80012.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|322717049|gb|EFZ08620.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. A50]
gi|323132438|gb|ADX19868.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 4/74]
gi|323193275|gb|EFZ78490.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|323197632|gb|EFZ82765.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|323200793|gb|EFZ85864.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|323207201|gb|EFZ92153.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|323211404|gb|EFZ96245.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|323218551|gb|EGA03259.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|323220967|gb|EGA05399.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|323225944|gb|EGA10163.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|323231623|gb|EGA15735.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|323236129|gb|EGA20207.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|323239450|gb|EGA23499.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|323243957|gb|EGA27968.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|323249319|gb|EGA33236.1| ATP-dependent protease subunit HslV [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250438|gb|EGA34321.1| ATP-dependent protease subunit HslV [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258892|gb|EGA42544.1| ATP-dependent protease subunit HslV [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260136|gb|EGA43759.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|323265255|gb|EGA48752.1| ATP-dependent protease subunit HslV [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323270477|gb|EGA53923.1| ATP-dependent protease subunit HslV [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326625810|gb|EGE32155.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Dublin str. 3246]
gi|332990921|gb|AEF09904.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
Length = 176
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 172
>gi|77462069|ref|YP_351573.1| ATP-dependent protease peptidase subunit [Rhodobacter sphaeroides
2.4.1]
gi|332559996|ref|ZP_08414318.1| ATP-dependent protease subunit HslV [Rhodobacter sphaeroides WS8N]
gi|123593093|sp|Q3J6B2|HSLV_RHOS4 RecName: Full=ATP-dependent protease subunit HslV
gi|77386487|gb|ABA77672.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodobacter sphaeroides 2.4.1]
gi|332277708|gb|EGJ23023.1| ATP-dependent protease subunit HslV [Rhodobacter sphaeroides WS8N]
Length = 185
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 124/185 (67%), Positives = 146/185 (78%), Gaps = 3/185 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M + + H TTIL VR+ G VV+AGDGQVSLGQTV+K ARKVRRL G ++AGF
Sbjct: 1 MAEDRFP-GWHGTTILAVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHEVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLEKKLE P QL R+ VELAKDWRMDKYLRNLEAM+++ D LV+
Sbjct: 60 AGSTADAFTLLERLEKKLEAAPGQLARACVELAKDWRMDKYLRNLEAMLIVTDGETLLVL 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR LM+T AEEIARKAM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNFALAAARGLMATDLPAEEIARKAMAIAADICVYTNGNLT 179
Query: 182 LETLK 186
+E +
Sbjct: 180 VERIS 184
>gi|21328718|gb|AAM48724.1| heat shock protein HslV [uncultured marine proteobacterium]
Length = 185
Score = 288 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 116/185 (62%), Positives = 143/185 (77%), Gaps = 3/185 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D ++ H TTI+ VRK VV+AGDGQVSLG TV+K +ARKVRRL G +++ GF
Sbjct: 1 MRDTNFP-GWHGTTIIGVRKGTQVVVAGDGQVSLGPTVIKGSARKVRRLSPGGNDVVVGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+ VELAKDWR DKYL+ LEAM+++ D L+I
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGAELLII 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+G+ AIGSGG++AL+AAR L T +AEEIARKAM+IA+DICVYTN N+
Sbjct: 120 TGAGDVLEPEHGIAAIGSGGNFALAAARGLQETDLNAEEIARKAMAIASDICVYTNGNLT 179
Query: 182 LETLK 186
+E +
Sbjct: 180 VEVIS 184
>gi|221641022|ref|YP_002527284.1| ATP-dependent protease peptidase subunit [Rhodobacter sphaeroides
KD131]
gi|254802421|sp|B9KRG9|HSLV_RHOSK RecName: Full=ATP-dependent protease subunit HslV
gi|221161803|gb|ACM02783.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodobacter sphaeroides KD131]
Length = 185
Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats.
Identities = 124/185 (67%), Positives = 148/185 (80%), Gaps = 3/185 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M ++ + H TTIL VR+ G VV+AGDGQVSLGQTV+K ARKVRRL G ++AGF
Sbjct: 1 MAEERFP-GWHGTTILAVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHEVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLEKKLE P QL R+ VELAKDWRMDKYLRNLEAM+++ D LV+
Sbjct: 60 AGSTADAFTLLERLEKKLEAAPGQLARACVELAKDWRMDKYLRNLEAMLIVTDGETLLVL 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR LM+T+ AEEIARKAM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNFALAAARGLMATELPAEEIARKAMAIAADICVYTNGNLT 179
Query: 182 LETLK 186
+E +
Sbjct: 180 VERIS 184
>gi|126666727|ref|ZP_01737704.1| ATP-dependent protease peptidase subunit [Marinobacter sp. ELB17]
gi|126628772|gb|EAZ99392.1| ATP-dependent protease peptidase subunit [Marinobacter sp. ELB17]
Length = 176
Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats.
Identities = 105/175 (60%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR+D V + GDGQVS G TVMK NARKVRRL G ++AGFAG +ADAFTL ER
Sbjct: 2 TTILSVRRDDEVTMGGDGQVSFGNTVMKGNARKVRRLYNGQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L R++VELAKDWR D+ LR LEA++ +ADKT +L+ITG GDV+EPE G++
Sbjct: 62 EAQLEKHQGNLTRAAVELAKDWRSDRALRKLEALLAVADKTASLIITGNGDVIEPEMGLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
AIGSGG +A ++ARAL+ +T SA EI K + IAADIC+YTN N +E L D
Sbjct: 122 AIGSGGPFAQASARALLENTNMSAREITEKGLIIAADICIYTNQNRTIEVLSAND 176
>gi|83944943|ref|ZP_00957309.1| ATP-dependent protease peptidase subunit [Oceanicaulis alexandrii
HTCC2633]
gi|83851725|gb|EAP89580.1| ATP-dependent protease peptidase subunit [Oceanicaulis alexandrii
HTCC2633]
Length = 184
Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats.
Identities = 117/183 (63%), Positives = 145/183 (79%), Gaps = 1/183 (0%)
Query: 4 MGD-KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
M D + TTIL+VRK+G VV+AGDGQVS+G TV+KA ARKVR + G +I GFA
Sbjct: 1 MADTERKFPGWRGTTILSVRKNGKVVLAGDGQVSIGDTVVKATARKVRPIASGKVITGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAF L ERLE KLEQYP+QL R+ VELAKDWR D+Y+R LEAM+++ADK+ T +T
Sbjct: 61 GATADAFALFERLEGKLEQYPDQLARACVELAKDWRTDRYMRRLEAMLIVADKSETFTLT 120
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
G GDVLEPE+GV AIGSGG+YALSAARAL+ + AE IARKAM IA++ICVY+N N+ +
Sbjct: 121 GAGDVLEPEDGVAAIGSGGNYALSAARALLDYEEDAEVIARKAMKIASEICVYSNGNLTV 180
Query: 183 ETL 185
ETL
Sbjct: 181 ETL 183
>gi|88705212|ref|ZP_01102923.1| ATP-dependent protease HslV [Congregibacter litoralis KT71]
gi|88700302|gb|EAQ97410.1| ATP-dependent protease HslV [Congregibacter litoralis KT71]
Length = 179
Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats.
Identities = 99/176 (56%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL VR+ VV+ GDGQVS+G T+MK NARKVRRL K ++AGFAG +ADAFTL
Sbjct: 3 QFRGTTILCVRRGNSVVVGGDGQVSMGNTIMKGNARKVRRLYKDQVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E +LE++ QL+R++VELAK WR ++ LR LEA++ +ADK +LVI+G GDV+EPE
Sbjct: 63 FELFEAQLEKHSGQLVRAAVELAKAWRTERSLRQLEALLAVADKETSLVISGNGDVIEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N ++AIGSGGS+A +AA AL+ +T+ SA E+ K + IAADIC+YTN +E L
Sbjct: 123 NNLIAIGSGGSFAQAAAMALLDNTELSAREVVEKGLGIAADICIYTNQQRTIEQLD 178
>gi|84501209|ref|ZP_00999414.1| ATP-dependent protease peptidase subunit [Oceanicola batsensis
HTCC2597]
gi|84390500|gb|EAQ02988.1| ATP-dependent protease peptidase subunit [Oceanicola batsensis
HTCC2597]
Length = 185
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 117/184 (63%), Positives = 142/184 (77%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M DK + H TTI+ VRK VV+AGDGQVS+GQTVMK ARKVRRL G +++ GF
Sbjct: 1 MADKDFP-GWHGTTIIGVRKGDEVVVAGDGQVSMGQTVMKGTARKVRRLSPGGYDVVCGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAF LLERLE KLE P QL R+ VELAKDWR DKYL+ LEAM+++ D L++
Sbjct: 60 AGSTADAFALLERLESKLEATPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGKELLIV 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE GV AIGSGG+YAL+AARAL+ T +AEEIARK++ IAA+ICVYTN N+
Sbjct: 120 TGAGDVLEPEYGVAAIGSGGNYALAAARALIDTDAAAEEIARKSLGIAAEICVYTNGNLT 179
Query: 182 LETL 185
+E +
Sbjct: 180 VERI 183
>gi|163750992|ref|ZP_02158224.1| ATP-dependent protease peptidase subunit [Shewanella benthica KT99]
gi|161329282|gb|EDQ00280.1| ATP-dependent protease peptidase subunit [Shewanella benthica KT99]
Length = 174
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L++++VE+AKDWR DK LR LEA++ +AD +L+ITG GDV++PEN ++
Sbjct: 62 EAKLEMHQGHLMKAAVEMAKDWRSDKMLRKLEALLAVADSECSLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG +A SAA AL+ +T+ +A EIA+K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGPFAQSAATALLENTELTATEIAQKSLTIAGDICVFTNQFKTIEEL 172
>gi|307546358|ref|YP_003898837.1| ATP-dependent protease peptidase subunit [Halomonas elongata DSM
2581]
gi|307218382|emb|CBV43652.1| ATP-dependent protease peptidase subunit [Halomonas elongata DSM
2581]
Length = 172
Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats.
Identities = 105/171 (61%), Positives = 138/171 (80%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ V +AGDGQVSLG TVMK NA KVRRL +G ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGDQVALAGDGQVSLGNTVMKGNASKVRRLYRGQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE+Y L++S+VELAKDWR D+ LR LEA++ +ADK +L+ITG GDV+EPE G++
Sbjct: 62 EAQLEKYQGNLVKSAVELAKDWRTDRALRRLEALLAVADKHASLIITGNGDVVEPERGII 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YAL++ARAL+ +T+ SA EI K++ IA DICV+TNH++ LE L
Sbjct: 122 AIGSGGNYALASARALLENTELSAREITEKSLEIAGDICVFTNHHVTLEEL 172
>gi|50123181|ref|YP_052348.1| ATP-dependent protease peptidase subunit [Pectobacterium
atrosepticum SCRI1043]
gi|85542202|sp|Q6CZ92|HSLV_ERWCT RecName: Full=ATP-dependent protease subunit HslV
gi|49613707|emb|CAG77158.1| ATP-dependent protease (heat shock protein) [Pectobacterium
atrosepticum SCRI1043]
Length = 176
Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats.
Identities = 97/171 (56%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYHDRVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A +I K++ IA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGARDIVEKSLGIAGDICIYTNQFHTIEEL 172
>gi|34495856|ref|NP_900071.1| ATP-dependent protease peptidase subunit [Chromobacterium violaceum
ATCC 12472]
gi|47605642|sp|Q7P113|HSLV_CHRVO RecName: Full=ATP-dependent protease subunit HslV
gi|34101711|gb|AAQ58079.1| heat shock protein [Chromobacterium violaceum ATCC 12472]
Length = 183
Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats.
Identities = 103/180 (57%), Positives = 137/180 (76%), Gaps = 1/180 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI++VR+ V + GDGQV+LG V+KA ARK+R+L G ++AGFAG +ADAFTL
Sbjct: 3 QFDGTTIVSVRRGERVALGGDGQVTLGNIVIKATARKIRKLHGGKVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ER E KL+++ LL S+VELAKDWR D+ LR LEAM+++ADK TL+ITG GDVLEPE
Sbjct: 63 IERFEAKLQKHQGNLLVSAVELAKDWRTDRMLRRLEAMLIVADKDHTLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
G+ AIGSGG++A SAARAL +T + E + +K++ IA DIC+YTNHN ++ETL DE
Sbjct: 123 QGIAAIGSGGAFAQSAARALFENTDLAPEVVVKKSLEIAGDICIYTNHNHLIETLGPDDE 182
>gi|134299828|ref|YP_001113324.1| ATP-dependent protease peptidase subunit [Desulfotomaculum reducens
MI-1]
gi|189028445|sp|A4J5Z6|HSLV_DESRM RecName: Full=ATP-dependent protease subunit HslV
gi|134052528|gb|ABO50499.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Desulfotomaculum reducens MI-1]
Length = 176
Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats.
Identities = 102/175 (58%), Positives = 134/175 (76%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V++ V +AGDGQV+ G T+MK ARKVRRL G ++AGFAGS ADAFTL
Sbjct: 2 FHATTIVAVKRGTKVAVAGDGQVTFGQNTIMKHTARKVRRLHNGQVLAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L+R++VELAK WR DKYLR LEAM+++A++ LV++G G+V+EP+
Sbjct: 62 FEKFEGKLEEYHGNLMRAAVELAKAWRTDKYLRTLEAMLIVANQEHLLVLSGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV AIGSGG YAL+AARAL T S ++I +A+++AADICVYTN NIV+E +
Sbjct: 122 EGVTAIGSGGPYALAAARALTKHTNLSPKDITYEALNLAADICVYTNKNIVVEEI 176
>gi|42520986|ref|NP_966901.1| ATP-dependent protease peptidase subunit [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|58696798|ref|ZP_00372329.1| heat shock protein HslV [Wolbachia endosymbiont of Drosophila
simulans]
gi|58698622|ref|ZP_00373518.1| protease HslVU, subunit HslV [Wolbachia endosymbiont of Drosophila
ananassae]
gi|99036089|ref|ZP_01315123.1| hypothetical protein Wendoof_01000042 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|225630855|ref|YP_002727646.1| ATP-dependent protease, peptidase subunit [Wolbachia sp. wRi]
gi|47605598|sp|P61479|HSLV_WOLPM RecName: Full=ATP-dependent protease subunit HslV
gi|254765623|sp|C0R4L3|HSLV_WOLWR RecName: Full=ATP-dependent protease subunit HslV
gi|42410727|gb|AAS14835.1| heat shock protein HslV [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|58534867|gb|EAL58970.1| protease HslVU, subunit HslV [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58537007|gb|EAL60155.1| heat shock protein HslV [Wolbachia endosymbiont of Drosophila
simulans]
gi|225592836|gb|ACN95855.1| ATP-dependent protease, peptidase subunit [Wolbachia sp. wRi]
Length = 184
Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats.
Identities = 122/181 (67%), Positives = 154/181 (85%), Gaps = 1/181 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H KM+ TTIL++RKD VV+ GDGQVSLG TV+K+ A+KVRRL ++IAGFAG++A
Sbjct: 3 QHDNNKMYGTTILSIRKDKSVVVIGDGQVSLGHTVIKSGAKKVRRLSGDSVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ERLE KL+++P QL+R+ VELAKDWRMDKYLR LEAM+++ADK+I+LVITG GD
Sbjct: 63 DAFTLFERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE+GV AIGSGG++ALSAARAL+ + S EEIA+KAM IA DICVYTNHN+V+E +
Sbjct: 123 VLEPEDGVAAIGSGGNFALSAARALIDIKGISIEEIAKKAMKIAGDICVYTNHNVVIEKI 182
Query: 186 K 186
+
Sbjct: 183 E 183
>gi|209966552|ref|YP_002299467.1| ATP-dependent protease peptidase subunit [Rhodospirillum centenum
SW]
gi|209960018|gb|ACJ00655.1| ATP-dependent protease HslV, putative [Rhodospirillum centenum SW]
Length = 187
Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats.
Identities = 117/182 (64%), Positives = 145/182 (79%), Gaps = 1/182 (0%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
V+ H TTIL+VRKDG VVIAGDGQVS+GQT++K+NARKVRRL G ++AGFAG+
Sbjct: 6 ASSPEPVQWHGTTILSVRKDGQVVIAGDGQVSMGQTIIKSNARKVRRLAGGGVMAGFAGA 65
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
+ADA L ERLE KLEQ+P QL R+ VE+AKDWR D+YLR LEAM+ +AD+ ++LVITG
Sbjct: 66 TADAMALFERLEAKLEQHPGQLARACVEMAKDWRTDRYLRRLEAMMAVADRDVSLVITGT 125
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE+G++ IGSGG++ALSAARAL+ AE IARKAM IA +ICVYTN +I LE
Sbjct: 126 GDVLEPEDGLIGIGSGGAFALSAARALVDIPGMDAEAIARKAMRIAGEICVYTNASITLE 185
Query: 184 TL 185
+
Sbjct: 186 KI 187
>gi|88799637|ref|ZP_01115213.1| ATP-dependent protease peptidase subunit [Reinekea sp. MED297]
gi|88777722|gb|EAR08921.1| ATP-dependent protease peptidase subunit [Reinekea sp. MED297]
Length = 172
Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats.
Identities = 107/171 (62%), Positives = 137/171 (80%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VR+D VV+AGDGQVSLG TVMK NARKVRRL +IAGFAG +ADAFTL E+
Sbjct: 2 TTIVAVRRDDQVVVAGDGQVSLGNTVMKGNARKVRRLYHNKVIAGFAGGTADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E L+Q+ L R++VELAK+WR D+ LR LEAM+++AD +L+I+G GDV+EPE+GV+
Sbjct: 62 ESHLQQHSGHLTRAAVELAKEWRSDRALRRLEAMLIVADAEASLLISGTGDVVEPEHGVV 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YAL+AARAL +T+ A+ IA K++ +AADICVYTNHN V+E L
Sbjct: 122 AIGSGGNYALAAARALFDNTELDAKTIAEKSLDLAADICVYTNHNTVIEAL 172
>gi|269140777|ref|YP_003297478.1| ATP-dependent protease peptidase subunit [Edwardsiella tarda
EIB202]
gi|294638264|ref|ZP_06716517.1| ATP-dependent protease HslVU, peptidase subunit [Edwardsiella tarda
ATCC 23685]
gi|267986438|gb|ACY86267.1| ATP-dependent protease peptidase subunit [Edwardsiella tarda
EIB202]
gi|291088517|gb|EFE21078.1| ATP-dependent protease HslVU, peptidase subunit [Edwardsiella tarda
ATCC 23685]
Length = 176
Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats.
Identities = 98/172 (56%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGKVVIGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA +AARAL+ +T+ A +I KA+ IA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGARDIVEKALGIAGDICIYTNQFHTIEELD 173
>gi|225677228|ref|ZP_03788221.1| ATP-dependent protease peptidase subunit [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590752|gb|EEH11986.1| ATP-dependent protease peptidase subunit [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 184
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 121/181 (66%), Positives = 155/181 (85%), Gaps = 1/181 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H KM+ TTIL++RKD VV+ GDGQVSLG TV+K+ A+KVRRL ++IAGFAG++A
Sbjct: 3 QHDNNKMYGTTILSIRKDKSVVVIGDGQVSLGHTVIKSGAKKVRRLSGDSVIAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ERLE KL+++P QL+R+ VELAKDWRMDKYLR LEAM+++ADK+I+LVITG GD
Sbjct: 63 DAFTLFERLESKLDKHPGQLVRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE+G+ AIGSGG++ALSAARAL+ + S EEIA+KAM IAADICVYTNHN+++E +
Sbjct: 123 VLEPEDGIAAIGSGGNFALSAARALIDIKGISIEEIAKKAMKIAADICVYTNHNVIIEKI 182
Query: 186 K 186
+
Sbjct: 183 E 183
>gi|167625771|ref|YP_001676065.1| ATP-dependent protease peptidase subunit [Shewanella halifaxensis
HAW-EB4]
gi|189036238|sp|B0TVV3|HSLV_SHEHH RecName: Full=ATP-dependent protease subunit HslV
gi|167355793|gb|ABZ78406.1| 20S proteasome A and B subunits [Shewanella halifaxensis HAW-EB4]
Length = 174
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 104/172 (60%), Positives = 134/172 (77%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L+R++VE+AKDWR DK LR LEA++ +AD +L+ITG GDV++PEN ++
Sbjct: 62 EAKLEMHQGHLMRAAVEMAKDWRSDKVLRKLEALLAVADAESSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A SAA AL+ +T SA EIA K+++IA DICV+TN +E LK
Sbjct: 122 AIGSGGAFAQSAATALLENTDLSALEIAEKSLTIAGDICVFTNQFKTIEELK 173
>gi|290968893|ref|ZP_06560430.1| ATP-dependent protease HslVU, peptidase subunit [Megasphaera
genomosp. type_1 str. 28L]
gi|290781189|gb|EFD93780.1| ATP-dependent protease HslVU, peptidase subunit [Megasphaera
genomosp. type_1 str. 28L]
Length = 187
Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats.
Identities = 107/185 (57%), Positives = 142/185 (76%), Gaps = 2/185 (1%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGS 64
+++ A HATTI+ V+++G IAGDGQV+LG V MKA ARKVRRL G II+GFAGS
Sbjct: 2 NEYMATDFHATTIVAVQRNGQTAIAGDGQVTLGNAVIMKATARKVRRLYNGKIISGFAGS 61
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
ADAF L +R E KL ++ L+RS+VELAKDWR DK L LEA++L+AD L+I+G
Sbjct: 62 VADAFALFDRFEGKLNEHNGNLVRSAVELAKDWRSDKILHKLEALLLVADAERILLISGN 121
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLE 183
G+V+EP++G+ AIGSGG+YAL+A RAL+ +T SA++IA KA+ IAADICVYTNHN+++E
Sbjct: 122 GEVIEPDDGLTAIGSGGNYALAAGRALLQNTDLSAQDIALKALHIAADICVYTNHNVIVE 181
Query: 184 TLKVG 188
+K
Sbjct: 182 EIKKE 186
>gi|227113219|ref|ZP_03826875.1| ATP-dependent protease peptidase subunit [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
gi|227327578|ref|ZP_03831602.1| ATP-dependent protease peptidase subunit [Pectobacterium
carotovorum subsp. carotovorum WPP14]
gi|253686573|ref|YP_003015763.1| 20S proteasome A and B subunits [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259491394|sp|C6DHM7|HSLV_PECCP RecName: Full=ATP-dependent protease subunit HslV
gi|251753151|gb|ACT11227.1| 20S proteasome A and B subunits [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 176
Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats.
Identities = 97/171 (56%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYHDRVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A +I K++ IA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGARDIVEKSLGIAGDICIYTNQFHTIEEL 172
>gi|197103499|ref|YP_002128876.1| heat shock protein HslV [Phenylobacterium zucineum HLK1]
gi|196476919|gb|ACG76447.1| heat shock protein HslV [Phenylobacterium zucineum HLK1]
Length = 182
Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats.
Identities = 113/182 (62%), Positives = 144/182 (79%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + H TTIL VRK+G V+AGDGQVS+GQT++K +A+KVRRL G +IAGFAG
Sbjct: 1 MSNTSTFPDWHGTTILAVRKNGKTVVAGDGQVSMGQTIVKGSAKKVRRLAGGRVIAGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
S+ADAFTL+ERLE KLEQYP QL R+ V+LAKDWR D+YLR LEAM+++A++ +TG
Sbjct: 61 STADAFTLIERLEAKLEQYPEQLARACVDLAKDWRTDRYLRRLEAMLIVANQEQIFTVTG 120
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
+GDVLEPE+GV AIGSGG +AL+AARAL+ T AE +AR+AM+IAA+ICVYTN + +E
Sbjct: 121 VGDVLEPEHGVAAIGSGGIFALAAARALVDTDLDAETVARRAMAIAAEICVYTNGELTVE 180
Query: 184 TL 185
L
Sbjct: 181 AL 182
>gi|312143682|ref|YP_003995128.1| 20S proteasome A and B subunits [Halanaerobium sp. 'sapolanicus']
gi|311904333|gb|ADQ14774.1| 20S proteasome A and B subunits [Halanaerobium sp. 'sapolanicus']
Length = 189
Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats.
Identities = 101/181 (55%), Positives = 133/181 (73%), Gaps = 2/181 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ ATTI+ VR + + +AGDGQV+LG TVMK+ A+KVRRL G I+AGFAG+SADAFT
Sbjct: 4 TEFEATTIVAVRHNNCMALAGDGQVTLGNTVMKSTAKKVRRLYNGEILAGFAGTSADAFT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KLE+Y L R++VELAK+WR DK LR LEA++++A+ L+I+G GDV+EP
Sbjct: 64 LFEKFEAKLEEYHGSLQRAAVELAKEWRTDKILRKLEALLIVANLEEILIISGNGDVIEP 123
Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+ + AIGSGG YA +AA AL + SA +IAR+A+ IAA IC+YTN NI LE L G
Sbjct: 124 DANISAIGSGGPYARAAASALSNHGNDLSAGDIAREALQIAASICIYTNENITLEELDGG 183
Query: 189 D 189
+
Sbjct: 184 E 184
>gi|148514134|gb|ABQ80994.1| 20S proteasome, A and B subunits [Pseudomonas putida F1]
gi|166862527|gb|ABZ00935.1| 20S proteasome A and B subunits [Pseudomonas putida GB-1]
Length = 192
Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats.
Identities = 104/175 (59%), Positives = 141/175 (80%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 18 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVIAGFAGATADAFTLFERF 77
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 78 EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 137
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+GSGG+YA +AARAL++ T SA EIA A++IA DICV+TNHN+ +E + D
Sbjct: 138 AMGSGGAYAQAAARALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAD 192
>gi|120609504|ref|YP_969182.1| ATP-dependent protease peptidase subunit [Acidovorax citrulli
AAC00-1]
gi|120587968|gb|ABM31408.1| HslV component of HslUV peptidase [Acidovorax citrulli AAC00-1]
Length = 194
Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats.
Identities = 101/180 (56%), Positives = 137/180 (76%), Gaps = 6/180 (3%)
Query: 12 KMHATTILTVRKDG-----VVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+ H TTIL+VR+ V I GDGQV+LG V+K +ARKVR+L G ++AGFAG++A
Sbjct: 15 QFHGTTILSVRRQAADGTIQVAIGGDGQVTLGNIVVKGSARKVRKLHHGKVLAGFAGATA 74
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ER E KLE++ L R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GD
Sbjct: 75 DAFTLFERFEGKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADASASLIITGNGD 134
Query: 127 VLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE G++AIGSGG+YA SAA+AL+ T+ SAEEI RK+++IA ++C+YTN + +ETL
Sbjct: 135 VLEPEQGIVAIGSGGAYAHSAAKALLNHTELSAEEIVRKSLAIAGELCIYTNMHHTVETL 194
>gi|27364752|ref|NP_760280.1| ATP-dependent protease subunit HslV [Vibrio vulnificus CMCP6]
gi|37681199|ref|NP_935808.1| ATP-dependent protease peptidase subunit [Vibrio vulnificus YJ016]
gi|31340167|sp|Q8DCP3|HSLV_VIBVU RecName: Full=ATP-dependent protease subunit HslV
gi|47605633|sp|Q7MH57|HSLV_VIBVY RecName: Full=ATP-dependent protease subunit HslV
gi|27360897|gb|AAO09807.1| ATP-dependent protease hslV [Vibrio vulnificus CMCP6]
gi|37199950|dbj|BAC95779.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio vulnificus
YJ016]
Length = 184
Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats.
Identities = 105/176 (59%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG+YA +AA AL+ +T+ A EIA KA++IA DICV+TNHN +E L++ E
Sbjct: 122 AIGSGGAYAQAAATALLENTELDAREIAEKALNIAGDICVFTNHNHTIEELEIPAE 177
>gi|225874218|ref|YP_002755677.1| ATP-dependent protease HslV [Acidobacterium capsulatum ATCC 51196]
gi|225793905|gb|ACO33995.1| ATP-dependent protease HslV [Acidobacterium capsulatum ATCC 51196]
Length = 204
Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats.
Identities = 102/179 (56%), Positives = 136/179 (75%), Gaps = 1/179 (0%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
A ++ +TT++ VR+ VV+A DGQV++G V+K +ARKVRRL + ++AGFAGS+ADAF
Sbjct: 26 APRIRSTTVICVRRGNSVVMAADGQVTMGDAVIKQSARKVRRLYQDKVLAGFAGSTADAF 85
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+L R E KLEQ+ L R++VELAKDWR DK LRNLEA++++AD +I G GDV+E
Sbjct: 86 SLFGRFEGKLEQHAGNLGRAAVELAKDWRTDKMLRNLEALLIVADPHQMFLIGGAGDVIE 145
Query: 130 PENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
P+ GV AIGSGGSYA++AARAL+ +T SA EIA KA+ IA DIC+YTN +I LE L+
Sbjct: 146 PDEGVTAIGSGGSYAMAAARALLENTDLSAREIAEKALRIAGDICIYTNGHITLEELQA 204
>gi|327398618|ref|YP_004339487.1| ATP-dependent protease hslV [Hippea maritima DSM 10411]
gi|327181247|gb|AEA33428.1| ATP-dependent protease hslV [Hippea maritima DSM 10411]
Length = 179
Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 97/175 (55%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI+ V+KD V I GDGQV+LG TV+K+NA+K+R+L + GFAG++ADAFTL
Sbjct: 3 QFKGTTIICVKKDNQVAIGGDGQVTLGSTVIKSNAKKIRKLYNDKVAVGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+LE KL +Y L R++VELAK+WR DK LR LEAM++ ADK +I+G GDVL P+
Sbjct: 63 FEKLEDKLNEYAGNLTRAAVELAKEWRTDKILRRLEAMLIAADKDSIYLISGNGDVLSPD 122
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG+YALSAA+A++ T +AE IA++++ IA++IC+YTN+NI +ETL
Sbjct: 123 EDVCAIGSGGNYALSAAKAMIRFTSLNAETIAKESLKIASEICIYTNNNITIETL 177
>gi|154251692|ref|YP_001412516.1| ATP-dependent protease peptidase subunit [Parvibaculum
lavamentivorans DS-1]
gi|189028454|sp|A7HSH6|HSLV_PARL1 RecName: Full=ATP-dependent protease subunit HslV
gi|154155642|gb|ABS62859.1| 20S proteasome A and B subunits [Parvibaculum lavamentivorans DS-1]
Length = 182
Score = 287 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 123/180 (68%), Positives = 149/180 (82%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ + H TTILTVRK G VVIAGDGQVS+G T+MK NARKVR LGKG++IAGFAG++AD
Sbjct: 3 NDPINWHGTTILTVRKGGKVVIAGDGQVSMGDTIMKGNARKVRPLGKGDVIAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
A TL ERLE K+EQYP QL R+ VELAKDWR D++LR LEA++++ADK TLV+TG GDV
Sbjct: 63 AMTLFERLEAKIEQYPGQLTRACVELAKDWRTDRFLRRLEALMIVADKEATLVLTGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
LEPE+GV+ IGSGG+YAL+AARAL+ SAEEIARKAM IAA ICVYTN+N+ +E+L
Sbjct: 123 LEPESGVVGIGSGGNYALAAARALIDMDLSAEEIARKAMGIAASICVYTNNNLTVESLDA 182
>gi|328545936|ref|YP_004306045.1| ATP-dependent protease subunit HslV [polymorphum gilvum
SL003B-26A1]
gi|326415676|gb|ADZ72739.1| ATP-dependent protease subunit HslV [Polymorphum gilvum
SL003B-26A1]
Length = 186
Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats.
Identities = 128/182 (70%), Positives = 150/182 (82%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M +H H TTIL VRKDG VVIAGDGQVSLGQTV+K ARKVR L KG +I GFAG
Sbjct: 1 MSAEHGPAVWHGTTILMVRKDGRVVIAGDGQVSLGQTVIKNTARKVRPLAKGEVIGGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTL ERLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+ADK+++LV+TG
Sbjct: 61 ATADAFTLFERLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKSVSLVLTG 120
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE GVM IGSGG+YAL+AARAL+ AE IAR+AM+IAADICVYTN NI++E
Sbjct: 121 TGDVLEPEGGVMGIGSGGNYALAAARALIDGDLDAEAIARRAMTIAADICVYTNGNILVE 180
Query: 184 TL 185
+L
Sbjct: 181 SL 182
>gi|310828088|ref|YP_003960445.1| 20S proteasome A and B [Eubacterium limosum KIST612]
gi|308739822|gb|ADO37482.1| 20S proteasome A and B [Eubacterium limosum KIST612]
Length = 177
Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats.
Identities = 102/176 (57%), Positives = 137/176 (77%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ VR +G V IAGDGQV++G+T +MKA A+KVR++ ++ GFAGS ADAFTL
Sbjct: 2 FHATTIVGVRHNGEVAIAGDGQVTMGETTIMKATAKKVRKIYNDQVLVGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E K+EQY L R++VELAKDWR DK LR LEA++++ DK TLV++G G+V+EP+
Sbjct: 62 CERFEHKIEQYNGNLQRAAVELAKDWRQDKALRKLEALLIVMDKKETLVLSGSGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ + AIGSGG+YALSAARAL + SA+EIA +++ IA++ICVYTN NI +E L+
Sbjct: 122 DDIAAIGSGGNYALSAARALKRHSNLSAKEIAHESLKIASEICVYTNDNIRVEELE 177
>gi|241765139|ref|ZP_04763127.1| 20S proteasome A and B subunits [Acidovorax delafieldii 2AN]
gi|241365218|gb|EER60065.1| 20S proteasome A and B subunits [Acidovorax delafieldii 2AN]
Length = 189
Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats.
Identities = 100/189 (52%), Positives = 136/189 (71%), Gaps = 5/189 (2%)
Query: 2 VVMGDKHYAVKMHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI 57
+ M H TTIL+VR+ V I GDGQV+LG V+K ARKVR+L G +
Sbjct: 1 MAMDSSSQTPVFHGTTILSVRRQTPGGVQVAIGGDGQVTLGNIVVKGTARKVRKLYHGKV 60
Query: 58 IAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI 117
+AGFAG++ADAFTL ER E KLE++ L R+++EL KDWR D+ LR LEAM+ +AD +
Sbjct: 61 LAGFAGATADAFTLFERFEAKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADASA 120
Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYT 176
+L+ITG GDVLEPE G++AIGSGG+YA SAA+AL+ +T SA+EI +K++ IA ++C+YT
Sbjct: 121 SLIITGNGDVLEPEQGIVAIGSGGAYAHSAAKALLVNTDLSAQEIVKKSLEIAGELCIYT 180
Query: 177 NHNIVLETL 185
N + +ETL
Sbjct: 181 NMSHTIETL 189
>gi|117923335|ref|YP_863952.1| ATP-dependent protease peptidase subunit [Magnetococcus sp. MC-1]
gi|189028451|sp|A0L3K3|HSLV_MAGSM RecName: Full=ATP-dependent protease subunit HslV
gi|117607091|gb|ABK42546.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Magnetococcus sp. MC-1]
Length = 178
Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats.
Identities = 99/174 (56%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL+VR+ VV+ GDGQVS+G TV K+NARKVR + G ++AGFAGS+ADAFTL
Sbjct: 2 FKGTTILSVRRGNHVVMGGDGQVSIGNTVAKSNARKVRLMSDGKVLAGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KL ++ L R++VE+AKDWR D+ LR LEAM+ +AD+ +L+I+G GDVLEPE
Sbjct: 62 ERFEGKLSKHGGNLTRAAVEMAKDWRTDRVLRRLEAMLAVADEHCSLLISGNGDVLEPEE 121
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV+AIGSGG YALSAARAL+ T + +I ++ +AA+ICV+TN+N+ +E L
Sbjct: 122 GVIAIGSGGPYALSAARALLRHTSLNPRQIVESSLEVAAEICVFTNNNLTIEEL 175
>gi|229587960|ref|YP_002870079.1| ATP-dependent protease peptidase subunit [Pseudomonas fluorescens
SBW25]
gi|312958528|ref|ZP_07773048.1| ATP-dependent protease [Pseudomonas fluorescens WH6]
gi|259491395|sp|C3KAH1|HSLV_PSEFS RecName: Full=ATP-dependent protease subunit HslV
gi|229359826|emb|CAY46676.1| ATP-dependent protease [Pseudomonas fluorescens SBW25]
gi|311287071|gb|EFQ65632.1| ATP-dependent protease [Pseudomonas fluorescens WH6]
Length = 176
Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats.
Identities = 100/175 (57%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+GSGG YA +AA AL+ T SA EI A+ IA DICV+TNHN +E + +
Sbjct: 122 AMGSGGGYAQAAASALLKKTDLSAREIVETALGIAGDICVFTNHNQTIEEQDLAE 176
>gi|157373671|ref|YP_001472271.1| ATP-dependent protease peptidase subunit [Shewanella sediminis
HAW-EB3]
gi|189036240|sp|A8FQM0|HSLV_SHESH RecName: Full=ATP-dependent protease subunit HslV
gi|157316045|gb|ABV35143.1| 20S proteasome, A and B subunits [Shewanella sediminis HAW-EB3]
Length = 174
Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats.
Identities = 102/171 (59%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L++++VE+AKDWR DK LR LEA++ +AD T +L+ITG GDV++PEN ++
Sbjct: 62 EAKLEMHQGHLMKAAVEMAKDWRSDKMLRKLEALLAVADDTCSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+IGSGG++A SAA AL+ +T+ SA EIA K+++IA DICV+TN +E L
Sbjct: 122 SIGSGGNFAQSAATALLENTELSALEIAEKSLTIAGDICVFTNQFKTIEEL 172
>gi|152998124|ref|YP_001342959.1| ATP-dependent protease peptidase subunit [Marinomonas sp. MWYL1]
gi|189028452|sp|A6W2U5|HSLV_MARMS RecName: Full=ATP-dependent protease subunit HslV
gi|150839048|gb|ABR73024.1| 20S proteasome A and B subunits [Marinomonas sp. MWYL1]
Length = 183
Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats.
Identities = 105/174 (60%), Positives = 142/174 (81%), Gaps = 1/174 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTILTVRK VV+ GDGQVSLG TVMK NARKVRRL +G +IAGFAG +ADAFTL ER
Sbjct: 2 TTILTVRKGNQVVVGGDGQVSLGNTVMKGNARKVRRLYRGEVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++V+LAKDWR D+ LR LEAM+++A+K TL+ITG GDV+EP++G +
Sbjct: 62 EGQLEKHQGHLVRAAVDLAKDWRSDRALRKLEAMLIVANKESTLIITGTGDVVEPQHGAL 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG++A +AARAL+ +T +A+EI K+++IAADICV+TNH++ +E + +
Sbjct: 122 AIGSGGNFAEAAARALIDNTDLTAKEIVEKSLNIAADICVFTNHSLTIEEITID 175
>gi|126460958|ref|YP_001042072.1| ATP-dependent protease peptidase subunit [Rhodobacter sphaeroides
ATCC 17029]
gi|189036233|sp|A3PG34|HSLV_RHOS1 RecName: Full=ATP-dependent protease subunit HslV
gi|126102622|gb|ABN75300.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodobacter sphaeroides ATCC 17029]
Length = 185
Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats.
Identities = 123/185 (66%), Positives = 146/185 (78%), Gaps = 3/185 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M + + H TTIL VR+ G VV+AGDGQVSLGQTV+K ARKVRRL G ++AGF
Sbjct: 1 MAEDRFP-GWHGTTILAVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHEVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLEKKLE P QL R+ V+LAKDWRMDKYLRNLEAM+++ D LV+
Sbjct: 60 AGSTADAFTLLERLEKKLEAAPGQLARACVQLAKDWRMDKYLRNLEAMLIVTDGETLLVL 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR LM+T AEEIARKAM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNFALAAARGLMATDLPAEEIARKAMAIAADICVYTNGNLT 179
Query: 182 LETLK 186
+E +
Sbjct: 180 VERIS 184
>gi|57239495|ref|YP_180631.1| ATP-dependent protease peptidase subunit [Ehrlichia ruminantium
str. Welgevonden]
gi|58579475|ref|YP_197687.1| ATP-dependent protease peptidase subunit [Ehrlichia ruminantium
str. Welgevonden]
gi|81557267|sp|Q5HAB3|HSLV_EHRRW RecName: Full=ATP-dependent protease subunit HslV
gi|57161574|emb|CAH58502.1| ATP-dependent protease HslV [Ehrlichia ruminantium str.
Welgevonden]
gi|58418101|emb|CAI27305.1| ATP-dependent protease hslV [Ehrlichia ruminantium str.
Welgevonden]
Length = 189
Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats.
Identities = 111/187 (59%), Positives = 148/187 (79%), Gaps = 6/187 (3%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
+ KM+ TTIL +R++ V+IAGDGQVSLG TVMK +A+KV+RL +I GFAG++
Sbjct: 2 EHKDNSKMYGTTILCIRRNNHVIIAGDGQVSLGHTVMKNSAKKVKRLANDTVITGFAGAT 61
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTL ERLE KLE++P QLLR+ VELAKDWRMD+YLR LEAM+++ADK+++LVI+G G
Sbjct: 62 ADAFTLFERLEGKLEKHPGQLLRACVELAKDWRMDRYLRRLEAMMIVADKSVSLVISGNG 121
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMST------QNSAEEIARKAMSIAADICVYTNHN 179
DVLEPENG+ AIGSGG+YAL+AA+AL + + E I AM+IAA+IC+YTN+N
Sbjct: 122 DVLEPENGIAAIGSGGNYALAAAKALCESNDKFSQNMTLEYIVTTAMNIAAEICIYTNNN 181
Query: 180 IVLETLK 186
I++E ++
Sbjct: 182 IIMEKIE 188
>gi|254251130|ref|ZP_04944448.1| protease HslVU [Burkholderia dolosa AUO158]
gi|124893739|gb|EAY67619.1| protease HslVU [Burkholderia dolosa AUO158]
Length = 211
Score = 286 bits (734), Expect = 6e-76, Method: Composition-based stats.
Identities = 98/176 (55%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 36 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 95
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD TLVITG GDVL+PE
Sbjct: 96 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADANTTLVITGNGDVLDPE 155
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ S +I K++ IA D+C+YTNHN ++ET++
Sbjct: 156 GGICAIGSGGAYAQAAARALAENTELSPRQIVEKSLEIAGDMCIYTNHNRIIETIE 211
>gi|254502215|ref|ZP_05114366.1| peptidase, T1 family [Labrenzia alexandrii DFL-11]
gi|222438286|gb|EEE44965.1| peptidase, T1 family [Labrenzia alexandrii DFL-11]
Length = 186
Score = 286 bits (734), Expect = 7e-76, Method: Composition-based stats.
Identities = 123/186 (66%), Positives = 146/186 (78%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + H TTI+ VRK G VVIAGDGQVSLGQTV+K ARKVR L KG +IAGFAG
Sbjct: 1 MSESREPAVWHGTTIMMVRKGGKVVIAGDGQVSLGQTVIKHTARKVRPLAKGEVIAGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTL ERLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+ADK +LV+TG
Sbjct: 61 ATADAFTLFERLESKLEQYPGQLMRACVELAKDWRTDRYLRKLEAMMLVADKNTSLVLTG 120
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE G+M IGSGG+YAL+A RAL T AE IARKAM++AA+ICVYTN +I +E
Sbjct: 121 TGDVLEPEGGIMGIGSGGNYALAAGRALAETDFDAETIARKAMAVAAEICVYTNESITVE 180
Query: 184 TLKVGD 189
L+ +
Sbjct: 181 VLETAE 186
>gi|167649009|ref|YP_001686672.1| ATP-dependent protease peptidase subunit [Caulobacter sp. K31]
gi|189028424|sp|B0T7B0|HSLV_CAUSK RecName: Full=ATP-dependent protease subunit HslV
gi|167351439|gb|ABZ74174.1| 20S proteasome A and B subunits [Caulobacter sp. K31]
Length = 187
Score = 286 bits (734), Expect = 7e-76, Method: Composition-based stats.
Identities = 117/187 (62%), Positives = 144/187 (77%), Gaps = 5/187 (2%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + + H TTIL VRK+G VIAGDGQVS+G TV+K NARKVRRL G ++AGFAG
Sbjct: 1 MQNSNSFPDWHGTTILAVRKNGSTVIAGDGQVSMGPTVVKGNARKVRRLAGGKVVAGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTL+ERLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+AD +TG
Sbjct: 61 ATADAFTLIERLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADADSIFTVTG 120
Query: 124 MGDVLEPEN-----GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH 178
+GDVLEP V AIGSGG+YAL+AA+AL+ +AEEIARKAM IAA+ICVYTN
Sbjct: 121 VGDVLEPGESTGGGSVAAIGSGGNYALAAAKALIDQDLTAEEIARKAMGIAAEICVYTNG 180
Query: 179 NIVLETL 185
N+ +E+L
Sbjct: 181 NLTVESL 187
>gi|310822321|ref|YP_003954679.1| ATP-dependent protease hslv [Stigmatella aurantiaca DW4/3-1]
gi|309395393|gb|ADO72852.1| ATP-dependent protease HslV [Stigmatella aurantiaca DW4/3-1]
Length = 175
Score = 286 bits (734), Expect = 8e-76, Method: Composition-based stats.
Identities = 106/174 (60%), Positives = 138/174 (79%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL VR++G VVIAGDGQVSL +T+MK A+KVRR+G+GN++AGFAGS+ADAFTL
Sbjct: 2 FHGTTILCVRREGKVVIAGDGQVSLDKTIMKNTAKKVRRIGEGNVLAGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KL+++ L R+ VEL KDWR D++LR LEA++++AD+ T +++G GDV+EP++
Sbjct: 62 ERFEAKLKEHQKNLARACVELGKDWRTDRFLRRLEALLIVADREKTFILSGAGDVIEPDH 121
Query: 133 GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ A+GSGG YALSAARAL T SA EIA AM+IAADICVYTN ++ E L
Sbjct: 122 GIAAVGSGGHYALSAARALQAHTSLSAREIATHAMAIAADICVYTNSHVTFEEL 175
>gi|218898983|ref|YP_002447394.1| ATP-dependent protease hslV [Bacillus cereus G9842]
gi|228902333|ref|ZP_04066490.1| ATP-dependent protease hslV [Bacillus thuringiensis IBL 4222]
gi|228909655|ref|ZP_04073478.1| ATP-dependent protease hslV [Bacillus thuringiensis IBL 200]
gi|228940918|ref|ZP_04103477.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228966775|ref|ZP_04127819.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228973847|ref|ZP_04134423.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980437|ref|ZP_04140747.1| ATP-dependent protease hslV [Bacillus thuringiensis Bt407]
gi|229098299|ref|ZP_04229246.1| ATP-dependent protease hslV [Bacillus cereus Rock3-29]
gi|229104392|ref|ZP_04235061.1| ATP-dependent protease hslV [Bacillus cereus Rock3-28]
gi|229117316|ref|ZP_04246694.1| ATP-dependent protease hslV [Bacillus cereus Rock1-3]
gi|226704534|sp|B7IUI9|HSLV_BACC2 RecName: Full=ATP-dependent protease subunit HslV
gi|218544388|gb|ACK96782.1| ATP-dependent protease hslV [Bacillus cereus G9842]
gi|228666216|gb|EEL21680.1| ATP-dependent protease hslV [Bacillus cereus Rock1-3]
gi|228679090|gb|EEL33298.1| ATP-dependent protease hslV [Bacillus cereus Rock3-28]
gi|228685197|gb|EEL39128.1| ATP-dependent protease hslV [Bacillus cereus Rock3-29]
gi|228779257|gb|EEM27514.1| ATP-dependent protease hslV [Bacillus thuringiensis Bt407]
gi|228785872|gb|EEM33875.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228792874|gb|EEM40432.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228818754|gb|EEM64820.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228849944|gb|EEM94775.1| ATP-dependent protease hslV [Bacillus thuringiensis IBL 200]
gi|228857302|gb|EEN01805.1| ATP-dependent protease hslV [Bacillus thuringiensis IBL 4222]
gi|326941599|gb|AEA17495.1| ATP-dependent protease peptidase subunit [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 180
Score = 286 bits (734), Expect = 8e-76, Method: Composition-based stats.
Identities = 100/177 (56%), Positives = 132/177 (74%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G VMK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRRLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA RAL +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 180
>gi|157963593|ref|YP_001503627.1| ATP-dependent protease peptidase subunit [Shewanella pealeana ATCC
700345]
gi|189036239|sp|A8H955|HSLV_SHEPA RecName: Full=ATP-dependent protease subunit HslV
gi|157848593|gb|ABV89092.1| 20S proteasome A and B subunits [Shewanella pealeana ATCC 700345]
Length = 174
Score = 286 bits (734), Expect = 8e-76, Method: Composition-based stats.
Identities = 103/172 (59%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAGS+ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGSTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L+R++VE+AKDWR DK LR LEA++ +AD +L+ITG GDV++PEN ++
Sbjct: 62 EAKLEMHQGHLMRAAVEMAKDWRSDKVLRKLEALLAVADAESSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A SAA AL+ +T SA EIA K+++IA +ICV+TN +E LK
Sbjct: 122 AIGSGGAFAQSAATALLENTDLSALEIAEKSLTIAGNICVFTNQFKTIEELK 173
>gi|315125399|ref|YP_004067402.1| ATP-dependent protease peptidase subunit [Pseudoalteromonas sp.
SM9913]
gi|315013912|gb|ADT67250.1| ATP-dependent protease peptidase subunit [Pseudoalteromonas sp.
SM9913]
Length = 172
Score = 286 bits (733), Expect = 8e-76, Method: Composition-based stats.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+D VVI GDGQVSLG TVMK NARKVRRL G +IAGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRDDKVVIGGDGQVSLGNTVMKGNARKVRRLYNGKVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L +++VE+AKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLEMHQGNLTKAAVEMAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T SA EI K+++IA +ICV+TN+ +E L
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAREIVEKSLTIAGNICVFTNNFQTIEEL 172
>gi|126734391|ref|ZP_01750138.1| 20S proteasome, A and B subunits [Roseobacter sp. CCS2]
gi|126717257|gb|EBA14121.1| 20S proteasome, A and B subunits [Roseobacter sp. CCS2]
Length = 185
Score = 286 bits (733), Expect = 8e-76, Method: Composition-based stats.
Identities = 121/186 (65%), Positives = 146/186 (78%), Gaps = 3/186 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M + + H TTI+ VRK G VVIAGDGQVSLGQTV+K ARKVRRL G ++I GF
Sbjct: 1 MASEEFP-GWHGTTIIGVRKGGQVVIAGDGQVSLGQTVIKGTARKVRRLSPGGQDVICGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLEKKLE P QL R+S+ELAKDWR DKYL+ LEAM++++D + VI
Sbjct: 60 AGSTADAFTLLERLEKKLEATPGQLARASIELAKDWRTDKYLQKLEAMLIVSDGSELFVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ + AIGSGG+YAL+A RALM T+ AE IAR+AM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDIAAIGSGGNYALAAGRALMDTKKDAETIAREAMAIAADICVYTNGNLT 179
Query: 182 LETLKV 187
+E +K
Sbjct: 180 VEAIKA 185
>gi|183221726|ref|YP_001839722.1| ATP-dependent protease peptidase subunit [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189911801|ref|YP_001963356.1| ATP-dependent protease peptidase subunit [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|259491391|sp|B0SCD1|HSLV_LEPBA RecName: Full=ATP-dependent protease subunit HslV
gi|259491392|sp|B0SKV3|HSLV_LEPBP RecName: Full=ATP-dependent protease subunit HslV
gi|167776477|gb|ABZ94778.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167780148|gb|ABZ98446.1| Heat shock protein, HslVU, proteasome-related peptidase subunit
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 177
Score = 286 bits (733), Expect = 9e-76, Method: Composition-based stats.
Identities = 102/174 (58%), Positives = 139/174 (79%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+HATTIL+VRK+G + + GDGQVS+G TVMK A+KVRRL G +IAGFAGS+ADAFTL
Sbjct: 4 IHATTILSVRKNGKIAVGGDGQVSMGNTVMKHTAKKVRRLYNGKVIAGFAGSAADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E EKKL ++ + R++VELA++WRMD+ LR LEA++++ D + +I+G GDV+ P++
Sbjct: 64 ELFEKKLIEHGGSVSRAAVELAREWRMDRMLRRLEALLIVCDANESFLISGTGDVISPDD 123
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV+AIGSGG++ALSAARAL+ +T +EI KAM+I ADIC+YTNHN+V+E L
Sbjct: 124 GVLAIGSGGNFALSAARALVENTDLDPKEIITKAMNITADICIYTNHNLVIEEL 177
>gi|332532292|ref|ZP_08408172.1| ATP-dependent protease HslV [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038159|gb|EGI74605.1| ATP-dependent protease HslV [Pseudoalteromonas haloplanktis
ANT/505]
Length = 172
Score = 286 bits (733), Expect = 9e-76, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VVI GDGQVSLG TVMK NARKVRRL G +IAGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGDKVVIGGDGQVSLGNTVMKGNARKVRRLYNGKVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L +++VE+AKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLEMHQGNLTKAAVEMAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T SA EI K+++IA +ICV+TN+ +E L
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAREIVEKSLTIAGNICVFTNNFQTIEEL 172
>gi|77361645|ref|YP_341220.1| ATP-dependent protease peptidase subunit [Pseudoalteromonas
haloplanktis TAC125]
gi|76876556|emb|CAI87778.1| peptidase component of the HslUV protease [Pseudoalteromonas
haloplanktis TAC125]
Length = 172
Score = 286 bits (733), Expect = 9e-76, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VVI GDGQVSLG TVMK NARKVRRL G +IAGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGNNVVIGGDGQVSLGNTVMKGNARKVRRLYNGKVIAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L +++VE+AKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLEMHQGNLTKAAVEMAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T SA EI K+++IA +ICV+TN +E L
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAREIVEKSLTIAGNICVFTNDFQTIEEL 172
>gi|58617529|ref|YP_196728.1| ATP-dependent protease peptidase subunit [Ehrlichia ruminantium
str. Gardel]
gi|75432728|sp|Q5FGD0|HSLV_EHRRG RecName: Full=ATP-dependent protease subunit HslV
gi|58417141|emb|CAI28254.1| ATP-dependent protease hslV [Ehrlichia ruminantium str. Gardel]
Length = 189
Score = 286 bits (733), Expect = 9e-76, Method: Composition-based stats.
Identities = 110/187 (58%), Positives = 148/187 (79%), Gaps = 6/187 (3%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
+ KM+ TTIL +R++ V+IAGDGQVSLG TVMK +A+KV+RL +I GFAG++
Sbjct: 2 EHKDNSKMYGTTILCIRRNNNVIIAGDGQVSLGHTVMKNSAKKVKRLANDTVITGFAGAT 61
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTL ERLE KLE++P QLLR+ VELAKDWRMD+YLR LEAM+++ADK+++L+I+G G
Sbjct: 62 ADAFTLFERLEGKLEKHPGQLLRACVELAKDWRMDRYLRRLEAMMIVADKSVSLIISGNG 121
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMST------QNSAEEIARKAMSIAADICVYTNHN 179
DVLEPENG+ AIGSGG+YAL+AA+AL + + E I AM+IAA+IC+YTN+N
Sbjct: 122 DVLEPENGIAAIGSGGNYALAAAKALCESNDKFSQNMTLEYIVTTAMNIAAEICIYTNNN 181
Query: 180 IVLETLK 186
I++E ++
Sbjct: 182 IIMEKIE 188
>gi|182677249|ref|YP_001831395.1| ATP-dependent protease peptidase subunit [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182633132|gb|ACB93906.1| 20S proteasome A and B subunits [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 197
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 117/189 (61%), Positives = 143/189 (75%), Gaps = 4/189 (2%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
H TTIL V+K G VI GDGQV+LGQT++K NARKVRRL KG++I GFA
Sbjct: 9 AFSQASSPESWHGTTILMVKKGGRTVIGGDGQVTLGQTIVKGNARKVRRLSKGDVIGGFA 68
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL ERLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+ADK LV+T
Sbjct: 69 GATADAFTLFERLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKQAGLVLT 128
Query: 123 GMGDVLEPE----NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH 178
G GDVLEPE VM IGSGG+YAL+A RAL++T+ AE I RK++ IAADICVYTN
Sbjct: 129 GTGDVLEPEMTEQGSVMGIGSGGNYALAAGRALLATEFDAETITRKSLEIAADICVYTNR 188
Query: 179 NIVLETLKV 187
N+++E++
Sbjct: 189 NLIIESIDA 197
>gi|222097275|ref|YP_002531332.1| ATP-dependent protease peptidase subunit [Bacillus cereus Q1]
gi|254802332|sp|B9IVB9|HSLV_BACCQ RecName: Full=ATP-dependent protease subunit HslV
gi|221241333|gb|ACM14043.1| ATP-dependent protease hslV [Bacillus cereus Q1]
Length = 180
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 99/177 (55%), Positives = 133/177 (75%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G VMK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA RAL +A++IA+ +++IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLNIAGDICVYTNHNIIVEEL 180
>gi|146278981|ref|YP_001169140.1| ATP-dependent protease peptidase subunit [Rhodobacter sphaeroides
ATCC 17025]
gi|189036234|sp|A4WWS1|HSLV_RHOS5 RecName: Full=ATP-dependent protease subunit HslV
gi|145557222|gb|ABP71835.1| 20S proteasome, A and B subunits [Rhodobacter sphaeroides ATCC
17025]
Length = 185
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 123/185 (66%), Positives = 145/185 (78%), Gaps = 3/185 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M + + H TTIL VR+ G VV+AGDGQVSLGQTV+K ARKVRRL G ++AGF
Sbjct: 1 MAEDRFP-GWHGTTILAVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHEVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLEKKLE QL R+ VELAKDWRMDKYLRNLEAM+++ D LVI
Sbjct: 60 AGSTADAFTLLERLEKKLEAASGQLARACVELAKDWRMDKYLRNLEAMLIVTDGETLLVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR LM+T AEE+ARKAM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNFALAAARGLMATDLPAEEVARKAMAIAADICVYTNGNLT 179
Query: 182 LETLK 186
+E +
Sbjct: 180 VERIS 184
>gi|300721289|ref|YP_003710560.1| peptidase component of the HslUV protease [Xenorhabdus nematophila
ATCC 19061]
gi|297627777|emb|CBJ88308.1| peptidase component of the HslUV protease [Xenorhabdus nematophila
ATCC 19061]
Length = 176
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 101/172 (58%), Positives = 131/172 (76%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGKVVIGGDGQATMGHTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGGSYA +AARA++ T A EI +A+SIAADIC+YTNHN E L
Sbjct: 122 AIGSGGSYAQAAARAMLETTDLGAREITERALSIAADICIYTNHNHNFEELS 173
>gi|237807245|ref|YP_002891685.1| ATP-dependent protease peptidase subunit [Tolumonas auensis DSM
9187]
gi|259491399|sp|C4L9X0|HSLV_TOLAT RecName: Full=ATP-dependent protease subunit HslV
gi|237499506|gb|ACQ92099.1| 20S proteasome A and B subunits [Tolumonas auensis DSM 9187]
Length = 180
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 102/172 (59%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQVSLG TVMK NARKV RL G ++AGFAG +ADAFTLLER
Sbjct: 2 TTIVSVRRNGQVVIGGDGQVSLGNTVMKGNARKVHRLYNGKVLAGFAGGTADAFTLLERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L R++V LAK+WR D+ LR LEA++ +AD + +ITG GDV++PEN ++
Sbjct: 62 EAKLQAHQGNLERAAVALAKEWRTDRALRRLEALLAVADAQRSFIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A SAARAL+ +T+ SAEEI +KA++IA DICV+TN +E L+
Sbjct: 122 AIGSGGAFAQSAARALLENTELSAEEIVKKALTIAGDICVFTNSFHTIEVLE 173
>gi|239826607|ref|YP_002949231.1| ATP-dependent protease peptidase subunit [Geobacillus sp. WCH70]
gi|259491389|sp|C5D8V8|HSLV_GEOSW RecName: Full=ATP-dependent protease subunit HslV
gi|239806900|gb|ACS23965.1| 20S proteasome A and B subunits [Geobacillus sp. WCH70]
Length = 180
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 97/178 (54%), Positives = 133/178 (74%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI + +G +AGDGQV+ G VMK A+KVRRL +G ++AGFAGS ADAFT
Sbjct: 3 QFHATTIFAIHHNGKAAMAGDGQVTFGNAVVMKHTAKKVRRLFQGKVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KLE++ L R++VELAK+WR DK LR LEAM+++ D+ L+++G G+V+EP
Sbjct: 63 LFEMFEGKLEEFNGNLPRAAVELAKEWRSDKVLRRLEAMLIVMDERHLLLVSGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YAL+A RAL Q SA+EIA+ A+ IAA+ICVYTN +I++E L
Sbjct: 123 DDGILAIGSGGNYALAAGRALKQYAGDQLSAKEIAKAALEIAANICVYTNDHIIVEEL 180
>gi|85859269|ref|YP_461471.1| ATP-dependent protease peptidase subunit [Syntrophus aciditrophicus
SB]
gi|85722360|gb|ABC77303.1| ATP-dependent endopeptidase hsl proteolytic subunit [Syntrophus
aciditrophicus SB]
Length = 212
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 99/185 (53%), Positives = 132/185 (71%), Gaps = 1/185 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+ KM TTI+ V+ G V +AGDGQV+L TVMK ARKVRRL +I GFAG++A
Sbjct: 13 ERKMQKMRGTTIVAVKHKGKVTVAGDGQVTLDVTVMKHGARKVRRLYHDEVIVGFAGTTA 72
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL +R + KLEQY LLR++VEL KDWR D+ LR+LEA+++ + L+I+G GD
Sbjct: 73 DAFTLFDRFDSKLEQYNGNLLRAAVELTKDWRTDRILRHLEALMIAVSRDHFLMISGNGD 132
Query: 127 VLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+E ++ VMAIGSGG YAL+AARA++ + A EIAR+A+ IA++IC+YTN NI +E L
Sbjct: 133 VIESDDDVMAIGSGGPYALAAARAMIRYSDLPATEIAREAVQIASEICIYTNDNITVEEL 192
Query: 186 KVGDE 190
E
Sbjct: 193 DTEQE 197
>gi|71279586|ref|YP_271018.1| ATP-dependent protease peptidase subunit [Colwellia psychrerythraea
34H]
gi|71145326|gb|AAZ25799.1| ATP-dependent protease HslVU, HslV subunit [Colwellia
psychrerythraea 34H]
Length = 172
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 100/171 (58%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G V I GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVAIGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLEQ+ L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ESKLEQHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVIQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T SA+EI K+++IA +ICV+TN ++ L
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAKEIVEKSLTIAGNICVFTNQEQTIDEL 172
>gi|205373365|ref|ZP_03226169.1| ATP-dependent protease peptidase subunit [Bacillus coahuilensis
m4-4]
Length = 180
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 94/178 (52%), Positives = 131/178 (73%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI V+ +G ++GDGQV+ G VMK ARKVR+L ++AGFAGS ADAFT
Sbjct: 3 QFHATTIFAVQHNGKSAMSGDGQVTFGNAVVMKHTARKVRKLFHDQVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E +LE+Y L R++VELAK+WR D+ LR LEAM+++ +K +++G G+V+EP
Sbjct: 63 LFEKFEARLEEYNGNLQRAAVELAKEWRTDQVLRKLEAMLIVMNKEHIYLVSGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YALSA RAL +A+EIA+ ++ +AADICVYTNH I+LE L
Sbjct: 123 DDGILAIGSGGNYALSAGRALKKYSGEHMTAKEIAKASLEVAADICVYTNHQIILEEL 180
>gi|82703660|ref|YP_413226.1| ATP-dependent protease peptidase subunit [Nitrosospira multiformis
ATCC 25196]
gi|82411725|gb|ABB75834.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Nitrosospira multiformis ATCC 25196]
Length = 196
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 105/179 (58%), Positives = 134/179 (74%), Gaps = 1/179 (0%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ H TTIL+ R+ V + GDGQV+LG V KA+ARKVRRL I+AGFAG +ADA
Sbjct: 18 DMAEYHGTTILSARRGNHVALGGDGQVTLGAVVAKASARKVRRLYHDRILAGFAGGTADA 77
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL ER E KLE++ L+RS+VELAKDWR D+ LR LEAM+++AD TL+ITG GDV+
Sbjct: 78 FTLFERFEGKLEKHQGHLMRSAVELAKDWRTDRILRRLEAMLVVADPAATLIITGAGDVI 137
Query: 129 EPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
EPE G+ AIGSGGSYA SAARAL+ +T + EI +KA++IA D+C+YTN N V+E L+
Sbjct: 138 EPEFGLAAIGSGGSYAHSAARALLENTDLTPPEIVKKALTIAGDLCIYTNQNHVIEVLE 196
>gi|88858830|ref|ZP_01133471.1| peptidase component of the HslUV protease [Pseudoalteromonas
tunicata D2]
gi|88819056|gb|EAR28870.1| peptidase component of the HslUV protease [Pseudoalteromonas
tunicata D2]
Length = 172
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 103/171 (60%), Positives = 136/171 (79%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+DG VVIAGDGQVSLG TVMK NA+KVRRL G ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRDGKVVIAGDGQVSLGNTVMKGNAKKVRRLYNGKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L +++VE+AKDWR D+ LR LEA++ +AD T + +ITG GDV++PEN ++
Sbjct: 62 ESKLEMHQGHLTKAAVEMAKDWRSDRALRKLEALLAVADHTASFIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T+ SA EIA K+++IA +ICV+TNH +E L
Sbjct: 122 AIGSGGAFAQSAATALLENTELSAREIAEKSLTIAGNICVFTNHFQTIEEL 172
>gi|296133055|ref|YP_003640302.1| 20S proteasome A and B subunits [Thermincola sp. JR]
gi|296031633|gb|ADG82401.1| 20S proteasome A and B subunits [Thermincola potens JR]
Length = 180
Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats.
Identities = 102/175 (58%), Positives = 132/175 (75%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ V+K G IAGDGQV+ G V+K ARKVRRL ++AGFAGS ADAFTL
Sbjct: 2 FKGTTIVAVKKGGQTAIAGDGQVTFGGNVVLKHQARKVRRLYNDKVLAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAK+WRMDK LR LEA++++AD L+I+G G+V+EP+
Sbjct: 62 FEKFEGKLEEYRGNLQRAAVELAKEWRMDKILRRLEALLIVADSKHLLIISGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGGSYAL+AARAL+ T+ A +IAR+A++IAA ICV+TN NIV+E L
Sbjct: 122 DDVAAIGSGGSYALAAARALIKFTELDAAKIAREALTIAASICVFTNDNIVVEEL 176
>gi|288553071|ref|YP_003425006.1| ATP-dependent protease peptidase subunit [Bacillus pseudofirmus
OF4]
gi|288544231|gb|ADC48114.1| ATP-dependent protease peptidase subunit [Bacillus pseudofirmus
OF4]
Length = 183
Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats.
Identities = 96/182 (52%), Positives = 134/182 (73%), Gaps = 3/182 (1%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSA 66
+ + HATTI V+ +G +AGDGQV+LG VMK A+KVRR+ +G ++AGFAGS A
Sbjct: 2 NEKMTFHATTIFAVQHNGRCAMAGDGQVTLGNAVVMKHTAKKVRRIYQGKVLAGFAGSVA 61
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL E+ E +LE++ L R++VELAK+WR DK LR LEAM+++ ++ L+I+G G+
Sbjct: 62 DAFTLFEKFESRLEEFNGNLKRAAVELAKEWRSDKVLRQLEAMLIVMNREHILLISGTGE 121
Query: 127 VLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLET 184
V+EP++G++AIGSGG+YALSA RAL SA+EIA A+ A +ICVYTN N+V+E
Sbjct: 122 VIEPDDGILAIGSGGNYALSAGRALKKHAPDLSAKEIATAALETAGEICVYTNLNLVVEE 181
Query: 185 LK 186
L+
Sbjct: 182 LQ 183
>gi|302392402|ref|YP_003828222.1| ATP dependent peptidase CodWX, CodW component [Acetohalobium
arabaticum DSM 5501]
gi|302204479|gb|ADL13157.1| ATP dependent peptidase CodWX, CodW component [Acetohalobium
arabaticum DSM 5501]
Length = 175
Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats.
Identities = 92/174 (52%), Positives = 130/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATT++ V++ V IAGDGQV++ TVMK A+KVRRL G ++AGFAGS+AD FTL
Sbjct: 2 FEATTVVAVKQGKKVAIAGDGQVTMKHTVMKHKAKKVRRLYNGEVLAGFAGSAADGFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E K+E++ L R++VELAK+WR DK LR LEA++++A+ LVI+G GDV+EP++
Sbjct: 62 EKFEAKIEEFQGNLQRAAVELAKEWRTDKMLRKLEALLIVANDEHLLVISGSGDVIEPDD 121
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG YAL+A RAL+ ++ +IA++A+ IA+DIC+YTN NI +E +
Sbjct: 122 DVTAIGSGGPYALAATRALLEYSELEPADIAKQALKIASDICIYTNDNITVEEI 175
>gi|30021918|ref|NP_833549.1| ATP-dependent protease peptidase subunit [Bacillus cereus ATCC
14579]
gi|30263834|ref|NP_846211.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
Ames]
gi|47529258|ref|YP_020607.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
'Ames Ancestor']
gi|49186680|ref|YP_029932.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
Sterne]
gi|49479415|ref|YP_037891.1| ATP-dependent protease peptidase subunit [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|52141659|ref|YP_085171.1| ATP-dependent protease peptidase subunit [Bacillus cereus E33L]
gi|65321157|ref|ZP_00394116.1| COG5405: ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Bacillus anthracis str. A2012]
gi|118479052|ref|YP_896203.1| ATP-dependent protease peptidase subunit [Bacillus thuringiensis
str. Al Hakam]
gi|165873315|ref|ZP_02217920.1| ATP-dependent protease hslV [Bacillus anthracis str. A0488]
gi|167642026|ref|ZP_02400256.1| ATP-dependent protease hslV [Bacillus anthracis str. A0193]
gi|170689660|ref|ZP_02880840.1| ATP-dependent protease hslV [Bacillus anthracis str. A0465]
gi|170709360|ref|ZP_02899774.1| ATP-dependent protease hslV [Bacillus anthracis str. A0389]
gi|177655994|ref|ZP_02937121.1| ATP-dependent protease hslV [Bacillus anthracis str. A0174]
gi|196047760|ref|ZP_03114953.1| ATP-dependent protease hslV [Bacillus cereus 03BB108]
gi|206972727|ref|ZP_03233663.1| ATP-dependent protease hslV [Bacillus cereus AH1134]
gi|218233809|ref|YP_002368631.1| ATP-dependent protease peptidase subunit [Bacillus cereus B4264]
gi|218904958|ref|YP_002452792.1| ATP-dependent protease hslV [Bacillus cereus AH820]
gi|225865811|ref|YP_002751189.1| ATP-dependent protease HslVU, peptidase subunit [Bacillus cereus
03BB102]
gi|227813262|ref|YP_002813271.1| ATP-dependent protease hslV [Bacillus anthracis str. CDC 684]
gi|228916467|ref|ZP_04080033.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228922584|ref|ZP_04085884.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228928878|ref|ZP_04091910.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935144|ref|ZP_04097971.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947549|ref|ZP_04109839.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228954106|ref|ZP_04116135.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960046|ref|ZP_04121710.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228986973|ref|ZP_04147099.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229047516|ref|ZP_04193106.1| ATP-dependent protease hslV [Bacillus cereus AH676]
gi|229071328|ref|ZP_04204551.1| ATP-dependent protease hslV [Bacillus cereus F65185]
gi|229081085|ref|ZP_04213595.1| ATP-dependent protease hslV [Bacillus cereus Rock4-2]
gi|229111301|ref|ZP_04240854.1| ATP-dependent protease hslV [Bacillus cereus Rock1-15]
gi|229123344|ref|ZP_04252548.1| ATP-dependent protease hslV [Bacillus cereus 95/8201]
gi|229129106|ref|ZP_04258079.1| ATP-dependent protease hslV [Bacillus cereus BDRD-Cer4]
gi|229146401|ref|ZP_04274772.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST24]
gi|229152029|ref|ZP_04280224.1| ATP-dependent protease hslV [Bacillus cereus m1550]
gi|229157406|ref|ZP_04285484.1| ATP-dependent protease hslV [Bacillus cereus ATCC 4342]
gi|229162766|ref|ZP_04290723.1| ATP-dependent protease hslV [Bacillus cereus R309803]
gi|229180106|ref|ZP_04307450.1| ATP-dependent protease hslV [Bacillus cereus 172560W]
gi|229186069|ref|ZP_04313239.1| ATP-dependent protease hslV [Bacillus cereus BGSC 6E1]
gi|229191999|ref|ZP_04318969.1| ATP-dependent protease hslV [Bacillus cereus ATCC 10876]
gi|229603703|ref|YP_002868068.1| ATP-dependent protease HslVU, peptidase subunit [Bacillus anthracis
str. A0248]
gi|254683463|ref|ZP_05147323.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
CNEVA-9066]
gi|254721984|ref|ZP_05183773.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
A1055]
gi|254735868|ref|ZP_05193574.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
Western North America USA6153]
gi|254739606|ref|ZP_05197300.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
Kruger B]
gi|254751199|ref|ZP_05203238.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
Vollum]
gi|301055320|ref|YP_003793531.1| ATP-dependent protease peptidase subunit [Bacillus anthracis CI]
gi|47605666|sp|Q819X6|HSLV_BACCR RecName: Full=ATP-dependent protease subunit HslV
gi|47605672|sp|Q81WK5|HSLV_BACAN RecName: Full=ATP-dependent protease subunit HslV
gi|77416826|sp|Q636J6|HSLV_BACCZ RecName: Full=ATP-dependent protease subunit HslV
gi|85542194|sp|Q6HEY5|HSLV_BACHK RecName: Full=ATP-dependent protease subunit HslV
gi|166221624|sp|A0RHK3|HSLV_BACAH RecName: Full=ATP-dependent protease subunit HslV
gi|226704533|sp|B7JJA8|HSLV_BACC0 RecName: Full=ATP-dependent protease subunit HslV
gi|226704535|sp|B7HDV3|HSLV_BACC4 RecName: Full=ATP-dependent protease subunit HslV
gi|254802329|sp|C3P5N2|HSLV_BACAA RecName: Full=ATP-dependent protease subunit HslV
gi|254802330|sp|C3L797|HSLV_BACAC RecName: Full=ATP-dependent protease subunit HslV
gi|254802331|sp|C1EP54|HSLV_BACC3 RecName: Full=ATP-dependent protease subunit HslV
gi|29897474|gb|AAP10750.1| ATP-dependent protease hslV [Bacillus cereus ATCC 14579]
gi|30258478|gb|AAP27697.1| ATP-dependent protease HslVU, peptidase subunit [Bacillus anthracis
str. Ames]
gi|47504406|gb|AAT33082.1| ATP-dependent protease hslV [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180607|gb|AAT55983.1| ATP-dependent protease hslV [Bacillus anthracis str. Sterne]
gi|49330971|gb|AAT61617.1| ATP-dependent protease hslV (heat shock protein HslV) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51975128|gb|AAU16678.1| ATP-dependent protease (heat shock protein) [Bacillus cereus E33L]
gi|118418277|gb|ABK86696.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Bacillus thuringiensis str. Al
Hakam]
gi|164710953|gb|EDR16525.1| ATP-dependent protease hslV [Bacillus anthracis str. A0488]
gi|167510006|gb|EDR85422.1| ATP-dependent protease hslV [Bacillus anthracis str. A0193]
gi|170125734|gb|EDS94647.1| ATP-dependent protease hslV [Bacillus anthracis str. A0389]
gi|170666384|gb|EDT17167.1| ATP-dependent protease hslV [Bacillus anthracis str. A0465]
gi|172079893|gb|EDT65001.1| ATP-dependent protease hslV [Bacillus anthracis str. A0174]
gi|196021408|gb|EDX60122.1| ATP-dependent protease hslV [Bacillus cereus 03BB108]
gi|206732349|gb|EDZ49535.1| ATP-dependent protease hslV [Bacillus cereus AH1134]
gi|218161766|gb|ACK61758.1| ATP-dependent protease hslV [Bacillus cereus B4264]
gi|218540110|gb|ACK92508.1| ATP-dependent protease hslV [Bacillus cereus AH820]
gi|225786526|gb|ACO26743.1| ATP-dependent protease HslVU, peptidase subunit [Bacillus cereus
03BB102]
gi|227005202|gb|ACP14945.1| ATP-dependent protease hslV [Bacillus anthracis str. CDC 684]
gi|228591550|gb|EEK49399.1| ATP-dependent protease hslV [Bacillus cereus ATCC 10876]
gi|228597488|gb|EEK55138.1| ATP-dependent protease hslV [Bacillus cereus BGSC 6E1]
gi|228603315|gb|EEK60792.1| ATP-dependent protease hslV [Bacillus cereus 172560W]
gi|228620648|gb|EEK77517.1| ATP-dependent protease hslV [Bacillus cereus R309803]
gi|228626133|gb|EEK82882.1| ATP-dependent protease hslV [Bacillus cereus ATCC 4342]
gi|228631378|gb|EEK88012.1| ATP-dependent protease hslV [Bacillus cereus m1550]
gi|228637034|gb|EEK93493.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST24]
gi|228654343|gb|EEL10208.1| ATP-dependent protease hslV [Bacillus cereus BDRD-Cer4]
gi|228660120|gb|EEL15756.1| ATP-dependent protease hslV [Bacillus cereus 95/8201]
gi|228672077|gb|EEL27368.1| ATP-dependent protease hslV [Bacillus cereus Rock1-15]
gi|228702129|gb|EEL54605.1| ATP-dependent protease hslV [Bacillus cereus Rock4-2]
gi|228711782|gb|EEL63734.1| ATP-dependent protease hslV [Bacillus cereus F65185]
gi|228723763|gb|EEL75118.1| ATP-dependent protease hslV [Bacillus cereus AH676]
gi|228772751|gb|EEM21191.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228799562|gb|EEM46515.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228805672|gb|EEM52262.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228812069|gb|EEM58400.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824509|gb|EEM70314.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830685|gb|EEM76290.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228837013|gb|EEM82354.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228843046|gb|EEM88128.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229268111|gb|ACQ49748.1| ATP-dependent protease HslVU, peptidase subunit [Bacillus anthracis
str. A0248]
gi|300377489|gb|ADK06393.1| ATP-dependent protease peptidase subunit [Bacillus cereus biovar
anthracis str. CI]
Length = 180
Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats.
Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G VMK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA RAL +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 180
>gi|307824295|ref|ZP_07654521.1| 20S proteasome A and B subunits [Methylobacter tundripaludum SV96]
gi|307734675|gb|EFO05526.1| 20S proteasome A and B subunits [Methylobacter tundripaludum SV96]
Length = 182
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 103/179 (57%), Positives = 135/179 (75%), Gaps = 1/179 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TTIL+VR+ VVI GDGQV+LG TVMK NARKVRRL +IAGFAG++ADAFT
Sbjct: 1 MSFRGTTILSVRRGDKVVIGGDGQVTLGNTVMKGNARKVRRLYHDKVIAGFAGATADAFT 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KLE++ L R++VE+AKDWR D+ LR LEA++ IAD +L+I+G GDV+EP
Sbjct: 61 LFEHFEGKLEKHRGNLTRAAVEMAKDWRTDRALRKLEALLTIADARTSLIISGTGDVIEP 120
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
E +MAIGSGG++A +AARAL+ +T SA EI ++++IAADIC+YTNHN+ +E L
Sbjct: 121 EFDLMAIGSGGAFAQAAARALLENTNLSAREIVERSLNIAADICIYTNHNLRIEELDAE 179
>gi|170749485|ref|YP_001755745.1| ATP-dependent protease peptidase subunit [Methylobacterium
radiotolerans JCM 2831]
gi|170656007|gb|ACB25062.1| 20S proteasome A and B subunits [Methylobacterium radiotolerans JCM
2831]
Length = 191
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 123/182 (67%), Positives = 148/182 (81%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D+ +MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++
Sbjct: 10 DRGAVPQMHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGAVIGGFAGAT 69
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTL ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+AD+ ++L+++G G
Sbjct: 70 ADAFTLFERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADREVSLLLSGSG 129
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE+GVMAIGSGG+YAL+AARAL AE I R+AM+IAA+ICVYTN N+V+E L
Sbjct: 130 DVLEPESGVMAIGSGGNYALAAARALEEGDLDAEAIVRRAMAIAAEICVYTNGNLVIEAL 189
Query: 186 KV 187
Sbjct: 190 DA 191
>gi|319649573|ref|ZP_08003729.1| ATP-dependent protease peptidase subunit [Bacillus sp. 2_A_57_CT2]
gi|317398735|gb|EFV79417.1| ATP-dependent protease peptidase subunit [Bacillus sp. 2_A_57_CT2]
Length = 180
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 96/178 (53%), Positives = 130/178 (73%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI V +G ++GDGQV+ G VMK ARKVR+L G ++AGFAGS ADAFT
Sbjct: 3 EFHATTIFAVHHNGECAMSGDGQVTFGNAVVMKHTARKVRKLFNGKVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KLE+Y L R++VELAK+WR DK LR LEAM+++ + L+I+G G+V+EP
Sbjct: 63 LFEMFEGKLEEYNGNLERAAVELAKEWRSDKVLRKLEAMLIVMNTDSLLLISGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YAL+A R+L SA EIA+ ++ +AA+ICVYTNHNI++E L
Sbjct: 123 DDGILAIGSGGNYALAAGRSLKRFAGEHLSAREIAKASLEMAAEICVYTNHNIIVEEL 180
>gi|261819536|ref|YP_003257642.1| ATP-dependent protease peptidase subunit [Pectobacterium wasabiae
WPP163]
gi|261603549|gb|ACX86035.1| 20S proteasome A and B subunits [Pectobacterium wasabiae WPP163]
Length = 176
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 97/171 (56%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYHDRVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++
Sbjct: 62 ERKLELHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A +I K++ IA DIC+YTN +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGALDIVEKSLGIAGDICIYTNQFHTIEEL 172
>gi|73667417|ref|YP_303433.1| ATP-dependent protease peptidase subunit [Ehrlichia canis str.
Jake]
gi|123614688|sp|Q3YR20|HSLV_EHRCJ RecName: Full=ATP-dependent protease subunit HslV
gi|72394558|gb|AAZ68835.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Ehrlichia canis str. Jake]
Length = 189
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 109/187 (58%), Positives = 146/187 (78%), Gaps = 6/187 (3%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
+ +M+ TTIL +R+ V+IAGDGQVSLGQTV+K +A+K++RL +I GFAG++
Sbjct: 2 EHKDPSQMYGTTILCIRRGNQVIIAGDGQVSLGQTVIKNSAKKIKRLANDTVITGFAGAT 61
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTL ERLE KLE++P QLLR+ VELAKDWRMDKYLR LEAM+++ADK+I+L+I+G G
Sbjct: 62 ADAFTLFERLESKLEKHPGQLLRACVELAKDWRMDKYLRRLEAMMIVADKSISLIISGNG 121
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMST------QNSAEEIARKAMSIAADICVYTNHN 179
DVLEPENG+ AIGSGG+YAL+AA+AL T + E AM IA++IC+YTN+N
Sbjct: 122 DVLEPENGIAAIGSGGNYALAAAKALCETNERFSQNMTLEYTITTAMRIASEICIYTNNN 181
Query: 180 IVLETLK 186
I++E ++
Sbjct: 182 IIIEKIE 188
>gi|300309524|ref|YP_003773616.1| ATP-dependent protease HslVU peptidase subunit [Herbaspirillum
seropedicae SmR1]
gi|300072309|gb|ADJ61708.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit heat shock
protein [Herbaspirillum seropedicae SmR1]
Length = 178
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 105/176 (59%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG VMK +ARKVR+L G ++ GFAG +ADAFTL
Sbjct: 3 QFHGTTILSVRRGNQVALGGDGQVTLGNIVMKGSARKVRKLYHGKVLVGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LE E KLE++ L+R+SVELAKDWR D+ LR LEAM+L ADK TLVITG GDVLEP
Sbjct: 63 LELFEAKLEKHQGNLMRASVELAKDWRTDRMLRRLEAMLLCADKETTLVITGNGDVLEPN 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G+ AIGSGGSYA SAA+AL +T+ S EI +K+++IA ++C+YTN N ++ETL+
Sbjct: 123 DGIGAIGSGGSYAQSAAKALYENTELSPAEIVKKSLTIAGELCIYTNLNHIIETLE 178
>gi|217425069|ref|ZP_03456565.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
pseudomallei 576]
gi|226199822|ref|ZP_03795373.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei Pakistan 9]
gi|237810381|ref|YP_002894832.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei MSHR346]
gi|238563256|ref|ZP_00439196.2| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
mallei GB8 horse 4]
gi|254174901|ref|ZP_04881562.1| protease HslVU, subunit HslV [Burkholderia mallei ATCC 10399]
gi|254182214|ref|ZP_04888811.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei 1655]
gi|254188140|ref|ZP_04894652.1| protease HslVU, subunit HslV [Burkholderia pseudomallei Pasteur
52237]
gi|254201828|ref|ZP_04908192.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia mallei FMH]
gi|254207157|ref|ZP_04913508.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia mallei JHU]
gi|147747722|gb|EDK54798.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia mallei FMH]
gi|147752699|gb|EDK59765.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia mallei JHU]
gi|157935820|gb|EDO91490.1| protease HslVU, subunit HslV [Burkholderia pseudomallei Pasteur
52237]
gi|160695946|gb|EDP85916.1| protease HslVU, subunit HslV [Burkholderia mallei ATCC 10399]
gi|184212752|gb|EDU09795.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei 1655]
gi|217392089|gb|EEC32115.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
pseudomallei 576]
gi|225928173|gb|EEH24209.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei Pakistan 9]
gi|237503704|gb|ACQ96022.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei MSHR346]
gi|238521089|gb|EEP84543.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
mallei GB8 horse 4]
Length = 211
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 103/176 (58%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 36 QFHGTTILSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 95
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 96 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRLLRRLEAMLIAADATTTLVITGNGDVLDPE 155
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T S EI KA+ IA D+C+YTNHN ++ET++
Sbjct: 156 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKALGIAGDMCIYTNHNRIIETIE 211
>gi|126732957|ref|ZP_01748718.1| 20S proteasome, A and B subunits [Sagittula stellata E-37]
gi|126706574|gb|EBA05650.1| 20S proteasome, A and B subunits [Sagittula stellata E-37]
Length = 183
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 122/177 (68%), Positives = 144/177 (81%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADA 68
H TTI+ VRKDG VV+AGDGQVSLGQTV+K ARKVRRL G +++AGFAGS+ADA
Sbjct: 6 PGWHGTTIIGVRKDGKVVVAGDGQVSLGQTVIKGTARKVRRLSPGGKDVVAGFAGSTADA 65
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTLLERLEKKLE+ P QL R+SV+LAKDWR DKYL LEAM+++ D T VITG GDVL
Sbjct: 66 FTLLERLEKKLEETPGQLQRASVDLAKDWRTDKYLSKLEAMLIVTDGTDLFVITGAGDVL 125
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPE+ V AIGSGG+YAL+AARA+M T AE +AR+AM+IAADICVYTN N+ +ETL
Sbjct: 126 EPEHDVAAIGSGGNYALAAARAMMDTDKDAETVAREAMAIAADICVYTNGNLTVETL 182
>gi|221065127|ref|ZP_03541232.1| 20S proteasome A and B subunits [Comamonas testosteroni KF-1]
gi|264680257|ref|YP_003280167.1| 20S proteasome, A and B subunits [Comamonas testosteroni CNB-2]
gi|299533129|ref|ZP_07046514.1| ATP-dependent protease peptidase subunit [Comamonas testosteroni
S44]
gi|220710150|gb|EED65518.1| 20S proteasome A and B subunits [Comamonas testosteroni KF-1]
gi|262210773|gb|ACY34871.1| 20S proteasome, A and B subunits [Comamonas testosteroni CNB-2]
gi|298718906|gb|EFI59878.1| ATP-dependent protease peptidase subunit [Comamonas testosteroni
S44]
Length = 181
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 100/179 (55%), Positives = 137/179 (76%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTIL+VR+ V I GDGQV+LG V+K ARKVR+L G ++AGFAG++AD
Sbjct: 3 QFHGTTILSVRRQTPEGVQVAIGGDGQVTLGNIVIKGTARKVRKLYHGKVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ L R+++EL K+WR D+ LR LEAM+ +AD T +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGNLTRAAIELTKEWRTDRVLRKLEAMLAVADATTSLIITGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE G++AIGSGG+YA SAA+AL+ +T+ SAE++ RK+++IA ++C+YTN N +ETL
Sbjct: 123 LEPEQGIVAIGSGGAYAHSAAKALLNNTELSAEDVVRKSLAIAGELCIYTNMNHTIETL 181
>gi|89098651|ref|ZP_01171533.1| ATP-dependent protease peptidase subunit [Bacillus sp. NRRL
B-14911]
gi|89086613|gb|EAR65732.1| ATP-dependent protease peptidase subunit [Bacillus sp. NRRL
B-14911]
Length = 180
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 96/178 (53%), Positives = 133/178 (74%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI V+ +G +AGDGQV+ G VMK ARKVR+L G +IAGFAGS ADAFT
Sbjct: 3 QFHATTIFAVQHNGKCAMAGDGQVTFGNAVVMKHTARKVRKLFNGKVIAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E +LE+Y L R++VELAK+WR DK LR LEAM+++ +++ L+I+G G+V+EP
Sbjct: 63 LFELFESRLEEYNGNLQRAAVELAKEWRSDKVLRKLEAMLIVMNESDLLLISGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YAL+A R+L +A+EIAR ++ +AA+ICVYTN NI++E L
Sbjct: 123 DDGILAIGSGGNYALAAGRSLKKYAGEHLTAKEIARSSLEVAAEICVYTNENIIVEEL 180
>gi|149187078|ref|ZP_01865384.1| ATP-dependent protease peptidase subunit [Erythrobacter sp. SD-21]
gi|148829289|gb|EDL47734.1| ATP-dependent protease peptidase subunit [Erythrobacter sp. SD-21]
Length = 186
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 118/186 (63%), Positives = 148/186 (79%), Gaps = 1/186 (0%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIA 59
M ++H V+ H TTI+ VRK +V+AGDGQVS+G TVMK NARKVRR+G G ++A
Sbjct: 1 MSDQDNRHGLVQWHGTTIIGVRKGDRIVVAGDGQVSMGNTVMKPNARKVRRIGEGGKVVA 60
Query: 60 GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
GFAG++ADAFTL ERLEKKLEQY QLLR++VEL KDWR DKYLRNLEA++++ADK L
Sbjct: 61 GFAGATADAFTLFERLEKKLEQYNGQLLRAAVELTKDWRTDKYLRNLEALMIVADKENLL 120
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHN 179
V+TG GDVLEPE G+ AIGSGG+YAL+AA+A+ ++ E IARKAM +AADICV+TN N
Sbjct: 121 VLTGNGDVLEPEGGITAIGSGGNYALAAAKAIAEYEDDPETIARKAMKVAADICVFTNGN 180
Query: 180 IVLETL 185
+ LE +
Sbjct: 181 VTLEEV 186
>gi|254464707|ref|ZP_05078118.1| ATP-dependent protease HslV [Rhodobacterales bacterium Y4I]
gi|206685615|gb|EDZ46097.1| ATP-dependent protease HslV [Rhodobacterales bacterium Y4I]
Length = 185
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 121/184 (65%), Positives = 144/184 (78%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D + H TTI+ V+K+G VVIAGDGQVSLGQTV+K ARKVRRL G +++AGF
Sbjct: 1 MADDKFP-GWHGTTIIGVKKNGQVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D VI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGKDMFVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG+YAL+AAR LM + SAE +AR AM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNYALAAARGLMDSDRSAETVARDAMAIAADICVYTNGNLT 179
Query: 182 LETL 185
+ET+
Sbjct: 180 VETI 183
>gi|229019025|ref|ZP_04175866.1| ATP-dependent protease hslV [Bacillus cereus AH1273]
gi|229025271|ref|ZP_04181691.1| ATP-dependent protease hslV [Bacillus cereus AH1272]
gi|228736024|gb|EEL86599.1| ATP-dependent protease hslV [Bacillus cereus AH1272]
gi|228742265|gb|EEL92424.1| ATP-dependent protease hslV [Bacillus cereus AH1273]
Length = 180
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 100/177 (56%), Positives = 132/177 (74%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G VMK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA RAL +A+EIA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQYASEHLTAKEIAKASLDIAGDICVYTNHNIIVEEL 180
>gi|219669730|ref|YP_002460165.1| ATP-dependent protease peptidase subunit [Desulfitobacterium
hafniense DCB-2]
gi|254802410|sp|B8FRG9|HSLV_DESHD RecName: Full=ATP-dependent protease subunit HslV
gi|219539990|gb|ACL21729.1| 20S proteasome A and B subunits [Desulfitobacterium hafniense
DCB-2]
Length = 176
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 103/175 (58%), Positives = 137/175 (78%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V +AGDGQV++GQ TVMK ARKVRRL G ++AGFAGS ADAFTL
Sbjct: 2 FHATTIVAVKKGDQVAMAGDGQVTMGQATVMKHKARKVRRLFHGKVLAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAKDWRMDK LRNLEA++++ADK L+I+G G+V+EP+
Sbjct: 62 FEKFENKLEEYQGNLQRAAVELAKDWRMDKALRNLEALLIVADKQSMLLISGSGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YAL+AARAL+ +T ++ ++AM +A+ ICVYTN I++E L
Sbjct: 122 DGIAAIGSGGNYALAAARALVKNTDLQPAQLVQEAMEVASSICVYTNDQIIVEEL 176
>gi|330827799|ref|YP_004390751.1| ATP-dependent protease subunit HslV [Aeromonas veronii B565]
gi|328802935|gb|AEB48134.1| ATP-dependent protease subunit HslV [Aeromonas veronii B565]
Length = 177
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 98/172 (56%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQVSLG TVMK NARKV RL G ++AGFAG +ADAFTLLER
Sbjct: 2 TTIVSVRRNGQVVIGGDGQVSLGNTVMKGNARKVHRLYNGKVLAGFAGGTADAFTLLERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L R++V LAKDWR D+ LR LEA++ +AD+ + +ITG GDV++PE+ ++
Sbjct: 62 EAKLQAHQGNLERAAVALAKDWRTDRALRRLEALLAVADEHKSFIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A SAA AL+ +T+ A I K++ IA DICV+TN N +E L
Sbjct: 122 AIGSGGNFAQSAAIALLENTELDARTIVEKSLKIAGDICVFTNGNHTIEVLD 173
>gi|254511675|ref|ZP_05123742.1| ATP-dependent protease HslV [Rhodobacteraceae bacterium KLH11]
gi|221535386|gb|EEE38374.1| ATP-dependent protease HslV [Rhodobacteraceae bacterium KLH11]
Length = 183
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 120/184 (65%), Positives = 144/184 (78%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D + H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G ++AGF
Sbjct: 1 MADSDFP-GWHGTTIIGVKKGGQVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFEVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D LVI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGKDLLVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AARALM + AE++AR+AM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHNVAAIGSGGNFALAAARALMDSDKPAEQVAREAMAIAADICVYTNGNLT 179
Query: 182 LETL 185
+E +
Sbjct: 180 VEAI 183
>gi|237749449|ref|ZP_04579929.1| ATP-dependent protease peptidase subunit [Oxalobacter formigenes
OXCC13]
gi|229380811|gb|EEO30902.1| ATP-dependent protease peptidase subunit [Oxalobacter formigenes
OXCC13]
Length = 178
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 106/176 (60%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG V+K ARKVR+L G ++AGFAG +ADAFTL
Sbjct: 3 QFHGTTIVSVRRGSTVALGGDGQVTLGNIVIKGTARKVRKLYNGRVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ER E KLE++ LLRSSVELAKDWR D+ LR LEAM+L+AD+ TLVITG GDVLEPE
Sbjct: 63 IERFEAKLEKHQGNLLRSSVELAKDWRTDRMLRRLEAMLLVADRESTLVITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
GV AIGSGG+YA SAA AL +T EI KA+ IA D+C+YTN ++ETL
Sbjct: 123 EGVGAIGSGGAYAQSAALALVRNTDLPPAEIISKALGIAGDLCIYTNQAHIIETLD 178
>gi|329848322|ref|ZP_08263350.1| ATP-dependent protease hslV [Asticcacaulis biprosthecum C19]
gi|328843385|gb|EGF92954.1| ATP-dependent protease hslV [Asticcacaulis biprosthecum C19]
Length = 184
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 116/183 (63%), Positives = 142/183 (77%), Gaps = 1/183 (0%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ ++ H TTI+ VR++G VIAGDGQVS+G T++K ARKVR L G +I GFAG
Sbjct: 3 HSESNFP-NWHGTTIVAVRQNGKTVIAGDGQVSMGATIVKGGARKVRALAGGKVITGFAG 61
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTLLERLE KLE +P+QL R+ V+LAKDWR D+YLR LEAM+L+AD+ L +TG
Sbjct: 62 ATADAFTLLERLEAKLELFPDQLARACVDLAKDWRTDRYLRRLEAMLLVADRNHILTLTG 121
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
+GDVLEPE+GV AIGSGG YALSAARALM + AE IARKAM IAA ICVYTN ++ LE
Sbjct: 122 VGDVLEPEDGVAAIGSGGVYALSAARALMEYEPDAEVIARKAMKIAASICVYTNDHLTLE 181
Query: 184 TLK 186
TL
Sbjct: 182 TLS 184
>gi|146305570|ref|YP_001186035.1| ATP-dependent protease peptidase subunit [Pseudomonas mendocina
ymp]
gi|330501485|ref|YP_004378354.1| ATP-dependent protease peptidase subunit [Pseudomonas mendocina
NK-01]
gi|166222990|sp|A4XPN7|HSLV_PSEMY RecName: Full=ATP-dependent protease subunit HslV
gi|145573771|gb|ABP83303.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Pseudomonas mendocina ymp]
gi|328915771|gb|AEB56602.1| ATP-dependent protease peptidase subunit [Pseudomonas mendocina
NK-01]
Length = 176
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 103/175 (58%), Positives = 138/175 (78%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE G++
Sbjct: 62 EGQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEEGLI 121
Query: 136 AIGSGGSYALSAARA-LMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+GSGG++A +AARA LM T SA E+A+ A+ IA DICV+TNH+ +E L +
Sbjct: 122 AMGSGGNFAQAAARALLMKTDLSALEVAQTALGIAGDICVFTNHHQTIEELDAAE 176
>gi|74318559|ref|YP_316299.1| ATP-dependent protease peptidase subunit [Thiobacillus
denitrificans ATCC 25259]
gi|123611232|sp|Q3SFW2|HSLV_THIDA RecName: Full=ATP-dependent protease subunit HslV
gi|74058054|gb|AAZ98494.1| putative heat shock protein [Thiobacillus denitrificans ATCC 25259]
Length = 188
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 99/175 (56%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTIL+VR+ V + GDGQV+LG V+K+ ARK+RRL + ++AGFAG +ADAFTL
Sbjct: 3 QYRGTTILSVRRGAEVALGGDGQVTLGNIVIKSTARKIRRLYQEKVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+++ LLRS+VELAKDWR D+ LR LEAM+ +AD+ +L+ITG GDVLEPE
Sbjct: 63 FERFEAKLDKHSGHLLRSAVELAKDWRTDRMLRRLEAMLAVADREHSLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ AIGSGG++A SAARAL+ +T + EI +K+++IA DIC+Y+N N V+E L
Sbjct: 123 LGIAAIGSGGAFAQSAARALLENTDLAPLEIVKKSLTIAGDICIYSNQNHVIEVL 177
>gi|332995305|gb|AEF05360.1| ATP-dependent protease subunit HslV [Alteromonas sp. SN2]
Length = 174
Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats.
Identities = 99/172 (57%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VV+AGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGNQVVMAGDGQVSLGNTVMKGNARKVRRLYHDKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L +++VELAKDWR D+ LR LEA++ +AD+T + +ITG GDV++PEN ++
Sbjct: 62 EAKLEAHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASFIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG+YA ++A AL+ +T+ +A+EIA K+++IA DICV+TNH+ ++ L
Sbjct: 122 AIGSGGNYAQASAIALLENTELTAKEIAEKSLTIAGDICVFTNHSQTVDVLD 173
>gi|258620454|ref|ZP_05715492.1| ATP-dependent protease HslV [Vibrio mimicus VM573]
gi|258625667|ref|ZP_05720546.1| ATP-dependent protease HslV [Vibrio mimicus VM603]
gi|258581905|gb|EEW06775.1| ATP-dependent protease HslV [Vibrio mimicus VM603]
gi|258587333|gb|EEW12044.1| ATP-dependent protease HslV [Vibrio mimicus VM573]
Length = 177
Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats.
Identities = 99/169 (58%), Positives = 130/169 (76%), Gaps = 1/169 (0%)
Query: 22 RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
R++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER E KL+
Sbjct: 2 RRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQM 61
Query: 82 YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
+ L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE+ ++AIGSGG
Sbjct: 62 HQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLIAIGSGG 121
Query: 142 SYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
+YA +AA AL+ +T A IA KA++IA DICV+TNHN +E L++
Sbjct: 122 NYAQAAAIALLENTDLDARTIAEKALNIAGDICVFTNHNHTIEELEIPQ 170
>gi|163941568|ref|YP_001646452.1| ATP-dependent protease peptidase subunit [Bacillus
weihenstephanensis KBAB4]
gi|229013013|ref|ZP_04170178.1| ATP-dependent protease hslV [Bacillus mycoides DSM 2048]
gi|229061433|ref|ZP_04198778.1| ATP-dependent protease hslV [Bacillus cereus AH603]
gi|229134637|ref|ZP_04263447.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST196]
gi|229168569|ref|ZP_04296292.1| ATP-dependent protease hslV [Bacillus cereus AH621]
gi|229486308|sp|A9VT68|HSLV_BACWK RecName: Full=ATP-dependent protease subunit HslV
gi|163863765|gb|ABY44824.1| 20S proteasome A and B subunits [Bacillus weihenstephanensis KBAB4]
gi|228614975|gb|EEK72077.1| ATP-dependent protease hslV [Bacillus cereus AH621]
gi|228648898|gb|EEL04923.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST196]
gi|228717856|gb|EEL69504.1| ATP-dependent protease hslV [Bacillus cereus AH603]
gi|228748267|gb|EEL98127.1| ATP-dependent protease hslV [Bacillus mycoides DSM 2048]
Length = 180
Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 98/177 (55%), Positives = 131/177 (74%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G VMK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG YAL+A RAL +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGHYALAAGRALKQHASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 180
>gi|294500945|ref|YP_003564645.1| ATP-dependent protease HslV [Bacillus megaterium QM B1551]
gi|295706291|ref|YP_003599366.1| ATP-dependent protease HslV [Bacillus megaterium DSM 319]
gi|294350882|gb|ADE71211.1| ATP-dependent protease HslV [Bacillus megaterium QM B1551]
gi|294803950|gb|ADF41016.1| ATP-dependent protease HslV [Bacillus megaterium DSM 319]
Length = 180
Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 96/177 (54%), Positives = 131/177 (74%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ +G ++GDGQV+ G VMK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHNGQCAMSGDGQVTFGNAVVMKHTARKVRRLFQGQVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VELAK WR DK LR LEAM+++ +K L+++G G+V+EP+
Sbjct: 64 FELFETKLEEYNGNLQRAAVELAKQWRSDKVLRKLEAMLIVMNKDNLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA RAL +A+EIA+ A+ +A++ICVYTN +I++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQHAGEHLTAKEIAKAALDVASEICVYTNDHIIVEEL 180
>gi|258514511|ref|YP_003190733.1| ATP-dependent protease peptidase subunit [Desulfotomaculum
acetoxidans DSM 771]
gi|257778216|gb|ACV62110.1| 20S proteasome A and B subunits [Desulfotomaculum acetoxidans DSM
771]
Length = 176
Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 104/175 (59%), Positives = 137/175 (78%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+KDG IAGDGQV+ G TV+K ARK+RRL I+AGFAGS ADAFTL
Sbjct: 2 FHATTIVAVQKDGKTAIAGDGQVTFGDRTVIKHKARKIRRLYNHKILAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAK+WRMDK LR LEA++++ADK LV++G G+V+EP+
Sbjct: 62 FEKFEAKLEEYNGNLQRAAVELAKEWRMDKILRRLEALLIVADKETMLVLSGGGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+GV+A+GSGG YAL+AAR L TQ +EI R+A+++AADICVYTN+NI++E +
Sbjct: 122 DGVIAVGSGGPYALAAARVLAKHTQLEPKEIVREALAVAADICVYTNNNIIVEEI 176
>gi|117618959|ref|YP_858538.1| ATP-dependent protease peptidase subunit [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|166221620|sp|A0KQI7|HSLV_AERHH RecName: Full=ATP-dependent protease subunit HslV
gi|117560366|gb|ABK37314.1| ATP-dependent protease HslV [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 177
Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 98/172 (56%), Positives = 131/172 (76%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQVSLG TVMK NARKV RL G ++AGFAG +ADAFTLLER
Sbjct: 2 TTIVSVRRNGQVVIGGDGQVSLGNTVMKGNARKVHRLYNGKVLAGFAGGTADAFTLLERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L R++V LAKDWR D+ LR LEA++ +AD+ + +ITG GDV++PE+ ++
Sbjct: 62 EAKLQAHQGNLERAAVALAKDWRTDRALRRLEALLAVADEHKSFIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A SAA AL+ +T+ A+ I K++ IA DICV+TN N +E L
Sbjct: 122 AIGSGGNFAQSAAIALLENTELDAKSIVEKSLKIAGDICVFTNGNHTIEVLD 173
>gi|42782922|ref|NP_980169.1| ATP-dependent protease peptidase subunit [Bacillus cereus ATCC
10987]
gi|47570331|ref|ZP_00240976.1| heat shock protein HslV [Bacillus cereus G9241]
gi|206978535|ref|ZP_03239385.1| ATP-dependent protease hslV [Bacillus cereus H3081.97]
gi|217961250|ref|YP_002339818.1| ATP-dependent protease peptidase subunit [Bacillus cereus AH187]
gi|229031460|ref|ZP_04187460.1| ATP-dependent protease hslV [Bacillus cereus AH1271]
gi|229140472|ref|ZP_04269027.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST26]
gi|229174496|ref|ZP_04302028.1| ATP-dependent protease hslV [Bacillus cereus MM3]
gi|229197940|ref|ZP_04324655.1| ATP-dependent protease hslV [Bacillus cereus m1293]
gi|47605595|sp|P61476|HSLV_BACC1 RecName: Full=ATP-dependent protease subunit HslV
gi|226704536|sp|B7HLG3|HSLV_BACC7 RecName: Full=ATP-dependent protease subunit HslV
gi|42738849|gb|AAS42777.1| ATP-dependent protease hslV [Bacillus cereus ATCC 10987]
gi|47552996|gb|EAL11402.1| heat shock protein HslV [Bacillus cereus G9241]
gi|206743258|gb|EDZ54715.1| ATP-dependent protease hslV [Bacillus cereus H3081.97]
gi|217063650|gb|ACJ77900.1| ATP-dependent protease hslV [Bacillus cereus AH187]
gi|228585519|gb|EEK43622.1| ATP-dependent protease hslV [Bacillus cereus m1293]
gi|228609056|gb|EEK66346.1| ATP-dependent protease hslV [Bacillus cereus MM3]
gi|228643033|gb|EEK99309.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST26]
gi|228729749|gb|EEL80729.1| ATP-dependent protease hslV [Bacillus cereus AH1271]
gi|324327727|gb|ADY22987.1| ATP-dependent protease subunit HslV [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 180
Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G VMK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA RAL +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLDIAGDICVYTNHNIIVEEL 180
>gi|294139045|ref|YP_003555023.1| ATP-dependent protease HslV [Shewanella violacea DSS12]
gi|293325514|dbj|BAJ00245.1| ATP-dependent protease HslV [Shewanella violacea DSS12]
Length = 174
Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 99/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L++++VE+AKDWR DK LR LEA++ +AD +L+ITG GDV++PE ++
Sbjct: 62 EAKLEMHQGHLMKAAVEMAKDWRSDKMLRKLEALLAVADSECSLIITGNGDVIQPEGDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG +A SAA AL+ +T+ +A EIA K+++IA ICV+TN +E L
Sbjct: 122 AIGSGGPFAQSAATALLENTELTATEIAEKSLTIAGGICVFTNQFKTIEEL 172
>gi|76577992|gb|ABA47467.1| ATP-dependent protease hslV [Burkholderia pseudomallei 1710b]
gi|121229859|gb|ABM52377.1| protease HslVU, subunit HslV [Burkholderia mallei SAVP1]
gi|124292619|gb|ABN01888.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
mallei NCTC 10229]
gi|126244154|gb|ABO07247.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
mallei NCTC 10247]
Length = 214
Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 103/176 (58%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 39 QFHGTTILSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 98
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 99 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRLLRRLEAMLIAADATTTLVITGNGDVLDPE 158
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T S EI KA+ IA D+C+YTNHN ++ET++
Sbjct: 159 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKALGIAGDMCIYTNHNRIIETIE 214
>gi|134284129|ref|ZP_01770823.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei 305]
gi|134244581|gb|EBA44685.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei 305]
Length = 211
Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats.
Identities = 103/176 (58%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 36 QFHGTTILSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 95
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 96 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRLLRRLEAMLIAADATTTLVITGNGDVLDPE 155
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T S EI KA+ IA D+C+YTNHN ++ET++
Sbjct: 156 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKALGIAGDMCIYTNHNRIIETIE 211
>gi|170728750|ref|YP_001762776.1| ATP-dependent protease peptidase subunit [Shewanella woodyi ATCC
51908]
gi|238065941|sp|B1KK50|HSLV_SHEWM RecName: Full=ATP-dependent protease subunit HslV
gi|169814097|gb|ACA88681.1| 20S proteasome A and B subunits [Shewanella woodyi ATCC 51908]
Length = 174
Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L++++VE+AKDWR DK LR LEA++ +AD T +L+ITG GDV++PEN ++
Sbjct: 62 EAKLEMHQGHLMKAAVEMAKDWRSDKMLRKLEALLAVADDTCSLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ +T+ +A EIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNFAQSAATALLENTELTALEIAEKSLTIAGDICVFTNQFKTIEEL 172
>gi|260772032|ref|ZP_05880949.1| ATP-dependent protease HslV [Vibrio metschnikovii CIP 69.14]
gi|260612899|gb|EEX38101.1| ATP-dependent protease HslV [Vibrio metschnikovii CIP 69.14]
Length = 184
Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats.
Identities = 103/174 (59%), Positives = 138/174 (79%), Gaps = 1/174 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+D VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRDNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETTSLIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG+YA +AA AL+ +TQ A EIA KA++IA +ICV+TNH+ +E L++
Sbjct: 122 AIGSGGNYAQAAALALLENTQLDAREIAEKALNIAGNICVFTNHHHTIEELEIP 175
>gi|118590479|ref|ZP_01547881.1| ATP-dependent protease peptidase subunit [Stappia aggregata IAM
12614]
gi|118436942|gb|EAV43581.1| ATP-dependent protease peptidase subunit [Stappia aggregata IAM
12614]
Length = 186
Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats.
Identities = 123/186 (66%), Positives = 148/186 (79%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + + H TTI+ VRK G VVIAGDGQVSLGQTV+K ARKVR L KG +IAGFAG
Sbjct: 1 MSETREPAQWHGTTIMMVRKGGKVVIAGDGQVSLGQTVIKHTARKVRLLAKGEVIAGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTL ERLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+ADK ++LV+TG
Sbjct: 61 ATADAFTLFERLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKNVSLVLTG 120
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE GVM IGSGG+YAL+A RAL T AE IARKAM++AA+ICVYTN ++ +E
Sbjct: 121 TGDVLEPEGGVMGIGSGGNYALAAGRALADTDYDAETIARKAMAVAAEICVYTNASVTVE 180
Query: 184 TLKVGD 189
+L +
Sbjct: 181 SLDTAE 186
>gi|323138812|ref|ZP_08073876.1| 20S proteasome, A and B subunits [Methylocystis sp. ATCC 49242]
gi|322395960|gb|EFX98497.1| 20S proteasome, A and B subunits [Methylocystis sp. ATCC 49242]
Length = 187
Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats.
Identities = 127/184 (69%), Positives = 153/184 (83%), Gaps = 4/184 (2%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
+++ MHATTI+ V+K G VIAGDGQVSLGQT+MK NARKVRRLGKG++IAGFAG++
Sbjct: 4 EQNKTPGMHATTIILVKKQGQTVIAGDGQVSLGQTIMKGNARKVRRLGKGDVIAGFAGAT 63
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTL ERLE KL+QYP QL+R+ VELAKDWRMD+YLR LEAM+L+AD+ + LV+TG G
Sbjct: 64 ADAFTLFERLESKLDQYPGQLMRACVELAKDWRMDRYLRRLEAMMLVADQNVGLVLTGSG 123
Query: 126 DVLEPENG----VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
DVLEPE V AIGSGG+YAL+A RAL+ T AE IAR+AMSIAADICVYTNHN+V
Sbjct: 124 DVLEPEGDANGAVAAIGSGGNYALAAGRALIDTPADAETIARRAMSIAADICVYTNHNVV 183
Query: 182 LETL 185
+E +
Sbjct: 184 VEKI 187
>gi|15643287|ref|NP_228331.1| ATP-dependent protease peptidase subunit [Thermotoga maritima MSB8]
gi|281411739|ref|YP_003345818.1| 20S proteasome A and B subunits [Thermotoga naphthophila RKU-10]
gi|11133189|sp|Q9WYZ1|HSLV_THEMA RecName: Full=ATP-dependent protease subunit HslV; Flags: Precursor
gi|4981034|gb|AAD35606.1|AE001728_7 heat shock protein HslV [Thermotoga maritima MSB8]
gi|281372842|gb|ADA66404.1| 20S proteasome A and B subunits [Thermotoga naphthophila RKU-10]
Length = 176
Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats.
Identities = 95/176 (53%), Positives = 129/176 (73%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+K H TTIL VR++G V+ GDGQV+ G TV+K NARKVR+LG+G ++AGFAGS ADA T
Sbjct: 1 MKFHGTTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMT 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L +R E KL ++ L +++VELAKDWR D+ LR LEA++L+ADK +I+G G+V++P
Sbjct: 61 LFDRFEAKLREWGGNLTKAAVELAKDWRTDRVLRRLEALLLVADKENIFIISGNGEVIQP 120
Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++ AIGSGG Y +A L +T SA EI KAM+IA +IC+YTN NIV+E +
Sbjct: 121 DDDAAAIGSGGPYALAAAKALLRNTDLSAREIVEKAMTIAGEICIYTNQNIVIEEV 176
>gi|156973045|ref|YP_001443952.1| ATP-dependent protease peptidase subunit [Vibrio harveyi ATCC
BAA-1116]
gi|269959685|ref|ZP_06174065.1| ATP-dependent protease HslV [Vibrio harveyi 1DA3]
gi|166223005|sp|A7MWJ4|HSLV_VIBHB RecName: Full=ATP-dependent protease subunit HslV
gi|156524639|gb|ABU69725.1| hypothetical protein VIBHAR_00724 [Vibrio harveyi ATCC BAA-1116]
gi|269835608|gb|EEZ89687.1| ATP-dependent protease HslV [Vibrio harveyi 1DA3]
Length = 183
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 103/172 (59%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG+YA +AA AL+ +T A EIA KA++IA DICV+TNH+ +E L+
Sbjct: 122 AIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEELE 173
>gi|255263830|ref|ZP_05343172.1| ATP-dependent protease HslV [Thalassiobium sp. R2A62]
gi|255106165|gb|EET48839.1| ATP-dependent protease HslV [Thalassiobium sp. R2A62]
Length = 185
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 120/185 (64%), Positives = 144/185 (77%), Gaps = 3/185 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D + H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G +++AGF
Sbjct: 1 MADSDFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGHDVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D T LVI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGTDLLVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR L AE+IAR+AM+IA+DICVYTN N+
Sbjct: 120 TGAGDVLEPEHNVAAIGSGGNFALAAARGLYDGDKPAEDIARQAMAIASDICVYTNGNLT 179
Query: 182 LETLK 186
+E +K
Sbjct: 180 VEVIK 184
>gi|254759318|ref|ZP_05211343.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
Australia 94]
Length = 180
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 98/177 (55%), Positives = 131/177 (74%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G VMK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA AL +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGCALKQYASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 180
>gi|262277813|ref|ZP_06055606.1| ATP-dependent protease HslVU, peptidase subunit [alpha
proteobacterium HIMB114]
gi|262224916|gb|EEY75375.1| ATP-dependent protease HslVU, peptidase subunit [alpha
proteobacterium HIMB114]
Length = 183
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 111/183 (60%), Positives = 146/183 (79%), Gaps = 1/183 (0%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + H TTI+ +RK VV+AGDGQVS+G TVMK+ A+KVR++ K ++IAGFAG
Sbjct: 1 MEQNKDRLDWHGTTIVLIRKGNDVVVAGDGQVSIGNTVMKSTAKKVRKIEKRDVIAGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
S+ADAFTL ERLE KLE++ QL R++VELAKDWR DKYLR LEA++ +ADK + +I+G
Sbjct: 61 STADAFTLFERLEAKLEKHGGQLTRAAVELAKDWRSDKYLRRLEALMAVADKKNSFIISG 120
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVL 182
GDVLEPE+G++AIGSGG+YAL+AARA++ + +AEEIA+K++ IAADICV+TNHNI
Sbjct: 121 NGDVLEPEHGIIAIGSGGNYALAAARAMIDDPKKTAEEIAKKSIEIAADICVFTNHNITT 180
Query: 183 ETL 185
E L
Sbjct: 181 EKL 183
>gi|160896906|ref|YP_001562488.1| ATP-dependent protease peptidase subunit [Delftia acidovorans
SPH-1]
gi|238065853|sp|A9BUJ5|HSLV_DELAS RecName: Full=ATP-dependent protease subunit HslV
gi|160362490|gb|ABX34103.1| 20S proteasome A and B subunits [Delftia acidovorans SPH-1]
Length = 181
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 99/179 (55%), Positives = 137/179 (76%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTI++VR+ V I GDGQV+LG V+K ARKVR+L G ++AGFAG++AD
Sbjct: 3 QYHGTTIISVRRQTPEGVQVAIGGDGQVTLGNIVVKGTARKVRKLYHGKVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ L R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADASASLIITGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE G+++IGSGG+YA SAA+AL+ +T+ SAEEI RK+++IA ++C+YTN + +ETL
Sbjct: 123 LEPEQGIVSIGSGGAYAHSAAKALLTNTELSAEEIVRKSLAIAGELCIYTNMHHTVETL 181
>gi|284159403|ref|YP_440723.3| ATP-dependent protease peptidase subunit [Burkholderia
thailandensis E264]
gi|83654306|gb|ABC38369.1| protease HslVU, subunit HslV [Burkholderia thailandensis E264]
Length = 214
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 101/176 (57%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 39 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 98
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 99 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 158
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T S EI K+++IA D+C+YTNHN ++ET++
Sbjct: 159 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKSLAIAGDMCIYTNHNRIIETIE 214
>gi|221236779|ref|YP_002519216.1| ATP-dependent protease peptidase subunit [Caulobacter crescentus
NA1000]
gi|220965952|gb|ACL97308.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
[Caulobacter crescentus NA1000]
Length = 200
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 117/188 (62%), Positives = 144/188 (76%), Gaps = 5/188 (2%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ + H TTIL VRK+G VIAGDGQVS+G TV+K NARKVRRL G ++AGFA
Sbjct: 13 MQSNSSSFPDWHGTTILAVRKNGSTVIAGDGQVSMGPTVVKGNARKVRRLAGGKVVAGFA 72
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL+ERLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+ADKT +T
Sbjct: 73 GATADAFTLIERLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADKTAIYTVT 132
Query: 123 GMGDVLEPEN-----GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTN 177
G+GDVLEP V AIGSGG+YAL+A +AL+ SAE+IARKAM IAA+ICVYTN
Sbjct: 133 GVGDVLEPGESLGGGAVAAIGSGGNYALAAGKALIDLDLSAEDIARKAMGIAAEICVYTN 192
Query: 178 HNIVLETL 185
N+ +E+L
Sbjct: 193 GNLTVESL 200
>gi|152976196|ref|YP_001375713.1| ATP-dependent protease peptidase subunit [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|189043929|sp|A7GRG0|HSLV_BACCN RecName: Full=ATP-dependent protease subunit HslV
gi|152024948|gb|ABS22718.1| 20S proteasome A and B subunits [Bacillus cytotoxicus NVH 391-98]
Length = 180
Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats.
Identities = 97/177 (54%), Positives = 130/177 (73%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI + +G +AGDGQV+ G VMK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAIHHNGKCAMAGDGQVTFGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ D+T L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDETTLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG YAL+A RAL +A+EIA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGHYALAAGRALKRHASEHLTAKEIAKASLEIAGDICVYTNHNIIVEEL 180
>gi|89895296|ref|YP_518783.1| ATP-dependent protease peptidase subunit [Desulfitobacterium
hafniense Y51]
gi|122482355|sp|Q24UF3|HSLV_DESHY RecName: Full=ATP-dependent protease subunit HslV
gi|89334744|dbj|BAE84339.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 176
Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats.
Identities = 103/175 (58%), Positives = 137/175 (78%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V +AGDGQV++GQ TVMK ARKVRRL G ++AGFAGS ADAFTL
Sbjct: 2 FHATTIVAVKKGEQVAMAGDGQVTMGQATVMKHKARKVRRLFHGKVLAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAKDWRMDK LRNLEA++++ADK L+I+G G+V+EP+
Sbjct: 62 FEKFENKLEEYQGNLQRAAVELAKDWRMDKALRNLEALLIVADKQSMLLISGSGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG+YAL+AARAL+ +T ++ ++AM +A+ ICVYTN I++E L
Sbjct: 122 DGIAAIGSGGNYALAAARALVKNTDLQPAQLVQEAMEVASSICVYTNDQIIVEEL 176
>gi|298530976|ref|ZP_07018377.1| 20S proteasome A and B subunits [Desulfonatronospira thiodismutans
ASO3-1]
gi|298508999|gb|EFI32904.1| 20S proteasome A and B subunits [Desulfonatronospira thiodismutans
ASO3-1]
Length = 178
Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats.
Identities = 107/178 (60%), Positives = 143/178 (80%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ TTIL V+K+G + +AGDGQV++GQ+ VMK ARKVRR+ K +++AGFAG++ADAF
Sbjct: 1 MTFEGTTILAVKKNGRIAMAGDGQVTMGQSIVMKHTARKVRRMYKDSVLAGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER E KLE+Y LLR+SVELAK+WRMDKYLR LEA++++ADK L+I+G GDV+E
Sbjct: 61 TLFERFEAKLEEYRGNLLRASVELAKEWRMDKYLRRLEALLVVADKENVLIISGTGDVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P++G+ AIGSGG YAL+A+RAL+ +T+ SAE+I + M IAA ICVYTN+NIV E +
Sbjct: 121 PDDGIAAIGSGGPYALAASRALVDNTELSAEDIVNQGMQIAARICVYTNNNIVTEKID 178
>gi|323489573|ref|ZP_08094800.1| ATP-dependent protease subunit HslV [Planococcus donghaensis
MPA1U2]
gi|323396704|gb|EGA89523.1| ATP-dependent protease subunit HslV [Planococcus donghaensis
MPA1U2]
Length = 181
Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats.
Identities = 98/179 (54%), Positives = 126/179 (70%), Gaps = 4/179 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI VR +G ++GDGQV+ G VMK ARKVR+L G ++ GFAGS ADAFT
Sbjct: 3 EFHATTIFAVRHNGQCAMSGDGQVTFGNAVVMKHTARKVRKLYNGQVLTGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KL +Y L R++VELAK WR DK LR LEAM++I +K L+++G G+V+EP
Sbjct: 63 LFEMFEGKLTEYNGNLQRAAVELAKQWRGDKMLRQLEAMLIIMNKDELLLVSGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLK 186
++G++AIGSGG+YAL+A RAL A EIA+ A+ AADICVYTNH IV+E L
Sbjct: 123 DDGILAIGSGGNYALAAGRALKKFAGDHFTASEIAKSALETAADICVYTNHQIVVEELS 181
>gi|15615027|ref|NP_243330.1| ATP-dependent protease peptidase subunit [Bacillus halodurans
C-125]
gi|11133069|sp|Q9KA26|HSLV_BACHD RecName: Full=ATP-dependent protease subunit HslV
gi|10175084|dbj|BAB06183.1| beta-type subunit of the 20S proteasome [Bacillus halodurans C-125]
Length = 180
Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats.
Identities = 93/178 (52%), Positives = 129/178 (72%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ HATTI + +G +AGDGQV+ G VMK ARKVR++ G ++AGFAGS ADAF
Sbjct: 3 MTFHATTIFAIHHNGKCAMAGDGQVTFGNAVVMKHTARKVRKIYHGKVLAGFAGSVADAF 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE++ L RS+VE+AK+WR DK LR LEAM+++ ++ L+++G G+V+E
Sbjct: 63 TLFEKFEAKLEEFNGNLQRSAVEVAKEWRSDKVLRRLEAMLIVMNEEHLLLVSGTGEVIE 122
Query: 130 PENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGG+YAL+A RAL Q SA EIA+ A+ A DICVYTN +++E L
Sbjct: 123 PDDGILAIGSGGNYALAAGRALKKKAPQLSAREIAQAALETAGDICVYTNDQLIVEEL 180
>gi|254459656|ref|ZP_05073072.1| ATP-dependent protease HslV [Rhodobacterales bacterium HTCC2083]
gi|206676245|gb|EDZ40732.1| ATP-dependent protease HslV [Rhodobacteraceae bacterium HTCC2083]
Length = 185
Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats.
Identities = 119/186 (63%), Positives = 142/186 (76%), Gaps = 3/186 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M + H TTI+ VRK G VVIAGDGQVSLGQTV+K A+KVRRL G +++ GF
Sbjct: 1 MSSNEFP-GWHGTTIIGVRKGGEVVIAGDGQVSLGQTVIKGTAKKVRRLSPGGYDVVCGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D VI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGKDLFVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR LM +AEEIARKAM+IA+DICVYTN +
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNFALAAARGLMEGDGTAEEIARKAMAIASDICVYTNGKLT 179
Query: 182 LETLKV 187
+ET+K
Sbjct: 180 VETIKA 185
>gi|238898391|ref|YP_002924072.1| peptidase component of the HslUV protease [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|259491390|sp|C4K5T1|HSLV_HAMD5 RecName: Full=ATP-dependent protease subunit HslV
gi|229466150|gb|ACQ67924.1| peptidase component of the HslUV protease [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 178
Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats.
Identities = 97/173 (56%), Positives = 132/173 (76%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VVI GDGQV+LG TVMK NA+KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRHNHVVIGGDGQVTLGNTVMKGNAKKVRRLHHDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ QL +++VE+AKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 EAKLKLCSGQLTKAAVEMAKDWRTDRMLRRLEALLAVADETASLIITGNGDVIQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG YA ++ARAL+ +T SA EI K+++IA +IC+YTN +E LK+
Sbjct: 122 AIGSGGPYAQASARALLENTNLSAREIVEKSLTIAGNICIYTNQYPTIEELKI 174
>gi|332142913|ref|YP_004428651.1| ATP-dependent protease subunit HslV [Alteromonas macleodii str.
'Deep ecotype']
gi|332143042|ref|YP_004428780.1| ATP-dependent protease subunit HslV [Alteromonas macleodii str.
'Deep ecotype']
gi|327552935|gb|AEA99653.1| ATP-dependent protease subunit HslV [Alteromonas macleodii str.
'Deep ecotype']
gi|327553064|gb|AEA99782.1| ATP-dependent protease subunit HslV [Alteromonas macleodii str.
'Deep ecotype']
Length = 174
Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats.
Identities = 101/172 (58%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VV+AGDGQVSLG TVMK NARKVRRL I+AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGNQVVMAGDGQVSLGNTVMKGNARKVRRLYHDKILAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + L +++VELAKDWR D+ LR LEA++ +AD+T + +ITG GDV++PE ++
Sbjct: 62 EAKLEAHQGHLTKAAVELAKDWRTDRALRKLEALLAVADETASFIITGNGDVVQPEQDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG+YA +AA AL+ +T+ SA++IA KA++IA DICV+TNH+ ++ L
Sbjct: 122 AIGSGGNYAQAAATALLDNTELSAKDIAEKALTIAGDICVFTNHSQTVDVLD 173
>gi|288818588|ref|YP_003432936.1| ATP-dependent protease [Hydrogenobacter thermophilus TK-6]
gi|288787988|dbj|BAI69735.1| ATP-dependent protease [Hydrogenobacter thermophilus TK-6]
gi|308752179|gb|ADO45662.1| 20S proteasome A and B subunits [Hydrogenobacter thermophilus TK-6]
Length = 177
Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats.
Identities = 97/177 (54%), Positives = 133/177 (75%), Gaps = 1/177 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ +H+TTIL VR+D VI GDGQV+LG +V+K A+K+R+L ++ GFAGS+AD
Sbjct: 1 MSLHSTTILAVRRDNTTVIGGDGQVTLGHSVIKHGAKKIRKLYNDRVLVGFAGSAADGLA 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L+ERLE KLE++ L+R+ VELAK+WRMDKYLR LEAM+L+ DK L+++G GDV+EP
Sbjct: 61 LMERLEAKLEEFRGNLVRACVELAKEWRMDKYLRRLEAMLLVVDKDNMLLLSGNGDVIEP 120
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ V+AIGSGG +A SAA AL T SAEEI ++A+ IA++IC+YTN N V+E +
Sbjct: 121 DEPVIAIGSGGDFARSAALALYRHTNMSAEEIVKEALKIASEICIYTNSNFVIEKVS 177
>gi|91226629|ref|ZP_01261353.1| ATP-dependent protease peptidase subunit [Vibrio alginolyticus
12G01]
gi|91189103|gb|EAS75385.1| ATP-dependent protease peptidase subunit [Vibrio alginolyticus
12G01]
Length = 183
Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats.
Identities = 103/176 (58%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG+YA +AA AL+ +T A EIA KA++IA DICV+TNH+ +E L E
Sbjct: 122 AIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEELDSTAE 177
>gi|295691593|ref|YP_003595286.1| 20S proteasome subunits A/b [Caulobacter segnis ATCC 21756]
gi|295433496|gb|ADG12668.1| 20S proteasome A and B subunits [Caulobacter segnis ATCC 21756]
Length = 188
Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats.
Identities = 118/188 (62%), Positives = 145/188 (77%), Gaps = 5/188 (2%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ G+ H TTIL VRK+G VIAGDGQVS+G TV+K NARKVRRL G ++AGFA
Sbjct: 1 MQGNNSTFPDWHGTTILAVRKNGQTVIAGDGQVSMGPTVVKGNARKVRRLAGGKVVAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL+ERLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+AD T +T
Sbjct: 61 GATADAFTLIERLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADNTAIYTVT 120
Query: 123 GMGDVLEPEN-----GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTN 177
G+GDVLEP V AIGSGG+YAL+AA+AL+ SAE+IARKAM IAA+ICVYTN
Sbjct: 121 GVGDVLEPGESVGGGAVAAIGSGGNYALAAAKALIDQDLSAEDIARKAMGIAAEICVYTN 180
Query: 178 HNIVLETL 185
N+ +E+L
Sbjct: 181 GNLTVESL 188
>gi|145297301|ref|YP_001140142.1| ATP-dependent protease peptidase subunit [Aeromonas salmonicida
subsp. salmonicida A449]
gi|166221621|sp|A4SHM2|HSLV_AERS4 RecName: Full=ATP-dependent protease subunit HslV
gi|142850073|gb|ABO88394.1| ATp-dependent protease HslVU, peptidase subunit HslV [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 177
Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats.
Identities = 98/172 (56%), Positives = 130/172 (75%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVI GDGQVSLG TVMK NARKV RL G ++AGFAG +ADAFTLLER
Sbjct: 2 TTIVSVRRNGQVVIGGDGQVSLGNTVMKGNARKVHRLYNGKVLAGFAGGTADAFTLLERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L R++V LAKDWR D+ LR LEA++ +AD+ + +ITG GDV++PE ++
Sbjct: 62 EAKLQAHQGNLERAAVALAKDWRTDRALRRLEALLAVADEHKSFIITGNGDVVQPEQDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++A SAA AL+ +T+ A+ I K++ IA DICV+TN N +E L
Sbjct: 122 AIGSGGNFAQSAAIALLENTELDAKTIVEKSLKIAGDICVFTNGNHTIEVLD 173
>gi|16127957|ref|NP_422521.1| ATP-dependent protease peptidase subunit [Caulobacter crescentus
CB15]
gi|21759201|sp|Q9A239|HSLV_CAUCR RecName: Full=ATP-dependent protease subunit HslV
gi|13425497|gb|AAK25689.1| heat shock protein HslV [Caulobacter crescentus CB15]
Length = 188
Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats.
Identities = 117/188 (62%), Positives = 144/188 (76%), Gaps = 5/188 (2%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ + H TTIL VRK+G VIAGDGQVS+G TV+K NARKVRRL G ++AGFA
Sbjct: 1 MQSNSSSFPDWHGTTILAVRKNGSTVIAGDGQVSMGPTVVKGNARKVRRLAGGKVVAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL+ERLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+ADKT +T
Sbjct: 61 GATADAFTLIERLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADKTAIYTVT 120
Query: 123 GMGDVLEPEN-----GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTN 177
G+GDVLEP V AIGSGG+YAL+A +AL+ SAE+IARKAM IAA+ICVYTN
Sbjct: 121 GVGDVLEPGESLGGGAVAAIGSGGNYALAAGKALIDLDLSAEDIARKAMGIAAEICVYTN 180
Query: 178 HNIVLETL 185
N+ +E+L
Sbjct: 181 GNLTVESL 188
>gi|269964740|ref|ZP_06178978.1| ATP-dependent protease HslV [Vibrio alginolyticus 40B]
gi|269830639|gb|EEZ84860.1| ATP-dependent protease HslV [Vibrio alginolyticus 40B]
Length = 183
Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats.
Identities = 102/172 (59%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG+YA +AA AL+ +T A EIA KA++IA DICV+TNH+ +E L
Sbjct: 122 AIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEELD 173
>gi|217076580|ref|YP_002334296.1| ATP-dependent protease peptidase subunit [Thermosipho africanus
TCF52B]
gi|226704548|sp|B7IFU1|HSLV_THEAB RecName: Full=ATP-dependent protease subunit HslV
gi|217036433|gb|ACJ74955.1| heat shock protein HslV [Thermosipho africanus TCF52B]
Length = 176
Score = 283 bits (726), Expect = 7e-75, Method: Composition-based stats.
Identities = 88/176 (50%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+K +TT++ VR++ VV+ DGQV+ G T++K NA+KVR++G GN++AGFAGS ADA
Sbjct: 1 MKWRSTTVVCVRRNDSVVMISDGQVTYGNTILKGNAKKVRKMGDGNVLAGFAGSVADAMA 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L +R E K ++ LL+++VELAKDWR D+ LR LEAM+L+ADK T +++G G+V++P
Sbjct: 61 LFDRFEAKYREWGGNLLKAAVELAKDWRTDRVLRRLEAMLLVADKKYTFIVSGTGEVIQP 120
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E+ + +IGSG YA++A +AL+ T SA+EIA +A+ IA++IC+YTN N +E L
Sbjct: 121 EDDIASIGSGSPYAIAAGKALLRHTDLSAKEIALEAIKIASEICIYTNDNFTIEEL 176
>gi|24375648|ref|NP_719691.1| ATP-dependent protease peptidase subunit [Shewanella oneidensis
MR-1]
gi|113971850|ref|YP_735643.1| ATP-dependent protease peptidase subunit [Shewanella sp. MR-4]
gi|114045944|ref|YP_736494.1| ATP-dependent protease peptidase subunit [Shewanella sp. MR-7]
gi|117922131|ref|YP_871323.1| ATP-dependent protease peptidase subunit [Shewanella sp. ANA-3]
gi|34222561|sp|Q8E9V0|HSLV_SHEON RecName: Full=ATP-dependent protease subunit HslV
gi|122945000|sp|Q0HZL8|HSLV_SHESR RecName: Full=ATP-dependent protease subunit HslV
gi|123029282|sp|Q0HED1|HSLV_SHESM RecName: Full=ATP-dependent protease subunit HslV
gi|166223002|sp|A0L1J8|HSLV_SHESA RecName: Full=ATP-dependent protease subunit HslV
gi|24350562|gb|AAN57135.1|AE015849_2 ATP-dependent protease HslV [Shewanella oneidensis MR-1]
gi|113886534|gb|ABI40586.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella sp. MR-4]
gi|113887386|gb|ABI41437.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella sp. MR-7]
gi|117614463|gb|ABK49917.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella sp. ANA-3]
Length = 174
Score = 283 bits (726), Expect = 7e-75, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + LLRS+VELAKDWR D+ LR LEAM+++AD +L+ITG GDV++PE+ ++
Sbjct: 62 ESKLEMHQGHLLRSAVELAKDWRTDRMLRKLEAMLVVADAEASLIITGNGDVVQPEHDLV 121
Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+Y +A L +T+ SA EIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAGDICVFTNQFKTIEEL 172
>gi|159045980|ref|YP_001534774.1| ATP-dependent protease peptidase subunit [Dinoroseobacter shibae
DFL 12]
gi|189028447|sp|A8LPA8|HSLV_DINSH RecName: Full=ATP-dependent protease subunit HslV
gi|157913740|gb|ABV95173.1| ATP-dependent HslUV protease [Dinoroseobacter shibae DFL 12]
Length = 185
Score = 283 bits (726), Expect = 7e-75, Method: Composition-based stats.
Identities = 117/186 (62%), Positives = 144/186 (77%), Gaps = 3/186 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M + + H TTI+ V+K+G VV+AGDGQVSLGQTV+K ARKVRRL G +++AGF
Sbjct: 1 MTETSFP-GWHGTTIIGVKKNGKVVVAGDGQVSLGQTVIKGTARKVRRLTPGGHDVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R++VELAKDWR DKYL+ LEAM+++ D ++ LVI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLQRAAVELAKDWRTDKYLQKLEAMLIVTDGSLLLVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ + AIGSGG++AL+AAR LM AE IARKAM IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDIAAIGSGGNFALAAARGLMEADFDAETIARKAMQIAADICVYTNGNLT 179
Query: 182 LETLKV 187
+E +
Sbjct: 180 VEAIDA 185
>gi|319945235|ref|ZP_08019497.1| ATP-dependent protease HslV [Lautropia mirabilis ATCC 51599]
gi|319741805|gb|EFV94230.1| ATP-dependent protease HslV [Lautropia mirabilis ATCC 51599]
Length = 172
Score = 283 bits (726), Expect = 7e-75, Method: Composition-based stats.
Identities = 99/171 (57%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ V + GDGQV+LG V+K ARKVRRLG ++AGFAG +ADAFTL +R
Sbjct: 2 TTIVSVRRGDSVALGGDGQVTLGNIVVKGTARKVRRLGGNKVLAGFAGGTADAFTLFDRF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE+YP L++++VELAK+WR D+ LR LEAM+ +ADK +L+ITG GDVLEPE+G++
Sbjct: 62 EAQLERYPANLMKAAVELAKEWRTDRVLRRLEAMLAVADKQHSLIITGNGDVLEPEHGLV 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA SAA AL+ +T+ S EI +K++ IA D+C+YTN N +ETL
Sbjct: 122 AIGSGGAYAQSAALALLENTELSPTEIVQKSLKIAGDLCIYTNQNHTIETL 172
>gi|148269542|ref|YP_001244002.1| ATP-dependent protease peptidase subunit [Thermotoga petrophila
RKU-1]
gi|170288217|ref|YP_001738455.1| 20S proteasome A and B subunits [Thermotoga sp. RQ2]
gi|189036249|sp|A5IJQ3|HSLV_THEP1 RecName: Full=ATP-dependent protease subunit HslV
gi|238065945|sp|B1L8X4|HSLV_THESQ RecName: Full=ATP-dependent protease subunit HslV
gi|147735086|gb|ABQ46426.1| 20S proteasome, A and B subunits [Thermotoga petrophila RKU-1]
gi|170175720|gb|ACB08772.1| 20S proteasome A and B subunits [Thermotoga sp. RQ2]
Length = 176
Score = 283 bits (725), Expect = 7e-75, Method: Composition-based stats.
Identities = 95/176 (53%), Positives = 128/176 (72%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+K H TTIL VR++G V+ GDGQV+ G TV+K NARKVR+LG+G ++AGFAGS ADA T
Sbjct: 1 MKFHGTTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMT 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L +R E KL ++ L +++VELAKDWR D+ LR LEA++L+ADK +I+G G+V++P
Sbjct: 61 LFDRFEAKLREWGGNLTKAAVELAKDWRTDRVLRRLEALLLVADKENIFIISGNGEVIQP 120
Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++ AIGSGG Y +A L +T SA EI KAM IA +IC+YTN NIV+E +
Sbjct: 121 DDDAAAIGSGGPYALAAAKALLRNTDLSAREIVEKAMMIAGEICIYTNQNIVIEEV 176
>gi|213018560|ref|ZP_03334368.1| heat shock protein HslV [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995511|gb|EEB56151.1| heat shock protein HslV [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 176
Score = 283 bits (725), Expect = 7e-75, Method: Composition-based stats.
Identities = 118/175 (67%), Positives = 152/175 (86%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M+ TTIL++R+D VV+ GDGQVSLG TV+K+ ARKVRRL ++IAGFAG++ADAFTL
Sbjct: 1 MYGTTILSIRRDKNVVVIGDGQVSLGHTVIKSGARKVRRLSGDSVIAGFAGATADAFTLF 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KL+++P QL+R+ VELAKDWRMDKYLR LEAM+++ADK+I+LVITG GDVLEPE+
Sbjct: 61 ERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGDVLEPED 120
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG++ALSAA+AL+ + S EEIA+KAM IAADICVYTNHN+++E ++
Sbjct: 121 GIAAIGSGGNFALSAAKALIDVEGISIEEIAKKAMKIAADICVYTNHNLIIEKIE 175
>gi|28897024|ref|NP_796629.1| ATP-dependent protease peptidase subunit [Vibrio parahaemolyticus
RIMD 2210633]
gi|153840681|ref|ZP_01993348.1| ATP-dependent protease HslV [Vibrio parahaemolyticus AQ3810]
gi|260362283|ref|ZP_05775250.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus K5030]
gi|260897598|ref|ZP_05906094.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus Peru-466]
gi|260899528|ref|ZP_05907923.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus AQ4037]
gi|31340156|sp|Q87T20|HSLV_VIBPA RecName: Full=ATP-dependent protease subunit HslV
gi|28805232|dbj|BAC58513.1| protease HslVU, subunit HslV [Vibrio parahaemolyticus RIMD 2210633]
gi|149745630|gb|EDM56788.1| ATP-dependent protease HslV [Vibrio parahaemolyticus AQ3810]
gi|308087505|gb|EFO37200.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus Peru-466]
gi|308108817|gb|EFO46357.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus AQ4037]
gi|308111328|gb|EFO48868.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus K5030]
Length = 183
Score = 283 bits (725), Expect = 7e-75, Method: Composition-based stats.
Identities = 104/176 (59%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG+YA +AA AL+ +T A EIA KA++IA DICV+TNH+ +E L E
Sbjct: 122 AIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEELDSTTE 177
>gi|295399803|ref|ZP_06809784.1| 20S proteasome A and B subunits [Geobacillus thermoglucosidasius
C56-YS93]
gi|312111685|ref|YP_003990001.1| 20S proteasome A and subunit betas [Geobacillus sp. Y4.1MC1]
gi|294978206|gb|EFG53803.1| 20S proteasome A and B subunits [Geobacillus thermoglucosidasius
C56-YS93]
gi|311216786|gb|ADP75390.1| 20S proteasome A and B subunits [Geobacillus sp. Y4.1MC1]
Length = 180
Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats.
Identities = 98/178 (55%), Positives = 132/178 (74%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI + +G +AGDGQV+ G VMK A+KVRRL +G ++AGFAGS ADAFT
Sbjct: 3 QFHATTIFAIHHNGKAAMAGDGQVTFGNAVVMKHTAKKVRRLFQGKVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KLE++ L R++VELAK+WR DK LR LEAM+++ D L+I+G G+V+EP
Sbjct: 63 LFEMFEGKLEEFNGNLPRAAVELAKEWRSDKVLRRLEAMLIVMDARHLLLISGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YAL+A RAL Q SA+EIA+ A+ IAA+ICVYTN +I++E L
Sbjct: 123 DDGMLAIGSGGNYALAAGRALKQYAGDQLSAKEIAKAALEIAANICVYTNGHIIVEEL 180
>gi|150020135|ref|YP_001305489.1| ATP-dependent protease peptidase subunit [Thermosipho melanesiensis
BI429]
gi|189036248|sp|A6LJK3|HSLV_THEM4 RecName: Full=ATP-dependent protease subunit HslV
gi|149792656|gb|ABR30104.1| 20S proteasome, A and B subunits [Thermosipho melanesiensis BI429]
Length = 176
Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats.
Identities = 91/176 (51%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+K +TT++ VRK+ VV+ DGQV+ G T+MK NA+KVR++G+GN++AGFAGS ADA
Sbjct: 1 MKWRSTTVVCVRKNDSVVMVSDGQVTYGNTIMKGNAKKVRKMGEGNVLAGFAGSVADAMA 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L +R E K ++ LL+S+VELAKDWR D+ LR LEA++L+ADK T +I+G G+V++P
Sbjct: 61 LFDRFEAKYREWGGNLLKSAVELAKDWRTDRVLRRLEALLLVADKKYTFIISGTGEVIQP 120
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E+ + +IGSG YA++A RAL+ T SA+EIA +++ IA++IC+YTN N +E L
Sbjct: 121 EDDIASIGSGSPYAIAAGRALLKHTNLSAKEIALESIRIASEICIYTNDNFTIEEL 176
>gi|254439232|ref|ZP_05052726.1| peptidase, T1 family [Octadecabacter antarcticus 307]
gi|198254678|gb|EDY78992.1| peptidase, T1 family [Octadecabacter antarcticus 307]
Length = 186
Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats.
Identities = 122/179 (68%), Positives = 143/179 (79%), Gaps = 2/179 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSAD 67
+ H TTI+ VRK G VVIAGDGQVS+GQTVMK ARKVRRL G ++I GFAGS+AD
Sbjct: 6 SPGWHGTTIIGVRKGGEVVIAGDGQVSIGQTVMKGTARKVRRLTAGGNDVICGFAGSTAD 65
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTLLERLEKKLE P QL R+SVELAKDWR DKYL+ LEAM++++D VITG GDV
Sbjct: 66 AFTLLERLEKKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGKDLFVITGAGDV 125
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
LEPE V AIGSGG++ALSA RALM +AEEIAR+AM+IA+DICVYTN N+ +ET+K
Sbjct: 126 LEPEYDVTAIGSGGNFALSAGRALMDLDFTAEEIARRAMAIASDICVYTNGNLTVETIK 184
>gi|154686031|ref|YP_001421192.1| ATP-dependent protease peptidase subunit [Bacillus
amyloliquefaciens FZB42]
gi|166221623|sp|A7Z4N5|CLPQ_BACA2 RecName: Full=ATP-dependent protease subunit ClpQ
gi|154351882|gb|ABS73961.1| ClpQ [Bacillus amyloliquefaciens FZB42]
Length = 181
Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats.
Identities = 98/178 (55%), Positives = 132/178 (74%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ +G ++GDGQV+ GQ VMK ARKVR+L G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHNGKSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R+SVELAK+WR DK LR LEAM+++ ++ L+++G G+V+EP+
Sbjct: 64 FEMFEAKLEEYNGNLKRASVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG+YALSA RAL + SA++IA+ A+ IA +ICVYTN I+LE L+
Sbjct: 124 DGILAIGSGGNYALSAGRALKTYAGENLSAKDIAKAALKIAGEICVYTNDQIILEELE 181
>gi|260877942|ref|ZP_05890297.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus AN-5034]
gi|308090062|gb|EFO39757.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
parahaemolyticus AN-5034]
gi|328471828|gb|EGF42705.1| ATP-dependent protease subunit HslV [Vibrio parahaemolyticus 10329]
Length = 183
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 104/176 (59%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG+YA +AA AL+ +T A EIA KA++IA DICV+TNH+ +E L E
Sbjct: 122 AIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEELDSTAE 177
>gi|167579396|ref|ZP_02372270.1| ATP-dependent protease peptidase subunit [Burkholderia
thailandensis TXDOH]
gi|167617496|ref|ZP_02386127.1| ATP-dependent protease peptidase subunit [Burkholderia
thailandensis Bt4]
gi|257140627|ref|ZP_05588889.1| ATP-dependent protease peptidase subunit [Burkholderia
thailandensis E264]
Length = 178
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 101/176 (57%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T S EI K+++IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKSLAIAGDMCIYTNHNRIIETIE 178
>gi|121595972|ref|YP_987868.1| ATP-dependent protease peptidase subunit [Acidovorax sp. JS42]
gi|120608052|gb|ABM43792.1| HslV component of HslUV peptidase [Acidovorax sp. JS42]
Length = 193
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 98/179 (54%), Positives = 135/179 (75%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTIL+VR+ V + GDGQV+LG V+K ARKVR+L +G ++AGFAG++AD
Sbjct: 15 QYHGTTILSVRRQTADGIQVALGGDGQVTLGNIVVKGTARKVRKLYQGRVLAGFAGATAD 74
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ QL R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GDV
Sbjct: 75 AFTLFERFEAKLEKHQGQLTRAAIELTKDWRTDRVLRRLEAMLAVADHSASLIITGNGDV 134
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE G++AIGSGG+YA SAA+AL+ +T A EI +K++ IA ++C+YTN + +ETL
Sbjct: 135 LEPEQGIIAIGSGGAYAHSAAKALLSNTDLPAAEIVKKSLEIAGELCIYTNMHHTIETL 193
>gi|304414793|ref|ZP_07395752.1| ATP-dependent protease peptidase subunit [Candidatus Regiella
insecticola LSR1]
gi|304283145|gb|EFL91558.1| ATP-dependent protease peptidase subunit [Candidatus Regiella
insecticola LSR1]
Length = 181
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 98/172 (56%), Positives = 133/172 (77%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+D VV+ GDGQV+LG TVMK NA KVR L K +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRDNEVVMGGDGQVTLGNTVMKKNACKVRFLYKNQVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L +++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PE+ ++
Sbjct: 62 EKKLEAHQGHLTKAAVELAKDWRTDRMLRRLEALLAVADQNASLIITGNGDVIQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG YA S+ARAL+ +T+ SA++I K+++IA DIC+YTN ++ LK
Sbjct: 122 AIGSGGPYAQSSARALLENTKLSAKKIVEKSLNIAGDICIYTNRCQTIKELK 173
>gi|229918621|ref|YP_002887267.1| ATP-dependent protease peptidase subunit [Exiguobacterium sp. AT1b]
gi|229470050|gb|ACQ71822.1| 20S proteasome A and B subunits [Exiguobacterium sp. AT1b]
Length = 182
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 97/181 (53%), Positives = 132/181 (72%), Gaps = 3/181 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI VR +G ++GDGQV+ G V MK A+KVRRL G ++AGFAGS ADAFTL
Sbjct: 2 FHATTIFAVRHNGQCAMSGDGQVTFGNAVIMKNKAKKVRRLYGGKVVAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE Y L R++VELAK+WR DK LR LEA++++ D L+++G G+V+EP+
Sbjct: 62 FEKFESKLEMYNGNLPRAAVELAKEWRGDKMLRQLEALLIVMDAEHLLLVSGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
+G++AIGSGG+YAL+A RAL+ + SAEEIAR A+ IA ++CVYTN +++ET+
Sbjct: 122 DGILAIGSGGNYALAAGRALVRHSAEKSAEEIARAALEIAGELCVYTNDQVIVETIGGAA 181
Query: 190 E 190
E
Sbjct: 182 E 182
>gi|158421846|ref|YP_001523138.1| ATP-dependent protease peptidase subunit [Azorhizobium caulinodans
ORS 571]
gi|158328735|dbj|BAF86220.1| ATP-dependent protease [Azorhizobium caulinodans ORS 571]
Length = 197
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 119/178 (66%), Positives = 148/178 (83%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H ++ TTI+TVRK V IAGDGQV+LGQTV+KANARKVRRLGKG++I GFAG++AD
Sbjct: 19 HSPDTIYGTTIVTVRKGNRVAIAGDGQVTLGQTVLKANARKVRRLGKGDVIGGFAGATAD 78
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++AD ++LV+TG GDV
Sbjct: 79 AFTLFERLEAKLEQYPGQLQRAAVELAKDWRTDRYLRRLEAMMIVADANVSLVLTGTGDV 138
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE GV IGSGG YAL+AARAL+ +++ E I R+++ IAADICVYTN NI++ET+
Sbjct: 139 LEPEAGVAGIGSGGMYALAAARALLDREDAPEAIVRRSLEIAADICVYTNRNIIVETI 196
>gi|88658351|ref|YP_507783.1| ATP-dependent protease peptidase subunit [Ehrlichia chaffeensis
str. Arkansas]
gi|123492805|sp|Q2GFK0|HSLV_EHRCR RecName: Full=ATP-dependent protease subunit HslV
gi|88599808|gb|ABD45277.1| ATP-dependent protease HslV [Ehrlichia chaffeensis str. Arkansas]
Length = 189
Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats.
Identities = 106/187 (56%), Positives = 145/187 (77%), Gaps = 6/187 (3%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
+ M+ TTIL +R+ V+IAGDGQVSLG TV+K +A+K++RL +I GFAG++
Sbjct: 2 EHKDNSTMYGTTILCIRRGNKVIIAGDGQVSLGHTVIKNSAKKIKRLANDTVITGFAGAT 61
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTL ERLE KLE++P QLLR+ VELAKDWRMD+YLR LEAM+++ADK+++L+I+G G
Sbjct: 62 ADAFTLFERLESKLEKHPGQLLRACVELAKDWRMDRYLRRLEAMMIVADKSVSLIISGNG 121
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMST------QNSAEEIARKAMSIAADICVYTNHN 179
DVLEPENG+ AIGSGG+YAL+AA+AL + + E I AM IA++IC+YTN+N
Sbjct: 122 DVLEPENGIAAIGSGGNYALAAAKALCESNDQFSQNMTLEYIITTAMKIASEICIYTNNN 181
Query: 180 IVLETLK 186
I++E ++
Sbjct: 182 IIMEKIE 188
>gi|26991677|ref|NP_747102.1| ATP-dependent protease peptidase subunit [Pseudomonas putida
KT2440]
gi|228925262|ref|YP_001671270.2| ATP-dependent protease peptidase subunit [Pseudomonas putida GB-1]
gi|229328216|ref|YP_001270178.2| ATP-dependent protease peptidase subunit [Pseudomonas putida F1]
gi|34222531|sp|Q88D28|HSLV_PSEPK RecName: Full=ATP-dependent protease subunit HslV
gi|24986776|gb|AAN70566.1|AE016699_7 heat shock protein HslV [Pseudomonas putida KT2440]
Length = 176
Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats.
Identities = 104/175 (59%), Positives = 141/175 (80%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+GSGG+YA +AARAL++ T SA EIA A++IA DICV+TNHN+ +E + D
Sbjct: 122 AMGSGGAYAQAAARALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAD 176
>gi|167585120|ref|ZP_02377508.1| 20S proteasome A and B subunits [Burkholderia ubonensis Bu]
Length = 178
Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADANTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL+ +T+ S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALVENTELSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|89052676|ref|YP_508127.1| ATP-dependent protease peptidase subunit [Jannaschia sp. CCS1]
gi|122499800|sp|Q28W10|HSLV_JANSC RecName: Full=ATP-dependent protease subunit HslV
gi|88862225|gb|ABD53102.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Jannaschia sp. CCS1]
Length = 185
Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats.
Identities = 112/186 (60%), Positives = 142/186 (76%), Gaps = 3/186 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M + + H TTI+ VRK G VV+AGDGQVSLG TV+K +ARKVRRL G +++ GF
Sbjct: 1 MAKEEFP-GWHGTTIIGVRKGGKVVVAGDGQVSLGPTVIKGSARKVRRLSPGGYDVVCGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D + +I
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLQRASVELAKDWRTDKYLQKLEAMLIVTDGSELYII 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ + AIGSGG++AL+AAR +M + AE +AR AM+IA+DICVYTN N+
Sbjct: 120 TGAGDVLEPEHDIAAIGSGGNFALAAARGMMDSDKDAEAVARDAMAIASDICVYTNGNLT 179
Query: 182 LETLKV 187
+ET+
Sbjct: 180 VETISA 185
>gi|298293774|ref|YP_003695713.1| 20S proteasome A and subunit betas [Starkeya novella DSM 506]
gi|296930285|gb|ADH91094.1| 20S proteasome A and B subunits [Starkeya novella DSM 506]
Length = 183
Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats.
Identities = 117/182 (64%), Positives = 143/182 (78%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
H ++ TTI++VR V I GDGQV+LG TVMKANARKVRRLGKG++I GFAG++A
Sbjct: 2 NHAPDTIYGTTIVSVRSGSRVAIGGDGQVTLGNTVMKANARKVRRLGKGDVIGGFAGATA 61
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ITLV+TG GD
Sbjct: 62 DAFTLFERLEAKLEQYPGQLQRAAVELAKDWRTDRYLRRLEAMMIVADKNITLVLTGTGD 121
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
VLEPENG+ AIGSGG +AL+AARAL + E I RK++ IAADIC+YTN + +ET+
Sbjct: 122 VLEPENGITAIGSGGGFALAAARALADSGQDPEAIVRKSLGIAADICIYTNGQLTIETID 181
Query: 187 VG 188
Sbjct: 182 AA 183
>gi|261855922|ref|YP_003263205.1| 20S proteasome A and subunit betas [Halothiobacillus neapolitanus
c2]
gi|261836391|gb|ACX96158.1| 20S proteasome A and B subunits [Halothiobacillus neapolitanus c2]
Length = 179
Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats.
Identities = 102/176 (57%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL VRK+G VI GDGQV+LG TV+K NARKVRRL G+++AGFAG++ADAFTL
Sbjct: 4 FRGTTILCVRKNGQTVIGGDGQVTLGNTVVKGNARKVRRLYNGDVLAGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E KLE++ LLRS+VELAK+WR D+ +R LEAM+++AD+T L I+G GDV+EPE
Sbjct: 64 EKFEAKLEKFGGNLLRSAVELAKEWRTDRAMRRLEAMLVVADRTHMLTISGNGDVIEPET 123
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
++AIGSGG++A +AA ALM + A IA A++IA DIC+YTNHN+ +E L
Sbjct: 124 DLIAIGSGGAFAQAAATALMQHSALEARAIAEAALNIAGDICIYTNHNLTIEVLDA 179
>gi|53717846|ref|YP_106832.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
K96243]
gi|53724453|ref|YP_104728.1| ATP-dependent protease peptidase subunit [Burkholderia mallei ATCC
23344]
gi|167001362|ref|ZP_02267161.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
mallei PRL-20]
gi|167717565|ref|ZP_02400801.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
DM98]
gi|167736608|ref|ZP_02409382.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
14]
gi|167813706|ref|ZP_02445386.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
91]
gi|167822221|ref|ZP_02453692.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
9]
gi|167843816|ref|ZP_02469324.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
B7210]
gi|167892314|ref|ZP_02479716.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
7894]
gi|167900811|ref|ZP_02488016.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
NCTC 13177]
gi|167909031|ref|ZP_02496122.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
112]
gi|167917070|ref|ZP_02504161.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
BCC215]
gi|226830782|ref|YP_001064484.2| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
1106a]
gi|228969303|ref|YP_331800.2| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
1710b]
gi|228993244|ref|YP_001057244.2| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
668]
gi|229008325|ref|YP_994210.2| ATP-dependent protease peptidase subunit [Burkholderia mallei
SAVP1]
gi|229027668|ref|YP_001082948.2| ATP-dependent protease peptidase subunit [Burkholderia mallei NCTC
10247]
gi|229780996|ref|YP_001028137.2| ATP-dependent protease peptidase subunit [Burkholderia mallei NCTC
10229]
gi|242314355|ref|ZP_04813371.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
pseudomallei 1106b]
gi|254196175|ref|ZP_04902599.1| protease HslVU, subunit HslV [Burkholderia pseudomallei S13]
gi|254258080|ref|ZP_04949134.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
pseudomallei 1710a]
gi|254295747|ref|ZP_04963204.1| protease HslVU, subunit HslV [Burkholderia pseudomallei 406e]
gi|254359663|ref|ZP_04975934.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia mallei 2002721280]
gi|85542199|sp|Q62EZ9|HSLV_BURMA RecName: Full=ATP-dependent protease subunit HslV
gi|85542200|sp|Q63YI3|HSLV_BURPS RecName: Full=ATP-dependent protease subunit HslV
gi|229486312|sp|A3NQ63|HSLV_BURP0 RecName: Full=ATP-dependent protease subunit HslV
gi|52208260|emb|CAH34191.1| ATP-dependent Hsl protease [Burkholderia pseudomallei K96243]
gi|52427876|gb|AAU48469.1| protease HslVU, subunit HslV [Burkholderia mallei ATCC 23344]
gi|148028877|gb|EDK86809.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia mallei 2002721280]
gi|157806143|gb|EDO83313.1| protease HslVU, subunit HslV [Burkholderia pseudomallei 406e]
gi|169652918|gb|EDS85611.1| protease HslVU, subunit HslV [Burkholderia pseudomallei S13]
gi|210148305|gb|ABN89094.2| shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia pseudomallei 1106a]
gi|242137594|gb|EES23996.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
pseudomallei 1106b]
gi|243062874|gb|EES45060.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
mallei PRL-20]
gi|254216769|gb|EET06153.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
pseudomallei 1710a]
gi|283775070|gb|ABN81994.2| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
pseudomallei 668]
Length = 178
Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats.
Identities = 103/176 (58%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTILSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRLLRRLEAMLIAADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T S EI KA+ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKALGIAGDMCIYTNHNRIIETIE 178
>gi|253573513|ref|ZP_04850856.1| 20S proteasome A and B [Paenibacillus sp. oral taxon 786 str. D14]
gi|251847041|gb|EES75046.1| 20S proteasome A and B [Paenibacillus sp. oral taxon 786 str. D14]
Length = 180
Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats.
Identities = 99/178 (55%), Positives = 137/178 (76%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ HATTI VR +G IAGDGQV+ G VMK A+KVRRL +G ++AGFAGS ADA
Sbjct: 3 LSFHATTICAVRHNGKGAIAGDGQVTFGQNVVMKQTAKKVRRLYRGQVVAGFAGSVADAI 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE++ L R++VELAKDWR D+ LR LEA++++ DKT L+I+G G+++E
Sbjct: 63 TLFEKFEGKLEEHSGNLQRAAVELAKDWRQDRVLRKLEALMIVMDKTGMLLISGGGEIIE 122
Query: 130 PENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ V+AIGSGG++ALSAARAL +T A++IAR+++ IA++ICVYTN+NI++E L
Sbjct: 123 PDDDVLAIGSGGNFALSAARALKRHATGLEAKDIARESLQIASEICVYTNNNIIVEEL 180
>gi|83589877|ref|YP_429886.1| ATP-dependent protease peptidase subunit [Moorella thermoacetica
ATCC 39073]
gi|123524655|sp|Q2RJP6|HSLV_MOOTA RecName: Full=ATP-dependent protease subunit HslV
gi|83572791|gb|ABC19343.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Moorella thermoacetica ATCC 39073]
Length = 174
Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats.
Identities = 95/174 (54%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M TT++ VR G V +AGDGQV+ G TVMK ARKVRRL + ++AGFAGS ADAFTL
Sbjct: 1 MEGTTVIAVRHQGRVALAGDGQVTFGNTVMKHKARKVRRLYQDRVLAGFAGSVADAFTLF 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E KLE Y L R++VEL K+WR D++LR LEA++++ADK L+I+G G+++EP++
Sbjct: 61 EKFEAKLETYHGNLQRAAVELGKEWRTDRFLRRLEALLVVADKEHLLIISGNGEIVEPDD 120
Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ AIGSGG Y +A + T +A EIAR+AM+IAA IC+YTN+NI++E L
Sbjct: 121 GIAAIGSGGPYALAAARALVAHTSMTAGEIAREAMNIAASICIYTNNNIIVEEL 174
>gi|254452129|ref|ZP_05065566.1| ATP-dependent protease HslV [Octadecabacter antarcticus 238]
gi|198266535|gb|EDY90805.1| ATP-dependent protease HslV [Octadecabacter antarcticus 238]
Length = 186
Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats.
Identities = 123/185 (66%), Positives = 146/185 (78%), Gaps = 3/185 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
M + H TTI+ VRK G VVIAGDGQVS+GQTVMK ARKVRRL G ++I GF
Sbjct: 1 MTKDTFP-GWHGTTIIGVRKGGEVVIAGDGQVSVGQTVMKGTARKVRRLTAGGSDVICGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLEKKLE P QL R+SVELAK+WR DKYL+ LEAM++++D LVI
Sbjct: 60 AGSTADAFTLLERLEKKLEATPGQLARASVELAKEWRTDKYLQKLEAMLIVSDGKDLLVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE V AIGSGG++AL+A RALM + SAEEIAR+AM+IA+DICVYTN N+
Sbjct: 120 TGAGDVLEPEYDVTAIGSGGNFALAAGRALMDLEFSAEEIARRAMAIASDICVYTNGNLT 179
Query: 182 LETLK 186
+ET+K
Sbjct: 180 VETIK 184
>gi|110677842|ref|YP_680849.1| ATP-dependent protease peptidase subunit [Roseobacter denitrificans
OCh 114]
gi|123065963|sp|Q16CY0|HSLV_ROSDO RecName: Full=ATP-dependent protease subunit HslV
gi|109453958|gb|ABG30163.1| ATP-dependent protease hslV [Roseobacter denitrificans OCh 114]
Length = 185
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 120/186 (64%), Positives = 144/186 (77%), Gaps = 3/186 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M + H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G +++AGF
Sbjct: 1 MARDEFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM++++D VI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGKDIFVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG+YAL+AAR +M + SAEE+AR AM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNYALAAARGMMDSPRSAEEVARDAMAIAADICVYTNGNLT 179
Query: 182 LETLKV 187
+ET+
Sbjct: 180 VETISA 185
>gi|126176058|ref|YP_001052207.1| ATP-dependent protease peptidase subunit [Shewanella baltica OS155]
gi|160873587|ref|YP_001552903.1| ATP-dependent protease peptidase subunit [Shewanella baltica OS195]
gi|217971679|ref|YP_002356430.1| ATP-dependent protease peptidase subunit [Shewanella baltica OS223]
gi|304411508|ref|ZP_07393121.1| 20S proteasome A and B subunits [Shewanella baltica OS183]
gi|307306716|ref|ZP_07586458.1| 20S proteasome A and B subunits [Shewanella baltica BA175]
gi|166222998|sp|A3D9C5|HSLV_SHEB5 RecName: Full=ATP-dependent protease subunit HslV
gi|189036237|sp|A9KYP9|HSLV_SHEB9 RecName: Full=ATP-dependent protease subunit HslV
gi|254802423|sp|B8E6E4|HSLV_SHEB2 RecName: Full=ATP-dependent protease subunit HslV
gi|125999263|gb|ABN63338.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella baltica OS155]
gi|160859109|gb|ABX47643.1| 20S proteasome A and B subunits [Shewanella baltica OS195]
gi|217496814|gb|ACK45007.1| 20S proteasome A and B subunits [Shewanella baltica OS223]
gi|304350035|gb|EFM14440.1| 20S proteasome A and B subunits [Shewanella baltica OS183]
gi|306910684|gb|EFN41113.1| 20S proteasome A and B subunits [Shewanella baltica BA175]
gi|315265815|gb|ADT92668.1| 20S proteasome A and B subunits [Shewanella baltica OS678]
Length = 174
Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + LLRS+VELAKDWR D+ LR LEA++++AD +L+ITG GDV++PE+ ++
Sbjct: 62 EAKLEMHQGHLLRSAVELAKDWRTDRMLRKLEALLVVADAETSLIITGNGDVVQPEHDLV 121
Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+Y +A L +T+ SA EIA K+++IAADICV+TN +E L
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAADICVFTNQFKTIEEL 172
>gi|325272526|ref|ZP_08138898.1| ATP-dependent protease subunit HslV [Pseudomonas sp. TJI-51]
gi|324102336|gb|EGB99810.1| ATP-dependent protease subunit HslV [Pseudomonas sp. TJI-51]
Length = 176
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 104/175 (59%), Positives = 141/175 (80%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EGQLEKHQGHLIRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+GSGG+YA +AARAL++ T SA EIA A++IA DICV+TNHN+ +E + D
Sbjct: 122 AMGSGGAYAQAAARALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAD 176
>gi|238028911|ref|YP_002913142.1| ATP-dependent protease peptidase subunit [Burkholderia glumae BGR1]
gi|237878105|gb|ACR30438.1| 20S proteasome, A and B subunits [Burkholderia glumae BGR1]
Length = 178
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 103/176 (58%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QYHGTTIVSVRRGDQVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ ADKT TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADKTTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T+ S +EI KA++IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGSYAQAAARALAENTELSPQEIVAKALTIAGDMCIYTNHNHIIETIE 178
>gi|213969434|ref|ZP_03397571.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
tomato T1]
gi|213925805|gb|EEB59363.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
tomato T1]
Length = 192
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 101/175 (57%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 18 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 77
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 78 EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 137
Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E + D
Sbjct: 138 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEEQDLAD 192
>gi|209521636|ref|ZP_03270331.1| 20S proteasome A and B subunits [Burkholderia sp. H160]
gi|209497938|gb|EDZ98098.1| 20S proteasome A and B subunits [Burkholderia sp. H160]
Length = 178
Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats.
Identities = 99/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGNKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AA+AL +T+ S +I K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALSDNTELSPRDIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|52080217|ref|YP_079008.1| ATP-dependent protease peptidase subunit [Bacillus licheniformis
ATCC 14580]
gi|52785594|ref|YP_091423.1| ATP-dependent protease peptidase subunit [Bacillus licheniformis
ATCC 14580]
gi|319646004|ref|ZP_08000234.1| ATP-dependent protease hslV [Bacillus sp. BT1B_CT2]
gi|81609172|sp|Q65JN4|CLPQ_BACLD RecName: Full=ATP-dependent protease subunit ClpQ
gi|52003428|gb|AAU23370.1| two-component ATP-dependent protease (N-terminal serine protease)
[Bacillus licheniformis ATCC 14580]
gi|52348096|gb|AAU40730.1| ClpQ [Bacillus licheniformis ATCC 14580]
gi|317391754|gb|EFV72551.1| ATP-dependent protease hslV [Bacillus sp. BT1B_CT2]
Length = 181
Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats.
Identities = 96/178 (53%), Positives = 128/178 (71%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ +G +AGDGQV+ GQ VMK ARKVR+L G +IAGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHNGKSAMAGDGQVTFGQAVVMKHTARKVRKLFNGKVIAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VELAK+WR DK LR LEAM+++ + L+++G G+V+EP+
Sbjct: 64 FEMFEAKLEEYNGNLQRAAVELAKEWRSDKVLRKLEAMLIVMNADSMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG+YAL+A RAL Q A+ IAR ++ A +ICVYTN I++E L+
Sbjct: 124 DGILAIGSGGNYALAAGRALKRHAGSQLDAKAIARASLETAGEICVYTNDQIIVEELE 181
>gi|83942013|ref|ZP_00954475.1| ATP-dependent protease hslV [Sulfitobacter sp. EE-36]
gi|83953062|ref|ZP_00961784.1| ATP-dependent protease hslV [Sulfitobacter sp. NAS-14.1]
gi|83842030|gb|EAP81198.1| ATP-dependent protease hslV [Sulfitobacter sp. NAS-14.1]
gi|83847833|gb|EAP85708.1| ATP-dependent protease hslV [Sulfitobacter sp. EE-36]
Length = 185
Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats.
Identities = 118/184 (64%), Positives = 143/184 (77%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M + + H TTI+ V+KDG VVIAGDGQVSLGQTV+K ARKVRRL G +++AGF
Sbjct: 1 MSKQEFP-GWHGTTIIGVKKDGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM++++D LVI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGRELLVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG+YAL+AAR +M + AE +AR AM IA+DICVYTN N+
Sbjct: 120 TGAGDVLEPEHSVAAIGSGGNYALAAARGMMDSDRDAETVARDAMKIASDICVYTNGNLT 179
Query: 182 LETL 185
+E +
Sbjct: 180 VEKI 183
>gi|251797451|ref|YP_003012182.1| ATP-dependent protease peptidase subunit [Paenibacillus sp. JDR-2]
gi|247545077|gb|ACT02096.1| 20S proteasome A and B subunits [Paenibacillus sp. JDR-2]
Length = 181
Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats.
Identities = 101/179 (56%), Positives = 136/179 (75%), Gaps = 3/179 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADA 68
++ HATTI VR +G IAGDGQV+ G +V MK A+KVRRL +G +IAGFAGS ADA
Sbjct: 2 DMEFHATTICAVRHEGKGAIAGDGQVTFGNSVVMKNKAKKVRRLYRGQVIAGFAGSVADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
TL E+ E KLE++ L R++VELAKDWR D+ LR LEA++L+ D++ L+I+G G+++
Sbjct: 62 ITLFEKFEAKLEEHHGNLQRAAVELAKDWRTDRILRKLEALMLVMDQSGLLLISGNGEII 121
Query: 129 EPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EP++G++AIGSGG+YALSAARAL A++IAR A+ AADICVYTNHNI++E +
Sbjct: 122 EPDDGILAIGSGGNYALSAARALQKHAPHMEAKDIARAALETAADICVYTNHNIIVEEI 180
>gi|146291636|ref|YP_001182060.1| ATP-dependent protease peptidase subunit [Shewanella putrefaciens
CN-32]
gi|152998997|ref|YP_001364678.1| ATP-dependent protease peptidase subunit [Shewanella baltica OS185]
gi|166222999|sp|A6WIH6|HSLV_SHEB8 RecName: Full=ATP-dependent protease subunit HslV
gi|166223001|sp|A4Y2S8|HSLV_SHEPC RecName: Full=ATP-dependent protease subunit HslV
gi|145563326|gb|ABP74261.1| 20S proteasome, A and B subunits [Shewanella putrefaciens CN-32]
gi|151363615|gb|ABS06615.1| 20S proteasome A and B subunits [Shewanella baltica OS185]
Length = 174
Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 130/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NA+KVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + LLRS+VELAKDWR D+ LR LEAM+++AD +L+ITG GDV++PE ++
Sbjct: 62 EAKLEMHQGHLLRSAVELAKDWRTDRMLRKLEAMLVVADAEASLIITGNGDVVQPEYDLV 121
Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+Y +A L +T+ SA EIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAGDICVFTNQFKTIEEL 172
>gi|222112160|ref|YP_002554424.1| ATP-dependent protease peptidase subunit [Acidovorax ebreus TPSY]
gi|254802411|sp|B9MFS3|HSLV_ACIET RecName: Full=ATP-dependent protease subunit HslV
gi|221731604|gb|ACM34424.1| 20S proteasome A and B subunits [Acidovorax ebreus TPSY]
Length = 181
Score = 281 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 98/179 (54%), Positives = 135/179 (75%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTIL+VR+ V + GDGQV+LG V+K ARKVR+L +G ++AGFAG++AD
Sbjct: 3 QYHGTTILSVRRQTADGIQVALGGDGQVTLGNIVVKGTARKVRKLYQGRVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ QL R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGQLTRAAIELTKDWRTDRVLRRLEAMLAVADHSASLIITGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE G++AIGSGG+YA SAA+AL+ +T A EI +K++ IA ++C+YTN + +ETL
Sbjct: 123 LEPEQGIVAIGSGGAYAHSAAKALLSNTDLPAAEIVKKSLEIAGELCIYTNMHHTIETL 181
>gi|56419748|ref|YP_147066.1| ATP-dependent protease peptidase subunit [Geobacillus kaustophilus
HTA426]
gi|261419413|ref|YP_003253095.1| ATP-dependent protease peptidase subunit [Geobacillus sp. Y412MC61]
gi|297530612|ref|YP_003671887.1| 20S proteasome A and subunit betas [Geobacillus sp. C56-T3]
gi|319766228|ref|YP_004131729.1| 20S proteasome A and B subunits [Geobacillus sp. Y412MC52]
gi|81347625|sp|Q5L0N2|HSLV_GEOKA RecName: Full=ATP-dependent protease subunit HslV
gi|56379590|dbj|BAD75498.1| proteasome Clp protease subunit [Geobacillus kaustophilus HTA426]
gi|261375870|gb|ACX78613.1| 20S proteasome A and B subunits [Geobacillus sp. Y412MC61]
gi|297253864|gb|ADI27310.1| 20S proteasome A and B subunits [Geobacillus sp. C56-T3]
gi|317111094|gb|ADU93586.1| 20S proteasome A and B subunits [Geobacillus sp. Y412MC52]
Length = 180
Score = 281 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 100/177 (56%), Positives = 132/177 (74%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI +R +G +AGDGQV+ G VMK A+KVRRL +GN++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAIRHNGASAMAGDGQVTFGNAVVMKHTAKKVRRLFQGNVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLEQ+ L R++VELAK+WR DK LR LEAM+++ DK L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEQWNGNLPRAAVELAKEWRSDKVLRRLEAMLIVMDKQHLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG YAL+A RAL +A+EIA+ A+ IAADICVYTN +I++E L
Sbjct: 124 DGMLAIGSGGQYALAAGRALKKYAGGSMTAKEIAKAALEIAADICVYTNGHIIVEEL 180
>gi|291533223|emb|CBL06336.1| ATP dependent peptidase CodWX, CodW component. Threonine peptidase.
MEROPS family T01B [Megamonas hypermegale ART12/1]
Length = 180
Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats.
Identities = 106/176 (60%), Positives = 134/176 (76%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
ATTI+ V+KDG IAGDGQV+ GQ +MKANARKVRRL G ++AGFAGS ADAFTL
Sbjct: 4 FKATTIIAVKKDGKTAIAGDGQVTFGQAAIMKANARKVRRLYNGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL +Y L R++VELAKDWR D+ LR LEA++L+AD+ L+++G G+V+EP+
Sbjct: 64 FEKFESKLIEYHGNLTRAAVELAKDWRTDRVLRKLEALLLVADENTMLLLSGNGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
V AIGSGG YALSA RAL +A EIA++A++IAADICVYTNHNI++E L
Sbjct: 124 GNVAAIGSGGFYALSAGRALAKHSNLTAAEIAKEALTIAADICVYTNHNIIVEELD 179
>gi|323701842|ref|ZP_08113512.1| 20S proteasome, A and B subunits [Desulfotomaculum nigrificans DSM
574]
gi|323533146|gb|EGB23015.1| 20S proteasome, A and B subunits [Desulfotomaculum nigrificans DSM
574]
Length = 176
Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats.
Identities = 106/175 (60%), Positives = 139/175 (79%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V++ V +AGDGQV+ G T+MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 2 FHATTIVAVKRGNKVAVAGDGQVTFGQNTIMKHTARKVRRLHQGQVLAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE++ L+R++VELAKDWR DKYLR LEAM+++A+K LV++G G+V+EP+
Sbjct: 62 FEKFEGKLEEFHGNLMRAAVELAKDWRTDKYLRALEAMLIVANKENLLVLSGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV AIGSGG YAL+AARAL+ T+ S E+AR+A+ +AADICVYTNHNIV+E +
Sbjct: 122 EGVTAIGSGGPYALAAARALLKHTEMSPAEVAREALGLAADICVYTNHNIVVEEI 176
>gi|228992558|ref|ZP_04152485.1| ATP-dependent protease hslV [Bacillus pseudomycoides DSM 12442]
gi|228998606|ref|ZP_04158193.1| ATP-dependent protease hslV [Bacillus mycoides Rock3-17]
gi|229006106|ref|ZP_04163794.1| ATP-dependent protease hslV [Bacillus mycoides Rock1-4]
gi|228755182|gb|EEM04539.1| ATP-dependent protease hslV [Bacillus mycoides Rock1-4]
gi|228761074|gb|EEM10033.1| ATP-dependent protease hslV [Bacillus mycoides Rock3-17]
gi|228767192|gb|EEM15828.1| ATP-dependent protease hslV [Bacillus pseudomycoides DSM 12442]
Length = 180
Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats.
Identities = 96/177 (54%), Positives = 129/177 (72%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI + +G +AGDGQV+ G VMK ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAIHHNGECAMAGDGQVTFGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R++VE+AK WR DK LR LEAM+++ D+T L+++G G+V+EP+
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDQTTLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG YAL+A RAL +A+ IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGHYALAAGRALKQHASEHLTAKAIAKASLEIAGDICVYTNHNIIVEEL 180
>gi|163803565|ref|ZP_02197433.1| ATP-dependent protease peptidase subunit [Vibrio sp. AND4]
gi|159172652|gb|EDP57508.1| ATP-dependent protease peptidase subunit [Vibrio sp. AND4]
Length = 183
Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats.
Identities = 102/172 (59%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG+YA +AA AL+ +T+ A +IA KA++IA DICV+TNH +E L+
Sbjct: 122 AIGSGGAYAQAAATALLENTELDARKIAEKALNIAGDICVFTNHQHTVEELE 173
>gi|126738521|ref|ZP_01754226.1| ATP-dependent protease peptidase subunit [Roseobacter sp.
SK209-2-6]
gi|126720320|gb|EBA17026.1| ATP-dependent protease peptidase subunit [Roseobacter sp.
SK209-2-6]
Length = 187
Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats.
Identities = 118/184 (64%), Positives = 145/184 (78%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D + H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G +++ GF
Sbjct: 1 MADDQFP-GWHGTTIIGVKKGGQVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVVGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM++++D T LVI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGTELLVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR +M + +AE++AR AM+IAADICVYTN +
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARGMMDSDRNAEQVARDAMAIAADICVYTNGRLT 179
Query: 182 LETL 185
+ET+
Sbjct: 180 VETI 183
>gi|311068136|ref|YP_003973059.1| ATP-dependent protease peptidase subunit [Bacillus atrophaeus 1942]
gi|310868653|gb|ADP32128.1| ATP-dependent protease peptidase subunit [Bacillus atrophaeus 1942]
Length = 181
Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats.
Identities = 97/178 (54%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ +G ++GDGQV+ GQ VMK ARKVR+L G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHNGKSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R+SVELAK+WR DK LR LEAM+++ ++ L+++G G+V+EP+
Sbjct: 64 FEMFEAKLEEYNGNLKRASVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG+YAL+A RAL SA EIA+ A+ A +ICVYTN I+LE L+
Sbjct: 124 DGILAIGSGGNYALAAGRALKKHAGESLSAREIAQAALETAGEICVYTNDQIILEELE 181
>gi|332288324|ref|YP_004419176.1| ATP-dependent protease peptidase subunit [Gallibacterium anatis
UMN179]
gi|330431220|gb|AEC16279.1| ATP-dependent protease peptidase subunit [Gallibacterium anatis
UMN179]
Length = 174
Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats.
Identities = 97/172 (56%), Positives = 129/172 (75%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVVGGDGQVSLGNTVMKGNARKVRRLYGDKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-V 134
E+KLE + LL+S+VELAK+WR D+ LR LEAM+++AD +L+ITG+GDV++PE +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKEWRTDRALRKLEAMLIVADAKESLIITGLGDVVQPEEDQI 121
Query: 135 MAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+Y +A + +T SA EI K++ IA DICV+TN N +E L
Sbjct: 122 LAIGSGGNYAMAAARALVANTDLSAREIVEKSLKIAGDICVFTNTNFTIEEL 173
>gi|169757653|gb|ACA70969.1| 20S proteasome A and B subunits [Pseudomonas putida W619]
Length = 192
Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats.
Identities = 102/175 (58%), Positives = 140/175 (80%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 18 TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYNGEVIAGFAGATADAFTLFERF 77
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +L+++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 78 EAQLQKHSGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 137
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+GSGG+YA +AARAL++ T SA EIA A++IA DICV+TNHN+ +E + +
Sbjct: 138 AMGSGGAYAQAAARALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAE 192
>gi|319764383|ref|YP_004128320.1| 20S proteasome a and b subunits [Alicycliphilus denitrificans BC]
gi|330826602|ref|YP_004389905.1| ATP-dependent protease HslVU, peptidase subunit [Alicycliphilus
denitrificans K601]
gi|317118944|gb|ADV01433.1| 20S proteasome A and B subunits [Alicycliphilus denitrificans BC]
gi|329311974|gb|AEB86389.1| ATP-dependent protease HslVU, peptidase subunit [Alicycliphilus
denitrificans K601]
Length = 181
Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats.
Identities = 97/179 (54%), Positives = 134/179 (74%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTIL+VR+ V + GDGQV+LG V+K ARKVR+L +G ++AGFAG++AD
Sbjct: 3 QYHGTTILSVRRKTAHGIQVALGGDGQVTLGNIVVKGTARKVRKLYQGRVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ L R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADHSASLIITGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPE G++AIGSGG+YA SAA+AL+ T+ A EI +K++ IA ++C+YTN + +ETL
Sbjct: 123 LEPEEGIVAIGSGGAYAHSAAKALLHNTELPAVEIVKKSLEIAGELCIYTNMHHTIETL 181
>gi|24215046|ref|NP_712527.1| ATP-dependent protease peptidase subunit [Leptospira interrogans
serovar Lai str. 56601]
gi|45657472|ref|YP_001558.1| ATP-dependent protease peptidase subunit [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|47605706|sp|Q8F3Q4|HSLV_LEPIN RecName: Full=ATP-dependent protease subunit HslV
gi|85542203|sp|Q72RY8|HSLV_LEPIC RecName: Full=ATP-dependent protease subunit HslV
gi|24196096|gb|AAN49545.1| ATP-dependent protease peptidase subunit [Leptospira interrogans
serovar Lai str. 56601]
gi|45600711|gb|AAS70195.1| ATP-dependent HslUV protease peptidase subunit [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 180
Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats.
Identities = 101/175 (57%), Positives = 136/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TTIL VRK+G V I GDGQVS+G TVMK A+K+RRL G I++GFAGS+ADAFTL
Sbjct: 5 KIRSTTILCVRKNGKVAIGGDGQVSMGNTVMKNTAKKIRRLYDGKILSGFAGSAADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E EKK++++ L RS+VELA++WR D+ LR LEA++++ADK + +I+G GDV+ P+
Sbjct: 65 FELFEKKVQEFGGSLSRSAVELAREWRTDRMLRRLEALLIVADKEESFLISGTGDVISPD 124
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV+AIGSGG+YAL+AARAL T S +EI +M IAADIC+YTN++I LE +
Sbjct: 125 EGVIAIGSGGNYALAAARALYDHTNLSPKEIVESSMKIAADICIYTNNHITLEEI 179
>gi|312898771|ref|ZP_07758160.1| ATP-dependent protease HslVU, peptidase subunit [Megasphaera
micronuciformis F0359]
gi|310620202|gb|EFQ03773.1| ATP-dependent protease HslVU, peptidase subunit [Megasphaera
micronuciformis F0359]
Length = 179
Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats.
Identities = 101/175 (57%), Positives = 135/175 (77%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V KDG IAGDGQV++G +V MK A+KVRRL G +++GFAGS ADAF+L
Sbjct: 5 FHATTIVAVSKDGKTAIAGDGQVTMGNSVIMKGTAQKVRRLYNGKVVSGFAGSVADAFSL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+R E KL +Y L+RS+VELAKDWR DK L LEA++L++D L+++G G+V+EP+
Sbjct: 65 FDRFEAKLNEYNGNLIRSAVELAKDWRSDKVLHKLEALLLVSDGERILMLSGTGEVIEPD 124
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG YAL+AARAL +T +A+EIA K++ IAADICVYTNHN++ E +
Sbjct: 125 DGISAIGSGGMYALAAARALKDNTDLTAKEIAEKSLHIAADICVYTNHNVICEEI 179
>gi|23010577|ref|ZP_00051217.1| COG5405: ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 176
Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats.
Identities = 122/176 (69%), Positives = 144/176 (81%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG++I GFAG++ADAFTL
Sbjct: 1 MHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGSVIGGFAGATADAFTLF 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+AD+ ++L+++G GDVLEPE
Sbjct: 61 ERLEGKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADREVSLLLSGSGDVLEPET 120
Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
GVMAIGSGG+YAL+AARAL AE I R+AM IAADICVYTN ++V+E L
Sbjct: 121 GVMAIGSGGNYALAAARALEEGDLDAEAIVRRAMKIAADICVYTNGSLVIEALDAA 176
>gi|114769761|ref|ZP_01447371.1| ATP-dependent protease peptidase subunit [alpha proteobacterium
HTCC2255]
gi|114549466|gb|EAU52348.1| ATP-dependent protease peptidase subunit [alpha proteobacterium
HTCC2255]
gi|161170257|gb|ABX59227.1| ATP-dependent protease HslVU ClpYQ peptidase subunit [uncultured
marine bacterium EB000_55B11]
gi|297183786|gb|ADI19909.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 221
Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats.
Identities = 109/186 (58%), Positives = 145/186 (77%), Gaps = 3/186 (1%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAG 60
+M + H TTI+ V+K VVIAGDGQVSLG TV+K +A+KVRR+ G ++I G
Sbjct: 36 IMEQSKFP-GWHGTTIIGVKKGDDVVIAGDGQVSLGNTVIKGSAKKVRRISPGGHDVICG 94
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
FAGS+ADAFTLLERLE KLE P QL ++S+ LAKDWRMDKYL+NLEAM+++ D + V
Sbjct: 95 FAGSTADAFTLLERLEAKLEASPGQLAKASISLAKDWRMDKYLKNLEAMLIVTDGSDIFV 154
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
ITG GDVLEPE+G+ AIGSGG++AL+AARAL+ ++ AE IA+K+++IAA+ICV+TN N+
Sbjct: 155 ITGAGDVLEPEHGIAAIGSGGNFALAAARALIDSEQDAEAIAKKSLTIAAEICVFTNGNM 214
Query: 181 VLETLK 186
+E +
Sbjct: 215 TVEKIS 220
>gi|315186394|gb|EFU20154.1| 20S proteasome A and B subunits [Spirochaeta thermophila DSM 6578]
Length = 178
Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats.
Identities = 97/176 (55%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT++ VR++GVV +AGDGQV++G T+MK NARKVR L G ++ GFAG++ADAFTL
Sbjct: 3 EVKSTTVIAVRRNGVVAMAGDGQVTMGTTIMKGNARKVRTLYDGRVLVGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+++ +LRS+V LAKDWR D+ LR LEA++L+AD+ L+++G GDV+EPE
Sbjct: 63 FERFEGKLKEFSGDVLRSAVALAKDWRTDRMLRRLEALLLVADRERMLLLSGTGDVVEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+GV+AIGSGG YA +AA+AL+ T SA IA +++ IAA IC+YTN I++E L
Sbjct: 123 DGVLAIGSGGPYAHAAAKALLSHTDLSARRIAEESLRIAASICIYTNEQIIVEELS 178
>gi|222099124|ref|YP_002533692.1| ATP-dependent protease hslV [Thermotoga neapolitana DSM 4359]
gi|221571514|gb|ACM22326.1| ATP-dependent protease hslV [Thermotoga neapolitana DSM 4359]
Length = 179
Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats.
Identities = 94/176 (53%), Positives = 128/176 (72%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+K H TTIL VR+DG V+ GDGQV+ G TV+K NARKVR+LG+G ++AGFAGS ADA T
Sbjct: 4 MKFHGTTILVVRRDGKTVMGGDGQVTFGSTVLKGNARKVRKLGEGRVLAGFAGSVADAMT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L +R E KL ++ L +++VELAKDWR D+ LR LEA++L+AD+ +I+G G+V++P
Sbjct: 64 LFDRFEAKLREWGGNLTKAAVELAKDWRTDRILRRLEALLLVADRENIFIISGNGEVIQP 123
Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++ AIGSGG Y +A L +T SA EI KAM IA +IC+YTN N+V+E +
Sbjct: 124 DDDAAAIGSGGPYALAAAKALLRNTDLSAREIVEKAMMIAGEICIYTNQNLVIEEV 179
>gi|121533769|ref|ZP_01665596.1| transcriptional regulator, Fis family [Thermosinus carboxydivorans
Nor1]
gi|121307760|gb|EAX48675.1| transcriptional regulator, Fis family [Thermosinus carboxydivorans
Nor1]
Length = 176
Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats.
Identities = 104/175 (59%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ VR G IAGDGQV+ G TVMK NA+KVRRL G I+AGFAGS ADAFTL
Sbjct: 2 FHATTIVAVRHKGKTAIAGDGQVTFGGNTVMKHNAKKVRRLYHGKILAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ E KLE++ L+R++VELAK+WRMDK LR LEA++++ D L+I+G G+V+EP+
Sbjct: 62 FGKFESKLEEFNGNLMRAAVELAKEWRMDKVLRRLEALLIVCDAQSMLIISGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG YAL+AARAL SA EIAR+A+ IAA ICVYTN+ I +E L
Sbjct: 122 DGITAIGSGGPYALAAARALAKYSGLSAAEIAREALQIAASICVYTNNQITVEEL 176
>gi|91794709|ref|YP_564360.1| ATP-dependent protease peptidase subunit [Shewanella denitrificans
OS217]
gi|122968445|sp|Q12IT9|HSLV_SHEDO RecName: Full=ATP-dependent protease subunit HslV
gi|91716711|gb|ABE56637.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Shewanella denitrificans OS217]
Length = 174
Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats.
Identities = 102/172 (59%), Positives = 132/172 (76%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + LL+S+VELAKDWR DK LR LEAM+++AD +L+ITG GDV++PE+ ++
Sbjct: 62 EAKLEMHQGHLLKSAVELAKDWRTDKMLRKLEAMLVVADTEASLIITGNGDVVQPEHDLI 121
Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG+Y +A L +T+ SA+EIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSAQEIADKSLTIAGDICVFTNQFKTIEQLD 173
>gi|212639573|ref|YP_002316093.1| ATP-dependent protease peptidase subunit [Anoxybacillus
flavithermus WK1]
gi|254802328|sp|B7GGC6|HSLV_ANOFW RecName: Full=ATP-dependent protease subunit HslV
gi|212561053|gb|ACJ34108.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Anoxybacillus flavithermus WK1]
Length = 182
Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats.
Identities = 96/181 (53%), Positives = 133/181 (73%), Gaps = 4/181 (2%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ + HATTI +R G +AGDGQV+ G VMK ARK+R+L GN++AGFAG+ AD
Sbjct: 2 FMSQFHATTIFAIRHQGKGAMAGDGQVTFGNAVVMKHTARKIRKLFHGNVLAGFAGAVAD 61
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL E E KLE+Y L R++VELAK+WR DK LR LEAM+++ D T L+I+G G+V
Sbjct: 62 AFTLFEMFEGKLEEYNGNLQRAAVELAKEWRSDKVLRRLEAMLIVMDATHLLLISGTGEV 121
Query: 128 LEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLET 184
+EP++G++AIGSGG+YAL+A RAL + +A++IA+ A+ +A+DICVYTN I++E
Sbjct: 122 IEPDDGILAIGSGGNYALAAGRALKAYAGEHLTAKQIAQAALKVASDICVYTNDCIIVEE 181
Query: 185 L 185
L
Sbjct: 182 L 182
>gi|254486874|ref|ZP_05100079.1| ATP-dependent protease HslV [Roseobacter sp. GAI101]
gi|214043743|gb|EEB84381.1| ATP-dependent protease HslV [Roseobacter sp. GAI101]
Length = 185
Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats.
Identities = 121/185 (65%), Positives = 143/185 (77%), Gaps = 3/185 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M K + H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G +++AGF
Sbjct: 1 MSSKEFP-GWHGTTIIGVKKAGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D LVI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGVELLVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG+YAL+AAR +M ++ AE IAR AM IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNYALAAARGMMDSERDAETIARDAMKIAADICVYTNGNLT 179
Query: 182 LETLK 186
+E +K
Sbjct: 180 VEKIK 184
>gi|149912867|ref|ZP_01901401.1| 20S proteasome, A and B subunits [Roseobacter sp. AzwK-3b]
gi|149813273|gb|EDM73099.1| 20S proteasome, A and B subunits [Roseobacter sp. AzwK-3b]
Length = 184
Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats.
Identities = 114/178 (64%), Positives = 139/178 (78%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADA 68
H TTI+ V+K G VV+AGDGQVSLG TV+K +ARKVRRL G +++AGFAGS+ADA
Sbjct: 6 PGWHGTTIIGVKKAGTVVVAGDGQVSLGDTVIKGSARKVRRLSPGGYDVVAGFAGSTADA 65
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTLLERLE KLE P QL R+ V LAKDWR DKYL+ LEAM+++ D VITG GDVL
Sbjct: 66 FTLLERLESKLESTPGQLQRACVALAKDWRTDKYLQKLEAMLIVTDGDQIYVITGAGDVL 125
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
EPE+ V AIGSGG+YAL+AAR +M + SAE+IAR AM+IAADICVYTN N+ +E++
Sbjct: 126 EPEHDVTAIGSGGNYALAAARGMMDSDRSAEQIARDAMAIAADICVYTNGNLTVESIS 183
>gi|92112733|ref|YP_572661.1| ATP-dependent protease peptidase subunit [Chromohalobacter
salexigens DSM 3043]
gi|91795823|gb|ABE57962.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Chromohalobacter salexigens DSM 3043]
Length = 172
Score = 280 bits (718), Expect = 6e-74, Method: Composition-based stats.
Identities = 98/171 (57%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ V +AGDGQVSLG TVMK NA KVRR+ G ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGENVALAGDGQVSLGNTVMKGNASKVRRIHHGKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +L++Y L++++VEL+K+WR D+ LR LEAM+ +ADK +L++TG GDV+EPE G++
Sbjct: 62 EAQLDKYQGHLVKAAVELSKEWRTDRALRRLEAMLAVADKNASLILTGNGDVVEPERGII 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA ++ARAL+ +T A I K++ IA DICV+TNH+I LE L
Sbjct: 122 AIGSGGHYAQASARALLENTDLDARTITEKSLEIAGDICVFTNHHITLEEL 172
>gi|119943798|ref|YP_941478.1| ATP-dependent protease peptidase subunit [Psychromonas ingrahamii
37]
gi|166222991|sp|A1SQW4|HSLV_PSYIN RecName: Full=ATP-dependent protease subunit HslV
gi|119862402|gb|ABM01879.1| 20S proteasome, A and B subunits [Psychromonas ingrahamii 37]
Length = 184
Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 128/176 (72%), Gaps = 1/176 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VV+ GDGQVSLG TVMK NARKV RL +IAGFAG +ADAFTLLER
Sbjct: 2 TTIVSVRRGNQVVVGGDGQVSLGNTVMKGNARKVHRLYNNQVIAGFAGGTADAFTLLERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L R++VELAKDWR D+ LR LEA++ +ADK + +ITG GDV+ PEN +M
Sbjct: 62 EAKLQAHQGNLERAAVELAKDWRTDRSLRRLEALLAVADKNSSYIITGNGDVVRPENDLM 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AIGSGG +A SAA AL+ +T A+ I KA++IA +ICV+TN +E + DE
Sbjct: 122 AIGSGGYFAQSAAIALLENTDLDAKTIVEKALAIAGNICVFTNETHTIECIDFSDE 177
>gi|58584979|ref|YP_198552.1| ATP-dependent protease peptidase subunit [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|75497643|sp|Q5GRR4|HSLV_WOLTR RecName: Full=ATP-dependent protease subunit HslV
gi|58419295|gb|AAW71310.1| ATP-dependent protease HslV, peptidase subunit [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 176
Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats.
Identities = 118/175 (67%), Positives = 152/175 (86%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M+ TTIL++RKD V++ GDGQVSLG TV+K+ A+KVRRL ++IAGFAG++ADAFTL
Sbjct: 1 MYGTTILSIRKDKSVIVIGDGQVSLGHTVIKSGAKKVRRLSSDSVIAGFAGATADAFTLF 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KL+++P QL+R+ VELAKDWRMDKYLR LEAM+++ADK+I+LVITG GDVLEPE+
Sbjct: 61 ERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGDVLEPED 120
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG++ALSAA+AL+ + S EEIA+KAM IAADICVYTNHN+V+E ++
Sbjct: 121 GIAAIGSGGNFALSAAKALIDIKGISIEEIAKKAMKIAADICVYTNHNVVVEKIE 175
>gi|259417627|ref|ZP_05741546.1| ATP-dependent protease HslV [Silicibacter sp. TrichCH4B]
gi|259346533|gb|EEW58347.1| ATP-dependent protease HslV [Silicibacter sp. TrichCH4B]
Length = 185
Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats.
Identities = 114/185 (61%), Positives = 141/185 (76%), Gaps = 3/185 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M + + H TTI+ VRK VV+AGDGQVSLGQTV+K +ARKVRRL G +++AGF
Sbjct: 1 MAEDQFP-GWHGTTIIGVRKGDEVVVAGDGQVSLGQTVIKGSARKVRRLSPGGYDVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D VI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLQRASVELAKDWRTDKYLQKLEAMLIVTDGKELYVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR +M + AE +AR AM+IA+DICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARGMMDSDRDAETVARDAMAIASDICVYTNGNLT 179
Query: 182 LETLK 186
+E +
Sbjct: 180 VERIS 184
>gi|317484380|ref|ZP_07943299.1| proteasome A-type and B-type [Bilophila wadsworthia 3_1_6]
gi|316924388|gb|EFV45555.1| proteasome A-type and B-type [Bilophila wadsworthia 3_1_6]
Length = 177
Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats.
Identities = 101/177 (57%), Positives = 136/177 (76%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTIL VR G V + GDGQV++GQ+ VMK A+KVRR+ K I+AGFAG++ADAF
Sbjct: 1 MELRGTTILAVRHKGHVALIGDGQVTMGQSIVMKHTAKKVRRMYKDQIVAGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER + LEQ L+R++VELAKDWR DK+LR LEAM+L+AD+ TLV+TG GDV+E
Sbjct: 61 TLFERFDAHLEQTGGNLIRAAVELAKDWRSDKFLRKLEAMLLVADRDHTLVLTGTGDVIE 120
Query: 130 PENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G+ +IGSGG YALSAARAL + AE+IA ++M IA+++CV+TN + LE L
Sbjct: 121 PDDGIASIGSGGPYALSAARALVRHSDLGAEDIALESMKIASELCVFTNGHYTLEVL 177
>gi|213853084|ref|ZP_03382616.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. M223]
Length = 171
Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats.
Identities = 99/167 (59%), Positives = 130/167 (77%), Gaps = 1/167 (0%)
Query: 20 TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
+VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KL
Sbjct: 1 SVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKL 60
Query: 80 EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGS 139
E + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGS
Sbjct: 61 EMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGS 120
Query: 140 GGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GG YA +AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 GGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 167
>gi|206558902|ref|YP_002229662.1| ATP-dependent protease peptidase subunit [Burkholderia cenocepacia
J2315]
gi|238065815|sp|B4E7Z2|HSLV_BURCJ RecName: Full=ATP-dependent protease subunit HslV
gi|198034939|emb|CAR50811.1| ATP-dependent protease HslV [Burkholderia cenocepacia J2315]
Length = 178
Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL+ +T S EI K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALVENTDLSPREIVEKSLGIAGDMCIYTNHNRIIETIE 178
>gi|291286264|ref|YP_003503080.1| 20S proteasome A and B subunits [Denitrovibrio acetiphilus DSM
12809]
gi|290883424|gb|ADD67124.1| 20S proteasome A and B subunits [Denitrovibrio acetiphilus DSM
12809]
Length = 178
Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats.
Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 1/177 (0%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
M TT++ V+KDG I DGQV+ G TV+K NA+KVR++ ++ GFAGS+ADAF
Sbjct: 2 PDMMKGTTVVAVKKDGKTAIGADGQVTFGNTVLKHNAKKVRKVYNNKVVCGFAGSTADAF 61
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL+ER E KLEQ+ QLLR++VELAKDWR D+YLR LEAM+++AD ++TG GDV+E
Sbjct: 62 TLMERFEAKLEQHGGQLLRAAVELAKDWRTDRYLRKLEAMMIVADAEELYIMTGNGDVVE 121
Query: 130 PENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P+NGV AIGSGG YA +AA A+ +T+ S EI KA+ IAA+IC+YTN NI++E +
Sbjct: 122 PQNGVAAIGSGGPYAQAAAIAMAENTELSPSEIVDKALHIAANICIYTNDNIIVEEI 178
>gi|187922350|ref|YP_001893992.1| ATP-dependent protease peptidase subunit [Burkholderia phytofirmans
PsJN]
gi|238065844|sp|B2T1N9|HSLV_BURPP RecName: Full=ATP-dependent protease subunit HslV
gi|187713544|gb|ACD14768.1| 20S proteasome A and B subunits [Burkholderia phytofirmans PsJN]
Length = 178
Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats.
Identities = 95/176 (53%), Positives = 127/176 (72%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG +A +T+ S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAATALAHNTELSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|119385515|ref|YP_916571.1| ATP-dependent protease peptidase subunit [Paracoccus denitrificans
PD1222]
gi|189028453|sp|A1B5T1|HSLV_PARDP RecName: Full=ATP-dependent protease subunit HslV
gi|119375282|gb|ABL70875.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Paracoccus denitrificans PD1222]
Length = 184
Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats.
Identities = 119/184 (64%), Positives = 142/184 (77%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M + + H TTIL VR+ G VV+AGDGQVS+GQTVMK ARKVRRL G ++ GF
Sbjct: 1 MSEDKFP-GWHGTTILAVRRAGRVVVAGDGQVSVGQTVMKGTARKVRRLNPGGHEVVVGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLEKKLE P QL R+ V+LAKDWRMDKYLRNLEAM+++ D V+
Sbjct: 60 AGSTADAFTLLERLEKKLEAAPGQLARACVDLAKDWRMDKYLRNLEAMLIVTDGRDIFVV 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR LM + AE +ARKAM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARGLMESDLDAEAVARKAMAIAADICVYTNGNLT 179
Query: 182 LETL 185
+E L
Sbjct: 180 VEVL 183
>gi|254477320|ref|ZP_05090706.1| ATP-dependent protease HslV [Ruegeria sp. R11]
gi|214031563|gb|EEB72398.1| ATP-dependent protease HslV [Ruegeria sp. R11]
Length = 187
Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats.
Identities = 115/188 (61%), Positives = 141/188 (75%), Gaps = 3/188 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D + H TTI+ V+K VVIAGDGQVSLGQTV+K ARKVRRL G +++ GF
Sbjct: 1 MADDQFP-GWHGTTIIGVKKGDEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVVGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D + VI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGSDMFVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR +M + AE +AR AM+IAADICVYTN +
Sbjct: 120 TGAGDVLEPEHNVAAIGSGGNFALAAARGMMDSDRDAETVARDAMAIAADICVYTNGRLT 179
Query: 182 LETLKVGD 189
+E++ D
Sbjct: 180 VESISRKD 187
>gi|308173577|ref|YP_003920282.1| two-component ATP-dependent protease [Bacillus amyloliquefaciens
DSM 7]
gi|307606441|emb|CBI42812.1| two-component ATP-dependent protease (N-terminal serine protease)
[Bacillus amyloliquefaciens DSM 7]
gi|328553490|gb|AEB23982.1| ATP-dependent protease subunit HslV [Bacillus amyloliquefaciens
TA208]
gi|328911718|gb|AEB63314.1| two-component ATP-dependent protease (N-terminal serine protease)
[Bacillus amyloliquefaciens LL3]
Length = 181
Score = 280 bits (717), Expect = 8e-74, Method: Composition-based stats.
Identities = 99/178 (55%), Positives = 130/178 (73%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ G ++GDGQV+ GQ VMK ARKVR+L G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHKGKSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y L R+SVELAK+WR DK LR LEAM+++ ++ L+++G G+V+EP+
Sbjct: 64 FEMFEAKLEEYNGNLKRASVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G+MAIGSGG+YALSA RAL + SA++IA A+ IA +ICVYTN I+LE L+
Sbjct: 124 DGIMAIGSGGNYALSAGRALKTYAGENLSAKDIAHAALKIAGEICVYTNDQIILEELE 181
>gi|322434045|ref|YP_004216257.1| 20S proteasome A and B subunits [Acidobacterium sp. MP5ACTX9]
gi|321161772|gb|ADW67477.1| 20S proteasome A and B subunits [Acidobacterium sp. MP5ACTX9]
Length = 211
Score = 280 bits (716), Expect = 8e-74, Method: Composition-based stats.
Identities = 105/182 (57%), Positives = 138/182 (75%), Gaps = 6/182 (3%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT++ VR+ VV+A DGQVSLG TVMK++A+K+RRL ++AGFAGS+ADAF+L
Sbjct: 29 RIRSTTVICVRRGDSVVMAADGQVSLGGTVMKSSAKKIRRLYNDKVLAGFAGSTADAFSL 88
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
R E KLEQY L R++VELAKDWR DK LR LEA++++AD + TL+++G GDV+EP+
Sbjct: 89 FGRFEAKLEQYAGNLGRAAVELAKDWRTDKMLRQLEALLVVADASQTLMLSGTGDVIEPD 148
Query: 132 -----NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+MAIGSGGSYA +AA ALM +T+ SA EI KAM IAADIC+YTN I +E L
Sbjct: 149 AMRPGEGIMAIGSGGSYAQAAALALMENTEMSAREITEKAMKIAADICIYTNERITVEEL 208
Query: 186 KV 187
K
Sbjct: 209 KA 210
>gi|63254369|gb|AAY35465.1| 20S proteasome, A and B subunits [Pseudomonas syringae pv. syringae
B728a]
Length = 192
Score = 280 bits (716), Expect = 8e-74, Method: Composition-based stats.
Identities = 100/170 (58%), Positives = 131/170 (77%), Gaps = 1/170 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 18 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 77
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 78 EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 137
Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E
Sbjct: 138 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEE 187
>gi|299135731|ref|ZP_07028915.1| 20S proteasome A and B subunits [Acidobacterium sp. MP5ACTX8]
gi|298601855|gb|EFI58009.1| 20S proteasome A and B subunits [Acidobacterium sp. MP5ACTX8]
Length = 254
Score = 280 bits (716), Expect = 8e-74, Method: Composition-based stats.
Identities = 96/183 (52%), Positives = 138/183 (75%), Gaps = 5/183 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT++ VR+ +V+A DGQV+LG TVMK +A+K+RRL I+AGFAGS+ADAF+L
Sbjct: 72 RVRSTTVICVRRGDSMVMAADGQVTLGSTVMKHSAKKIRRLYNEKILAGFAGSTADAFSL 131
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
R E KLEQY L RS+VELAKDWR DK LR L+A++++AD +++G GDV+EP+
Sbjct: 132 FTRFEAKLEQYGGNLGRSAVELAKDWRTDKLLRQLQALLIVADTKQMFLLSGDGDVIEPD 191
Query: 132 ---NGVMA-IGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++A IGSGGS+AL+AA ALM +TQ +A EI ++M IAA+IC+Y+N ++ +E LK
Sbjct: 192 AVGDGLIATIGSGGSFALAAATALMENTQMTAREIVERSMKIAAEICIYSNQSVTIEELK 251
Query: 187 VGD 189
+
Sbjct: 252 AAE 254
>gi|170734441|ref|YP_001766388.1| ATP-dependent protease peptidase subunit [Burkholderia cenocepacia
MC0-3]
gi|254246900|ref|ZP_04940221.1| protease HslVU, subunit HslV [Burkholderia cenocepacia PC184]
gi|238065814|sp|B1K0G1|HSLV_BURCC RecName: Full=ATP-dependent protease subunit HslV
gi|124871676|gb|EAY63392.1| protease HslVU, subunit HslV [Burkholderia cenocepacia PC184]
gi|169817683|gb|ACA92266.1| 20S proteasome A and B subunits [Burkholderia cenocepacia MC0-3]
Length = 178
Score = 280 bits (716), Expect = 9e-74, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL+ +T+ S EI K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALVENTELSPREIVEKSLGIAGDMCIYTNHNRIIETIE 178
>gi|241206992|ref|YP_002978088.1| ATP-dependent protease peptidase subunit [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240860882|gb|ACS58549.1| 20S proteasome A and B subunits [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 175
Score = 280 bits (716), Expect = 9e-74, Method: Composition-based stats.
Identities = 134/173 (77%), Positives = 155/173 (89%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG++AL+AA ALM T SAEEIAR+A+ IAADICVYTNHN+V+E+L
Sbjct: 122 AIGSGGNFALAAALALMDTDKSAEEIARRALDIAADICVYTNHNVVVESLDAE 174
>gi|330818650|ref|YP_004362355.1| ATP-dependent protease peptidase subunit [Burkholderia gladioli
BSR3]
gi|327371043|gb|AEA62399.1| ATP-dependent protease peptidase subunit [Burkholderia gladioli
BSR3]
Length = 178
Score = 280 bits (716), Expect = 9e-74, Method: Composition-based stats.
Identities = 102/176 (57%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QYHGTTIVSVRRGEQVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ ADKT TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADKTTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA +AARAL +T+ S EI +KA++IA D+C+YTNH+ ++ET++
Sbjct: 123 GGICAIGSGGSYAQAAARALAENTELSPGEIVKKALTIAGDMCIYTNHSHIIETIE 178
>gi|78067910|ref|YP_370679.1| ATP-dependent protease peptidase subunit [Burkholderia sp. 383]
gi|123567386|sp|Q39BY1|HSLV_BURS3 RecName: Full=ATP-dependent protease subunit HslV
gi|77968655|gb|ABB10035.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Burkholderia sp. 383]
Length = 178
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ S EI K++ IA D+C+YTNHN ++ET++
Sbjct: 123 EGICAIGSGGAYAQAAARALAENTELSPREIVEKSLEIAGDMCIYTNHNRIIETIE 178
>gi|85710345|ref|ZP_01041410.1| ATP-dependent protease peptidase subunit [Erythrobacter sp. NAP1]
gi|85689055|gb|EAQ29059.1| ATP-dependent protease peptidase subunit [Erythrobacter sp. NAP1]
Length = 186
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 116/180 (64%), Positives = 150/180 (83%), Gaps = 1/180 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSS 65
H ++ H TTI+ V++ G V+AGDGQVS+G TVMK NARKVRR+G+G ++AGFAG++
Sbjct: 7 DHGLIQWHGTTIIGVKRGGKTVVAGDGQVSMGNTVMKPNARKVRRIGEGEKVVAGFAGAT 66
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTL ERLE+KLEQY QL+R+SVELAKDWR DKYLRNLEA++++AD+ LV+TG G
Sbjct: 67 ADAFTLFERLERKLEQYSGQLMRASVELAKDWRTDKYLRNLEALMIVADEESLLVLTGNG 126
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE G+ AIGSGG+YAL+AARAL + AE+IARKAM++AA+ICV+TN N+ +ET+
Sbjct: 127 DVLEPEGGIAAIGSGGNYALAAARALSDYEEDAEQIARKAMAVAAEICVFTNGNLTVETV 186
>gi|322382309|ref|ZP_08056216.1| ATP-dependent protease peptidase subunit-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321153662|gb|EFX46037.1| ATP-dependent protease peptidase subunit-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 183
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 100/178 (56%), Positives = 136/178 (76%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ HATTI +R+DG IAGDGQV+ G +MK A+KVRRL +G +IAGFAGS ADA
Sbjct: 6 MSFHATTIFAMRRDGEGAIAGDGQVTFGENMIMKQTAKKVRRLYRGKVIAGFAGSVADAI 65
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE++ L R++VELAKDWR D+ LR LEAM+++ D + L+I+G G+++E
Sbjct: 66 TLFEKFEGKLEEHHGNLQRAAVELAKDWRSDRVLRKLEAMLIVMDTSGLLLISGNGEIIE 125
Query: 130 PENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGGS+ALSA RAL Q SA++IA+ ++ +AADICVYTNHNI++E L
Sbjct: 126 PDDGIIAIGSGGSFALSAGRALAKYAPQMSAKDIAKASLEMAADICVYTNHNIIVEEL 183
>gi|311030137|ref|ZP_07708227.1| ATP-dependent protease peptidase subunit [Bacillus sp. m3-13]
Length = 180
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 96/177 (54%), Positives = 128/177 (72%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ G ++GDGQV+ G VMK ARKVR+L G I+AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHKGQCAMSGDGQVTFGNAVVMKHTARKVRKLFNGRILAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE+Y + RS+VELAK+WR DK LR LEAM+++ D++ L+++G G+V+EP+
Sbjct: 64 FEMFEAKLEEYNGNIQRSAVELAKEWRSDKVLRKLEAMLIVMDESSMLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YALSA RAL +A EIA+ ++ A +ICVYTN NI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKRYAGEHMTAREIAKASLETAGEICVYTNDNIIVEEL 180
>gi|299822640|ref|ZP_07054526.1| ATP-dependent protease HslVU [Listeria grayi DSM 20601]
gi|299816169|gb|EFI83407.1| ATP-dependent protease HslVU [Listeria grayi DSM 20601]
Length = 179
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 98/179 (54%), Positives = 134/179 (74%), Gaps = 4/179 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V+ +G +AGDGQV+LG++V MK A+KVR+L GN+IAGFAGS ADAF
Sbjct: 1 MELHATTIFAVQHNGKAAMAGDGQVTLGESVVMKHTAKKVRKLFNGNVIAGFAGSVADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R+SVELAK WR D LR LEAM+++ DK L+++G G+V+E
Sbjct: 61 TLFEKFENKLNEYNGNLERASVELAKQWRSDNVLRKLEAMLIVMDKEKLLLVSGTGEVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGG+YAL+A RAL A+EIAR A+ IA++ICV+TN +I +E L
Sbjct: 121 PDDGILAIGSGGNYALAAGRALKRYSSEVIEAKEIARNALQIASEICVFTNDHITVEEL 179
>gi|154246237|ref|YP_001417195.1| ATP-dependent protease peptidase subunit [Xanthobacter
autotrophicus Py2]
gi|154160322|gb|ABS67538.1| 20S proteasome A and B subunits [Xanthobacter autotrophicus Py2]
Length = 182
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 118/179 (65%), Positives = 148/179 (82%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H ++ TTI+TVRK V IAGDGQV+LGQTV+K+NARKVRRLG+G++I GFAG++A
Sbjct: 2 QHSPDTIYGTTIVTVRKGSRVAIAGDGQVTLGQTVLKSNARKVRRLGRGDVIGGFAGATA 61
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++AD +I+LV+TG GD
Sbjct: 62 DAFTLFERLEAKLEQYPGQLQRAAVELAKDWRTDRYLRRLEAMMIVADASISLVLTGTGD 121
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE GV IGSGG +AL+AARAL+ + E I R+++ IAADICVYTN NIV+ET+
Sbjct: 122 VLEPEVGVAGIGSGGMFALAAARALLDREEDPEAIVRRSLEIAADICVYTNRNIVVETI 180
>gi|304436893|ref|ZP_07396857.1| ATP-dependent protease HslVU [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370092|gb|EFM23753.1| ATP-dependent protease HslVU [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 179
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 101/178 (56%), Positives = 131/178 (73%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ HATTI+ V+KDG V IAGDGQV+ G+ +MKANARKVRRL G I+AGFAGS ADAF
Sbjct: 1 MTFHATTIVAVKKDGKVAIAGDGQVTFGERAIMKANARKVRRLYHGKILAGFAGSVADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE Y L R++VELAKDWR DK LR LEA++L+AD+ L+I+G G+V+E
Sbjct: 61 TLFEKFEVKLESYSGNLQRAAVELAKDWRTDKVLRKLEALLLVADQDSILMISGNGEVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P+ AIGSGG + +A + + A IA++++SIAADICVYTNH+I +E L+
Sbjct: 121 PDGDCTAIGSGGFFALAAARALVAHSTLDAPAIAKESLSIAADICVYTNHHITVEVLE 178
>gi|328865749|gb|EGG14135.1| Heat shock protein HslV [Dictyostelium fasciculatum]
Length = 271
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 108/181 (59%), Positives = 141/181 (77%), Gaps = 1/181 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
H ++ ATTIL+VR+ G VVI GDGQV+ G +++K NA+K+R+L +G I+AGFAGS A
Sbjct: 47 DHDPMRKKATTILSVRRGGKVVIIGDGQVTQGHSIVKPNAKKIRKLHEGTIVAGFAGSVA 106
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL + LEKKL ++ L +S VELA+ WR DKY R LEA I++ADK ITL I G GD
Sbjct: 107 DAFTLFDLLEKKLTEHRGLLTKSCVELAQQWRTDKYYRKLEASIIVADKDITLNIDGNGD 166
Query: 127 VLEPENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEP +GV AIGSGG +AL+AARAL++ + SAEEIA+++M IAADIC+YTNHN ++ET+
Sbjct: 167 VLEPNDGVSAIGSGGEFALAAARALLTVPELSAEEIAQRSMKIAADICIYTNHNFIMETI 226
Query: 186 K 186
Sbjct: 227 D 227
>gi|99082689|ref|YP_614843.1| ATP-dependent protease peptidase subunit [Ruegeria sp. TM1040]
gi|123378597|sp|Q1GCN5|HSLV_SILST RecName: Full=ATP-dependent protease subunit HslV
gi|99038969|gb|ABF65581.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Ruegeria sp. TM1040]
Length = 185
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 114/184 (61%), Positives = 141/184 (76%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M + + H TTI+ VRK VV+AGDGQVSLGQTV+K +ARKVRRL G +++AGF
Sbjct: 1 MAEDQFP-GWHGTTIIGVRKGDEVVVAGDGQVSLGQTVIKGSARKVRRLSPGGYDVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D VI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLQRASVELAKDWRTDKYLQKLEAMLIVTDGKDLYVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR +M + AE +AR AM+IA+DICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARGMMDSDRDAETVARDAMAIASDICVYTNGNLT 179
Query: 182 LETL 185
+E +
Sbjct: 180 VERI 183
>gi|301119701|ref|XP_002907578.1| ATP-dependent protease hslV [Phytophthora infestans T30-4]
gi|262106090|gb|EEY64142.1| ATP-dependent protease hslV [Phytophthora infestans T30-4]
Length = 209
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 117/189 (61%), Positives = 147/189 (77%), Gaps = 1/189 (0%)
Query: 2 VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
V + A MH TTIL VRK+G V + GDGQVSLG TV+K NA+KVRR+G+ +I+AGF
Sbjct: 13 VRIARFSDAPTMHGTTILCVRKNGKVCLIGDGQVSLGHTVVKPNAKKVRRIGE-HIVAGF 71
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTL+ERLE KL++YP QL RS VELAKDWR DKYLR LEA+++++D + +
Sbjct: 72 AGSTADAFTLMERLEAKLDEYPGQLTRSCVELAKDWRTDKYLRRLEAILIVSDINQSYTL 131
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEP +G++ IGSGG+YAL+AARAL+ AE I RKAM IAADICVYTN N+V
Sbjct: 132 TGNGDVLEPHDGIIGIGSGGTYALAAARALIDQDLDAETIGRKAMKIAADICVYTNGNVV 191
Query: 182 LETLKVGDE 190
+E L+ G +
Sbjct: 192 VEMLEEGKD 200
>gi|161526255|ref|YP_001581267.1| ATP-dependent protease peptidase subunit [Burkholderia multivorans
ATCC 17616]
gi|189349031|ref|YP_001944659.1| ATP-dependent protease peptidase subunit [Burkholderia multivorans
ATCC 17616]
gi|221201906|ref|ZP_03574943.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia multivorans CGD2M]
gi|221207588|ref|ZP_03580596.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia multivorans CGD2]
gi|221215813|ref|ZP_03588772.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia multivorans CGD1]
gi|238065816|sp|A9AC32|HSLV_BURM1 RecName: Full=ATP-dependent protease subunit HslV
gi|160343684|gb|ABX16770.1| 20S proteasome A and B subunits [Burkholderia multivorans ATCC
17616]
gi|189333053|dbj|BAG42123.1| ATP-dependent HslUV protease subunit HslV [Burkholderia multivorans
ATCC 17616]
gi|221164349|gb|EED96836.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia multivorans CGD1]
gi|221172434|gb|EEE04873.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia multivorans CGD2]
gi|221178326|gb|EEE10736.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Burkholderia multivorans CGD2M]
Length = 178
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADANTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTELSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|107024022|ref|YP_622349.1| ATP-dependent protease peptidase subunit [Burkholderia cenocepacia
AU 1054]
gi|116691109|ref|YP_836732.1| ATP-dependent protease peptidase subunit [Burkholderia cenocepacia
HI2424]
gi|123371180|sp|Q1BSM9|HSLV_BURCA RecName: Full=ATP-dependent protease subunit HslV
gi|166221629|sp|A0KBG2|HSLV_BURCH RecName: Full=ATP-dependent protease subunit HslV
gi|105894211|gb|ABF77376.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Burkholderia cenocepacia AU 1054]
gi|116649198|gb|ABK09839.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Burkholderia cenocepacia HI2424]
Length = 178
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 99/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL+ +T S +I K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALVENTDLSPRDIVEKSLGIAGDMCIYTNHNRIIETIE 178
>gi|319424865|gb|ADV52939.1| 20S proteasome A and B subunits [Shewanella putrefaciens 200]
Length = 174
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 101/171 (59%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++ VVIAGDGQVSLG TVMK NA+KVRRL +AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKALAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + LLRS+VELAKDWR D+ LR LEAM+++AD +L+ITG GDV++PE ++
Sbjct: 62 EAKLEMHQGHLLRSAVELAKDWRTDRMLRKLEAMLVVADAEASLIITGNGDVVQPEYDLV 121
Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+Y +A L +T+ SA EIA K+++IA DICV+TN +E L
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAGDICVFTNQFKTIEEL 172
>gi|323524457|ref|YP_004226610.1| 20S proteasome subunits A/B [Burkholderia sp. CCGE1001]
gi|323381459|gb|ADX53550.1| 20S proteasome A and B subunits [Burkholderia sp. CCGE1001]
Length = 178
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 102/176 (57%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +TQ S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALADNTQLSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|170693981|ref|ZP_02885137.1| 20S proteasome A and B subunits [Burkholderia graminis C4D1M]
gi|170141053|gb|EDT09225.1| 20S proteasome A and B subunits [Burkholderia graminis C4D1M]
Length = 178
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AA+AL +T+ S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALADNTELSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|226313076|ref|YP_002772970.1| ATP-dependent protease peptidase subunit [Brevibacillus brevis NBRC
100599]
gi|259491384|sp|C0ZFA7|HSLV_BREBN RecName: Full=ATP-dependent protease subunit HslV
gi|226096024|dbj|BAH44466.1| ATP-dependent protease [Brevibacillus brevis NBRC 100599]
Length = 180
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 96/177 (54%), Positives = 134/177 (75%), Gaps = 3/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI V+ +G V +AGDGQV+ G VMK A+KVRRL +G ++AGFAGS ADA T
Sbjct: 3 QFHATTIFAVQHNGSVAMAGDGQVTFGNSMVMKHGAKKVRRLYRGEVLAGFAGSVADAIT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KLE+Y L R++VELAK+WRMDK LR LEAM+++A+K L+I+G G+++EP
Sbjct: 63 LFEKFEGKLEEYHGNLQRAAVELAKEWRMDKILRRLEAMMIVANKEHLLLISGNGEIIEP 122
Query: 131 ENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGGS+AL+A RAL + A EIA ++ AA+ICV+TN+N+V++ L
Sbjct: 123 DDGILAIGSGGSFALAAGRALKTYAPHLGAREIAEASLRTAAEICVFTNNNLVVDEL 179
>gi|170785086|pdb|2Z3A|A Chain A, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785087|pdb|2Z3A|B Chain B, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785088|pdb|2Z3A|C Chain C, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785089|pdb|2Z3A|D Chain D, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785090|pdb|2Z3A|E Chain E, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785091|pdb|2Z3A|F Chain F, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785092|pdb|2Z3A|G Chain G, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785093|pdb|2Z3A|H Chain H, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785094|pdb|2Z3A|I Chain I, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785095|pdb|2Z3A|J Chain J, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785096|pdb|2Z3A|K Chain K, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785097|pdb|2Z3A|L Chain L, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785098|pdb|2Z3B|A Chain A, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785099|pdb|2Z3B|B Chain B, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785100|pdb|2Z3B|C Chain C, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785101|pdb|2Z3B|D Chain D, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785102|pdb|2Z3B|E Chain E, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785103|pdb|2Z3B|F Chain F, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785104|pdb|2Z3B|G Chain G, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785105|pdb|2Z3B|H Chain H, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785106|pdb|2Z3B|I Chain I, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785107|pdb|2Z3B|J Chain J, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785108|pdb|2Z3B|K Chain K, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
gi|170785109|pdb|2Z3B|L Chain L, Crystal Structure Of Bacillus Subtilis Codw, A Non-
Canonical Hslv-Like Peptidase With An Impaired Catalytic
Apparatus
Length = 180
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 97/178 (54%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ G ++GDGQV+ GQ VMK ARKVR+L G ++AGFAGS ADAFTL
Sbjct: 3 FHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAK+WR DK LR LEAM+++ ++ L+++G G+V+EP+
Sbjct: 63 FEKFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG+YAL+A RAL SA EIAR A+ A +ICVYTN I+LE L+
Sbjct: 123 DGILAIGSGGNYALAAGRALKKHAGESMSASEIARAALETAGEICVYTNDQIILEELE 180
>gi|304404238|ref|ZP_07385900.1| 20S proteasome A and B subunits [Paenibacillus curdlanolyticus YK9]
gi|304347216|gb|EFM13048.1| 20S proteasome A and B subunits [Paenibacillus curdlanolyticus YK9]
Length = 180
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 99/178 (55%), Positives = 134/178 (75%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
++ HATTI VR +G IAGDGQV+ G VMK A+KVRRL +G ++AGFAGS ADA
Sbjct: 3 MQFHATTICAVRHNGQGAIAGDGQVTFGNSMVMKGTAKKVRRLYRGQVVAGFAGSVADAI 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE++ L RS+VELAK+WR D+ LR LEAM+L+ D L+I+G G+++E
Sbjct: 63 TLFEKFEGKLEEHHGNLQRSAVELAKEWRSDRVLRKLEAMLLVMDAQGLLLISGNGEIIE 122
Query: 130 PENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ V+AIGSGGS+ALSAARAL +T A+++A+ A+ IAADICV+TN NI++E +
Sbjct: 123 PDDDVLAIGSGGSFALSAARALKQHATHMEAKDMAKAALEIAADICVFTNRNIIVEEV 180
>gi|167835015|ref|ZP_02461898.1| ATP-dependent protease peptidase subunit [Burkholderia
thailandensis MSMB43]
Length = 178
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 101/176 (57%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADATSTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T S EI KA+ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTDLSPREIVEKALEIAGDMCIYTNHNRIIETIE 178
>gi|163732948|ref|ZP_02140392.1| ATP-dependent protease peptidase subunit [Roseobacter litoralis Och
149]
gi|161393483|gb|EDQ17808.1| ATP-dependent protease peptidase subunit [Roseobacter litoralis Och
149]
Length = 185
Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats.
Identities = 119/186 (63%), Positives = 145/186 (77%), Gaps = 3/186 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M + H TTI+ V+KDG VVIAGDGQVSLGQTV+K ARKVRRL G +++AGF
Sbjct: 1 MARNEFP-GWHGTTIIGVKKDGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM++++D VI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGKDIFVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG+YAL+AAR +M ++ +AEE+AR AM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNYALAAARGMMDSKRTAEEVARDAMAIAADICVYTNGNLT 179
Query: 182 LETLKV 187
+E +
Sbjct: 180 VEKISA 185
>gi|144898076|emb|CAM74940.1| ATP-dependent protease [Magnetospirillum gryphiswaldense MSR-1]
Length = 181
Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats.
Identities = 119/176 (67%), Positives = 150/176 (85%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAF 69
H TTIL+VRK+G VVIAGDGQVSLGQTV+KANARKVRR+G +I+ GFAG++ADAF
Sbjct: 6 PSWHGTTILSVRKNGRVVIAGDGQVSLGQTVIKANARKVRRIGANNDILVGFAGATADAF 65
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TLLERLE KLE++P QL R+ VELAKDWR D+YLR LEAM+ +ADK ++LV+TG GDVLE
Sbjct: 66 TLLERLEGKLEKHPGQLTRACVELAKDWRTDRYLRRLEAMMAVADKEVSLVLTGQGDVLE 125
Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P +G++ IGSGG+YAL+AARAL+ + AEEI RK+M++AADICVYTN N+++E+L
Sbjct: 126 PSDGIIGIGSGGNYALAAARALIDMEVDAEEIVRKSMAVAADICVYTNSNVIIESL 181
>gi|326315559|ref|YP_004233231.1| ATP-dependent protease HslVU, peptidase subunit [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323372395|gb|ADX44664.1| ATP-dependent protease HslVU, peptidase subunit [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 182
Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats.
Identities = 99/180 (55%), Positives = 137/180 (76%), Gaps = 6/180 (3%)
Query: 12 KMHATTILTVRKDG-----VVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+ H TTIL+VR+ V I GDGQV+LG V+K +ARKVR+L G ++AGFAG++A
Sbjct: 3 QFHGTTILSVRRQAADGTIQVAIGGDGQVTLGNIVVKGSARKVRKLHHGKVLAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ER E KL+++ L R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GD
Sbjct: 63 DAFTLFERFEAKLDKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADASASLIITGNGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE G++AIGSGG+YA SAA+AL+ T+ SAE+I RK+++IA ++C+YTN + +ETL
Sbjct: 123 VLEPEQGIVAIGSGGAYAHSAAKALLNHTELSAEDIVRKSLAIAGELCIYTNMHHTVETL 182
>gi|85372870|ref|YP_456932.1| ATP-dependent protease peptidase subunit [Erythrobacter litoralis
HTCC2594]
gi|84785953|gb|ABC62135.1| ATP-dependent protease HslVU peptidase subunit [Erythrobacter
litoralis HTCC2594]
Length = 185
Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats.
Identities = 113/180 (62%), Positives = 151/180 (83%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
+ H + H TTI+ V++ +V+AGDGQVS+G TVMK NA+KVRR+G+G ++AGFAG++
Sbjct: 6 NAHGLTQWHGTTIIGVKRGDKIVVAGDGQVSMGNTVMKPNAKKVRRIGEGKVVAGFAGAT 65
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTL ERLE+KL+QY QL+R++VELAKDWR DKYLRNLEA++++ADK LV+TG G
Sbjct: 66 ADAFTLFERLERKLDQYSGQLMRAAVELAKDWRTDKYLRNLEALMIVADKETLLVLTGNG 125
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
DVLEPE G+ AIGSGG+YAL+AARAL ++ AE+IARKAM++AA+ICV+TN ++ LET+
Sbjct: 126 DVLEPEGGIAAIGSGGNYALAAARALSDYEDDAEQIARKAMAVAAEICVFTNGSVTLETV 185
>gi|228965512|ref|NP_240381.2| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
APS (Acyrthosiphon pisum)]
gi|11132902|sp|P57115|HSLV_BUCAI RecName: Full=ATP-dependent protease subunit HslV
Length = 176
Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats.
Identities = 97/171 (56%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR VVI GDGQ +LG T+MK+N +K+R L +IAGFAG +ADAFTL E
Sbjct: 2 TTILSVRLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
+KKL Y QL R+++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE+ ++
Sbjct: 62 DKKLAMYQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGGSYA S+ARAL+ +T A +I RK+++IAA+IC+YTNHN ++ L
Sbjct: 122 AIGSGGSYAQSSARALIENTHLDANQIVRKSLNIAANICIYTNHNFTIKEL 172
>gi|221508826|gb|EEE34395.1| heat shock protein HSLV, putative [Toxoplasma gondii VEG]
Length = 338
Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats.
Identities = 100/179 (55%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ HATTIL VRK V +AGDG VS GQ ++K NARKVRRL G ++ GFAG++AD
Sbjct: 130 FVPPRHATTILCVRKGDQVCVAGDGMVSQGQMIVKPNARKVRRLQDG-VVCGFAGATADC 188
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTLLE+LE KLE+YP QLLRS VELAK WR D+YLR+LEA++++ADK ++L ++G+GDVL
Sbjct: 189 FTLLEKLEAKLEEYPGQLLRSCVELAKQWRTDRYLRHLEAVLIVADKKMSLEVSGVGDVL 248
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
E +G++ +GSGG YA++AARAL SA EI +++M+IAA +C +TN ++ E L+
Sbjct: 249 ESHDGILGVGSGGPYAVAAARALYDIDGLSAHEICKRSMAIAASMCCHTNDRVIFEVLE 307
>gi|221488320|gb|EEE26534.1| heat shock protein HSLV, putative [Toxoplasma gondii GT1]
Length = 338
Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats.
Identities = 100/179 (55%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ HATTIL VRK V +AGDG VS GQ ++K NARKVRRL G ++ GFAG++AD
Sbjct: 130 FVPPRHATTILCVRKGDQVCVAGDGMVSQGQMIVKPNARKVRRLQDG-VVCGFAGATADC 188
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTLLE+LE KLE+YP QLLRS VELAK WR D+YLR+LEA++++ADK ++L ++G+GDVL
Sbjct: 189 FTLLEKLEAKLEEYPGQLLRSCVELAKQWRTDRYLRHLEAVLIVADKKMSLEVSGVGDVL 248
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
E +G++ +GSGG YA++AARAL SA EI +++M+IAA +C +TN ++ E L+
Sbjct: 249 ESHDGILGVGSGGPYAVAAARALYDIDGLSAHEICKRSMAIAASMCCHTNDRVIFEVLE 307
>gi|237833117|ref|XP_002365856.1| heat shock protein HSLV, putative [Toxoplasma gondii ME49]
gi|211963520|gb|EEA98715.1| heat shock protein HSLV, putative [Toxoplasma gondii ME49]
Length = 338
Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats.
Identities = 100/179 (55%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ HATTIL VRK V +AGDG VS GQ ++K NARKVRRL G ++ GFAG++AD
Sbjct: 130 FVPPRHATTILCVRKGDQVCVAGDGMVSQGQMIVKPNARKVRRLQDG-VVCGFAGATADC 188
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTLLE+LE KLE+YP QLLRS VELAK WR D+YLR+LEA++++ADK ++L ++G+GDVL
Sbjct: 189 FTLLEKLEAKLEEYPGQLLRSCVELAKQWRTDRYLRHLEAVLIVADKKMSLEVSGVGDVL 248
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
E +G++ +GSGG YA++AARAL SA EI +++M+IAA +C +TN ++ E L+
Sbjct: 249 ESHDGILGVGSGGPYAVAAARALYDIDGLSAHEICKRSMAIAASMCCHTNDRVIFEVLE 307
>gi|119474654|ref|ZP_01615007.1| ATP-dependent protease peptidase subunit [marine gamma
proteobacterium HTCC2143]
gi|119450857|gb|EAW32090.1| ATP-dependent protease peptidase subunit [marine gamma
proteobacterium HTCC2143]
Length = 169
Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats.
Identities = 100/168 (59%), Positives = 129/168 (76%), Gaps = 1/168 (0%)
Query: 22 RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
R++G VI GDGQVS+G TVMK NARKVRRL K +IAGFAG +ADAFTL E E +LE+
Sbjct: 2 RRNGKAVIGGDGQVSMGNTVMKGNARKVRRLYKDQVIAGFAGGTADAFTLFELFESQLEK 61
Query: 82 YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
Y QL R++VELAK WR ++ LR LEA++ +ADKT +L+ITG GDV+EPE+ ++AIGSGG
Sbjct: 62 YQGQLTRAAVELAKMWRTERSLRQLEALLAVADKTTSLIITGNGDVIEPEDNLIAIGSGG 121
Query: 142 SYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
YA SAA+AL+ +T SA +I ++++IA DICVYTNHN +E L
Sbjct: 122 PYAQSAAKALLENTDLSAHDIVERSLAIAGDICVYTNHNRTIEELDCE 169
>gi|218885589|ref|YP_002434910.1| ATP-dependent protease peptidase subunit [Desulfovibrio vulgaris
str. 'Miyazaki F']
gi|226704538|sp|B8DKL3|HSLV_DESVM RecName: Full=ATP-dependent protease subunit HslV
gi|218756543|gb|ACL07442.1| 20S proteasome A and B subunits [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 185
Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats.
Identities = 102/180 (56%), Positives = 137/180 (76%), Gaps = 2/180 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTIL VR V +AGDGQV++GQ+V MK ARKVRRL + ++AGFAG++ADAF
Sbjct: 1 MELKGTTILAVRDADGVAMAGDGQVTMGQSVVMKHTARKVRRLYRDRVLAGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER E KLE++ L R++VELAKDWR DKYLR LEAM+L+AD L++TG GDV+E
Sbjct: 61 TLFERFEAKLEEFGGNLTRAAVELAKDWRKDKYLRRLEAMLLVADAETILILTGTGDVIE 120
Query: 130 PENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
P++G+ AIGSGG YALSAARAL T AE + R+AM++A ++CV+TN ++ +ETL+
Sbjct: 121 PDDGIAAIGSGGPYALSAARALSRHTTLDAETVVREAMAVAGELCVFTNGHLTVETLRRN 180
>gi|115353189|ref|YP_775028.1| ATP-dependent protease peptidase subunit [Burkholderia ambifaria
AMMD]
gi|122321967|sp|Q0BAX9|HSLV_BURCM RecName: Full=ATP-dependent protease subunit HslV
gi|115283177|gb|ABI88694.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Burkholderia ambifaria AMMD]
Length = 178
Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ S EI K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTELSPREIVEKSLEIAGDMCIYTNHNRIIETIE 178
>gi|295675158|ref|YP_003603682.1| 20S proteasome A and B subunits [Burkholderia sp. CCGE1002]
gi|295435001|gb|ADG14171.1| 20S proteasome A and B subunits [Burkholderia sp. CCGE1002]
Length = 178
Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats.
Identities = 99/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGNKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AA+AL +T+ S +I K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALADNTELSPRDIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|256828891|ref|YP_003157619.1| 20S proteasome subunits A and B [Desulfomicrobium baculatum DSM
4028]
gi|256578067|gb|ACU89203.1| 20S proteasome A and B subunits [Desulfomicrobium baculatum DSM
4028]
Length = 182
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 109/179 (60%), Positives = 139/179 (77%), Gaps = 2/179 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+M TTIL V+ D V +AGDGQV+LGQ + +K ARKVRRL + I+ GFAGS+ADAFT
Sbjct: 3 EMRGTTILAVKDDKGVSVAGDGQVTLGQAIAIKHGARKVRRLYRDRIVCGFAGSTADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KLE++ L+RSSVELAKDWR DKYLR LEAM+L+AD L+++G GDV+EP
Sbjct: 63 LFEKFEAKLEEFGGNLVRSSVELAKDWRSDKYLRRLEAMLLVADAENILMLSGTGDVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
++GV AIGSGG+YA+SAARAL T SAE+I RK+M+IAA+ICVYTN +I+ ET+
Sbjct: 123 DDGVAAIGSGGAYAMSAARALRRHTDLSAEDIVRKSMAIAAEICVYTNDHIIFETVTRN 181
>gi|296330830|ref|ZP_06873305.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674348|ref|YP_003866020.1| two-component ATP-dependent protease (N-terminal serine protease)
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296151835|gb|EFG92709.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412592|gb|ADM37711.1| two-component ATP-dependent protease (N-terminal serine protease)
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 181
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 97/178 (54%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ G ++GDGQV+ GQ VMK ARKVR+L G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAK+WR DK LR LEAM+++ ++ L+++G G+V+EP+
Sbjct: 64 FEKFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG+YAL+A RAL SA EIAR A+ A +ICVYTN I+LE L+
Sbjct: 124 DGILAIGSGGNYALAAGRALKKHAGDSMSASEIARAALETAGEICVYTNDQIILEELE 181
>gi|138894734|ref|YP_001125187.1| ATP-dependent protease peptidase subunit [Geobacillus
thermodenitrificans NG80-2]
gi|196247645|ref|ZP_03146347.1| 20S proteasome A and B subunits [Geobacillus sp. G11MC16]
gi|166222977|sp|A4IM88|HSLV_GEOTN RecName: Full=ATP-dependent protease subunit HslV
gi|134266247|gb|ABO66442.1| ATP-dependent protease HslV [Geobacillus thermodenitrificans
NG80-2]
gi|196212429|gb|EDY07186.1| 20S proteasome A and B subunits [Geobacillus sp. G11MC16]
Length = 180
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 97/178 (54%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
HATTI +R +G +AGDGQV+ G VMK A+KVRRL G ++AGFAGS ADAFT
Sbjct: 3 GFHATTIFAIRHNGAAAMAGDGQVTFGNAVVMKHTAKKVRRLFHGKVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KLEQ+ L R++VELAK+WR +K LR LEAM+++ D L+++G G+V+EP
Sbjct: 63 LFEMFEGKLEQFNGNLPRAAVELAKEWRSNKVLRRLEAMLIVMDGQHLLLVSGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG YAL+A RAL +A+EIA+ A+ IAADICVYTN +I++E L
Sbjct: 123 DDGMLAIGSGGHYALAAGRALKQYAGASMTAKEIAKAALEIAADICVYTNGHIIVEEL 180
>gi|16078678|ref|NP_389497.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
subtilis str. 168]
gi|221309490|ref|ZP_03591337.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313815|ref|ZP_03595620.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318739|ref|ZP_03600033.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323010|ref|ZP_03604304.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321315381|ref|YP_004207668.1| ATP-dependent protease subunit HslV [Bacillus subtilis BSn5]
gi|729778|sp|P39070|CLPQ_BACSU RecName: Full=ATP-dependent protease subunit ClpQ
gi|73535734|pdb|1YYF|D Chain D, Correction Of X-Ray Intensities From An Hslv-Hslu Co-
Crystal Containing Lattice Translocation Defects
gi|73535735|pdb|1YYF|C Chain C, Correction Of X-Ray Intensities From An Hslv-Hslu Co-
Crystal Containing Lattice Translocation Defects
gi|535349|gb|AAB03370.1| CodW [Bacillus subtilis subsp. subtilis str. JH642]
gi|2633987|emb|CAB13488.1| two-component ATP-dependent protease (N-terminal serine protease)
[Bacillus subtilis subsp. subtilis str. 168]
gi|291484166|dbj|BAI85241.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
natto BEST195]
gi|320021655|gb|ADV96641.1| ATP-dependent protease subunit HslV [Bacillus subtilis BSn5]
Length = 181
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 97/178 (54%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ G ++GDGQV+ GQ VMK ARKVR+L G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAK+WR DK LR LEAM+++ ++ L+++G G+V+EP+
Sbjct: 64 FEKFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG+YAL+A RAL SA EIAR A+ A +ICVYTN I+LE L+
Sbjct: 124 DGILAIGSGGNYALAAGRALKKHAGESMSASEIARAALETAGEICVYTNDQIILEELE 181
>gi|302381135|ref|YP_003816958.1| 20S proteasome A and subunit betas [Brevundimonas subvibrioides
ATCC 15264]
gi|302191763|gb|ADK99334.1| 20S proteasome A and B subunits [Brevundimonas subvibrioides ATCC
15264]
Length = 189
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 117/179 (65%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
H TTIL VRKDG VIAGDGQVS+G T++K ARKVR L G ++AGFAG++ADAFT
Sbjct: 9 PDWHGTTILAVRKDGRTVIAGDGQVSMGATIVKGAARKVRTLAGGKVLAGFAGATADAFT 68
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L+ERLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+ADK +TG+GDVLEP
Sbjct: 69 LIERLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADKDAIFTVTGVGDVLEP 128
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
E GV A+GSGG+YAL+AARAL+ +T AE +AR+AM+IAADICVYTN N+ +E L G
Sbjct: 129 EYGVAAVGSGGNYALAAARALIDNTDMDAEAVARRAMAIAADICVYTNGNLTVEILGGG 187
>gi|309389213|gb|ADO77093.1| ATP dependent peptidase CodWX, CodW component [Halanaerobium
praevalens DSM 2228]
Length = 186
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 101/179 (56%), Positives = 130/179 (72%), Gaps = 2/179 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTI+ V+ + + +AGDGQV+LG TVMK+ A+KVRRL G I+AGFAG+SADAFTL
Sbjct: 6 FDATTIVAVKHNSSMALAGDGQVTLGNTVMKSTAKKVRRLYNGKILAGFAGTSADAFTLF 65
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E KLE+Y L R++VELAK+WR DK LR LEA++++AD L+I+G GDV+EP+
Sbjct: 66 EKFEAKLEEYHGSLQRAAVELAKEWRTDKILRKLEALLIVADLDEILIISGNGDVIEPDG 125
Query: 133 GVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
+ AIGSGG YA +AA AL A EIA +A+ IAA IC+YTN NI LE LK G+
Sbjct: 126 KITAIGSGGPYARAAAIALSDHAQDMKAGEIASEALKIAASICIYTNENISLEELKGGE 184
>gi|320105388|ref|YP_004180978.1| 20S proteasome subunits A/B [Terriglobus saanensis SP1PR4]
gi|319923909|gb|ADV80984.1| 20S proteasome A and B subunits [Terriglobus saanensis SP1PR4]
Length = 219
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 92/181 (50%), Positives = 131/181 (72%), Gaps = 7/181 (3%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT++ VR++G VV+A DGQV+LG VMK A+K+RRL + ++AGFAGS+ADAF+L
Sbjct: 37 RIRSTTVICVRRNGHVVMAADGQVTLGSAVMKHGAKKIRRLYQDKVLAGFAGSTADAFSL 96
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
R E KLEQ+ L R++VELAKDWR DK LR LEA++++AD +++G GDV+EP+
Sbjct: 97 FARFESKLEQFAGNLSRAAVELAKDWRTDKMLRQLEALLIVADVNQVYLLSGNGDVIEPD 156
Query: 132 ------NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
V IGSGGS+A +AA ALM +T +A +IA K+M IA +IC+YTN ++ +E
Sbjct: 157 AIAGGVGVVATIGSGGSFAQAAAYALMENTDLTARQIAEKSMKIAGEICIYTNDSVTIEE 216
Query: 185 L 185
L
Sbjct: 217 L 217
>gi|260886591|ref|ZP_05897854.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
sputigena ATCC 35185]
gi|330839575|ref|YP_004414155.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
sputigena ATCC 35185]
gi|260863734|gb|EEX78234.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
sputigena ATCC 35185]
gi|329747339|gb|AEC00696.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
sputigena ATCC 35185]
Length = 180
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 104/176 (59%), Positives = 137/176 (77%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ VR+ G IAGDGQV+ GQ+ +MK+ ARKVRRL G ++AGFAGS ADAFTL
Sbjct: 5 FHATTIVAVRQKGKTAIAGDGQVTFGQSAIMKSTARKVRRLYHGKVVAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE++ L+R+SVELAK+WR D+ LR LEA++L+AD L+I+G G+V+EP+
Sbjct: 65 FEKFEAKLEEFNGNLMRASVELAKEWRTDRVLRKLEALLLVADAETLLMISGGGEVIEPD 124
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
V AIGSGG YAL+AARAL+ T+ A EIA++A+++AADICV+TNHNI +E L
Sbjct: 125 GDVAAIGSGGFYALAAARALVKHTEMEAAEIAKEALTLAADICVFTNHNIKVEELD 180
>gi|171320570|ref|ZP_02909594.1| 20S proteasome A and B subunits [Burkholderia ambifaria MEX-5]
gi|172062040|ref|YP_001809692.1| ATP-dependent protease peptidase subunit [Burkholderia ambifaria
MC40-6]
gi|238065813|sp|B1YPR2|HSLV_BURA4 RecName: Full=ATP-dependent protease subunit HslV
gi|171094197|gb|EDT39280.1| 20S proteasome A and B subunits [Burkholderia ambifaria MEX-5]
gi|171994557|gb|ACB65476.1| 20S proteasome A and B subunits [Burkholderia ambifaria MC40-6]
Length = 178
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ S EI K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTELSPREIVEKSLEIAGDMCIYTNHNRIIETIE 178
>gi|163742595|ref|ZP_02149981.1| ATP-dependent protease peptidase subunit [Phaeobacter gallaeciensis
2.10]
gi|161384180|gb|EDQ08563.1| ATP-dependent protease peptidase subunit [Phaeobacter gallaeciensis
2.10]
Length = 188
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 117/189 (61%), Positives = 147/189 (77%), Gaps = 3/189 (1%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAG 60
+M D + H TTI+ V+K G VVIAGDGQVSLGQTV+K +ARKVRRL G +++AG
Sbjct: 1 MMADDQFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGSARKVRRLSPGGFDVVAG 59
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
FAGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D V
Sbjct: 60 FAGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGADMFV 119
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
ITG+GDVLEPE+ V AIGSGG++AL+AAR +M ++ +AE +AR AM+IAADICVYTN +
Sbjct: 120 ITGVGDVLEPEHDVAAIGSGGNFALAAARGMMDSERNAEAVARDAMAIAADICVYTNGRL 179
Query: 181 VLETLKVGD 189
+E++ D
Sbjct: 180 TVESISQKD 188
>gi|311086300|gb|ADP66382.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
LL01 (Acyrthosiphon pisum)]
gi|311086874|gb|ADP66955.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
TLW03 (Acyrthosiphon pisum)]
gi|311087464|gb|ADP67544.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
JF99 (Acyrthosiphon pisum)]
gi|311087949|gb|ADP68028.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
JF98 (Acyrthosiphon pisum)]
Length = 176
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 97/171 (56%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR VVI GDGQ +LG T+MK+N +K+R L +IAGFAG +ADAFTL E
Sbjct: 2 TTILSVRLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
+KKL Y QL R+++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE+ ++
Sbjct: 62 DKKLAMYQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGGSYA S+ARAL+ +T A +I RK+++IAA+IC+YTNHN ++ L
Sbjct: 122 AIGSGGSYAQSSARALIENTNLDANQIVRKSLNIAANICIYTNHNFTIKEL 172
>gi|157692294|ref|YP_001486756.1| ATP-dependent protease peptidase subunit [Bacillus pumilus
SAFR-032]
gi|194014435|ref|ZP_03053052.1| ATP-dependent protease HslV [Bacillus pumilus ATCC 7061]
gi|166918419|sp|A8FD79|CLPQ_BACP2 RecName: Full=ATP-dependent protease subunit ClpQ
gi|157681052|gb|ABV62196.1| T01 family HslU component of HslUV peptidase [Bacillus pumilus
SAFR-032]
gi|194013461|gb|EDW23026.1| ATP-dependent protease HslV [Bacillus pumilus ATCC 7061]
Length = 181
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 97/178 (54%), Positives = 129/178 (72%), Gaps = 4/178 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V+ G +AGDGQV+ GQ VMK A+KVRRL G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVQHKGKSAMAGDGQVTFGQAVVMKHTAKKVRRLFGGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAK+WR DK LR LEAM+++ +K L+++G G+V+EP+
Sbjct: 64 FEKFETKLEEYGGNLKRAAVELAKEWRSDKMLRQLEAMLIVMNKDSILLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G++AIGSGG+YALSA RAL + +A +IA+ A+ A +ICVYTN I LE L+
Sbjct: 124 DGILAIGSGGNYALSAGRALKTHAGDHLTARDIAKAALETAGEICVYTNDQITLEELE 181
>gi|21672817|ref|NP_660884.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
Sg (Schizaphis graminum)]
gi|25008568|sp|Q8K906|HSLV_BUCAP RecName: Full=ATP-dependent protease subunit HslV
gi|21623469|gb|AAM68095.1| heat shock protein HslV [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 176
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 98/171 (57%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR VVI GDGQ +LG T+MK+N +K+R L +IAGFAG +ADAFTL E
Sbjct: 2 TTILSVRLKNKVVIGGDGQATLGNTIMKSNVKKIRTLYHEKVIAGFAGGTADAFTLFEMF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKL Y QL R+++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE+ ++
Sbjct: 62 EKKLAMYQGQLPRAAIELAKDWRSDRMLRKLEALLAVADKDTSLIITGNGDVIQPEDDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGGSYA SAARAL+ +T +A+EI K+++IAA+IC+YTNH+ ++ L
Sbjct: 122 AIGSGGSYAQSAARALINNTTLNADEIVEKSLNIAANICIYTNHSFTIKEL 172
>gi|134297265|ref|YP_001121000.1| ATP-dependent protease peptidase subunit [Burkholderia
vietnamiensis G4]
gi|166221630|sp|A4JIR2|HSLV_BURVG RecName: Full=ATP-dependent protease subunit HslV
gi|134140422|gb|ABO56165.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Burkholderia vietnamiensis G4]
Length = 178
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T S EI K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTDMSPREIVEKSLEIAGDMCIYTNHNRIIETIE 178
>gi|186474841|ref|YP_001856311.1| ATP-dependent protease peptidase subunit [Burkholderia phymatum
STM815]
gi|238065843|sp|B2JJX8|HSLV_BURP8 RecName: Full=ATP-dependent protease subunit HslV
gi|184191300|gb|ACC69265.1| 20S proteasome A and B subunits [Burkholderia phymatum STM815]
Length = 178
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 99/176 (56%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGAKKVRRIYNNKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AA+AL +T S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALADNTDLSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|225851284|ref|YP_002731518.1| ATP-dependent protease peptidase subunit [Persephonella marina
EX-H1]
gi|254802419|sp|C0QS72|HSLV_PERMH RecName: Full=ATP-dependent protease subunit HslV
gi|225645262|gb|ACO03448.1| ATP-dependent protease HslVU, peptidase subunit [Persephonella
marina EX-H1]
Length = 177
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 104/175 (59%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ +TTI VR+DG VIAGDGQV+LG +VMKA+ARK+R+L +G I+ GFAGS+AD L
Sbjct: 3 RTKSTTICIVRRDGKTVIAGDGQVTLGNSVMKASARKIRKLYEGKIVVGFAGSAADGLAL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ERLE+KL +Y LLR++VELAKDWR DK+LR LEA+++ ADK I L+I+G GDV+EP+
Sbjct: 63 MERLEEKLNKYRGNLLRAAVELAKDWRTDKFLRRLEAVMVAADKEIMLLISGNGDVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+AIGSGG YA SAA AL +T SA +I +AM IA +IC+YTN NI +E L
Sbjct: 123 EPVLAIGSGGDYARSAALALYRNTDLSARQIVEEAMKIAGEICIYTNSNITIEEL 177
>gi|260431949|ref|ZP_05785920.1| ATP-dependent protease HslV [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415777|gb|EEX09036.1| ATP-dependent protease HslV [Silicibacter lacuscaerulensis
ITI-1157]
Length = 185
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 119/184 (64%), Positives = 143/184 (77%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M + + H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G I+AGF
Sbjct: 1 MAENDFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFEIVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D VI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGVDMFVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AARA+M + SAE++AR AM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARAMMDSDKSAEQVARDAMAIAADICVYTNGNLT 179
Query: 182 LETL 185
+E +
Sbjct: 180 VERI 183
>gi|313673478|ref|YP_004051589.1| hslv component of hsluv peptidase [Calditerrivibrio nitroreducens
DSM 19672]
gi|312940234|gb|ADR19426.1| HslV component of HslUV peptidase [Calditerrivibrio nitroreducens
DSM 19672]
Length = 175
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 96/174 (55%), Positives = 128/174 (73%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT++ V+ + I DGQV+ G TV+K NA+K+RRL G I+ GFAGS+ADAFTL+
Sbjct: 2 FEGTTVICVKTNDKTAIGADGQVTFGHTVLKNNAKKIRRLYNGEIVCGFAGSTADAFTLI 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER EKKL ++ QLLRS VELAKDWR DKYL++LEAM++ A+K +ITG GDV+EP++
Sbjct: 62 ERFEKKLNEHGGQLLRSCVELAKDWRTDKYLKSLEAMMIAANKDSMYIITGNGDVVEPQH 121
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ AIGSGG YA +AA AL +T A EI +KA+ IA +IC+YTN I++E +
Sbjct: 122 GIAAIGSGGPYAFAAAYALKNNTDLDATEIVKKALDIAGEICIYTNKEIIVEEV 175
>gi|163738009|ref|ZP_02145425.1| ATP-dependent protease peptidase subunit [Phaeobacter gallaeciensis
BS107]
gi|161388625|gb|EDQ12978.1| ATP-dependent protease peptidase subunit [Phaeobacter gallaeciensis
BS107]
Length = 187
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 117/188 (62%), Positives = 144/188 (76%), Gaps = 3/188 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D + H TTI+ V+K G VVIAGDGQVSLGQTV+K +ARKVRRL G +++AGF
Sbjct: 1 MADDQFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGSARKVRRLSPGGFDVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D VI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGADMFVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR +M + +AE +AR AM+IAADICVYTN +
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARGMMDSDRNAEAVARDAMAIAADICVYTNGRLT 179
Query: 182 LETLKVGD 189
+E++ D
Sbjct: 180 VESISQKD 187
>gi|163745125|ref|ZP_02152485.1| ATP-dependent protease peptidase subunit [Oceanibulbus indolifex
HEL-45]
gi|161381943|gb|EDQ06352.1| ATP-dependent protease peptidase subunit [Oceanibulbus indolifex
HEL-45]
Length = 186
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 118/184 (64%), Positives = 140/184 (76%), Gaps = 2/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVR+L G +++AGF
Sbjct: 1 MAQNDDFPGWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRKLSPGGYDVVAGF 60
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D LVI
Sbjct: 61 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGKDLLVI 120
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG+YAL+AARA+M + AE IAR AM+IAADICVYTN +
Sbjct: 121 TGAGDVLEPEHEVAAIGSGGNYALAAARAMMDSDRDAETIARDAMAIAADICVYTNGKLT 180
Query: 182 LETL 185
+E +
Sbjct: 181 VEKI 184
>gi|156935934|ref|YP_001439850.1| ATP-dependent protease peptidase subunit [Cronobacter sakazakii
ATCC BAA-894]
gi|156534188|gb|ABU79014.1| hypothetical protein ESA_03828 [Cronobacter sakazakii ATCC BAA-894]
Length = 170
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 93/165 (56%), Positives = 126/165 (76%), Gaps = 1/165 (0%)
Query: 22 RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
R++G VVI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE
Sbjct: 2 RRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEM 61
Query: 82 YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
+ L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSGG
Sbjct: 62 HQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVVQPENDLIAIGSGG 121
Query: 142 SYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
YA +AARAL+ +T+ A +I K++ IA DIC+YTNH + +E L
Sbjct: 122 PYAQAAARALLENTELGARDIVEKSLGIAGDICIYTNHFLTIEEL 166
>gi|56551142|ref|YP_161981.1| ATP-dependent protease peptidase subunit [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241761497|ref|ZP_04759585.1| 20S proteasome A and B subunits [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|260753208|ref|YP_003226101.1| ATP-dependent protease peptidase subunit [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|81598340|sp|Q5NQY4|HSLV_ZYMMO RecName: Full=ATP-dependent protease subunit HslV
gi|56542716|gb|AAV88870.1| 20S proteasome A and B subunits [Zymomonas mobilis subsp. mobilis
ZM4]
gi|241374404|gb|EER63901.1| 20S proteasome A and B subunits [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|258552571|gb|ACV75517.1| 20S proteasome A and B subunits [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 184
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 118/180 (65%), Positives = 149/180 (82%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+ H TTIL+VR++G VVIAGDGQVS+G TVMK NARKVRRLG G++I GFAG++A
Sbjct: 2 SEDKIGWHGTTILSVRRNGRVVIAGDGQVSMGNTVMKPNARKVRRLGDGSVIGGFAGATA 61
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ERLE KLE++ QLLR++VELAKDWR DKYLRNLEA++++AD +TLV+TG GD
Sbjct: 62 DAFTLFERLEAKLERHNGQLLRAAVELAKDWRTDKYLRNLEALMIVADDQVTLVLTGNGD 121
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
VLEP G+ AIGSGG++ALSAARAL+ + AE IARKA+++AADICV+TN + +ETL+
Sbjct: 122 VLEPVGGIAAIGSGGNFALSAARALVDYEEDAEVIARKALAVAADICVFTNDQVTIETLE 181
>gi|238926945|ref|ZP_04658705.1| T01 family HslU component of HslUV peptidase [Selenomonas flueggei
ATCC 43531]
gi|238885179|gb|EEQ48817.1| T01 family HslU component of HslUV peptidase [Selenomonas flueggei
ATCC 43531]
Length = 179
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 100/178 (56%), Positives = 131/178 (73%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ HATTI+ V+KDG V +AGDGQV+ G+ +MKANARKVRRL G I+AGFAGS ADAF
Sbjct: 1 MTFHATTIVAVKKDGKVAVAGDGQVTFGERAIMKANARKVRRLYHGKILAGFAGSVADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE Y L R++VELAKDWR DK LR LEA++L+AD+ L+I+G G+V+E
Sbjct: 61 TLFEKFEVKLESYSGNLQRAAVELAKDWRTDKVLRKLEALLLVADQDSILMISGNGEVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P+ AIGSGG + +A + + A IA++++SIAADICVYTNH+I +E L+
Sbjct: 121 PDGDCTAIGSGGFFALAAARALVAHSALDAPAIAKESLSIAADICVYTNHHITVEVLE 178
>gi|91781466|ref|YP_556672.1| ATP-dependent protease peptidase subunit [Burkholderia xenovorans
LB400]
gi|296161396|ref|ZP_06844203.1| 20S proteasome A and B subunits [Burkholderia sp. Ch1-1]
gi|123169128|sp|Q146W9|HSLV_BURXL RecName: Full=ATP-dependent protease subunit HslV
gi|91685420|gb|ABE28620.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Burkholderia xenovorans LB400]
gi|295888382|gb|EFG68193.1| 20S proteasome A and B subunits [Burkholderia sp. Ch1-1]
Length = 178
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVMVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AA+AL +T+ S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALADNTELSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|304392728|ref|ZP_07374668.1| ATP-dependent protease HslVU, peptidase subunit [Ahrensia sp.
R2A130]
gi|303295358|gb|EFL89718.1| ATP-dependent protease HslVU, peptidase subunit [Ahrensia sp.
R2A130]
Length = 188
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 130/186 (69%), Positives = 160/186 (86%), Gaps = 1/186 (0%)
Query: 2 VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAG 60
+ ++ + K+HATTI+ VRK G VV+AGDGQ S+GQTVMK+N++KVRR+GK G +IAG
Sbjct: 1 MAHENESWLPKVHATTIIMVRKGGQVVLAGDGQASMGQTVMKSNSKKVRRIGKDGKVIAG 60
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
FAGS+ADAFTLLERLE KLEQYP QL+R+SVELAKDWR D+YLR LEAM+L+ADK ++L
Sbjct: 61 FAGSTADAFTLLERLEGKLEQYPGQLMRASVELAKDWRTDRYLRKLEAMMLVADKEVSLC 120
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
+TG+GDV EPE+GVMAIGSGG+YAL+AARAL T AE IARKAM+IAADICVYTNHN+
Sbjct: 121 LTGVGDVFEPEHGVMAIGSGGNYALAAARALYDTDADAETIARKAMTIAADICVYTNHNL 180
Query: 181 VLETLK 186
V+ET+
Sbjct: 181 VVETMD 186
>gi|87200648|ref|YP_497905.1| ATP-dependent protease peptidase subunit [Novosphingobium
aromaticivorans DSM 12444]
gi|87136329|gb|ABD27071.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Novosphingobium aromaticivorans DSM 12444]
Length = 185
Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats.
Identities = 112/179 (62%), Positives = 147/179 (82%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
H ++ H TTI+ V+K+G VIAGDGQVS+G TVMK NARKVRR+G G +IAGFAG++A
Sbjct: 7 SHGLIQWHGTTIIGVKKNGRTVIAGDGQVSMGNTVMKPNARKVRRIGDGKVIAGFAGATA 66
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ERLE+KLEQ+ QL+R++VELAKDWR DKYLRNLEA++++AD L++TG GD
Sbjct: 67 DAFTLFERLERKLEQHRGQLMRAAVELAKDWRTDKYLRNLEALMIVADADTMLILTGNGD 126
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE G+ AIGSGG+YAL+AA+AL ++ AE+IAR+AM +AA++CV+TN + LE +
Sbjct: 127 VLEPEGGIAAIGSGGNYALAAAKALGDYEDDAEKIARRAMQVAAEVCVFTNDRVTLEEI 185
>gi|16800385|ref|NP_470653.1| ATP-dependent protease peptidase subunit [Listeria innocua
Clip11262]
gi|21759185|sp|Q92C74|HSLV_LISIN RecName: Full=ATP-dependent protease subunit HslV
gi|16413790|emb|CAC96548.1| clpQ [Listeria innocua Clip11262]
gi|313619211|gb|EFR90976.1| ATP-dependent protease HslVU, peptidase subunit [Listeria innocua
FSL S4-378]
gi|313623984|gb|EFR94083.1| ATP-dependent protease HslVU, peptidase subunit [Listeria innocua
FSL J1-023]
Length = 179
Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats.
Identities = 96/179 (53%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V+ DG +AGDGQV+LG++V MK A+KVRRL +IAGFAGS ADAF
Sbjct: 1 MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R++VELA+ WR D LR LEAM+++ DK L+++G G+V+E
Sbjct: 61 TLFEKFEAKLNEYNGNLERAAVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGG+YAL+A RAL Q A++IAR A+ IA++ICV+TN +I +E L
Sbjct: 121 PDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIASEICVFTNDHITVEEL 179
>gi|88608110|ref|YP_506071.1| ATP-dependent protease peptidase subunit [Neorickettsia sennetsu
str. Miyayama]
gi|123492312|sp|Q2GEM5|HSLV_NEOSM RecName: Full=ATP-dependent protease subunit HslV
gi|88600279|gb|ABD45747.1| heat shock protein HslVU, HslV subunit [Neorickettsia sennetsu str.
Miyayama]
Length = 188
Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats.
Identities = 105/184 (57%), Positives = 136/184 (73%), Gaps = 3/184 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TTIL++RKD VV+ GDGQV++G V+K+ A+KV+RL G II+GFAGS+ADA
Sbjct: 2 GTGFHGTTILSIRKDDKVVMIGDGQVTMGNAVVVKSTAQKVKRLSNGKIISGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL ERLE KLE +P QLLR+ VELAKDWR DK+LR LEAM+++AD TL++ G GDV+
Sbjct: 62 FTLFERLESKLEAHPGQLLRACVELAKDWRTDKFLRRLEAMMIVADARGTLILNGAGDVI 121
Query: 129 EPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
EPE+ V AIGSGG+YAL+AA+AL ++ A +IA AM IAA ICV+TN N +E +
Sbjct: 122 EPEDSVAAIGSGGNYALAAAKALIVHASDLDAFQIAEAAMKIAAKICVFTNENFTVEVID 181
Query: 187 VGDE 190
+
Sbjct: 182 CASK 185
>gi|152988750|ref|YP_001351109.1| ATP-dependent protease peptidase subunit [Pseudomonas aeruginosa
PA7]
gi|166222989|sp|A6VDH4|HSLV_PSEA7 RecName: Full=ATP-dependent protease subunit HslV
gi|150963908|gb|ABR85933.1| heat shock protein HslV [Pseudomonas aeruginosa PA7]
Length = 182
Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats.
Identities = 95/175 (54%), Positives = 133/175 (76%), Gaps = 2/175 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER
Sbjct: 7 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 66
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E++LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 67 EQQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLI 126
Query: 136 AIGSGGSY--ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
A+GSGG + A + A + + SA E+A A++IA ICV+TN N+ +E L
Sbjct: 127 AMGSGGGFAQAAALALLQHNAELSAREVAETALNIAGSICVFTNQNLTIEELDSA 181
>gi|330813380|ref|YP_004357619.1| ATP-dependent protease HslV [Candidatus Pelagibacter sp. IMCC9063]
gi|327486475|gb|AEA80880.1| ATP-dependent protease HslV [Candidatus Pelagibacter sp. IMCC9063]
Length = 179
Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats.
Identities = 117/174 (67%), Positives = 145/174 (83%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTI VRKDG VVIAGDGQVS+G TVMK+ A+KVR++ K NIIAGFAGS+ADAFTL
Sbjct: 6 WHGTTIALVRKDGDVVIAGDGQVSIGNTVMKSTAKKVRKIEKRNIIAGFAGSTADAFTLF 65
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++ QL R++VELAKDWR DKYLR LEA++L+ADK + VITG GDVLEPE
Sbjct: 66 ERLESKLEKHGGQLTRAAVELAKDWRSDKYLRRLEALMLVADKDKSFVITGQGDVLEPEY 125
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV+AIGSGG+YAL+AARA++ +AEEIA++++ IA+DICV+TN+NI +E L
Sbjct: 126 GVVAIGSGGNYALAAARAMIDDKTKTAEEIAKRSIEIASDICVFTNNNITIEKL 179
>gi|116626380|ref|YP_828536.1| ATP-dependent protease peptidase subunit [Candidatus Solibacter
usitatus Ellin6076]
gi|122251635|sp|Q01Q19|HSLV_SOLUE RecName: Full=ATP-dependent protease subunit HslV
gi|116229542|gb|ABJ88251.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
family T01B [Candidatus Solibacter usitatus Ellin6076]
Length = 179
Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats.
Identities = 91/176 (51%), Positives = 129/176 (73%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TT++ VR+D VV+AGDGQV+LG V+K++ARK+RRL I+AGFAGS+ADAF L
Sbjct: 4 KIRSTTVICVRRDNKVVMAGDGQVTLGGEVLKSSARKLRRLYNDKILAGFAGSTADAFAL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
R E KLEQ+ L RS VELAK+WR D+ LR+LEA++L++D T +++G GDV+EP+
Sbjct: 64 FSRFESKLEQFNGNLSRSVVELAKEWRTDRVLRHLEALLLVSDTKSTYLVSGNGDVIEPD 123
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G++AIGSGG + +A L +T+ SA I ++M IA +IC+YTN N+ E L+
Sbjct: 124 EGIVAIGSGGPFATAAATALLRNTKLSARRIVEESMKIAGEICIYTNQNVTFEELE 179
>gi|160872089|ref|ZP_02062221.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Rickettsiella grylli]
gi|159120888|gb|EDP46226.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Rickettsiella grylli]
Length = 185
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 99/176 (56%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+H TTIL VR++ VVI GDGQV+LG V+K NARKVR+L G ++ GFAG++ADAFTL
Sbjct: 4 LHGTTILLVRRNDKVVIGGDGQVTLGNAIVLKGNARKVRKLYDGQVLVGFAGATADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ER E KL++ +L R+SVELAKDWR D+ LR LEAM+ +ADK + +++G GDV+EPE
Sbjct: 64 IERFENKLKECNGRLDRASVELAKDWRSDRVLRRLEAMLAVADKEKSFMLSGNGDVIEPE 123
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ ++AIGSGG+YA SAA AL +T+ SA I K++ IAADICV+TNH +E +
Sbjct: 124 HDLIAIGSGGAYAQSAALALFQNTKLSARSIVEKSLMIAADICVFTNHQRSIEEID 179
>gi|89902205|ref|YP_524676.1| ATP-dependent protease peptidase subunit [Rhodoferax ferrireducens
T118]
gi|122478440|sp|Q21SV8|HSLV_RHOFD RecName: Full=ATP-dependent protease subunit HslV
gi|89346942|gb|ABD71145.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Rhodoferax ferrireducens T118]
Length = 182
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 95/179 (53%), Positives = 128/179 (71%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTI++VR+ V I GDGQV+LG V+K ARKVR+L G ++AGFAG++AD
Sbjct: 3 QFHGTTIISVRRKTPEGYSVAIGGDGQVTLGNIVVKGTARKVRKLYHGKVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ L+R+++EL KDWR D+ LR LEAM+ +AD +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGHLVRAAIELTKDWRTDRVLRRLEAMLAVADSEASLIITGNGDV 122
Query: 128 LEPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPENG++ IGSGG +A L T+ SA EI +K++ IAA+IC+YTN + +ETL
Sbjct: 123 LEPENGIVTIGSGGAYAQAAAMALLNHTEMSAPEIVKKSLEIAAEICIYTNMSHTIETL 181
>gi|325525687|gb|EGD03447.1| ATP-dependent protease subunit HslV [Burkholderia sp. TJI49]
Length = 178
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 99/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ S +I K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTELSPRDIVEKSLEIAGDMCIYTNHNRIIETIE 178
>gi|116328184|ref|YP_797904.1| ATP-dependent protease peptidase subunit [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116330908|ref|YP_800626.1| ATP-dependent protease peptidase subunit [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|47605711|sp|Q8GQU1|HSLV_LEPBO RecName: Full=ATP-dependent protease subunit HslV
gi|122281339|sp|Q04TA2|HSLV_LEPBJ RecName: Full=ATP-dependent protease subunit HslV
gi|122284025|sp|Q051M4|HSLV_LEPBL RecName: Full=ATP-dependent protease subunit HslV
gi|25814818|gb|AAN75635.1|AF270500_1 HlsV [Leptospira borgpetersenii]
gi|116120928|gb|ABJ78971.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116124597|gb|ABJ75868.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
Length = 180
Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats.
Identities = 101/175 (57%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TTIL VRK G V I GDGQVS+G TVMK A+K+RRL G I++GFAGS+ADAFTL
Sbjct: 5 KIRSTTILCVRKSGKVAIGGDGQVSMGNTVMKNTAKKIRRLYDGKILSGFAGSAADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E EKK++++ L RS+VELA++WR D+ LR LEA++++ADK + +I+G GDV+ P+
Sbjct: 65 FELFEKKVQEFGGSLSRSAVELAREWRTDRMLRKLEALLIVADKEESFLISGTGDVISPD 124
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV+AIGSGGSYAL+AA+AL T SA EI +M IAA+IC+YTN +I LE +
Sbjct: 125 EGVIAIGSGGSYALAAAKALYDHTDLSAREIVESSMKIAANICIYTNDHITLEEI 179
>gi|56964040|ref|YP_175771.1| ATP-dependent protease peptidase subunit [Bacillus clausii KSM-K16]
gi|85542195|sp|Q5WFQ0|HSLV_BACSK RecName: Full=ATP-dependent protease subunit HslV
gi|56910283|dbj|BAD64810.1| ATP-dependent protease HslVU (ClpYQ) peptidase subunit [Bacillus
clausii KSM-K16]
Length = 181
Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats.
Identities = 99/177 (55%), Positives = 126/177 (71%), Gaps = 3/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
HATTI + +G +AGDGQV+ G VMK ARKVRRL N++AGFAGS ADAFT
Sbjct: 3 GFHATTIFAIAHNGGFAMAGDGQVTFGNAVVMKHTARKVRRLYHNNVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KLE+Y L R+SVELAK+WR D+ LR LEAM+++ DK L+I+G G+V++P
Sbjct: 63 LFEKFEAKLEEYNGNLQRASVELAKEWRSDRVLRKLEAMLIVMDKQALLLISGTGEVIQP 122
Query: 131 ENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YALSA RAL SA EIA A+ A +ICVYTN IV+E L
Sbjct: 123 DDGILAIGSGGNYALSAGRALKRHAPGLSAREIAVAALETAGEICVYTNDQIVVEEL 179
>gi|257471628|ref|ZP_05635627.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
LSR1 (Acyrthosiphon pisum)]
Length = 176
Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats.
Identities = 98/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR VVI GDGQ +LG T+MK+N +K+R L +IAGFAG +ADAFTL E
Sbjct: 2 TTILSVRLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
+KKL Y QL R+++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PEN ++
Sbjct: 62 DKKLAMYQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGGSYA S+ARAL+ +T A +I RK+++IAA+IC+YTNHN ++ L
Sbjct: 122 AIGSGGSYAQSSARALIENTNLDANQIVRKSLNIAANICIYTNHNFTIKEL 172
>gi|307728178|ref|YP_003905402.1| 20S proteasome A and subunit Bs [Burkholderia sp. CCGE1003]
gi|307582713|gb|ADN56111.1| 20S proteasome A and B subunits [Burkholderia sp. CCGE1003]
Length = 178
Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDQVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AA+AL +T S EI K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALADNTALSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178
>gi|16803318|ref|NP_464803.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
EGD-e]
gi|46907505|ref|YP_013894.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
serotype 4b str. F2365]
gi|47097539|ref|ZP_00235076.1| ATP-dependent protease HslV [Listeria monocytogenes str. 1/2a
F6854]
gi|116872711|ref|YP_849492.1| ATP-dependent protease peptidase subunit [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|217964579|ref|YP_002350257.1| ATP-dependent protease HslV [Listeria monocytogenes HCC23]
gi|224499051|ref|ZP_03667400.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
Finland 1988]
gi|226223881|ref|YP_002757988.1| beta-type subunit of the 20S proteasome [Listeria monocytogenes
Clip81459]
gi|254824661|ref|ZP_05229662.1| ATP-dependent protease hslV [Listeria monocytogenes FSL J1-194]
gi|254828641|ref|ZP_05233328.1| ATP-dependent protease hslV [Listeria monocytogenes FSL N3-165]
gi|254829965|ref|ZP_05234620.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
10403S]
gi|254852668|ref|ZP_05242016.1| clpQ [Listeria monocytogenes FSL R2-503]
gi|254898557|ref|ZP_05258481.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
J0161]
gi|254911952|ref|ZP_05261964.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
J2818]
gi|254932405|ref|ZP_05265764.1| hslV [Listeria monocytogenes HPB2262]
gi|254936279|ref|ZP_05267976.1| hslV [Listeria monocytogenes F6900]
gi|254994003|ref|ZP_05276193.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
FSL J2-064]
gi|255016910|ref|ZP_05289036.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
FSL F2-515]
gi|255026830|ref|ZP_05298816.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
FSL J2-003]
gi|255520260|ref|ZP_05387497.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
FSL J1-175]
gi|284801663|ref|YP_003413528.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
08-5578]
gi|284994805|ref|YP_003416573.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
08-5923]
gi|290894168|ref|ZP_06557139.1| hslV protein [Listeria monocytogenes FSL J2-071]
gi|300765314|ref|ZP_07075298.1| ATP-dependent protease HslV [Listeria monocytogenes FSL N1-017]
gi|315282102|ref|ZP_07870588.1| ATP-dependent protease HslVU, peptidase subunit [Listeria marthii
FSL S4-120]
gi|21759170|sp|Q8Y7J9|HSLV_LISMO RecName: Full=ATP-dependent protease subunit HslV
gi|85542204|sp|Q720E3|HSLV_LISMF RecName: Full=ATP-dependent protease subunit HslV
gi|123463736|sp|A0AI81|HSLV_LISW6 RecName: Full=ATP-dependent protease subunit HslV
gi|254802416|sp|B8DG53|HSLV_LISMH RecName: Full=ATP-dependent protease subunit HslV
gi|259491393|sp|C1L2I6|HSLV_LISMC RecName: Full=ATP-dependent protease subunit HslV
gi|16410694|emb|CAC99356.1| clpQ [Listeria monocytogenes EGD-e]
gi|46880773|gb|AAT04071.1| ATP-dependent protease HslV [Listeria monocytogenes serotype 4b
str. F2365]
gi|47014087|gb|EAL05083.1| ATP-dependent protease HslV [Listeria monocytogenes str. 1/2a
F6854]
gi|116741589|emb|CAK20713.1| ATP-dependent protease [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|217333849|gb|ACK39643.1| ATP-dependent protease HslV [Listeria monocytogenes HCC23]
gi|225876343|emb|CAS05052.1| Putative beta-type subunit of the 20S proteasome [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258601040|gb|EEW14365.1| ATP-dependent protease hslV [Listeria monocytogenes FSL N3-165]
gi|258605986|gb|EEW18594.1| clpQ [Listeria monocytogenes FSL R2-503]
gi|258608868|gb|EEW21476.1| hslV [Listeria monocytogenes F6900]
gi|284057225|gb|ADB68166.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
08-5578]
gi|284060272|gb|ADB71211.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
08-5923]
gi|290556298|gb|EFD89841.1| hslV protein [Listeria monocytogenes FSL J2-071]
gi|293583962|gb|EFF95994.1| hslV [Listeria monocytogenes HPB2262]
gi|293589914|gb|EFF98248.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
J2818]
gi|293593900|gb|EFG01661.1| ATP-dependent protease hslV [Listeria monocytogenes FSL J1-194]
gi|300513997|gb|EFK41060.1| ATP-dependent protease HslV [Listeria monocytogenes FSL N1-017]
gi|307570857|emb|CAR84036.1| ATP-dependent Clp protease, peptidase subunit [Listeria
monocytogenes L99]
gi|313609075|gb|EFR84789.1| ATP-dependent protease HslVU, peptidase subunit [Listeria
monocytogenes FSL F2-208]
gi|313614254|gb|EFR87912.1| ATP-dependent protease HslVU, peptidase subunit [Listeria marthii
FSL S4-120]
gi|313633458|gb|EFS00283.1| ATP-dependent protease HslVU, peptidase subunit [Listeria seeligeri
FSL N1-067]
gi|313638153|gb|EFS03410.1| ATP-dependent protease HslVU, peptidase subunit [Listeria seeligeri
FSL S4-171]
gi|328468567|gb|EGF39567.1| ATP-dependent protease subunit HslV [Listeria monocytogenes 1816]
gi|328475122|gb|EGF45906.1| ATP-dependent protease subunit HslV [Listeria monocytogenes 220]
gi|332311723|gb|EGJ24818.1| ATP-dependent protease subunit HslV [Listeria monocytogenes str.
Scott A]
Length = 179
Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats.
Identities = 97/179 (54%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V+ DG +AGDGQV+LG++V MK A+KVRRL +IAGFAGS ADAF
Sbjct: 1 MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R+SVELA+ WR D LR LEAM+++ DK L+++G G+V+E
Sbjct: 61 TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGG+YAL+A RAL Q A++IAR A+ IA++ICV+TN +I +E L
Sbjct: 121 PDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIASEICVFTNDHITVEEL 179
>gi|116249815|ref|YP_765653.1| ATP-dependent protease peptidase subunit [Rhizobium leguminosarum
bv. viciae 3841]
gi|189036232|sp|Q1MNB5|HSLV_RHIL3 RecName: Full=ATP-dependent protease subunit HslV
gi|115254463|emb|CAK05537.1| ATP-dependent protease hslV (EC 3.4.25.-) (Heat shock protein hslV)
[Rhizobium leguminosarum bv. viciae 3841]
Length = 175
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 133/173 (76%), Positives = 154/173 (89%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG ++AGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVVAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG++AL+AA ALM T SAEEIAR+A+ IAADICVYTNHN+V+E L
Sbjct: 122 AIGSGGNFALAAALALMDTDKSAEEIARRALDIAADICVYTNHNVVVELLDAE 174
>gi|170703230|ref|ZP_02894033.1| 20S proteasome A and B subunits [Burkholderia ambifaria IOP40-10]
gi|170131863|gb|EDT00388.1| 20S proteasome A and B subunits [Burkholderia ambifaria IOP40-10]
Length = 178
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ S EI K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTELSPREIVEKSLGIAGDMCIYTNHNRIIETIE 178
>gi|226946554|ref|YP_002801627.1| ATP-dependent protease peptidase subunit [Azotobacter vinelandii
DJ]
gi|226721481|gb|ACO80652.1| heat shock protein HslV [Azotobacter vinelandii DJ]
Length = 180
Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats.
Identities = 96/174 (55%), Positives = 131/174 (75%), Gaps = 1/174 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER
Sbjct: 7 TTIVSVRRQGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 66
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR ++ L LEAM+ +A+K +L+ITG GDV+EPE G++
Sbjct: 67 EGQLEKHQGHLVRAAVELAKDWRTERSLSRLEAMLAVANKDASLIITGNGDVVEPEEGLI 126
Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
A+GSGG Y +A L+ T SA E+A A++IA ICV+TN N+ +E L +
Sbjct: 127 AMGSGGPYAQAAAKALLLHTGLSAREVAETALNIAGSICVFTNQNLTIEELDLD 180
>gi|90408770|ref|ZP_01216915.1| ATP-dependent protease peptidase subunit [Psychromonas sp. CNPT3]
gi|90310114|gb|EAS38254.1| ATP-dependent protease peptidase subunit [Psychromonas sp. CNPT3]
Length = 179
Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats.
Identities = 97/174 (55%), Positives = 127/174 (72%), Gaps = 1/174 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VV+ GDGQVSLG TVMK+NARKV RL +IAGFAG +ADAFTLLER
Sbjct: 2 TTIVSVRRGNQVVVGGDGQVSLGNTVMKSNARKVHRLYNNQVIAGFAGGTADAFTLLERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL+ + L R++VELAKDWR DK LR LEA++ +AD + +ITG GDV+ PEN ++
Sbjct: 62 EAKLQAHQGNLERAAVELAKDWRTDKMLRRLEALLAVADAKHSYIITGNGDVIRPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG++A SAA AL+ +T A+ I KA++IA +ICV+TN +E +
Sbjct: 122 AIGSGGNFAQSAAMALLENTDLDAKTIVEKALTIAGNICVFTNTTQTIEVIDFE 175
>gi|289434562|ref|YP_003464434.1| ATP-dependent protease HslV/ClpQ [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289170806|emb|CBH27348.1| ATP-dependent protease HslV/ClpQ [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 181
Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats.
Identities = 97/179 (54%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V+ DG +AGDGQV+LG++V MK A+KVRRL +IAGFAGS ADAF
Sbjct: 3 MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R+SVELA+ WR D LR LEAM+++ DK L+++G G+V+E
Sbjct: 63 TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 122
Query: 130 PENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGG+YAL+A RAL Q A++IAR A+ IA++ICV+TN +I +E L
Sbjct: 123 PDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIASEICVFTNDHITVEEL 181
>gi|78043411|ref|YP_360611.1| ATP-dependent protease peptidase subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|123575920|sp|Q3AB73|HSLV_CARHZ RecName: Full=ATP-dependent protease subunit HslV
gi|77995526|gb|ABB14425.1| ATP-dependent protease HslV [Carboxydothermus hydrogenoformans
Z-2901]
Length = 179
Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 96/175 (54%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ V++ G V I GDGQV+ GQ TV+K A K+R+L +G ++AGFAG+ ADAFTL
Sbjct: 2 FEGTTIVAVKRGGEVAIGGDGQVTFGQQTVIKRRANKIRKLYRGKVLAGFAGAVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ EKKLE+ L R++VEL K WR DK+LR LEAM+L+AD+ L+I+G G+V+EP+
Sbjct: 62 FDLFEKKLEESQGNLTRAAVELVKTWRTDKFLRRLEAMLLVADRERILLISGTGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+GV+AIGSGG+YAL+AARAL+ T SA EI +++ IA +ICVYTN I +ET+
Sbjct: 122 DGVLAIGSGGNYALAAARALINHTNLSAREIVMESLKIAQEICVYTNDFITVETI 176
>gi|167561104|ref|ZP_02354020.1| ATP-dependent protease peptidase subunit [Burkholderia oklahomensis
EO147]
gi|167568323|ref|ZP_02361197.1| ATP-dependent protease peptidase subunit [Burkholderia oklahomensis
C6786]
Length = 178
Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 98/176 (55%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ ++ GFAG +ADAF+L
Sbjct: 3 QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+ E KLE++ L R++VELAKDWR D+ LR LEAM++ AD + TLVITG GDVL+PE
Sbjct: 63 LDLFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADASTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T S +I KA+ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTDLSPRDIVEKALEIAGDMCIYTNHNRIIETIE 178
>gi|198284454|ref|YP_002220775.1| ATP-dependent protease peptidase subunit [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|198248975|gb|ACH84568.1| 20S proteasome A and B subunits [Acidithiobacillus ferrooxidans
ATCC 53993]
Length = 179
Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 103/178 (57%), Positives = 138/178 (77%), Gaps = 2/178 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ +MH TTIL VR+ VV+AGDGQV+ G TVMK NARKVRR+ G ++ GFAG++ADA
Sbjct: 3 DSQQMHGTTILCVRRGANVVMAGDGQVTFGNTVMKGNARKVRRIDPG-VLTGFAGATADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTLLER E KL+ +P QL +++VELAK+WR D+ LR LEAM+ +AD +L+I+G GDVL
Sbjct: 62 FTLLERFEAKLKAHPGQLAKAAVELAKEWRTDRVLRRLEAMLAVADDKQSLIISGQGDVL 121
Query: 129 EPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+PE G++AIGSGG YAL+AARAL+ ++ A E+A++A+ IA DIC+YTNH +E L
Sbjct: 122 DPEYGIIAIGSGGPYALAAARALLENSDLPAREVAKRALGIAGDICIYTNHQHTIEEL 179
>gi|82750854|ref|YP_416595.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
RF122]
gi|123549065|sp|Q2YXL5|HSLV_STAAB RecName: Full=ATP-dependent protease subunit HslV
gi|82656385|emb|CAI80804.1| ATP-dependent protease heat shock protein [Staphylococcus aureus
RF122]
Length = 181
Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 102/176 (57%), Positives = 135/176 (76%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 6 LHATTIYAVRHNGKAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 66 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPD 125
Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL SAEE+A +++ +AADICV+TN NIV+ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKHHASHLSAEEMAYESLKVAADICVFTNDNIVVETL 181
>gi|323705452|ref|ZP_08117027.1| 20S proteasome, A and B subunits [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323535354|gb|EGB25130.1| 20S proteasome, A and B subunits [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 176
Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats.
Identities = 96/175 (54%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ VR+ V IAGDGQV+ G T++K A+K+RRL ++ GFAGS ADAFTL
Sbjct: 2 FKGTTIVAVRRGNKVSIAGDGQVTFGENTILKHGAKKIRRLYNDEVLVGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E+KLEQY L R++VELA++WR DK L+ LEA+++ ADK +TLVI+G G+V+EP+
Sbjct: 62 SEMFEEKLEQYSGNLKRAAVELAQEWRKDKILKKLEALLIAADKNVTLVISGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
N V+AIGSGG++A+SAA AL +T +EIARK++ IA+ ICVYTN +I +E+L
Sbjct: 122 NDVIAIGSGGNFAMSAALALRYNTDLPVDEIARKSLEIASQICVYTNDHITVESL 176
>gi|224501777|ref|ZP_03670084.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
FSL R2-561]
Length = 179
Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats.
Identities = 98/179 (54%), Positives = 133/179 (74%), Gaps = 4/179 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V+ DG +AGDGQV+LG++V MK A+KVRRL +IAGFAGS ADAF
Sbjct: 1 MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R+SVELA+ WR D LR LEAM+++ DK L+++G G+V+E
Sbjct: 61 TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P+NG++AIGSGG+YAL+A RAL Q A++IAR A+ IA++ICV+TN +I +E L
Sbjct: 121 PDNGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIASEICVFTNDHITVEEL 179
>gi|23099004|ref|NP_692470.1| ATP-dependent protease peptidase subunit [Oceanobacillus iheyensis
HTE831]
gi|47605697|sp|Q8CXH2|HSLV_OCEIH RecName: Full=ATP-dependent protease subunit HslV
gi|22777232|dbj|BAC13505.1| ATP-dependent protease (heat shock protein HslV) [Oceanobacillus
iheyensis HTE831]
Length = 181
Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats.
Identities = 94/179 (52%), Positives = 130/179 (72%), Gaps = 3/179 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
++MHATTI V+ G + GDGQV+LG +V MK A+KVR L G ++AGFAGS ADAF
Sbjct: 3 MEMHATTIFAVQHQGQSAMCGDGQVTLGNSVVMKHKAKKVRTLYNGKVLAGFAGSVADAF 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL+ + L R+SVELA++WR DK LR LEAM+++ +K +++G G+V+E
Sbjct: 63 TLFEKFETKLQSFNGNLTRASVELAQEWRSDKVLRKLEAMLIVMNKEHMYLVSGTGEVIE 122
Query: 130 PENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P++G++AIGSGG+YALSA RAL+ SA +IAR A+ +A +ICV+TN I LE L+
Sbjct: 123 PDDGILAIGSGGNYALSAGRALVRYADNMSAADIARSALEVAGEICVFTNDQITLEVLE 181
>gi|320528984|ref|ZP_08030076.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
artemidis F0399]
gi|320138614|gb|EFW30504.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
artemidis F0399]
Length = 179
Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats.
Identities = 99/178 (55%), Positives = 129/178 (72%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ HATTI+ V+K V IAGDGQV+ G+ +MKA ARKVRRL G I+AGFAGS ADAF
Sbjct: 1 MTFHATTIVAVKKGNKVAIAGDGQVTFGERAIMKATARKVRRLYHGKILAGFAGSVADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE Y L R++VELAKDWR DK LR LEA++L+ADK L+I+G G+V+E
Sbjct: 61 TLFEKFEAKLESYSGNLQRAAVELAKDWRTDKVLRKLEALLLVADKDGILMISGNGEVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P+ AIGSGG + +A ++ + A +A++++SIAADICVYTNHNI +E L+
Sbjct: 121 PDGDCTAIGSGGFFALAAARALILHSDMDAPAVAKESLSIAADICVYTNHNITVEVLE 178
>gi|300024850|ref|YP_003757461.1| 20S proteasome A and subunit betas [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526671|gb|ADJ25140.1| 20S proteasome A and B subunits [Hyphomicrobium denitrificans ATCC
51888]
Length = 190
Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats.
Identities = 132/187 (70%), Positives = 152/187 (81%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M + HATTILTVRKDG VV+AGDGQVSLGQTV+K+NARKVRRLGKG++I G
Sbjct: 1 MTHETQNSGSSSWHATTILTVRKDGKVVVAGDGQVSLGQTVIKSNARKVRRLGKGDVIGG 60
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
FAG++ADAFTL ERLE KLEQYP QL R+ VELAKDWR D+YLR LEAM+++AD T TLV
Sbjct: 61 FAGATADAFTLFERLEAKLEQYPGQLTRACVELAKDWRTDRYLRRLEAMMIVADATTTLV 120
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
+TG GDVLEPEN + IGSGG+YAL+AARAL+ AE IARKAMSIAA+ICVYTN NI
Sbjct: 121 LTGTGDVLEPENAIAGIGSGGNYALAAARALLDQPLDAEAIARKAMSIAAEICVYTNSNI 180
Query: 181 VLETLKV 187
V+ETL
Sbjct: 181 VVETLDA 187
>gi|229544387|ref|ZP_04433445.1| 20S proteasome A and B subunits [Bacillus coagulans 36D1]
gi|229324872|gb|EEN90549.1| 20S proteasome A and B subunits [Bacillus coagulans 36D1]
Length = 180
Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats.
Identities = 96/177 (54%), Positives = 132/177 (74%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI +R +G +AGDGQV+LG +V MK A+KVRRL G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAIRHNGKSAMAGDGQVTLGNSVVMKNTAKKVRRLFNGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KL++Y L R++VELAK WR DK LR LEAM+++ D+ L+++G G+V+EP+
Sbjct: 64 SEMFEGKLQEYNGNLTRAAVELAKMWRSDKVLRKLEAMLIVMDENNLLLVSGTGEVIEPD 123
Query: 132 NGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YAL+A RAL +A+EIAR ++ IA++ICV+TN NI++E L
Sbjct: 124 DGILAIGSGGNYALAAGRALKRHAAENFTAKEIARASLEIASEICVFTNSNIIVEEL 180
>gi|205354332|ref|YP_002228133.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|238065937|sp|B5RF79|HSLV_SALG2 RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Heat shock protein HslV
gi|205274113|emb|CAR39122.1| heat shock protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|326629457|gb|EGE35800.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9]
Length = 176
Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats.
Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA +AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 AIGSGGPYARAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 172
>gi|88813055|ref|ZP_01128297.1| ATP-dependent protease peptidase subunit [Nitrococcus mobilis
Nb-231]
gi|88789688|gb|EAR20813.1| ATP-dependent protease peptidase subunit [Nitrococcus mobilis
Nb-231]
Length = 180
Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats.
Identities = 98/178 (55%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI+ +R++G V+ GDGQV+LG TVMK NARKVRRL G+I+AGFAG +ADAFTL
Sbjct: 3 QFQGTTIIALRRNGRAVVGGDGQVTLGDTVMKGNARKVRRLFHGHILAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E +LE++ L R++VE+AKDWR D+ LR LEA++++A+ L+++G GDV+EPE
Sbjct: 63 FERFEGQLEKHRGNLTRAAVEMAKDWRSDRVLRRLEALLVVANTESLLMLSGNGDVVEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+ ++AIGSGG+YA +AA AL+ +TQ SA EI ++++IAADIC+YTNH++ +E L G
Sbjct: 123 HDLIAIGSGGAYAQAAATALLENTQLSAREIVERSLNIAADICIYTNHHLAIEELGAG 180
>gi|292670830|ref|ZP_06604256.1| heat shock protein HslVU [Selenomonas noxia ATCC 43541]
gi|292647451|gb|EFF65423.1| heat shock protein HslVU [Selenomonas noxia ATCC 43541]
Length = 182
Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats.
Identities = 100/178 (56%), Positives = 129/178 (72%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ HATTI+ V+K V +AGDGQV+ G+ +MKANARKVRRL G I+AGFAGS ADAF
Sbjct: 4 MIFHATTIVAVKKGNKVAVAGDGQVTFGERAIMKANARKVRRLYHGKILAGFAGSVADAF 63
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE Y L R++VELAKDWR DK LR LEA++L+AD++ L+I+G G+V+E
Sbjct: 64 TLFEKFEVKLESYSGNLQRAAVELAKDWRTDKILRKLEALLLVADQSSILMISGNGEVIE 123
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P+ AIGSGG + +A + A IA++A+SIAADICVYTNHNI +E L+
Sbjct: 124 PDGDCTAIGSGGFFALAAARALTAHSDMDASAIAKEALSIAADICVYTNHNITVEVLE 181
>gi|329900880|ref|ZP_08272629.1| ATP-dependent protease HslV [Oxalobacteraceae bacterium IMCC9480]
gi|327549353|gb|EGF33924.1| ATP-dependent protease HslV [Oxalobacteraceae bacterium IMCC9480]
Length = 178
Score = 276 bits (708), Expect = 7e-73, Method: Composition-based stats.
Identities = 102/176 (57%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTIL+VR+ +V + GDGQV+LG VMK ARKVR+L G ++AGFAG +ADAFTL
Sbjct: 3 QFHGTTILSVRRGKLVALGGDGQVTLGNIVMKGTARKVRKLYNGKVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+E E KLE+Y L+R+SVELAK+WR D+ LR LEAM+L+AD TLVITG GDVLEPE
Sbjct: 63 IELFEAKLEKYQGNLMRASVELAKNWRTDRMLRRLEAMLLVADHETTLVITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G+ AIGSGG++A SAA+AL +T+ S +I RK+++IA ++C+YTN + +ETL+
Sbjct: 123 DGIGAIGSGGAFAQSAAKALQENTELSPADIVRKSLTIAGELCIYTNLSHTIETLE 178
>gi|15600246|ref|NP_253740.1| ATP-dependent protease peptidase subunit [Pseudomonas aeruginosa
PAO1]
gi|116053201|ref|YP_793522.1| ATP-dependent protease peptidase subunit [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218894152|ref|YP_002443021.1| ATP-dependent protease peptidase subunit [Pseudomonas aeruginosa
LESB58]
gi|254238240|ref|ZP_04931563.1| heat shock protein HslV [Pseudomonas aeruginosa C3719]
gi|254244065|ref|ZP_04937387.1| heat shock protein HslV [Pseudomonas aeruginosa 2192]
gi|296391900|ref|ZP_06881375.1| ATP-dependent protease peptidase subunit [Pseudomonas aeruginosa
PAb1]
gi|313110091|ref|ZP_07795993.1| heat shock protein HslV [Pseudomonas aeruginosa 39016]
gi|21759208|sp|Q9HUC6|HSLV_PSEAE RecName: Full=ATP-dependent protease subunit HslV
gi|122256784|sp|Q02EW4|HSLV_PSEAB RecName: Full=ATP-dependent protease subunit HslV
gi|226704546|sp|B7V3E6|HSLV_PSEA8 RecName: Full=ATP-dependent protease subunit HslV
gi|9951344|gb|AAG08438.1|AE004918_8 heat shock protein HslV [Pseudomonas aeruginosa PAO1]
gi|115588422|gb|ABJ14437.1| heat shock protein HslV [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170171|gb|EAZ55682.1| heat shock protein HslV [Pseudomonas aeruginosa C3719]
gi|126197443|gb|EAZ61506.1| heat shock protein HslV [Pseudomonas aeruginosa 2192]
gi|218774380|emb|CAW30197.1| heat shock protein HslV [Pseudomonas aeruginosa LESB58]
gi|310882495|gb|EFQ41089.1| heat shock protein HslV [Pseudomonas aeruginosa 39016]
Length = 177
Score = 276 bits (708), Expect = 7e-73, Method: Composition-based stats.
Identities = 95/175 (54%), Positives = 133/175 (76%), Gaps = 2/175 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E++LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EQQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLI 121
Query: 136 AIGSGGSY--ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
A+GSGG + A + A + + SA E+A A++IA ICV+TN N+ +E L
Sbjct: 122 AMGSGGGFAQAAALALLQHNAELSAREVAETALNIAGSICVFTNQNLTIEELDSA 176
>gi|332981425|ref|YP_004462866.1| ATP dependent peptidase CodWX, CodW component [Mahella
australiensis 50-1 BON]
gi|332699103|gb|AEE96044.1| ATP dependent peptidase CodWX, CodW component [Mahella
australiensis 50-1 BON]
Length = 176
Score = 276 bits (708), Expect = 7e-73, Method: Composition-based stats.
Identities = 98/175 (56%), Positives = 132/175 (75%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI+ V+KDG +AGDGQV++G TVMK +A+KVRR+ ++ GFAGS ADAFTL
Sbjct: 2 LKGTTIVAVKKDGKTAVAGDGQVTMGENTVMKHHAKKVRRIYNNEVVIGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+Q+ LLR++VELA+DWR DK +R LEA+++ ADK LVI+G G+V+EP+
Sbjct: 62 SERFEDKLQQHSGNLLRAAVELAQDWRSDKVMRKLEALMIAADKERMLVISGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG YAL+A RAL+ +T SA +IA KA+ IA+ IC+YTN NI +E +
Sbjct: 122 DNVAAIGSGGPYALAAGRALVNNTDLSASDIAYKALEIASSICIYTNTNITVEEV 176
>gi|317050676|ref|YP_004111792.1| 20S proteasome subunits A/B [Desulfurispirillum indicum S5]
gi|316945760|gb|ADU65236.1| 20S proteasome A and B subunits [Desulfurispirillum indicum S5]
Length = 175
Score = 276 bits (708), Expect = 7e-73, Method: Composition-based stats.
Identities = 99/174 (56%), Positives = 137/174 (78%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI+ VR+DG V + GDGQV+LG TVMKA A+KVR L G +I+GFAGS+ADAF L
Sbjct: 2 FKGTTIVCVRRDGRVALGGDGQVTLGNTVMKATAKKVRTLADGAVISGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E KL+++ N L R++VE+AKDWR D+ LR LEAM+++AD+ + +I+G GD++EPE+
Sbjct: 62 EKFEGKLKKHGNILTRAAVEMAKDWRSDRILRRLEAMLIVADRENSFIISGTGDIVEPED 121
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGGSYA++AARAL +T +A +IARK++ IAADIC+Y+N NI + L
Sbjct: 122 GILAIGSGGSYAMAAARALRENTDLTAVDIARKSLEIAADICIYSNRNITILEL 175
>gi|325295313|ref|YP_004281827.1| ATP-dependent protease hslV [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065761|gb|ADY73768.1| ATP-dependent protease hslV [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 177
Score = 276 bits (708), Expect = 7e-73, Method: Composition-based stats.
Identities = 106/177 (59%), Positives = 135/177 (76%), Gaps = 1/177 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ HATTI V +DG V +AGDGQV+LG T+ K ARKVR++ G ++ GFAGS ADAF
Sbjct: 1 MDFHATTICAVLRDGKVAMAGDGQVTLGNTIFKNGARKVRKIYGGRVLTGFAGSVADAFA 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LLER E KL+ Y LL+S+VELAKDWR D+ LR LEAM+L+ADKT L+I+G GDV+EP
Sbjct: 61 LLERFEDKLQTYSGNLLKSAVELAKDWRTDRVLRRLEAMLLVADKTKILLISGNGDVIEP 120
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ VMAIGSGG+YA +AA AL +T SA+EIA+K++ IA +ICVYTN NI++E L
Sbjct: 121 DIPVMAIGSGGAYAQAAATALYENTDLSAKEIAQKSLEIAGNICVYTNTNIIVEELD 177
>gi|213584972|ref|ZP_03366798.1| ATP-dependent protease peptidase subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E98-0664]
Length = 169
Score = 276 bits (708), Expect = 7e-73, Method: Composition-based stats.
Identities = 98/165 (59%), Positives = 128/165 (77%), Gaps = 1/165 (0%)
Query: 22 RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
R++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE
Sbjct: 1 RRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEM 60
Query: 82 YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
+ L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG
Sbjct: 61 HQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGG 120
Query: 142 SYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
YA +AARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 PYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 165
>gi|126724541|ref|ZP_01740384.1| ATP-dependent protease peptidase subunit [Rhodobacterales bacterium
HTCC2150]
gi|126705705|gb|EBA04795.1| ATP-dependent protease peptidase subunit [Rhodobacterales bacterium
HTCC2150]
Length = 189
Score = 276 bits (708), Expect = 7e-73, Method: Composition-based stats.
Identities = 117/185 (63%), Positives = 146/185 (78%), Gaps = 4/185 (2%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGF 61
M D+ H TTI+ V+KDG VVIAGDGQVSLG TV+K ARKVRRL G ++AGF
Sbjct: 6 MADEF--PGWHGTTIIGVKKDGHVVIAGDGQVSLGPTVIKGTARKVRRLKTGKSDVVAGF 63
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R++VELAKDWR DKYL+ LEAM+++ D L+I
Sbjct: 64 AGSTADAFTLLERLEAKLEATPGQLARAAVELAKDWRTDKYLQKLEAMLIVTDGKELLII 123
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AAR +M ++ SAE++AR+AM+IAADICVYTN +
Sbjct: 124 TGAGDVLEPEHNVAAIGSGGNFALAAARGMMESELSAEDVARRAMAIAADICVYTNGKLT 183
Query: 182 LETLK 186
+E++K
Sbjct: 184 VESIK 188
>gi|229597233|ref|YP_001747338.2| ATP-dependent protease peptidase subunit [Pseudomonas putida W619]
Length = 176
Score = 276 bits (708), Expect = 8e-73, Method: Composition-based stats.
Identities = 102/175 (58%), Positives = 140/175 (80%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYNGEVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +L+++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EAQLQKHSGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+GSGG+YA +AARAL++ T SA EIA A++IA DICV+TNHN+ +E + +
Sbjct: 122 AMGSGGAYAQAAARALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAE 176
>gi|296283399|ref|ZP_06861397.1| ATP-dependent protease peptidase subunit [Citromicrobium
bathyomarinum JL354]
Length = 185
Score = 276 bits (708), Expect = 8e-73, Method: Composition-based stats.
Identities = 111/185 (60%), Positives = 146/185 (78%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M H + H TTI+ V++ V+AGDGQVS+G TVMK NA+KVRR+G G ++AG
Sbjct: 1 MSNSAASHGLQQWHGTTIIGVKRGDKTVLAGDGQVSMGNTVMKPNAKKVRRIGDGKVVAG 60
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
FAG++ADAFTL ERLE+KL+QY QL+R++VELAKDWR DKYLRNLEA++++ADK LV
Sbjct: 61 FAGATADAFTLFERLERKLDQYSGQLMRAAVELAKDWRTDKYLRNLEALMIVADKDTMLV 120
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
+TG GDVLEPE G+ AIGSGG+YAL+AARAL + E+IAR+AM++AA++CV+TN +
Sbjct: 121 LTGNGDVLEPEGGIAAIGSGGNYALAAARALSDYETDPEKIARRAMAVAAEVCVFTNDQV 180
Query: 181 VLETL 185
LET+
Sbjct: 181 TLETV 185
>gi|28872253|ref|NP_794872.1| heat shock protein HslV [Pseudomonas syringae pv. tomato str.
DC3000]
gi|301382645|ref|ZP_07231063.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
tomato Max13]
gi|302060629|ref|ZP_07252170.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
tomato K40]
gi|302132700|ref|ZP_07258690.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|38257952|sp|Q87V01|HSLV_PSESM RecName: Full=ATP-dependent protease subunit HslV
gi|28855507|gb|AAO58567.1| heat shock protein HslV [Pseudomonas syringae pv. tomato str.
DC3000]
gi|330877950|gb|EGH12099.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330964751|gb|EGH65011.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|331016039|gb|EGH96095.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 176
Score = 276 bits (707), Expect = 9e-73, Method: Composition-based stats.
Identities = 101/175 (57%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E + D
Sbjct: 122 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEEQDLAD 176
>gi|302872577|ref|YP_003841213.1| 20S proteasome A and B subunits [Caldicellulosiruptor obsidiansis
OB47]
gi|302575436|gb|ADL43227.1| 20S proteasome A and B subunits [Caldicellulosiruptor obsidiansis
OB47]
Length = 176
Score = 276 bits (707), Expect = 9e-73, Method: Composition-based stats.
Identities = 98/175 (56%), Positives = 128/175 (73%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ +MK+ A+KVR+L G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGRVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++ADK V++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKDHLFVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ + AIGSGG YAL+AARAL +T SA EIA+KA+ IAA ICVYTN+NI + L
Sbjct: 122 DNIAAIGSGGPYALAAARALFQNTDLSAAEIAKKALEIAASICVYTNNNITVLEL 176
>gi|315302917|ref|ZP_07873650.1| ATP-dependent protease HslVU, peptidase subunit [Listeria ivanovii
FSL F6-596]
gi|313628713|gb|EFR97113.1| ATP-dependent protease HslVU, peptidase subunit [Listeria ivanovii
FSL F6-596]
Length = 181
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 97/179 (54%), Positives = 131/179 (73%), Gaps = 4/179 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V DG +AGDGQV+LG++V MK A+KVRRL +IAGFAGS ADAF
Sbjct: 3 MELHATTIFAVHHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R+SVELA+ WR D LR LEAM+++ DK L+++G G+V+E
Sbjct: 63 TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 122
Query: 130 PENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGG+YAL+A RAL Q A++IAR A+ IA++ICV+TN I +E L
Sbjct: 123 PDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIASEICVFTNDQITVEEL 181
>gi|313895640|ref|ZP_07829196.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas sp.
oral taxon 137 str. F0430]
gi|312975766|gb|EFR41225.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas sp.
oral taxon 137 str. F0430]
Length = 179
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 98/178 (55%), Positives = 128/178 (71%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ HATTI+ V+K V IAGDGQV+ G+ +MKA ARKVRRL G I+AGFAGS ADAF
Sbjct: 1 MTFHATTIVAVKKGNKVAIAGDGQVTFGERAIMKATARKVRRLYHGKILAGFAGSVADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE Y L R++VELAKDWR DK LR LEA++L+ADK L+I+G G+V+E
Sbjct: 61 TLFEKFEAKLESYSGNLQRAAVELAKDWRTDKVLRKLEALLLVADKDGILMISGNGEVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P+ AIGSGG + +A + + A +A+++++IAADICVYTNHNI +E L+
Sbjct: 121 PDGDCTAIGSGGFFALAAARALTLHSDMDAPAVAKESLAIAADICVYTNHNITVEVLE 178
>gi|242280397|ref|YP_002992526.1| ATP-dependent protease peptidase subunit [Desulfovibrio salexigens
DSM 2638]
gi|259491385|sp|C6C0P0|HSLV_DESAD RecName: Full=ATP-dependent protease subunit HslV
gi|242123291|gb|ACS80987.1| 20S proteasome A and B subunits [Desulfovibrio salexigens DSM 2638]
Length = 179
Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats.
Identities = 106/178 (59%), Positives = 137/178 (76%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
++M TTIL V+ D + GDGQV++GQ VMK +A KVR L +IAGFAG++ADAF
Sbjct: 1 MEMRGTTILAVKDDKGTAMIGDGQVTMGQAVVMKHSAVKVRTLYNDQVIAGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER EKKL+ Y L+RS+VE+A DWR DK+LR LEAMI++AD L+I+G GDV+E
Sbjct: 61 TLFERFEKKLKTYSGNLVRSAVEMATDWRTDKFLRKLEAMIMVADAEHILIISGNGDVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P++GV AIGSGGSYALSAARALM +T A +IA+K+M IA++ICVYTN + VL+TL+
Sbjct: 121 PDDGVAAIGSGGSYALSAARALMRNTDMPAADIAQKSMEIASEICVYTNDHFVLKTLE 178
>gi|83313635|ref|YP_423899.1| ATP-dependent protease peptidase subunit [Magnetospirillum
magneticum AMB-1]
gi|123540234|sp|Q2VYI5|HSLV_MAGSA RecName: Full=ATP-dependent protease subunit HslV
gi|82948476|dbj|BAE53340.1| ATP-dependent protease HslVU, peptidase subunit [Magnetospirillum
magneticum AMB-1]
Length = 182
Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats.
Identities = 119/180 (66%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+ H TTIL +RKDG VVIAGDGQVSLG TV+K NARKVR++G G+I+ GFAG++A
Sbjct: 3 ESSLPSWHGTTILCLRKDGRVVIAGDGQVSLGATVIKGNARKVRKVGGGSILVGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLE++P QL R+ VELAKDWR D+YLR LEAM+ +ADK ++LV+TG GD
Sbjct: 63 DAFTLLERLEAKLEKHPGQLTRACVELAKDWRTDRYLRRLEAMMAVADKDVSLVLTGQGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE+G++ IGSGG+YAL+AARAL+ AE IARKAM+IAA ICVYTN N+++E+L
Sbjct: 123 VLEPEDGIIGIGSGGNYALAAARALIDIDGLDAETIARKAMAIAAGICVYTNGNMIVESL 182
>gi|330951293|gb|EGH51553.1| ATP-dependent protease subunit HslV [Pseudomonas syringae Cit 7]
Length = 176
Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats.
Identities = 100/170 (58%), Positives = 130/170 (76%), Gaps = 1/170 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG+ ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGAPADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E
Sbjct: 122 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEE 171
>gi|15924243|ref|NP_371777.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus Mu50]
gi|15926836|ref|NP_374369.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus N315]
gi|21282865|ref|NP_645953.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus MW2]
gi|49483416|ref|YP_040640.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus MRSA252]
gi|49486092|ref|YP_043313.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57651822|ref|YP_186128.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus COL]
gi|87160493|ref|YP_493843.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|88194961|ref|YP_499761.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|148267743|ref|YP_001246686.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus JH9]
gi|150393801|ref|YP_001316476.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus JH1]
gi|151221375|ref|YP_001332197.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus str. Newman]
gi|156979574|ref|YP_001441833.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus Mu3]
gi|161509419|ref|YP_001575078.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|221142043|ref|ZP_03566536.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus str. JKD6009]
gi|253731872|ref|ZP_04866037.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253733509|ref|ZP_04867674.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus TCH130]
gi|255006040|ref|ZP_05144641.2| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus Mu50-omega]
gi|257425307|ref|ZP_05601732.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427968|ref|ZP_05604366.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257430601|ref|ZP_05606983.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
68-397]
gi|257433361|ref|ZP_05609719.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus E1410]
gi|257436203|ref|ZP_05612250.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus M876]
gi|257795691|ref|ZP_05644670.1| heat shock protein HslV [Staphylococcus aureus A9781]
gi|258415915|ref|ZP_05682185.1| heat shock protein HslV [Staphylococcus aureus A9763]
gi|258421677|ref|ZP_05684601.1| heat shock protein HslV [Staphylococcus aureus A9719]
gi|258423906|ref|ZP_05686791.1| heat shock protein HslVU [Staphylococcus aureus A9635]
gi|258434833|ref|ZP_05688907.1| heat shock protein HslV [Staphylococcus aureus A9299]
gi|258444591|ref|ZP_05692920.1| heat shock protein HslVU [Staphylococcus aureus A8115]
gi|258447576|ref|ZP_05695720.1| heat shock protein HslVU [Staphylococcus aureus A6300]
gi|258449418|ref|ZP_05697521.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
A6224]
gi|258452552|ref|ZP_05700558.1| heat shock protein HslV [Staphylococcus aureus A5948]
gi|258454797|ref|ZP_05702761.1| heat shock protein HslV [Staphylococcus aureus A5937]
gi|262048147|ref|ZP_06021034.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
D30]
gi|262051315|ref|ZP_06023538.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
930918-3]
gi|269202869|ref|YP_003282138.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus ED98]
gi|282892741|ref|ZP_06300976.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus A8117]
gi|282903808|ref|ZP_06311696.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus C160]
gi|282905571|ref|ZP_06313426.1| ATP-dependent HslUV protease peptidase subunit HslV [Staphylococcus
aureus subsp. aureus Btn1260]
gi|282908546|ref|ZP_06316376.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910825|ref|ZP_06318628.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914030|ref|ZP_06321817.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus M899]
gi|282916513|ref|ZP_06324271.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus subsp. aureus D139]
gi|282918952|ref|ZP_06326687.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
C427]
gi|282920497|ref|ZP_06328218.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus A9765]
gi|282924075|ref|ZP_06331751.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus subsp. aureus C101]
gi|282927595|ref|ZP_06335211.1| ATP-dependent protease hslV [Staphylococcus aureus A10102]
gi|283770317|ref|ZP_06343209.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
H19]
gi|284024246|ref|ZP_06378644.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus 132]
gi|293501062|ref|ZP_06666913.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus subsp. aureus 58-424]
gi|293510024|ref|ZP_06668732.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
M809]
gi|293526610|ref|ZP_06671295.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus M1015]
gi|294848248|ref|ZP_06788995.1| ATP-dependent HslUV protease [Staphylococcus aureus A9754]
gi|295406189|ref|ZP_06815996.1| ATP-dependent HslUV protease [Staphylococcus aureus A8819]
gi|295427740|ref|ZP_06820372.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|296274811|ref|ZP_06857318.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus MR1]
gi|297208101|ref|ZP_06924532.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297244417|ref|ZP_06928300.1| ATP-dependent protease hslV [Staphylococcus aureus A8796]
gi|297591302|ref|ZP_06949940.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
MN8]
gi|300912182|ref|ZP_07129625.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
TCH70]
gi|304381183|ref|ZP_07363836.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|54037329|sp|P65797|HSLV_STAAN RecName: Full=ATP-dependent protease subunit HslV
gi|54037330|sp|P65798|HSLV_STAAW RecName: Full=ATP-dependent protease subunit HslV
gi|54041541|sp|P65796|HSLV_STAAM RecName: Full=ATP-dependent protease subunit HslV
gi|56748979|sp|Q6G9W0|HSLV_STAAS RecName: Full=ATP-dependent protease subunit HslV
gi|56749033|sp|Q6GHI2|HSLV_STAAR RecName: Full=ATP-dependent protease subunit HslV
gi|71152139|sp|Q5HGH9|HSLV_STAAC RecName: Full=ATP-dependent protease subunit HslV
gi|122539695|sp|Q2FZ29|HSLV_STAA8 RecName: Full=ATP-dependent protease subunit HslV
gi|123486189|sp|Q2FHI5|HSLV_STAA3 RecName: Full=ATP-dependent protease subunit HslV
gi|166223003|sp|A7X1M9|HSLV_STAA1 RecName: Full=ATP-dependent protease subunit HslV
gi|172048863|sp|A6QGF3|HSLV_STAAE RecName: Full=ATP-dependent protease subunit HslV
gi|189036243|sp|A6U171|HSLV_STAA2 RecName: Full=ATP-dependent protease subunit HslV
gi|189036244|sp|A5ISD7|HSLV_STAA9 RecName: Full=ATP-dependent protease subunit HslV
gi|189036245|sp|A8Z3T3|HSLV_STAAT RecName: Full=ATP-dependent protease subunit HslV
gi|13701053|dbj|BAB42348.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus N315]
gi|14247023|dbj|BAB57415.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus Mu50]
gi|21204304|dbj|BAB95001.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus MW2]
gi|49241545|emb|CAG40231.1| putative ATP-dependent protease [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49244535|emb|CAG42964.1| putative ATP-dependent protease [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57286008|gb|AAW38102.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus COL]
gi|87126467|gb|ABD20981.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202519|gb|ABD30329.1| heat shock protein HslV, putative [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|147740812|gb|ABQ49110.1| 20S proteasome, A and B subunits [Staphylococcus aureus subsp.
aureus JH9]
gi|149946253|gb|ABR52189.1| 20S proteasome A and B subunits [Staphylococcus aureus subsp.
aureus JH1]
gi|150374175|dbj|BAF67435.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus str. Newman]
gi|156721709|dbj|BAF78126.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus Mu3]
gi|160368228|gb|ABX29199.1| T01 family HslV component of HsIUV peptidase [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|253724282|gb|EES93011.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253728563|gb|EES97292.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus TCH130]
gi|257271764|gb|EEV03902.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus
55/2053]
gi|257274809|gb|EEV06296.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257278729|gb|EEV09348.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
68-397]
gi|257281454|gb|EEV11591.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus E1410]
gi|257284485|gb|EEV14605.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus M876]
gi|257789663|gb|EEV28003.1| heat shock protein HslV [Staphylococcus aureus A9781]
gi|257839251|gb|EEV63725.1| heat shock protein HslV [Staphylococcus aureus A9763]
gi|257842363|gb|EEV66788.1| heat shock protein HslV [Staphylococcus aureus A9719]
gi|257845935|gb|EEV69964.1| heat shock protein HslVU [Staphylococcus aureus A9635]
gi|257849194|gb|EEV73176.1| heat shock protein HslV [Staphylococcus aureus A9299]
gi|257850084|gb|EEV74037.1| heat shock protein HslVU [Staphylococcus aureus A8115]
gi|257853767|gb|EEV76726.1| heat shock protein HslVU [Staphylococcus aureus A6300]
gi|257857406|gb|EEV80304.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
A6224]
gi|257859770|gb|EEV82612.1| heat shock protein HslV [Staphylococcus aureus A5948]
gi|257863180|gb|EEV85944.1| heat shock protein HslV [Staphylococcus aureus A5937]
gi|259160690|gb|EEW45711.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
930918-3]
gi|259163713|gb|EEW48268.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
D30]
gi|262075159|gb|ACY11132.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus ED98]
gi|269940744|emb|CBI49126.1| putative ATP-dependent protease [Staphylococcus aureus subsp.
aureus TW20]
gi|282314047|gb|EFB44439.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus subsp. aureus C101]
gi|282316762|gb|EFB47136.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
C427]
gi|282319000|gb|EFB49352.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus subsp. aureus D139]
gi|282322098|gb|EFB52422.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus M899]
gi|282325430|gb|EFB55739.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327608|gb|EFB57891.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282330863|gb|EFB60377.1| ATP-dependent HslUV protease peptidase subunit HslV [Staphylococcus
aureus subsp. aureus Btn1260]
gi|282590598|gb|EFB95675.1| ATP-dependent protease hslV [Staphylococcus aureus A10102]
gi|282594159|gb|EFB99146.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus A9765]
gi|282595426|gb|EFC00390.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus C160]
gi|282764738|gb|EFC04863.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus A8117]
gi|283460464|gb|EFC07554.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
H19]
gi|283470468|emb|CAQ49679.1| ATP-dependent protease HslV [Staphylococcus aureus subsp. aureus
ST398]
gi|285816935|gb|ADC37422.1| ATP-dependent protease HslV [Staphylococcus aureus 04-02981]
gi|290920682|gb|EFD97745.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus M1015]
gi|291096067|gb|EFE26328.1| ATP-dependent HslUV protease, peptidase subunit HslV
[Staphylococcus aureus subsp. aureus 58-424]
gi|291466968|gb|EFF09486.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
M809]
gi|294825048|gb|EFG41470.1| ATP-dependent HslUV protease [Staphylococcus aureus A9754]
gi|294968777|gb|EFG44799.1| ATP-dependent HslUV protease [Staphylococcus aureus A8819]
gi|295128098|gb|EFG57732.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|296887344|gb|EFH26246.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297178447|gb|EFH37693.1| ATP-dependent protease hslV [Staphylococcus aureus A8796]
gi|297576188|gb|EFH94904.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
MN8]
gi|298694545|gb|ADI97767.1| ATP-dependent protease heat shock protein [Staphylococcus aureus
subsp. aureus ED133]
gi|300886428|gb|EFK81630.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
TCH70]
gi|302332859|gb|ADL23052.1| T01 family HslV component of HsIUV peptidase [Staphylococcus aureus
subsp. aureus JKD6159]
gi|302751076|gb|ADL65253.1| T01 family HslV component of HsIUV peptidase [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|304340166|gb|EFM06107.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312438368|gb|ADQ77439.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
TCH60]
gi|312829647|emb|CBX34489.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315131046|gb|EFT87030.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus CGS03]
gi|315194140|gb|EFU24533.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus CGS00]
gi|315198493|gb|EFU28822.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
subsp. aureus CGS01]
gi|320140930|gb|EFW32777.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
aureus subsp. aureus MRSA131]
gi|320144354|gb|EFW36120.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
aureus subsp. aureus MRSA177]
gi|329313923|gb|AEB88336.1| ATP-dependent protease subunit HslV [Staphylococcus aureus subsp.
aureus T0131]
gi|329727322|gb|EGG63778.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
aureus subsp. aureus 21172]
gi|329727843|gb|EGG64294.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
aureus subsp. aureus 21189]
gi|329733602|gb|EGG69930.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
aureus subsp. aureus 21193]
Length = 181
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 102/176 (57%), Positives = 135/176 (76%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 6 LHATTIYAVRHNGKAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 66 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPD 125
Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL SAEE+A +++ +AADICV+TN NIV+ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKRHASHLSAEEMAYESLKVAADICVFTNDNIVVETL 181
>gi|225848446|ref|YP_002728609.1| ATP-dependent protease peptidase subunit [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643867|gb|ACN98917.1| ATP-dependent protease HslVU, peptidase subunit
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 178
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 97/176 (55%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TTIL VR++G V+AGDGQV+LG +VMK A+KVR+L +G ++ GFAGS+AD L
Sbjct: 3 KIRSTTILVVRRNGKTVMAGDGQVTLGSSVMKQTAKKVRKLNEGRVVVGFAGSAADGLAL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ERLE+KL ++ L+R+SVELAKDWR+DKYLR LEA+++ ADK L+++G GDV+EP+
Sbjct: 63 MERLEEKLNKHRGNLIRASVELAKDWRLDKYLRRLEAVMIAADKENILLLSGNGDVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
V+AIGSGG YA SAA AL +T A +I +AM IA +IC+YTN N ++E ++
Sbjct: 123 EPVLAIGSGGDYARSAALALYRNTDLDARKIVEEAMKIAGEICIYTNTNFIIEEIE 178
>gi|319892268|ref|YP_004149143.1| ATP-dependent protease HslV [Staphylococcus pseudintermedius
HKU10-03]
gi|317161964|gb|ADV05507.1| ATP-dependent protease HslV [Staphylococcus pseudintermedius
HKU10-03]
gi|323464635|gb|ADX76788.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
pseudintermedius ED99]
Length = 180
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 95/176 (53%), Positives = 130/176 (73%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LG+ V MK A+KVR+L G +IAGFAGS ADAFTL
Sbjct: 5 IHATTIYAVRHNGGAAMAGDGQVTLGEKVIMKQTAKKVRKLYNGKVIAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+QY L R++VELAK+WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 65 FEKFEAKLQQYSGNLERAAVELAKEWRGDKQLRQLEAMLIVMDKEHILVVSGTGEVIAPD 124
Query: 132 NGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG++ALSA RA SA E+A +++ +A+DICV+TN +I +E L
Sbjct: 125 DDLIAIGSGGNFALSAGRAFKRHASHLSAREMAYESLKVASDICVFTNDHITVEEL 180
>gi|327441061|dbj|BAK17426.1| ATP-dependent protease HslVU, peptidase subunit [Solibacillus
silvestris StLB046]
Length = 180
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 103/178 (57%), Positives = 132/178 (74%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
++HATTI + +G +AGDGQV+LG VMK ARKVRRL G ++AGFAGS ADAFT
Sbjct: 3 QIHATTIFAIHHNGECAMAGDGQVTLGNAVVMKHTARKVRRLFNGKVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KL +Y L R+SVE+AK WR DK LR LEAM+L+ DK+ L+++G G+V+EP
Sbjct: 63 LFEMFEAKLNEYNGNLQRASVEVAKQWRGDKMLRQLEAMLLVMDKSTLLLVSGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YALSA RAL SA+EIA A++ AADICV+TNHNI+LE L
Sbjct: 123 DDGILAIGSGGNYALSAGRALKKHAGDHLSAKEIAEAALTTAADICVFTNHNIILEVL 180
>gi|260220004|emb|CBA27108.1| ATP-dependent protease hslV [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 181
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 96/179 (53%), Positives = 133/179 (74%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ H TTI++VR+ V I GDGQV+LG V+K ARKVR+L G ++AGFAG++AD
Sbjct: 3 QFHGTTIISVRRQTPTGMQVAIGGDGQVTLGNIVIKGTARKVRKLYHGKVLAGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ER E KLE++ L+R+++EL KDWR D+ LR LEAM+ +ADK +L+ITG GDV
Sbjct: 63 AFTLFERFEAKLEKHQGHLVRAAIELTKDWRTDRVLRKLEAMLAVADKDASLIITGNGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
LEPENG++ IGSGG+YA +AA AL++ SA +I ++++ IA ++C+YTN N +ETL
Sbjct: 123 LEPENGIVTIGSGGAYAQAAAVALLNHSDLSAADIVKRSLEIAGELCIYTNMNHTIETL 181
>gi|94309076|ref|YP_582286.1| ATP-dependent protease peptidase subunit [Cupriavidus metallidurans
CH34]
gi|166222992|sp|Q1LS59|HSLV_RALME RecName: Full=ATP-dependent protease subunit HslV
gi|93352928|gb|ABF07017.1| peptidase component of the HslUV protease [Cupriavidus
metallidurans CH34]
Length = 178
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ G ++ GFAGS+ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRRIYNGKVLVGFAGSTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE+Y L R++V+LAKDWR D+ LR LEAM++ ADK TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKYQGNLTRAAVDLAKDWRSDRALRRLEAMLITADKDTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAA+AL+ +T+ +++ KA++IA ++C+YTN N V+ETL
Sbjct: 123 GGIAAIGSGGAYAQSAAKALVENTELPPKDVVEKALTIAGELCIYTNTNFVIETLD 178
>gi|325290381|ref|YP_004266562.1| ATP dependent peptidase CodWX, CodW component [Syntrophobotulus
glycolicus DSM 8271]
gi|324965782|gb|ADY56561.1| ATP dependent peptidase CodWX, CodW component [Syntrophobotulus
glycolicus DSM 8271]
Length = 176
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 93/175 (53%), Positives = 127/175 (72%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K+ V IAGDGQV+ GQ TVMK ARK+R+L G ++AGFAGS ADAFTL
Sbjct: 2 FHATTIVAVKKNNQVAIAGDGQVTFGQATVMKHGARKIRKLYHGKVVAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E +LE++ L R++VEL K+WR D+ LR+LEA++++ADK L+I+G G+V+EP+
Sbjct: 62 FEKFEGRLEEFHGNLQRAAVELVKEWRTDRMLRHLEALLIVADKERILIISGSGEVIEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ + AIGSGG+Y +A SA E+ R+A+ IAA ICVYTN NI +E L
Sbjct: 122 DDIAAIGSGGNYALAAARALARHADLSAGELVREALKIAASICVYTNENITVEEL 176
>gi|171060507|ref|YP_001792856.1| ATP-dependent protease peptidase subunit [Leptothrix cholodnii
SP-6]
gi|238065881|sp|B1Y6R3|HSLV_LEPCP RecName: Full=ATP-dependent protease subunit HslV
gi|170777952|gb|ACB36091.1| 20S proteasome A and B subunits [Leptothrix cholodnii SP-6]
Length = 178
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 92/175 (52%), Positives = 130/175 (74%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL+VR+ V + GDGQV+LG V+KA+ARKVRRL + ++AGFAG++ADAFTL
Sbjct: 4 FHGTTILSVRRGEQVAMGGDGQVTLGHIVVKASARKVRRLYREQVLAGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KLE++ L+R++VEL +DWR D+ LR LEAM+ +AD++ +L+ITG GDVLEPE
Sbjct: 64 ERFESKLEKHQGHLVRAAVELTRDWRTDRVLRRLEAMLAVADRSASLIITGNGDVLEPEY 123
Query: 133 GVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G++AIGSGG +A L T+ S +I ++++ IA D+C+YTN + +ETL+
Sbjct: 124 GIVAIGSGGAYAQAAARAMLQHTEQSPADIVKRSLEIAGDLCIYTNQSHTIETLE 178
>gi|261407989|ref|YP_003244230.1| ATP-dependent protease peptidase subunit [Paenibacillus sp.
Y412MC10]
gi|315648142|ref|ZP_07901243.1| ATP-dependent protease peptidase subunit [Paenibacillus vortex
V453]
gi|329929347|ref|ZP_08283100.1| ATP-dependent protease HslVU, peptidase subunit [Paenibacillus sp.
HGF5]
gi|261284452|gb|ACX66423.1| 20S proteasome A and B subunits [Paenibacillus sp. Y412MC10]
gi|315276788|gb|EFU40131.1| ATP-dependent protease peptidase subunit [Paenibacillus vortex
V453]
gi|328936716|gb|EGG33159.1| ATP-dependent protease HslVU, peptidase subunit [Paenibacillus sp.
HGF5]
Length = 180
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 97/178 (54%), Positives = 135/178 (75%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+ HATTI VR +G IAGDGQV+ G++V MK A+KVRRL +G ++AGFAGS ADA
Sbjct: 3 MTFHATTICAVRHNGTAAIAGDGQVTFGESVVMKQTAKKVRRLYRGQVVAGFAGSVADAI 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KLE++ L R++VELAKDWR D+ LR LEA++++ DKT L+I+G G+++E
Sbjct: 63 TLFEKFEGKLEEHHGNLQRAAVELAKDWRQDRVLRKLEALMIVMDKTGMLLISGGGEIIE 122
Query: 130 PENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ V+AIGSGG++ALSA RAL A++IAR+A+ IA+++CVYTN NI++E L
Sbjct: 123 PDDDVLAIGSGGNFALSAGRALKRHAGHMEAKDIAREALQIASEVCVYTNSNIIVEEL 180
>gi|86136741|ref|ZP_01055319.1| ATP-dependent protease peptidase subunit [Roseobacter sp. MED193]
gi|85826065|gb|EAQ46262.1| ATP-dependent protease peptidase subunit [Roseobacter sp. MED193]
Length = 204
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 119/191 (62%), Positives = 143/191 (74%), Gaps = 3/191 (1%)
Query: 2 VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIA 59
V M D + H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G ++I
Sbjct: 7 VKMADDQFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVIV 65
Query: 60 GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
GFAGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D T L
Sbjct: 66 GFAGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGTELL 125
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHN 179
VITG GDVLEPE+ V AIGSGG++AL+AAR +M + AE +AR AM+IAADICVYTN
Sbjct: 126 VITGAGDVLEPEHNVAAIGSGGNFALAAARGMMDSDRDAEAVARDAMAIAADICVYTNGR 185
Query: 180 IVLETLKVGDE 190
+ +E + +
Sbjct: 186 LTVERIAADGD 196
>gi|308068647|ref|YP_003870252.1| ATP-dependent protease hslV [Paenibacillus polymyxa E681]
gi|305857926|gb|ADM69714.1| ATP-dependent protease hslV [Paenibacillus polymyxa E681]
Length = 180
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 92/179 (51%), Positives = 133/179 (74%), Gaps = 3/179 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADA 68
+ HATTI VR +G IAGDGQV+ G +V MK A+KVRRL +G ++AGFAGS ADA
Sbjct: 2 DMSFHATTICAVRHNGKGAIAGDGQVTFGNSVVMKQTAKKVRRLYRGQVVAGFAGSVADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
TL E+ E KLE++ L R++VELAKDWR D+ LR LEA++++ D + L+I+G G+++
Sbjct: 62 ITLFEKFENKLEEHHGNLQRAAVELAKDWRQDRILRKLEALMIVMDSSGMLLISGGGEII 121
Query: 129 EPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EP++ V+AIGSGG++AL+AARA A+++AR+A+ +A++ICVYTN+ I++E L
Sbjct: 122 EPDDDVLAIGSGGNFALAAARAFKRHGSGMEAKDMAREALEVASEICVYTNNQIIVEEL 180
>gi|242242535|ref|ZP_04796980.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
epidermidis W23144]
gi|242233962|gb|EES36274.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
epidermidis W23144]
gi|319401457|gb|EFV89667.1| ATP-dependent protease hslV [Staphylococcus epidermidis FRI909]
Length = 180
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 101/176 (57%), Positives = 137/176 (77%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 5 LHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK L+++G G+V+ P+
Sbjct: 65 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILIVSGTGEVIAPD 124
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL +TQ SA E+A +++ +AADICV+TN NI++ETL
Sbjct: 125 DDLIAIGSGGNYALSAGRALKRHATQLSASEMAYESLKVAADICVFTNDNIIVETL 180
>gi|323441031|gb|EGA98738.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
O11]
gi|323443900|gb|EGB01511.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
O46]
Length = 181
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 102/176 (57%), Positives = 136/176 (77%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 6 LHATTIYAVRHNGKAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 66 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPD 125
Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL SAEE+A +++ +AADICV+TN+NIV+ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKRHASHLSAEEMAYESLKVAADICVFTNNNIVVETL 181
>gi|222151086|ref|YP_002560240.1| heat shock protein HslV [Macrococcus caseolyticus JCSC5402]
gi|254802417|sp|B9EBD3|HSLV_MACCJ RecName: Full=ATP-dependent protease subunit HslV
gi|222120209|dbj|BAH17544.1| heat shock protein HslV [Macrococcus caseolyticus JCSC5402]
Length = 180
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 96/177 (54%), Positives = 131/177 (74%), Gaps = 3/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
++HATTI +R +G ++GDGQV+LGQ V MK ARKVRRL ++AGFAGS ADAFT
Sbjct: 4 QLHATTIFAIRHNGRAAMSGDGQVTLGQQVIMKQTARKVRRLFNDEVVAGFAGSVADAFT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KL +Y L R++VELAK+WR DK LR LEAM+++ +K LV++G G+V++P
Sbjct: 64 LFEMFEAKLYEYNGNLSRAAVELAKEWRGDKMLRQLEAMLIVMNKDELLVVSGTGEVIQP 123
Query: 131 ENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
++ ++AIGSGG+YALSA RAL SA +IA+ ++ AADICV+TNHNI++E +
Sbjct: 124 DDDIIAIGSGGNYALSAGRALKRHASTLSARDIAQASLETAADICVFTNHNIIIEEI 180
>gi|320354503|ref|YP_004195842.1| ATP dependent peptidase CodWX, CodW component [Desulfobulbus
propionicus DSM 2032]
gi|320123005|gb|ADW18551.1| ATP dependent peptidase CodWX, CodW component [Desulfobulbus
propionicus DSM 2032]
Length = 179
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 101/176 (57%), Positives = 131/176 (74%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
K+ +TTIL VR G VV+AGDGQV+LG TV+K ARKVRRL +I GFAGS+ADAFT
Sbjct: 4 PKIRSTTILAVRHQGRVVVAGDGQVTLGTTVIKHQARKVRRLYHDQVITGFAGSTADAFT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L +RLE+KLEQY L+R++VELAKDWRMDK LR LEAM++ D +L+++G GDV+E
Sbjct: 64 LYDRLEQKLEQYNGNLMRAAVELAKDWRMDKMLRRLEAMLIAVDAKHSLLLSGTGDVIEA 123
Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG Y +A + + AE IAR A+ IA ICVYTN NIV+E++
Sbjct: 124 DDGILAIGSGGPYAQAAAKALVAHSSLDAEAIARTALEIAGSICVYTNTNIVVESI 179
>gi|310641538|ref|YP_003946296.1| ATP-dependent protease subunit hslv [Paenibacillus polymyxa SC2]
gi|309246488|gb|ADO56055.1| ATP-dependent protease subunit HslV [Paenibacillus polymyxa SC2]
Length = 180
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 92/179 (51%), Positives = 132/179 (73%), Gaps = 3/179 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADA 68
+ HATTI VR +G IAGDGQV+ G +V MK A+KVRRL +G ++AGFAGS ADA
Sbjct: 2 DMSFHATTICAVRHNGKGAIAGDGQVTFGNSVVMKQTAKKVRRLYRGQVVAGFAGSVADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
TL E+ E KLE++ L R++VELAKDWR D+ LR LEA++++ D + L+I+G G+++
Sbjct: 62 ITLFEKFENKLEEHHGNLQRAAVELAKDWRQDRVLRKLEALMIVMDSSGMLLISGGGEII 121
Query: 129 EPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EP++ V+AIGSGG++AL+AARA A+++AR+A+ +A++ICVYTN I++E L
Sbjct: 122 EPDDDVLAIGSGGNFALAAARAFKRHGSGMEAKDMAREALEVASEICVYTNSQIIVEEL 180
>gi|332297604|ref|YP_004439526.1| ATP-dependent protease hslV [Treponema brennaborense DSM 12168]
gi|332180707|gb|AEE16395.1| ATP-dependent protease hslV [Treponema brennaborense DSM 12168]
Length = 179
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 96/176 (54%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
K+ +TT++ VRK+G V +AGDGQV++G+TVMK NARKVRRL G ++ GFAG++ADAF
Sbjct: 4 PKIRSTTVIAVRKNGRVAMAGDGQVTMGETVMKGNARKVRRLYDGKVLTGFAGATADAFN 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ++ E K++++ L R++VELAK WR DK LR LEA++L+ADK L+I+G GDV+EP
Sbjct: 64 LFDKFEIKIKEFAGDLTRAAVELAKQWRTDKALRQLEALLLVADKDKILLISGTGDVIEP 123
Query: 131 ENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EN V+AIGSGG+YA +AA A + + A+EIA K++ IA +IC+YTN++I +E L
Sbjct: 124 ENDVLAIGSGGNYAYAAALAYLDSSDLGAKEIAEKSLKIAGNICIYTNNHITVEEL 179
>gi|290985682|ref|XP_002675554.1| predicted protein [Naegleria gruberi]
gi|284089151|gb|EFC42810.1| predicted protein [Naegleria gruberi]
Length = 414
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 110/183 (60%), Positives = 136/183 (74%), Gaps = 7/183 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MH TT+L VRK G V I DGQV+LG VMK NARK+R++G +IAGFAGS+ADA TL
Sbjct: 79 MHGTTVLCVRKAGKVCIQADGQVTLGHVVMKGNARKLRQIGSD-VIAGFAGSTADAITLF 137
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE+YP QL+R+ VE+AK WR DKYLR LEA++++ADK ITL++TG GDVLEP
Sbjct: 138 ERLEAKLEEYPGQLMRACVEMAKLWRTDKYLRKLEAVMIVADKNITLILTGNGDVLEPNE 197
Query: 133 G-----VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G V+ IGSGG YA+SAA+AL+ AE+IA+KAM IA +IC+YTN N TL+
Sbjct: 198 GGANDSVVGIGSGGHYAISAAKALLDVNGFDAEQIAQKAMLIAGEICIYTNTNFTRLTLE 257
Query: 187 VGD 189
D
Sbjct: 258 EKD 260
>gi|46579988|ref|YP_010796.1| ATP-dependent protease peptidase subunit [Desulfovibrio vulgaris
str. Hildenborough]
gi|120602600|ref|YP_967000.1| ATP-dependent protease peptidase subunit [Desulfovibrio vulgaris
DP4]
gi|85542201|sp|Q72BQ7|HSLV_DESVH RecName: Full=ATP-dependent protease subunit HslV
gi|166221637|sp|A1VDQ7|HSLV_DESVV RecName: Full=ATP-dependent protease subunit HslV
gi|46449404|gb|AAS96055.1| ATP-dependent protease hslV [Desulfovibrio vulgaris str.
Hildenborough]
gi|120562829|gb|ABM28573.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Desulfovibrio vulgaris DP4]
gi|311234014|gb|ADP86868.1| 20S proteasome A and B subunits [Desulfovibrio vulgaris RCH1]
Length = 181
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 98/180 (54%), Positives = 131/180 (72%), Gaps = 2/180 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTIL VR V IAGDGQV++GQ+ VMK +ARKVRRL G ++AGFAGS+ADAF
Sbjct: 1 MELKGTTILAVRGAQGVTIAGDGQVTMGQSIVMKHSARKVRRLYNGRVVAGFAGSTADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E E KLE++ L+R++VE+AK WR DKYLR LEAM+L+AD LV++G GDV+E
Sbjct: 61 TLFEHFEAKLEEHRGNLVRAAVEMAKSWRKDKYLRRLEAMLLVADNEHILVLSGNGDVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
P++G+ AIGSGG Y +A TQ AE IAR+AM IA +ICV+TN ++ +E+ +
Sbjct: 121 PDDGIAAIGSGGPYALAAARALARHTQLDAETIAREAMRIAGEICVFTNDHLTVESAETQ 180
>gi|94967245|ref|YP_589293.1| ATP-dependent protease peptidase subunit [Candidatus Koribacter
versatilis Ellin345]
gi|189043926|sp|Q1IV81|HSLV_ACIBL RecName: Full=ATP-dependent protease subunit HslV
gi|94549295|gb|ABF39219.1| ATP dependent peptidase CodWX, CodW component [Candidatus
Koribacter versatilis Ellin345]
Length = 180
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 101/173 (58%), Positives = 130/173 (75%), Gaps = 1/173 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
+TT+L VR+DG VV+A DGQV+LG+ V+K NARK+RRL + IIAGFAGS+ADAF+L
Sbjct: 8 RSTTVLCVRRDGKVVMAADGQVTLGEGVIKHNARKLRRLYQDKIIAGFAGSTADAFSLFG 67
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
R E KLEQY L R++VEL KDWR DK LR LEA++L+ADK T +I+G GDV+EP+ G
Sbjct: 68 RFESKLEQYHGNLSRAAVELGKDWRTDKMLRQLEALLLVADKDQTFLISGQGDVIEPDTG 127
Query: 134 VMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ AIGSGGSYA +AA AL+ + A +IA +AM IA IC+YTN + +E L
Sbjct: 128 IAAIGSGGSYATAAATALLEHSTLDARQIAEEAMKIAGKICIYTNDRVTIEEL 180
>gi|71733580|ref|YP_272685.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257482923|ref|ZP_05636964.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|289624153|ref|ZP_06457107.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289647386|ref|ZP_06478729.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298485094|ref|ZP_07003190.1| ATP-dependent protease hslV [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|123638631|sp|Q48PI4|HSLV_PSE14 RecName: Full=ATP-dependent protease subunit HslV
gi|71554133|gb|AAZ33344.1| heat shock protein HslV [Pseudomonas syringae pv. phaseolicola
1448A]
gi|298160346|gb|EFI01371.1| ATP-dependent protease hslV [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|330865706|gb|EGH00415.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330945992|gb|EGH47301.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330984742|gb|EGH82845.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331009575|gb|EGH89631.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 176
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 100/170 (58%), Positives = 131/170 (77%), Gaps = 1/170 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E
Sbjct: 122 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEE 171
>gi|258645672|ref|ZP_05733141.1| ATP-dependent protease HslVU, peptidase subunit [Dialister invisus
DSM 15470]
gi|260403039|gb|EEW96586.1| ATP-dependent protease HslVU, peptidase subunit [Dialister invisus
DSM 15470]
Length = 177
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 94/175 (53%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
ATTIL V+KDG +AGDGQV++G VMK ARKVRRL G +IAGFAGS ADAF L
Sbjct: 2 FTATTILAVKKDGHTAVAGDGQVTMGSAVVMKNTARKVRRLYHGKVIAGFAGSVADAFAL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E KL L+R++VE AK+WR D+ L+ LEA++++ D +++G G+V+EP+
Sbjct: 62 FDKFEGKLSDCNGNLVRAAVEFAKEWRRDRVLQKLEALLIMTDGDHLFLVSGSGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YAL+AARAL S + SA EIA +++ +AADICVYTNHN+++E +
Sbjct: 122 DGILAIGSGGNYALAAARALCSVSDLSAREIAEQSLHVAADICVYTNHNVIVEEI 176
>gi|218778263|ref|YP_002429581.1| ATP-dependent protease peptidase subunit [Desulfatibacillum
alkenivorans AK-01]
gi|218759647|gb|ACL02113.1| 20S proteasome A and B subunits [Desulfatibacillum alkenivorans
AK-01]
Length = 180
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 89/178 (50%), Positives = 120/178 (67%), Gaps = 1/178 (0%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ TTIL VRKDG IAGDGQV+LG TV+K A+KVR++ I+ GFAG++ADA
Sbjct: 3 NPLDFRGTTILAVRKDGKTAIAGDGQVTLGNTVVKHTAQKVRKIYHDKIVVGFAGATADA 62
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
L ++ E KLEQY L R++VELA+DWR DKYLR LEAM++ D +I+G GD++
Sbjct: 63 LNLFDKFEGKLEQYNGNLTRAAVELARDWRTDKYLRKLEAMMIAVDDQRMFLISGNGDII 122
Query: 129 EPENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EP+ GV+ IGSGG++A +AA L + A IA+ AM +AA IC+YTN + L +
Sbjct: 123 EPDEGVIGIGSGGAFAQAAATGLIRHSDLDASAIAKAAMDVAASICIYTNQVVTLHEI 180
>gi|304316914|ref|YP_003852059.1| 20S proteasome A and subunit betas [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778416|gb|ADL68975.1| 20S proteasome A and B subunits [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 176
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 98/175 (56%), Positives = 132/175 (75%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ VR+D V IAGDGQV+ G T++K A+K+RRL ++ GFAGS ADA TL
Sbjct: 2 FKGTTIVAVRRDNKVSIAGDGQVTFGENTILKHGAKKIRRLYNDEVLIGFAGSVADALTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E+KLEQY L R++VELA++WR DK L+ LEA+++ ADK +TLVI+G G+V+EP+
Sbjct: 62 SEMFEEKLEQYGGNLKRAAVELAQEWRKDKVLKKLEALLIAADKNVTLVISGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
N V+AIGSGG++A+SAA AL +T S EEIARK++ IA+ ICVYTN +I +E+L
Sbjct: 122 NDVIAIGSGGNFAMSAALALRYNTNLSVEEIARKSLEIASQICVYTNDHITVESL 176
>gi|23014724|ref|ZP_00054526.1| COG5405: ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 182
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 117/180 (65%), Positives = 147/180 (81%), Gaps = 1/180 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+ H TTIL +RK G VVIAGDGQVSLG TV+K NARKVR++G +I+ GFAG++A
Sbjct: 3 ESSLPSWHGTTILCLRKSGRVVIAGDGQVSLGATVIKGNARKVRKVGNDSILVGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTLLERLE KLE++P QL R+ VELAKDWR D+YLR LEAM+ +ADK ++LV+TG GD
Sbjct: 63 DAFTLLERLEAKLEKHPGQLTRACVELAKDWRTDRYLRRLEAMMAVADKDVSLVLTGQGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEPE+G++ IGSGG+YAL+AARAL+ + AE IARKAM+IAA ICVYTN N+++E+L
Sbjct: 123 VLEPEDGIIGIGSGGNYALAAARALIDIEGLDAETIARKAMAIAAGICVYTNGNMIVESL 182
>gi|317152585|ref|YP_004120633.1| 20S proteasome subunits A/B [Desulfovibrio aespoeensis Aspo-2]
gi|316942836|gb|ADU61887.1| 20S proteasome A and B subunits [Desulfovibrio aespoeensis Aspo-2]
Length = 182
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 107/178 (60%), Positives = 134/178 (75%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTI+ V+ D +AGDGQV+LGQ+V MK ARKVRR+ K +I GFAG++ADAF
Sbjct: 1 MEIRGTTIIAVKDDNGTAMAGDGQVTLGQSVAMKHTARKVRRIYKDKVIIGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER E KLE Y LLR++VELAKDWR DKYLR LEAM+L AD L+I+G GDV+E
Sbjct: 61 TLSERFEGKLETYSGNLLRAAVELAKDWRTDKYLRRLEAMLLAADGEHILIISGTGDVIE 120
Query: 130 PENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P++G+ AIGSGG YAL+A RAL +T +A IA KAM IAA+ICV+TN IVLET +
Sbjct: 121 PDDGLAAIGSGGPYALAAGRALRRNTDFTAAVIATKAMEIAAEICVFTNDKIVLETQE 178
>gi|242373544|ref|ZP_04819118.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
epidermidis M23864:W1]
gi|242348907|gb|EES40509.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
epidermidis M23864:W1]
Length = 180
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 136/176 (77%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 5 LHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ +K LV++G G+V+ P+
Sbjct: 65 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMNKDAILVVSGTGEVIAPD 124
Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL Q SA+E+A +++ +AADICV+TN NI++ETL
Sbjct: 125 DDLIAIGSGGNYALSAGRALKRHASQLSAKEMAYESLKVAADICVFTNDNIIVETL 180
>gi|147677584|ref|YP_001211799.1| ATP-dependent protease peptidase subunit [Pelotomaculum
thermopropionicum SI]
gi|189028455|sp|A5D2W7|HSLV_PELTS RecName: Full=ATP-dependent protease subunit HslV
gi|146273681|dbj|BAF59430.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Pelotomaculum thermopropionicum SI]
Length = 176
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 98/175 (56%), Positives = 132/175 (75%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ VRK G V +AGDGQV+ G T++K ARK+RRL K +++AGFAGS ADA TL
Sbjct: 2 FHATTIVAVRKGGKVAVAGDGQVTFGQNTIIKKGARKIRRLYKDSVLAGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+Y L R++VELAKDWR D+ LR LEA++++ADK L+I+G G+V+EP+
Sbjct: 62 FEKFEGKLEEYHGNLQRAAVELAKDWRTDRILRRLEALLIVADKENLLIISGSGEVIEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+GV AIGSGG Y +A + T AE+IAR+A+++AA+ICVYTN NI++E L
Sbjct: 122 DGVAAIGSGGPYALAAARALVRHTSMEAEDIAREALAVAAEICVYTNDNIIVERL 176
>gi|224476376|ref|YP_002633982.1| ATP-dependent protease peptidase subunit [Staphylococcus carnosus
subsp. carnosus TM300]
gi|254765619|sp|B9DPG5|HSLV_STACT RecName: Full=ATP-dependent protease subunit HslV
gi|222420983|emb|CAL27797.1| ATP-dependent protease HslV [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 179
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 95/175 (54%), Positives = 135/175 (77%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI +R++G +AGDGQV+LG+ V MK ARKVRRL G ++AGFAGS ADAFTL
Sbjct: 5 IHATTIFAIRQNGHAAMAGDGQVTLGEQVIMKQTARKVRRLYDGKVLAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+++ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 65 FEKFETKLQEFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKNSILVVSGTGEVISPD 124
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL T+ SA++IA ++ +A++ICV+TN NI++E L
Sbjct: 125 DDLIAIGSGGNYALSAGRALKRHTEMSAKDIAYASLKVASEICVFTNDNIIVEEL 179
>gi|326385661|ref|ZP_08207291.1| ATP-dependent protease peptidase subunit [Novosphingobium
nitrogenifigens DSM 19370]
gi|326209819|gb|EGD60606.1| ATP-dependent protease peptidase subunit [Novosphingobium
nitrogenifigens DSM 19370]
Length = 195
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 119/195 (61%), Positives = 147/195 (75%), Gaps = 10/195 (5%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG------K 54
M H ++ H TTI+ VRK+G VIAGDGQVS+G TVMK NARKVRRLG +
Sbjct: 1 MTDQAASHGLIQWHGTTIIGVRKNGRTVIAGDGQVSMGNTVMKPNARKVRRLGAPGEDGR 60
Query: 55 GNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD 114
G +IAGFAG++ADAFTL ERLE+KLE + QLLR++VELAKDWR DKYLRNLEA++++AD
Sbjct: 61 GKVIAGFAGATADAFTLFERLERKLEAHRGQLLRAAVELAKDWRTDKYLRNLEALMIVAD 120
Query: 115 KTITLVITGMGDVLEPENG----VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
LV+TG GDVLEPE + AIGSGG+YAL+AARAL ++ AE+IAR+AM +AA
Sbjct: 121 AETLLVLTGNGDVLEPEAAGDTVIAAIGSGGNYALAAARALADYESDAEQIARRAMKVAA 180
Query: 171 DICVYTNHNIVLETL 185
DICVYTN + LE +
Sbjct: 181 DICVYTNDRVTLEEI 195
>gi|49081626|gb|AAT50213.1| PA5053 [synthetic construct]
Length = 178
Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats.
Identities = 95/175 (54%), Positives = 133/175 (76%), Gaps = 2/175 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLHHGQVLAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E++LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EQQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLI 121
Query: 136 AIGSGGSY--ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
A+GSGG + A + A + + SA E+A A++IA ICV+TN N+ +E L
Sbjct: 122 AMGSGGGFAQAAALALLQHNAELSAREVAETALNIAGSICVFTNQNLTIEELDSA 176
>gi|218667651|ref|YP_002427121.1| heat shock protein HslV [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218519864|gb|ACK80450.1| heat shock protein HslV [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 173
Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats.
Identities = 103/174 (59%), Positives = 136/174 (78%), Gaps = 2/174 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MH TTIL VR+ VV+AGDGQV+ G TVMK NARKVRR+ G ++ GFAG++ADAFTLL
Sbjct: 1 MHGTTILCVRRGANVVMAGDGQVTFGNTVMKGNARKVRRIDPG-VLTGFAGATADAFTLL 59
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KL+ +P QL +++VELAK+WR D+ LR LEAM+ +AD +L+I+G GDVL+PE
Sbjct: 60 ERFEAKLKAHPGQLAKAAVELAKEWRTDRVLRRLEAMLAVADDKQSLIISGQGDVLDPEY 119
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG YAL+AARAL+ ++ A E+A++A+ IA DIC+YTNH +E L
Sbjct: 120 GIIAIGSGGPYALAAARALLENSDLPAREVAKRALGIAGDICIYTNHQHTIEEL 173
>gi|300692948|ref|YP_003753943.1| peptidase component of the HslUV protease [Ralstonia solanacearum
PSI07]
gi|299080008|emb|CBJ52683.1| peptidase component of the HslUV protease [Ralstonia solanacearum
PSI07]
Length = 178
Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats.
Identities = 98/176 (55%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVR + G ++ GFAG++ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIYDGKVLVGFAGATADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KL++Y LLR++V+LAKDWR D+ LR+LEAM+++AD+ TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAA+AL +T+ S E+ K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALAENTELSPREVVEKSLRIAGELCIYTNTNFVIETLE 178
>gi|30749448|pdb|1M4Y|A Chain A, Crystal Structure Of Hslv From Thermotoga Maritima
gi|30749449|pdb|1M4Y|B Chain B, Crystal Structure Of Hslv From Thermotoga Maritima
gi|30749450|pdb|1M4Y|C Chain C, Crystal Structure Of Hslv From Thermotoga Maritima
Length = 171
Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats.
Identities = 93/171 (54%), Positives = 126/171 (73%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL VR++G V+ GDGQV+ G TV+K NARKVR+LG+G ++AGFAGS ADA TL +R
Sbjct: 1 TTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMTLFDRF 60
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL ++ L +++VELAKDWR D+ LR LEA++L+ADK +I+G G+V++P++
Sbjct: 61 EAKLREWGGNLTKAAVELAKDWRTDRVLRRLEALLLVADKENIFIISGNGEVIQPDDDAA 120
Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG Y +A L +T SA EI KAM+IA +IC+YTN NIV+E +
Sbjct: 121 AIGSGGPYALAAAKALLRNTDLSAREIVEKAMTIAGEICIYTNQNIVIEEV 171
>gi|229170803|ref|YP_233503.2| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
syringae B728a]
gi|237798088|ref|ZP_04586549.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|302189055|ref|ZP_07265728.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
syringae 642]
gi|330961996|gb|EGH62256.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330971747|gb|EGH71813.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
aceris str. M302273PT]
gi|330977163|gb|EGH77121.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|331020940|gb|EGI00997.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 176
Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats.
Identities = 100/170 (58%), Positives = 131/170 (77%), Gaps = 1/170 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E
Sbjct: 122 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEE 171
>gi|42526719|ref|NP_971817.1| ATP-dependent protease peptidase subunit [Treponema denticola ATCC
35405]
gi|47605597|sp|P61478|HSLV_TREDE RecName: Full=ATP-dependent protease subunit HslV
gi|41817034|gb|AAS11728.1| heat shock protein HslVU, ATP-dependent protease HslV [Treponema
denticola ATCC 35405]
gi|325473781|gb|EGC76969.1| ATP-dependent protease hslV [Treponema denticola F0402]
Length = 178
Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats.
Identities = 100/177 (56%), Positives = 140/177 (79%), Gaps = 1/177 (0%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ K+ +TT++ VRKDG +V+AGDGQV++G+TVMK NARKVR++ G II GFAG++ADAF
Sbjct: 2 SQKIRSTTVIAVRKDGKIVMAGDGQVTMGETVMKGNARKVRKIYDGKIITGFAGATADAF 61
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TLLE+ E +++++ L R++VELAKDWR DK L+NL+A++L+AD TL+I+G GDV+E
Sbjct: 62 TLLEKFEIRVKEFSGDLTRAAVELAKDWRTDKMLKNLQALLLVADSKTTLLISGNGDVIE 121
Query: 130 PENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
PE V+AIGSGG+YA ++A ALM +T SA EIA K++ IA IC+YTN I+ E +
Sbjct: 122 PEEDVLAIGSGGNYAYASALALMQNTNLSAREIAEKSLQIAGKICIYTNGKIITEEI 178
>gi|299472682|emb|CBN78334.1| ATP-dependent protease peptidase subunit [Ectocarpus siliculosus]
Length = 212
Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats.
Identities = 106/189 (56%), Positives = 141/189 (74%), Gaps = 1/189 (0%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ ++MH TTIL VRK+G VV+ GDGQVS G V+K NA KVR+LG G ++AG+A
Sbjct: 20 MHSSASSGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYA 79
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
GS+ADA TL+ERLE KLE++ QL+ + V LAKDWR DKYLR LEA++L+AD +L +T
Sbjct: 80 GSTADALTLMERLEGKLEEHEGQLMNACVALAKDWRTDKYLRRLEAVVLVADSKFSLKVT 139
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIV 181
G+GDVL P GV+A+GSG YAL+AARAL SAEE+ARK+M IA+++CVYTN++
Sbjct: 140 GLGDVLAPNGGVIAVGSGQPYALAAARALSGQEDLSAEEVARKSMEIASELCVYTNNHFT 199
Query: 182 LETLKVGDE 190
+ +L V +E
Sbjct: 200 MHSLDVEEE 208
>gi|295696107|ref|YP_003589345.1| 20S proteasome A and B subunits [Bacillus tusciae DSM 2912]
gi|295411709|gb|ADG06201.1| 20S proteasome A and B subunits [Bacillus tusciae DSM 2912]
Length = 180
Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats.
Identities = 90/179 (50%), Positives = 127/179 (70%), Gaps = 3/179 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
++H TTI + G V+AGDGQV++G TVMK A+KVRRL +G ++AGFAGS ADA
Sbjct: 2 TQLHGTTIFAILDRGHAVMAGDGQVTMGNATVMKHGAKKVRRLYQGRVLAGFAGSVADAL 61
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L ER E LE + L R++V++AK+WR D+ LR LEAM+++ D+ L+++G G+V+E
Sbjct: 62 ALFERFEASLESHSGNLPRAAVDVAKEWRTDRVLRRLEAMLVVCDREHLLLLSGSGEVIE 121
Query: 130 PENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P++G++A+GSGG YAL+A RAL S EIA +AM IA++ICVYTN V+E L+
Sbjct: 122 PDDGILAVGSGGVYALAAGRALKRHAAGLSPREIALEAMRIASEICVYTNDRFVVEELE 180
>gi|257419374|ref|ZP_05596368.1| 20S proteasome peptidase subunit [Enterococcus faecalis T11]
gi|257161202|gb|EEU91162.1| 20S proteasome peptidase subunit [Enterococcus faecalis T11]
Length = 182
Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats.
Identities = 91/178 (51%), Positives = 136/178 (76%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ ++ GFAGS ADAFT
Sbjct: 5 QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ +K L+++G G+V+ P
Sbjct: 65 LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 124
Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG++ALSAARA+ + + SA+EIA+ A++IAADICV+TNHNI++E L
Sbjct: 125 DDGILAIGSGGNFALSAARAMKNFGDKEMSAKEIAKNALNIAADICVFTNHNIIVEEL 182
>gi|159469063|ref|XP_001692687.1| peptidase subunit of mitochondrial ATP-dependent protease hslUV
[Chlamydomonas reinhardtii]
gi|158277940|gb|EDP03706.1| peptidase subunit of mitochondrial ATP-dependent protease hslUV
[Chlamydomonas reinhardtii]
Length = 248
Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats.
Identities = 106/184 (57%), Positives = 140/184 (76%), Gaps = 2/184 (1%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
+ + H+TTIL VRKD +VV+ GDGQVS+G +K N RKVRR+G+G ++AGFAGS
Sbjct: 44 SSTYTRPETHSTTILCVRKDDMVVMIGDGQVSVGSVSVKPNVRKVRRIGEG-VVAGFAGS 102
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
+AD +LLERLE KLE++P QLLR++VELAK WR DK LR L+A +L+AD + TL I+G
Sbjct: 103 AADGLSLLERLEMKLEEHPGQLLRAAVELAKQWRQDKALRFLQAELLVADASTTLTISGN 162
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEP +GVMAIGSGG++AL+AARALM + A I K+M IAAD+C+YTN N +E
Sbjct: 163 GDVLEPHDGVMAIGSGGNFALAAARALMDVPEMDAMTIGTKSMKIAADMCIYTNDNFTIE 222
Query: 184 TLKV 187
++ +
Sbjct: 223 SINL 226
>gi|32491027|ref|NP_871281.1| ATP-dependent protease peptidase subunit [Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis]
gi|31340163|sp|Q8D2S6|HSLV_WIGBR RecName: Full=ATP-dependent protease subunit HslV
gi|25166233|dbj|BAC24424.1| hslV [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 180
Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats.
Identities = 94/171 (54%), Positives = 128/171 (74%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G +VI GDGQ +LG T+MK N +KVR L +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHIVIGGDGQATLGNTIMKNNVKKVRTLYNDTVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKL+ + + ++S+VELAKDWR D+ LR LEA++ +ADK +L+ITG DV++PE+ V+
Sbjct: 62 EKKLQIHQGRFVKSAVELAKDWRTDRMLRRLEALLAVADKNTSLIITGNADVIQPESDVI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG YA SAARAL+ +T A +I RK++ I+ DIC+Y+NH E L
Sbjct: 122 AIGSGGPYAQSAARALLENTDLCARDIVRKSLQISGDICLYSNHFFSFEEL 172
>gi|70726662|ref|YP_253576.1| ATP-dependent protease peptidase subunit [Staphylococcus
haemolyticus JCSC1435]
gi|123660048|sp|Q4L5V5|HSLV_STAHJ RecName: Full=ATP-dependent protease subunit HslV
gi|68447386|dbj|BAE04970.1| heat shock protein HslV [Staphylococcus haemolyticus JCSC1435]
Length = 181
Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats.
Identities = 99/180 (55%), Positives = 136/180 (75%), Gaps = 3/180 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSAD 67
+HATTI VR +G +AGDGQV+LG+ V MK ARKVRRL +G ++AGFAGS AD
Sbjct: 2 SKTSLHATTIYAVRHNGEAAMAGDGQVTLGEQVIMKQTARKVRRLYEGKVLAGFAGSVAD 61
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V
Sbjct: 62 AFTLFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEV 121
Query: 128 LEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ P++ ++AIGSGG+YALSA RAL Q SA+E+A +++ +A+DICV+TN NI++ETL
Sbjct: 122 IAPDDDLIAIGSGGNYALSAGRALKRHASQLSAKEMAYESLKVASDICVFTNDNIIVETL 181
>gi|317129215|ref|YP_004095497.1| 20S proteasome A and subunit betas [Bacillus cellulosilyticus DSM
2522]
gi|315474163|gb|ADU30766.1| 20S proteasome A and B subunits [Bacillus cellulosilyticus DSM
2522]
Length = 180
Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats.
Identities = 90/177 (50%), Positives = 128/177 (72%), Gaps = 3/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
++ TTI V+ G +AGDGQV+ G VMK A+KVR++ +G ++AGFAGS ADAFT
Sbjct: 3 QIRGTTIFAVKHQGKCAMAGDGQVTFGNAVVMKHTAKKVRKIYRGKVVAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E+KLE++ L R++VE+AKDWR D+ LR LEAM+++ D++ +I G G+V+EP
Sbjct: 63 LFEKFEQKLEEFSGNLQRAAVEMAKDWRSDRVLRKLEAMLIVMDESNLYLIAGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG YAL+A R+L +A+EIA A+ AADICVYTN I++E L
Sbjct: 123 DDGILAIGSGGHYALAAGRSLKEYAQHLTAKEIAYAALKTAADICVYTNSEIIVEEL 179
>gi|20807895|ref|NP_623066.1| ATP-dependent protease peptidase subunit [Thermoanaerobacter
tengcongensis MB4]
gi|24211781|sp|Q8R9Y2|HSLV_THETN RecName: Full=ATP-dependent protease subunit HslV
gi|20516461|gb|AAM24670.1| Proteasome protease subunit [Thermoanaerobacter tengcongensis MB4]
Length = 176
Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats.
Identities = 97/175 (55%), Positives = 130/175 (74%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ VR+ V +AGDGQV+ G T++K A+K+RRL G +I GFAGS ADA TL
Sbjct: 2 FRGTTIVAVRRGDRVSVAGDGQVTFGDSTILKHGAKKIRRLYNGEVIVGFAGSVADAMTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E+KLEQY L R++VELA++WR DK LR LEA+++ ADK TL+I+G G+V+EP+
Sbjct: 62 SQKFEEKLEQYGGNLKRAAVELAQEWRKDKILRKLEALLIAADKKDTLLISGTGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ IGSGG+YA++AA AL +T EEIARKA+ IA+ ICVYTN+NI +ETL
Sbjct: 122 EDVIGIGSGGNYAMAAALALRYNTDLDTEEIARKALEIASKICVYTNNNITVETL 176
>gi|29376201|ref|NP_815355.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
V583]
gi|255972715|ref|ZP_05423301.1| 20S proteasome [Enterococcus faecalis T1]
gi|255975767|ref|ZP_05426353.1| 20S proteasome [Enterococcus faecalis T2]
gi|256619142|ref|ZP_05475988.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
ATCC 4200]
gi|256762578|ref|ZP_05503158.1| 20S proteasome [Enterococcus faecalis T3]
gi|256853204|ref|ZP_05558574.1| heat shock protein HslV [Enterococcus faecalis T8]
gi|256959058|ref|ZP_05563229.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
DS5]
gi|256961849|ref|ZP_05566020.1| hypothetical protein EFGG_00927 [Enterococcus faecalis Merz96]
gi|256965046|ref|ZP_05569217.1| hypothetical protein EFHG_00342 [Enterococcus faecalis HIP11704]
gi|257079089|ref|ZP_05573450.1| hypothetical protein EFIG_00354 [Enterococcus faecalis JH1]
gi|257082472|ref|ZP_05576833.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
E1Sol]
gi|257085104|ref|ZP_05579465.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
Fly1]
gi|257086665|ref|ZP_05581026.1| hypothetical protein EFLG_00256 [Enterococcus faecalis D6]
gi|257089963|ref|ZP_05584324.1| 20S proteasome peptidase subunit [Enterococcus faecalis CH188]
gi|257416172|ref|ZP_05593166.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
AR01/DG]
gi|257422532|ref|ZP_05599522.1| heat shock protein hslV [Enterococcus faecalis X98]
gi|294781640|ref|ZP_06746976.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis PC1.1]
gi|300860692|ref|ZP_07106779.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TUSoD Ef11]
gi|47605678|sp|Q834K3|HSLV_ENTFA RecName: Full=ATP-dependent protease subunit HslV
gi|29343664|gb|AAO81425.1| heat shock protein HslV [Enterococcus faecalis V583]
gi|255963733|gb|EET96209.1| 20S proteasome [Enterococcus faecalis T1]
gi|255968639|gb|EET99261.1| 20S proteasome [Enterococcus faecalis T2]
gi|256598669|gb|EEU17845.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
ATCC 4200]
gi|256683829|gb|EEU23524.1| 20S proteasome [Enterococcus faecalis T3]
gi|256711663|gb|EEU26701.1| heat shock protein HslV [Enterococcus faecalis T8]
gi|256949554|gb|EEU66186.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
DS5]
gi|256952345|gb|EEU68977.1| hypothetical protein EFGG_00927 [Enterococcus faecalis Merz96]
gi|256955542|gb|EEU72174.1| hypothetical protein EFHG_00342 [Enterococcus faecalis HIP11704]
gi|256987119|gb|EEU74421.1| hypothetical protein EFIG_00354 [Enterococcus faecalis JH1]
gi|256990502|gb|EEU77804.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
E1Sol]
gi|256993134|gb|EEU80436.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
Fly1]
gi|256994695|gb|EEU81997.1| hypothetical protein EFLG_00256 [Enterococcus faecalis D6]
gi|256998775|gb|EEU85295.1| 20S proteasome peptidase subunit [Enterococcus faecalis CH188]
gi|257158000|gb|EEU87960.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
ARO1/DG]
gi|257164356|gb|EEU94316.1| heat shock protein hslV [Enterococcus faecalis X98]
gi|294451336|gb|EFG19802.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis PC1.1]
gi|295113044|emb|CBL31681.1| ATP dependent peptidase CodWX, CodW component. Threonine peptidase.
MEROPS family T01B [Enterococcus sp. 7L76]
gi|300849731|gb|EFK77481.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TUSoD Ef11]
gi|323480808|gb|ADX80247.1| ATP-dependent protease HslV [Enterococcus faecalis 62]
Length = 182
Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats.
Identities = 90/178 (50%), Positives = 135/178 (75%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ ++ GFAGS ADAFT
Sbjct: 5 QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ +K L+++G G+V+ P
Sbjct: 65 LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 124
Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG++ALSAARA+ + + A+EIA+ A++IAADICV+TNHNI++E L
Sbjct: 125 DDGILAIGSGGNFALSAARAMKNFGDKEMPAKEIAKNALNIAADICVFTNHNIIVEEL 182
>gi|73539873|ref|YP_294393.1| ATP-dependent protease peptidase subunit [Ralstonia eutropha
JMP134]
gi|123626065|sp|Q476Y4|HSLV_RALEJ RecName: Full=ATP-dependent protease subunit HslV
gi|72117286|gb|AAZ59549.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Ralstonia eutropha JMP134]
Length = 178
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 99/176 (56%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ G ++ GFAGS+ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRRIYNGKVLVGFAGSTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE+Y L R++V+LAKDWR D+ LR LEAM++ AD+ TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKYQGNLTRAAVDLAKDWRSDRALRRLEAMLITADRETTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAA+AL+ +T+ + ++ KA++IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALVENTELAPRDVVEKALTIAGELCIYTNTNFVIETLE 178
>gi|227551196|ref|ZP_03981245.1| T01 family HslV component of HslUV peptidase [Enterococcus faecium
TX1330]
gi|257887687|ref|ZP_05667340.1| 20S proteasome protein [Enterococcus faecium 1,141,733]
gi|257896181|ref|ZP_05675834.1| 20S proteasome protein [Enterococcus faecium Com12]
gi|257898818|ref|ZP_05678471.1| 20S proteasome protein [Enterococcus faecium Com15]
gi|293377181|ref|ZP_06623389.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium PC4.1]
gi|293570279|ref|ZP_06681348.1| ATP-dependent protease HslV [Enterococcus faecium E980]
gi|227179664|gb|EEI60636.1| T01 family HslV component of HslUV peptidase [Enterococcus faecium
TX1330]
gi|257823741|gb|EEV50673.1| 20S proteasome protein [Enterococcus faecium 1,141,733]
gi|257832746|gb|EEV59167.1| 20S proteasome protein [Enterococcus faecium Com12]
gi|257836730|gb|EEV61804.1| 20S proteasome protein [Enterococcus faecium Com15]
gi|291609686|gb|EFF38947.1| ATP-dependent protease HslV [Enterococcus faecium E980]
gi|292644201|gb|EFF62303.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium PC4.1]
Length = 182
Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats.
Identities = 89/178 (50%), Positives = 134/178 (75%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ G ++ GFAGS ADAFT
Sbjct: 5 PFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNGEVVVGFAGSVADAFT 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ ++ L+++G G+V+ P
Sbjct: 65 LEEKFEGKLNEYNGNLQRAAVELAQEWRTQQSMQKLEAMLIVMNEKEMLLVSGTGEVITP 124
Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG++AL+AARA+ + SA+EIA A++IAADIC++TNHNI++E L
Sbjct: 125 DDGILAIGSGGNFALAAARAMKNYAQNDMSAKEIAENALNIAADICIFTNHNIIVEEL 182
>gi|94987174|ref|YP_595107.1| ATP-dependent protease peptidase subunit [Lawsonia intracellularis
PHE/MN1-00]
gi|166222983|sp|Q1MQE1|HSLV_LAWIP RecName: Full=ATP-dependent protease subunit HslV
gi|94731423|emb|CAJ54786.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Lawsonia
intracellularis PHE/MN1-00]
Length = 177
Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats.
Identities = 99/177 (55%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTIL VR G V +AGDGQV+LGQ+V MK A+KVRR+ K +IAGFAG++ADAF
Sbjct: 1 MEIRGTTILAVRHKGHVALAGDGQVTLGQSVVMKHTAKKVRRMYKNQVIAGFAGTTADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER + LE+ L+R++VELAK+WR DKYLR LEAM+L+ DK T V++G GDV+E
Sbjct: 61 TLFERFDNYLEETNGNLVRAAVELAKEWRKDKYLRRLEAMLLVVDKDHTFVLSGTGDVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G+ AIGSGG Y +A + ++ SA EIAR++M I A+ICV+TN N+ LETL
Sbjct: 121 PDDGIAAIGSGGLYAVAAARALVAHSELSAAEIARESMRITAEICVFTNLNLTLETL 177
>gi|320322073|gb|EFW78169.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330826|gb|EFW86800.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330872046|gb|EGH06195.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 176
Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats.
Identities = 100/170 (58%), Positives = 130/170 (76%), Gaps = 1/170 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R+ VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EAQLEKHQGHLVRAVVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E
Sbjct: 122 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEE 171
>gi|69246762|ref|ZP_00604110.1| 20S proteasome, A and B subunits [Enterococcus faecium DO]
gi|257878025|ref|ZP_05657678.1| 20S proteasome protein [Enterococcus faecium 1,230,933]
gi|257881189|ref|ZP_05660842.1| 20S proteasome protein [Enterococcus faecium 1,231,502]
gi|257884852|ref|ZP_05664505.1| 20S proteasome protein [Enterococcus faecium 1,231,501]
gi|257889776|ref|ZP_05669429.1| 20S proteasome protein [Enterococcus faecium 1,231,410]
gi|257892287|ref|ZP_05671940.1| 20S proteasome protein [Enterococcus faecium 1,231,408]
gi|258616484|ref|ZP_05714254.1| ATP-dependent protease peptidase subunit [Enterococcus faecium DO]
gi|260559075|ref|ZP_05831261.1| 20S proteasome protein [Enterococcus faecium C68]
gi|261207609|ref|ZP_05922294.1| 20S proteasome protein [Enterococcus faecium TC 6]
gi|289565121|ref|ZP_06445574.1| ATP-dependent protease hslV [Enterococcus faecium D344SRF]
gi|293556769|ref|ZP_06675332.1| ATP-dependent protease HslV [Enterococcus faecium E1039]
gi|293563427|ref|ZP_06677876.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1162]
gi|293568160|ref|ZP_06679496.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1071]
gi|294614816|ref|ZP_06694711.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1636]
gi|294617495|ref|ZP_06697126.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1679]
gi|294622308|ref|ZP_06701351.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium U0317]
gi|314938037|ref|ZP_07845347.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133a04]
gi|314941977|ref|ZP_07848838.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133C]
gi|314948770|ref|ZP_07852142.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0082]
gi|314951788|ref|ZP_07854827.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133A]
gi|314991805|ref|ZP_07857263.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133B]
gi|314995846|ref|ZP_07860933.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133a01]
gi|68195116|gb|EAN09576.1| 20S proteasome, A and B subunits [Enterococcus faecium DO]
gi|257812253|gb|EEV41011.1| 20S proteasome protein [Enterococcus faecium 1,230,933]
gi|257816847|gb|EEV44175.1| 20S proteasome protein [Enterococcus faecium 1,231,502]
gi|257820690|gb|EEV47838.1| 20S proteasome protein [Enterococcus faecium 1,231,501]
gi|257826136|gb|EEV52762.1| 20S proteasome protein [Enterococcus faecium 1,231,410]
gi|257828666|gb|EEV55273.1| 20S proteasome protein [Enterococcus faecium 1,231,408]
gi|260074832|gb|EEW63148.1| 20S proteasome protein [Enterococcus faecium C68]
gi|260077992|gb|EEW65698.1| 20S proteasome protein [Enterococcus faecium TC 6]
gi|289163128|gb|EFD10975.1| ATP-dependent protease hslV [Enterococcus faecium D344SRF]
gi|291589150|gb|EFF20962.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1071]
gi|291592278|gb|EFF23892.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1636]
gi|291596235|gb|EFF27497.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1679]
gi|291598200|gb|EFF29298.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium U0317]
gi|291601101|gb|EFF31390.1| ATP-dependent protease HslV [Enterococcus faecium E1039]
gi|291604688|gb|EFF34173.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Enterococcus faecium E1162]
gi|313589950|gb|EFR68795.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133a01]
gi|313593616|gb|EFR72461.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133B]
gi|313596067|gb|EFR74912.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133A]
gi|313599229|gb|EFR78074.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133C]
gi|313642612|gb|EFS07192.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0133a04]
gi|313644836|gb|EFS09416.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecium TX0082]
Length = 182
Score = 273 bits (700), Expect = 7e-72, Method: Composition-based stats.
Identities = 89/178 (50%), Positives = 133/178 (74%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ G ++ GFAGS ADAFT
Sbjct: 5 PFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNGEVVVGFAGSVADAFT 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ + L+++G G+V+ P
Sbjct: 65 LEEKFEGKLNEYNGNLQRAAVELAQEWRTQQSMQKLEAMLIVMNDKEMLLVSGTGEVITP 124
Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG++AL+AARA+ + SA+EIA A++IAADIC++TNHNI++E L
Sbjct: 125 DDGILAIGSGGNFALAAARAMKNYAQNDMSAKEIAENALNIAADICIFTNHNIIVEEL 182
>gi|315658458|ref|ZP_07911330.1| ATP-dependent protease HslVU [Staphylococcus lugdunensis M23590]
gi|315496787|gb|EFU85110.1| ATP-dependent protease HslVU [Staphylococcus lugdunensis M23590]
Length = 180
Score = 273 bits (700), Expect = 7e-72, Method: Composition-based stats.
Identities = 98/179 (54%), Positives = 135/179 (75%), Gaps = 3/179 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADA 68
+ +HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL ++AGFAGS ADA
Sbjct: 2 STSIHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYDDKVLAGFAGSVADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK+ LV++G G+V+
Sbjct: 62 FTLFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKSGILVVSGTGEVI 121
Query: 129 EPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ ++AIGSGG+YALSA RAL SA+E+A +++ +A+DICV+TN NI++ETL
Sbjct: 122 APDDDIIAIGSGGNYALSAGRALKRHAAHLSAKEMAYESLKVASDICVFTNDNIIVETL 180
>gi|315172225|gb|EFU16242.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX1346]
Length = 194
Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats.
Identities = 90/178 (50%), Positives = 135/178 (75%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ ++ GFAGS ADAFT
Sbjct: 17 QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 76
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ +K L+++G G+V+ P
Sbjct: 77 LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 136
Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG++ALSAARA+ + + A+EIA+ A++IAADICV+TNHNI++E L
Sbjct: 137 DDGILAIGSGGNFALSAARAMKNFGDKEMPAKEIAKNALNIAADICVFTNHNIIVEEL 194
>gi|314933432|ref|ZP_07840797.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
caprae C87]
gi|313653582|gb|EFS17339.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
caprae C87]
Length = 180
Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats.
Identities = 99/176 (56%), Positives = 136/176 (77%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 5 LHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ +K LV++G G+V+ P+
Sbjct: 65 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMNKDAILVVSGTGEVIAPD 124
Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL Q SA+++A +++ +AADICV+TN NI++ETL
Sbjct: 125 DDLIAIGSGGNYALSAGRALKRHASQLSAKDMAYESLKVAADICVFTNDNIIVETL 180
>gi|188996765|ref|YP_001931016.1| 20S proteasome A and B subunits [Sulfurihydrogenibium sp. YO3AOP1]
gi|229486365|sp|B2V939|HSLV_SULSY RecName: Full=ATP-dependent protease subunit HslV
gi|188931832|gb|ACD66462.1| 20S proteasome A and B subunits [Sulfurihydrogenibium sp. YO3AOP1]
Length = 178
Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats.
Identities = 98/176 (55%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TTIL VR++G VIAGDGQV+LG V+K A+K+R L +G +I GFAGS+AD L
Sbjct: 3 KIKSTTILAVRRNGKTVIAGDGQVTLGSAVVKHTAKKIRVLNEGKVIVGFAGSAADGLAL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ERLE+KL +Y L++S+VELAKDWR+DKYLR LEA+++ ADK L+++G GDV+EP+
Sbjct: 63 MERLEEKLNKYKGNLVKSAVELAKDWRLDKYLRRLEAVMIAADKNNMLLLSGNGDVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
V+AIGSGG YA SAA AL +T A +I +AM IA +IC+YTN N V+E ++
Sbjct: 123 EPVLAIGSGGDYARSAALALYRNTDLDARKIVEEAMKIAGEICIYTNQNFVIEEIE 178
>gi|223044218|ref|ZP_03614255.1| ATP-dependent protease HslV [Staphylococcus capitis SK14]
gi|222442368|gb|EEE48476.1| ATP-dependent protease HslV [Staphylococcus capitis SK14]
Length = 180
Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 136/176 (77%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 5 LHATTIYAVRHNGDAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ +K LV++G G+V+ P+
Sbjct: 65 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMNKDAILVVSGTGEVIAPD 124
Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL Q SA+E+A +++ +AADICV+TN NI++ETL
Sbjct: 125 DDLIAIGSGGNYALSAGRALKRHASQLSAKEMAYESLKVAADICVFTNDNIIVETL 180
>gi|227518832|ref|ZP_03948881.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
TX0104]
gi|227553449|ref|ZP_03983498.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
HH22]
gi|229545743|ref|ZP_04434468.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
TX1322]
gi|229549932|ref|ZP_04438657.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
ATCC 29200]
gi|293382914|ref|ZP_06628832.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis R712]
gi|293389597|ref|ZP_06634054.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis S613]
gi|307270939|ref|ZP_07552222.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX4248]
gi|307273144|ref|ZP_07554390.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0855]
gi|307274879|ref|ZP_07556042.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX2134]
gi|307277986|ref|ZP_07559070.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0860]
gi|307289186|ref|ZP_07569142.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0109]
gi|307291917|ref|ZP_07571786.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0411]
gi|312899494|ref|ZP_07758824.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0470]
gi|312903387|ref|ZP_07762567.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0635]
gi|312907616|ref|ZP_07766607.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis DAPTO 512]
gi|312910233|ref|ZP_07769080.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis DAPTO 516]
gi|312951577|ref|ZP_07770473.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0102]
gi|227073745|gb|EEI11708.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
TX0104]
gi|227177425|gb|EEI58397.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
HH22]
gi|229304945|gb|EEN70941.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
ATCC 29200]
gi|229309193|gb|EEN75180.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
TX1322]
gi|291079579|gb|EFE16943.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis R712]
gi|291081214|gb|EFE18177.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis S613]
gi|306496915|gb|EFM66463.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0411]
gi|306499895|gb|EFM69256.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0109]
gi|306505383|gb|EFM74569.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0860]
gi|306508327|gb|EFM77434.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX2134]
gi|306510129|gb|EFM79153.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0855]
gi|306512437|gb|EFM81086.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX4248]
gi|310626644|gb|EFQ09927.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis DAPTO 512]
gi|310630543|gb|EFQ13826.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0102]
gi|310633263|gb|EFQ16546.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0635]
gi|311289506|gb|EFQ68062.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis DAPTO 516]
gi|311293364|gb|EFQ71920.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0470]
gi|315029304|gb|EFT41236.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX4000]
gi|315034050|gb|EFT45982.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0017]
gi|315037058|gb|EFT48990.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0027]
gi|315145126|gb|EFT89142.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX2141]
gi|315147343|gb|EFT91359.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX4244]
gi|315150457|gb|EFT94473.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0012]
gi|315152401|gb|EFT96417.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0031]
gi|315155673|gb|EFT99689.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0043]
gi|315160540|gb|EFU04557.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0645]
gi|315164095|gb|EFU08112.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX1302]
gi|315168955|gb|EFU12972.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX1341]
gi|315169811|gb|EFU13828.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX1342]
gi|315575785|gb|EFU87976.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0309B]
gi|315577627|gb|EFU89818.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0630]
gi|315580437|gb|EFU92628.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0309A]
gi|327535212|gb|AEA94046.1| ATP-dependent protease HslVU [Enterococcus faecalis OG1RF]
gi|329571617|gb|EGG53298.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX1467]
Length = 194
Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats.
Identities = 90/178 (50%), Positives = 135/178 (75%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ ++ GFAGS ADAFT
Sbjct: 17 QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 76
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ +K L+++G G+V+ P
Sbjct: 77 LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 136
Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG++ALSAARA+ + + A+EIA+ A++IAADICV+TNHNI++E L
Sbjct: 137 DDGILAIGSGGNFALSAARAMKNFGDKEMPAKEIAKNALNIAADICVFTNHNIIVEEL 194
>gi|332686605|ref|YP_004456379.1| ATP-dependent protease HslV [Melissococcus plutonius ATCC 35311]
gi|332370614|dbj|BAK21570.1| ATP-dependent protease HslV [Melissococcus plutonius ATCC 35311]
Length = 182
Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats.
Identities = 90/178 (50%), Positives = 138/178 (77%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI + KDG +AGDGQV++GQ+V MK +A+KVRR+ ++ GFAGS ADAFT
Sbjct: 5 QFHSTTICAIEKDGKFAMAGDGQVTMGQSVVMKGSAKKVRRIYNNEVVVGFAGSVADAFT 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ +K L+++G G+V++P
Sbjct: 65 LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVIQP 124
Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG++AL+AARA+ + + SA+EIA+ A+SIAADICV+TNHNI++E +
Sbjct: 125 DDGILAIGSGGNFALAAARAMKNYGDKEISAKEIAKNALSIAADICVFTNHNIIVEEI 182
>gi|239636269|ref|ZP_04677271.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
warneri L37603]
gi|239597624|gb|EEQ80119.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
warneri L37603]
gi|330685681|gb|EGG97322.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
epidermidis VCU121]
Length = 181
Score = 273 bits (699), Expect = 9e-72, Method: Composition-based stats.
Identities = 101/176 (57%), Positives = 135/176 (76%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL G ++AGFAGS ADAFTL
Sbjct: 6 LHATTIYAVRHNGGAAMAGDGQVTLGQQVIMKQTARKVRRLYDGKVLAGFAGSVADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 66 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPD 125
Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL Q SAEE+A +++ +A+DICV+TN NI++ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKRHAGQMSAEEMAYESLKVASDICVFTNDNIIVETL 181
>gi|283957996|ref|ZP_06375447.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus A017934/97]
gi|283790145|gb|EFC28962.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
aureus subsp. aureus A017934/97]
Length = 181
Score = 273 bits (699), Expect = 9e-72, Method: Composition-based stats.
Identities = 101/176 (57%), Positives = 134/176 (76%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR + +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 6 LHATTIYAVRHNRKAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V+ P+
Sbjct: 66 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPD 125
Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL SAEE+A +++ +AADICV+TN NIV+ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKRHASHLSAEEMAYESLKVAADICVFTNDNIVVETL 181
>gi|229577466|ref|YP_001170893.2| ATP-dependent protease peptidase subunit [Pseudomonas stutzeri
A1501]
gi|327479008|gb|AEA82318.1| ATP-dependent protease peptidase subunit [Pseudomonas stutzeri DSM
4166]
Length = 178
Score = 273 bits (699), Expect = 9e-72, Method: Composition-based stats.
Identities = 94/176 (53%), Positives = 129/176 (73%), Gaps = 3/176 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV++PE+ ++
Sbjct: 62 EGQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVQPEDDLI 121
Query: 136 AIGSGGSY---ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
A+GSGG + A A SA+EIA A++IA ICV+TN N+ +E L
Sbjct: 122 AMGSGGGFAQAAAKALLLKAGADMSAQEIAETALNIAGSICVFTNQNLTIEELDSA 177
>gi|300870912|ref|YP_003785783.1| ATP-dependent protease peptidase subunit [Brachyspira pilosicoli
95/1000]
gi|300688611|gb|ADK31282.1| ATP-dependent protease peptidase subunit [Brachyspira pilosicoli
95/1000]
Length = 176
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 100/175 (57%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI V +DGV IAGDGQV+LG+TVMK NA K+R+L G +I+GFAGS+ADAFTL
Sbjct: 2 FKGTTICAVCRDGVTAIAGDGQVTLGETVMKPNAVKLRKLYGGKVISGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ EKKL+++ L R++VELA++WR DK LRNL+A+I++A K L+++G GDV+E EN
Sbjct: 62 EKFEKKLQEFSGDLTRAAVELAREWRTDKMLRNLQALIIVASKEKMLLLSGNGDVIESEN 121
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
++AIGSGG YA +AA AL +T SA+EIARK++ IA+ IC+YTN NI LE ++
Sbjct: 122 NILAIGSGGQYAKAAAMALSENTNLSAKEIARKSLEIASQICIYTNSNISLEVIE 176
>gi|289550956|ref|YP_003471860.1| ATP-dependent protease HslV [Staphylococcus lugdunensis HKU09-01]
gi|289180488|gb|ADC87733.1| ATP-dependent protease HslV [Staphylococcus lugdunensis HKU09-01]
Length = 180
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 98/179 (54%), Positives = 135/179 (75%), Gaps = 3/179 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADA 68
+ +HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL ++AGFAGS ADA
Sbjct: 2 STSIHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYDDKVLAGFAGSVADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK+ LV++G G+V+
Sbjct: 62 FTLFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVVDKSGILVVSGTGEVI 121
Query: 129 EPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ ++AIGSGG+YALSA RAL SA+E+A +++ +A+DICV+TN NI++ETL
Sbjct: 122 APDDDIIAIGSGGNYALSAGRALKRHAAHLSAKEMAYESLKVASDICVFTNDNIIVETL 180
>gi|146329277|ref|YP_001210212.1| ATP-dependent protease peptidase subunit [Dichelobacter nodosus
VCS1703A]
gi|189028446|sp|A5EX24|HSLV_DICNV RecName: Full=ATP-dependent protease subunit HslV
gi|146232747|gb|ABQ13725.1| heat shock protein HslVU, protease HslV [Dichelobacter nodosus
VCS1703A]
Length = 180
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 101/174 (58%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H+TTIL+VR+ V IAGDGQVSLGQT+MK NARK+RRL I+AGFAG++ADAFTL E
Sbjct: 5 HSTTILSVRRGNHVAIAGDGQVSLGQTIMKGNARKIRRLYHDQILAGFAGATADAFTLFE 64
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
E KLE QLLR++VE+AK+WR D+ LR LEAM+++AD+ TL+++G GD++EPEN
Sbjct: 65 LFEGKLEAQDGQLLRAAVEMAKEWRTDRSLRRLEAMLIVADRNNTLILSGNGDIVEPENS 124
Query: 134 VMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ AIGSGG +A +T+ A IA K+++IAADIC+YTNHNIV + LK
Sbjct: 125 LAAIGSGGMYALAAARALYHNTEMDALSIAEKSLNIAADICIYTNHNIVSDELK 178
>gi|27467847|ref|NP_764484.1| ATP-dependent protease peptidase subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57866719|ref|YP_188401.1| ATP-dependent protease peptidase subunit [Staphylococcus
epidermidis RP62A]
gi|251810684|ref|ZP_04825157.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
epidermidis BCM-HMP0060]
gi|282876315|ref|ZP_06285182.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
epidermidis SK135]
gi|293366783|ref|ZP_06613459.1| heat shock protein HslVU [Staphylococcus epidermidis
M23864:W2(grey)]
gi|38258090|sp|Q8CPH1|HSLV_STAES RecName: Full=ATP-dependent protease subunit HslV
gi|71152140|sp|Q5HPT9|HSLV_STAEQ RecName: Full=ATP-dependent protease subunit HslV
gi|27315392|gb|AAO04526.1|AE016747_23 heat shock protein HslV [Staphylococcus epidermidis ATCC 12228]
gi|57637377|gb|AAW54165.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
epidermidis RP62A]
gi|251805844|gb|EES58501.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295340|gb|EFA87867.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
epidermidis SK135]
gi|291319084|gb|EFE59454.1| heat shock protein HslVU [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329724353|gb|EGG60865.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
epidermidis VCU144]
gi|329736215|gb|EGG72487.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
epidermidis VCU028]
gi|329736581|gb|EGG72847.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
epidermidis VCU045]
Length = 180
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 99/176 (56%), Positives = 135/176 (76%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+HATTI VR +G +AGDGQV+LGQ V MK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 5 LHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ +K L+++G G+V+ P+
Sbjct: 65 FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMNKDAILIVSGTGEVIAPD 124
Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ ++AIGSGG+YALSA RAL Q SA E+A +++ +AADICV+TN NI++ETL
Sbjct: 125 DDLIAIGSGGNYALSAGRALKRHAAQLSASEMAYESLKVAADICVFTNDNIIVETL 180
>gi|188590937|ref|YP_001795537.1| ATP-dependent protease peptidase subunit [Cupriavidus taiwanensis
LMG 19424]
gi|238065852|sp|B2AGB6|HSLV_CUPTR RecName: Full=ATP-dependent protease subunit HslV
gi|170937831|emb|CAP62815.1| peptidase component of the HslUV protease [Cupriavidus taiwanensis
LMG 19424]
Length = 178
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ G ++ GFAGS+ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRRIYNGKVLVGFAGSTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE+Y L R++V+LAKDWR D+ LR LEAM++ AD+ TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKYQGNLTRAAVDLAKDWRSDRALRRLEAMLITADRDTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAA+ALM +T+ + +++ KA++IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALMENTEMAPKDVVEKALTIAGELCIYTNTNFVIETLE 178
>gi|257869687|ref|ZP_05649340.1| 20S proteasome protein [Enterococcus gallinarum EG2]
gi|257803851|gb|EEV32673.1| 20S proteasome protein [Enterococcus gallinarum EG2]
Length = 180
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 92/176 (52%), Positives = 130/176 (73%), Gaps = 3/176 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
H+TTI V KDG +AGDGQV++G Q VMK ARKVRR+ G ++ GFAGS ADAFT
Sbjct: 4 PFHSTTICAVEKDGKFAMAGDGQVTMGEQVVMKGTARKVRRIYNGEVVVGFAGSVADAFT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ ++ L+++G G+V+ P
Sbjct: 64 LEEKFEGKLNEYNGNLQRAAVELAQEWRTQQSMQKLEAMLIVMNQEEMLLVSGTGEVISP 123
Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLET 184
+ G++AIGSGG+YAL+AARA+ SA+EIA A++IAADICV+TNHNI++E
Sbjct: 124 DEGILAIGSGGNYALAAARAMKRYGGDLSAKEIAEGALNIAADICVFTNHNIIVEE 179
>gi|284037605|ref|YP_003387535.1| 20S proteasome A and subunit betas [Spirosoma linguale DSM 74]
gi|283816898|gb|ADB38736.1| 20S proteasome A and B subunits [Spirosoma linguale DSM 74]
Length = 179
Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats.
Identities = 100/177 (56%), Positives = 136/177 (76%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
K+HATT++ +R +G V + DGQ ++G TV K+N RKVR L G ++AGFAGS+ADAFT
Sbjct: 3 PKIHATTVVGIRHNGHVALGADGQATMGNTVAKSNVRKVRVLMGGKVLAGFAGSTADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L+ER E+KL Y L R+++ELAKDWR D+YLR LEAM+++A K L+++G GDV+EP
Sbjct: 63 LIERFEEKLNAYGGNLKRAAIELAKDWRTDRYLRKLEAMLIVASKDDLLLVSGTGDVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V AIGSGG YA SAA AL +T+ SAEE+ R+++ IAAD+C+YTNHN+V+ETL
Sbjct: 123 DADVAAIGSGGMYAQSAALALKKHATELSAEEMVRESLHIAADVCIYTNHNLVVETL 179
>gi|21674018|ref|NP_662083.1| ATP-dependent protease peptidase subunit [Chlorobium tepidum TLS]
gi|25008570|sp|Q8KD62|HSLV_CHLTE RecName: Full=ATP-dependent protease subunit HslV
gi|21647166|gb|AAM72425.1| heat shock protein HslV [Chlorobium tepidum TLS]
Length = 181
Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats.
Identities = 98/179 (54%), Positives = 134/179 (74%), Gaps = 1/179 (0%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ ++ +TT++ + +DG + DGQ++LG TVMK + RK+R L +G I GFAG++AD
Sbjct: 3 YEKPQIRSTTVIGIIRDGKAALGSDGQMTLGNTVMKHSTRKIRSLYQGRFITGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
A TLL+R E KLE Y +L R++VELAKDWR DKYLR LEAM+ + L+I+G GDV
Sbjct: 63 ALTLLDRFESKLEAYSGKLDRAAVELAKDWRTDKYLRRLEAMLAVVSTDKALIISGTGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+EPE+G++AIGSG YAL+AAR+LM T SAEEI R+++ IAADIC+YTN +IV+ETL
Sbjct: 123 IEPEDGIVAIGSGSMYALAAARSLMKHTTLSAEEIVRESLQIAADICIYTNDHIVIETL 181
>gi|110637990|ref|YP_678197.1| ATP-dependent protease peptidase subunit [Cytophaga hutchinsonii
ATCC 33406]
gi|122966798|sp|Q11UQ9|HSLV_CYTH3 RecName: Full=ATP-dependent protease subunit HslV
gi|110280671|gb|ABG58857.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Cytophaga hutchinsonii ATCC 33406]
Length = 180
Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats.
Identities = 96/175 (54%), Positives = 134/175 (76%), Gaps = 2/175 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+HATT++ +R +G + I DGQ +LG TV+K +KVR+L +G ++ GFAGS+ADAFTL
Sbjct: 3 KIHATTVVAIRHNGQISIGADGQATLGNTVVKDYVKKVRKLMEGKVLCGFAGSTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LER E+KL Y + R+++ELAKDWR D+YLR LEAM+++ +K L+I+G GDV+EP+
Sbjct: 63 LERFEEKLNTYAGNMKRAAIELAKDWRTDRYLRKLEAMMIVVNKDELLLISGTGDVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
N +++IGSG YA SAA AL +T SA E+ R+++SIAADIC+YTNHN V+ET
Sbjct: 123 NDILSIGSGSMYAQSAAAALKKHATHLSAPEMVRESLSIAADICIYTNHNFVIET 177
>gi|296448578|ref|ZP_06890451.1| 20S proteasome A and B subunits [Methylosinus trichosporium OB3b]
gi|296253918|gb|EFH01072.1| 20S proteasome A and B subunits [Methylosinus trichosporium OB3b]
Length = 188
Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats.
Identities = 123/180 (68%), Positives = 146/180 (81%), Gaps = 4/180 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
HATTI+ V+K G VIAGDGQVSLGQT++KANA+KVRRLGKG++IAGFAG++ADAF
Sbjct: 9 PAVWHATTIVLVKKGGRTVIAGDGQVSLGQTIVKANAKKVRRLGKGDVIAGFAGATADAF 68
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ERLE KLEQYP QL R+ VELAKDWRMD+YLR LEAM+L+AD+ + L +TG GDVLE
Sbjct: 69 TLFERLEGKLEQYPGQLTRACVELAKDWRMDRYLRRLEAMMLVADREVGLTLTGAGDVLE 128
Query: 130 P----ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P V AIGSGG+YAL+AARAL+ T AE IAR+AM IAA+ICVYTN NIV+E +
Sbjct: 129 PQAFEHGSVAAIGSGGNYALAAARALLDTPLDAEPIARRAMEIAAEICVYTNTNIVVEAI 188
>gi|312797559|ref|YP_004030481.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
[Burkholderia rhizoxinica HKI 454]
gi|312169334|emb|CBW76337.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV (EC
3.4.25.-) [Burkholderia rhizoxinica HKI 454]
Length = 178
Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK A+KVRR+ G ++ GFAG +ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNSVALGGDGQVTLGNIVMKGGAKKVRRIYGGKVLVGFAGGTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE++ L R++VELAKDWR D+ LR LEAM++ AD TLVITG GDVL+PE
Sbjct: 63 LDRFEGKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADAETTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA +AARAL +T+ SA +I KA++IA D+C+YTNH+ V+ET++
Sbjct: 123 GGLCAIGSGGAYAQAAARALADNTELSARDIVEKALAIAGDMCIYTNHSRVIETIE 178
>gi|315027187|gb|EFT39119.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX2137]
Length = 194
Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats.
Identities = 90/178 (50%), Positives = 134/178 (75%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ ++ GFAGS ADAFT
Sbjct: 17 QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 76
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ +K L+++G G+V+ P
Sbjct: 77 LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 136
Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G +AIGSGG++ALSAARA+ + + A+EIA+ A++IAADICV+TNHNI++E L
Sbjct: 137 DDGFLAIGSGGNFALSAARAMKNFGDKEMPAKEIAKNALNIAADICVFTNHNIIVEEL 194
>gi|146296274|ref|YP_001180045.1| ATP-dependent protease peptidase subunit [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|189028423|sp|A4XIW9|HSLV_CALS8 RecName: Full=ATP-dependent protease subunit HslV
gi|145409850|gb|ABP66854.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 176
Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats.
Identities = 93/175 (53%), Positives = 126/175 (72%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ +MK NA+KVR++ G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGEKVAIAGDGQVTFSQNMIMKQNAKKVRKVYNGKVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++A+ V++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKILRRLEALMIVANSEHLFVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ + AIGSGG YAL+AARAL+ +T EIA+KA+ IAA IC+YTN+NI + L
Sbjct: 122 DNIAAIGSGGPYALAAARALVQNTNLEPAEIAKKALEIAASICIYTNNNITVLEL 176
>gi|332976817|gb|EGK13645.1| ATP-dependent protease HslVU [Desmospora sp. 8437]
Length = 176
Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats.
Identities = 97/176 (55%), Positives = 133/176 (75%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
MHATTI + +G IAGDGQV+ G VMK A+KVRRL +G ++AGFAGS ADA TL
Sbjct: 1 MHATTIFAIHHNGSGAIAGDGQVTFGNQMVMKHQAKKVRRLYRGQVVAGFAGSVADAVTL 60
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E +LE++ L R++VELAK+WR DK LR LEAM+++ D+ L+++G G+V+EP+
Sbjct: 61 FEKFEGRLEEFHGNLPRAAVELAKEWRADKVLRRLEAMLVVMDREHLLLVSGNGEVIEPD 120
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+MAIGSGGSYALSA RAL ++ +A EIA+ A++IA++ICV+TN IVLE +
Sbjct: 121 DGMMAIGSGGSYALSAGRALSRYASDLTAREIAKAALTIASEICVFTNDQIVLEEV 176
>gi|296126032|ref|YP_003633284.1| 20S proteasome A and B subunits [Brachyspira murdochii DSM 12563]
gi|296017848|gb|ADG71085.1| 20S proteasome A and B subunits [Brachyspira murdochii DSM 12563]
Length = 176
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 97/175 (55%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI V ++G+ IAGDGQV+LG+TVMK NA K+R+L G +I+GFAGS+ADAFTL
Sbjct: 2 FKGTTICAVCRNGITAIAGDGQVTLGETVMKPNAVKLRKLYGGKVISGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ EK+L+++ L R++VELA++WR DK LRNL+A+I++A K L+++G GDV+E EN
Sbjct: 62 EKFEKRLQEFSGDLTRAAVELAREWRTDKMLRNLQALIIVASKDKMLLLSGNGDVIESEN 121
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
++AIGSGG YA +AA AL +T SA+EIA+KA+ IA+ IC+YTN NI LE ++
Sbjct: 122 NILAIGSGGQYAKAAAMALCENTDLSAKEIAKKALEIASQICIYTNSNISLEVIE 176
>gi|113866230|ref|YP_724719.1| ATP-dependent protease peptidase subunit [Ralstonia eutropha H16]
gi|123134531|sp|Q0KF70|HSLV_RALEH RecName: Full=ATP-dependent protease subunit HslV
gi|113525006|emb|CAJ91351.1| ATP-dependent protease HslVU, peptidase subunit [Ralstonia eutropha
H16]
Length = 178
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 99/176 (56%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVRR+ G ++ GFAGS+ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRRIYNGKVLVGFAGSTADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KLE+Y L R++V+LAKDWR D+ LR LEAM++ AD+ TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLEKYQGNLTRAAVDLAKDWRSDRALRRLEAMLITADRDTTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAA+AL +T+ + +++ KA++IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALAENTEMAPKDVVEKALTIAGELCIYTNTNFVIETLE 178
>gi|328954141|ref|YP_004371475.1| ATP-dependent protease hslV [Desulfobacca acetoxidans DSM 11109]
gi|328454465|gb|AEB10294.1| ATP-dependent protease hslV [Desulfobacca acetoxidans DSM 11109]
Length = 183
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 100/174 (57%), Positives = 131/174 (75%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL VR+DG V +AGDGQV+L TVMK ARKVR++ G II GFAG++ADA +LL
Sbjct: 10 FRGTTILAVRRDGKVAVAGDGQVTLNNTVMKHRARKVRKIYNGKIIVGFAGATADALSLL 69
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KLE++ L R+ VELAKDWR DK LR LEA++L+ D+ +++G GDV+EP++
Sbjct: 70 ERFESKLEKHQGNLTRAVVELAKDWRTDKILRRLEALLLVVDRDNFFLLSGSGDVIEPDD 129
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VMAIGSGG+YA +AA+AL+ T SAEEI R+AM IAA +C++TN+ + LE L
Sbjct: 130 EVMAIGSGGAYAQAAAQALVQHTTMSAEEICREAMQIAAGLCIFTNNQLTLEEL 183
>gi|303327044|ref|ZP_07357486.1| ATP-dependent protease HslV [Desulfovibrio sp. 3_1_syn3]
gi|302863032|gb|EFL85964.1| ATP-dependent protease HslV [Desulfovibrio sp. 3_1_syn3]
Length = 177
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 98/177 (55%), Positives = 131/177 (74%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ HATTIL V+K G V +AGDGQV+LGQT +MK A+KVRRL +G I+AGFAG++ADAF
Sbjct: 1 MDTHATTILAVKKGGHVAMAGDGQVTLGQTMIMKHTAQKVRRLYEGRILAGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E E KL++ LLR++VE+ K+WR DKYLR LEAM+L+AD LV++G GDV+E
Sbjct: 61 TLFELFETKLKEVHGNLLRAAVEMTKEWRKDKYLRKLEAMLLLADNEHLLVVSGTGDVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ V AIGSGG Y +A + AE +AR++M IA++ICVYTN ++ +ETL
Sbjct: 121 PDDDVAAIGSGGPYALAAARALTRHSDLDAESVARESMRIASEICVYTNGHLTVETL 177
>gi|303248942|ref|ZP_07335189.1| 20S proteasome A and B subunits [Desulfovibrio fructosovorans JJ]
gi|302489665|gb|EFL49601.1| 20S proteasome A and B subunits [Desulfovibrio fructosovorans JJ]
Length = 179
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 101/178 (56%), Positives = 130/178 (73%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+ + TTIL VR D V +AGDGQV+LGQ+V MK ARKVRR+ + ++ GFAGS+ADAF
Sbjct: 1 MDLRGTTILAVRTDAGVAVAGDGQVTLGQSVAMKHGARKVRRIYQDKVVIGFAGSTADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER E KLE++ L+R+SVELAKDWR DKYLR LEAM+++AD L+++G GDV+E
Sbjct: 61 TLFERFEAKLEEFSGNLVRASVELAKDWRKDKYLRRLEAMLIVADAGNVLLLSGNGDVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P++GV AIGSGG Y +A L +T EI KAM IA++ICVYTN IV+ET+
Sbjct: 121 PDDGVAAIGSGGPYALAAARALLRNTDMGPREIVEKAMGIASEICVYTNDRIVVETID 178
>gi|84514933|ref|ZP_01002296.1| ATP-dependent protease peptidase subunit [Loktanella vestfoldensis
SKA53]
gi|84511092|gb|EAQ07546.1| ATP-dependent protease peptidase subunit [Loktanella vestfoldensis
SKA53]
Length = 189
Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats.
Identities = 126/187 (67%), Positives = 149/187 (79%), Gaps = 3/187 (1%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NII 58
MV M ++ H TTI+ VRKDG VVIAGDGQVSLGQTV+K ARKVRRL G ++I
Sbjct: 3 MVTMAQDNFP-GWHGTTIIGVRKDGKVVIAGDGQVSLGQTVIKGTARKVRRLSPGGQDVI 61
Query: 59 AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
GFAGS+ADAFTLLERLEKKLE P QL R+SVELAKDWR DKYL+ LEAM++++D
Sbjct: 62 CGFAGSTADAFTLLERLEKKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGKDL 121
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH 178
LVITG GDVLEPE+ V AIGSGG+YAL+A RALM + SAEEIAR+AM+IAADICVYTN
Sbjct: 122 LVITGAGDVLEPEHDVTAIGSGGNYALAAGRALMDSDLSAEEIARRAMAIAADICVYTNG 181
Query: 179 NIVLETL 185
+ +E++
Sbjct: 182 KLTVESI 188
>gi|295698590|ref|YP_003603245.1| ATP-dependent protease HslV [Candidatus Riesia pediculicola USDA]
gi|291157475|gb|ADD79920.1| ATP-dependent protease HslV [Candidatus Riesia pediculicola USDA]
Length = 176
Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats.
Identities = 88/174 (50%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VVI GDGQ ++G T++K N +K+RRL +IAGFAG +ADAF L +
Sbjct: 2 TTIISVRRSGSVVIGGDGQATMGNTIIKGNVKKIRRLYHERVIAGFAGGTADAFALFDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKK+E L++++VEL K+WR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62 EKKIEICQGHLVKAAVELTKEWRTDRMLRRLEAILAVADRTNSLIITGNGDVIQPESSLI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG Y +AA+A++ +TQ SA +I KA+ IA++IC+YTNHN E +
Sbjct: 122 AIGSGGPYGKAAAKAMLENTQMSARDITEKALKIASEICIYTNHNFNFEEISSN 175
>gi|302343316|ref|YP_003807845.1| 20S proteasome A and B subunits [Desulfarculus baarsii DSM 2075]
gi|301639929|gb|ADK85251.1| 20S proteasome A and B subunits [Desulfarculus baarsii DSM 2075]
Length = 180
Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats.
Identities = 102/177 (57%), Positives = 134/177 (75%), Gaps = 1/177 (0%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ ++ +TT+L ++KDG VV+AGDGQV++GQTV+KA ARKVRRL G ++AGFAG++ADAF
Sbjct: 4 SAEVRSTTVLALKKDGKVVMAGDGQVTMGQTVVKATARKVRRLHNGRVLAGFAGATADAF 63
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ERLE KLE + QL R++VELAKDWR DK LR LEA+++ AD+ L+I+G GDV++
Sbjct: 64 TLFERLEGKLEAHSGQLPRAAVELAKDWRTDKMLRRLEALLIAADREHLLIISGSGDVID 123
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
PE GV AIGSGG Y +A + + E I R AM +AADIC+YTNH IV+E L
Sbjct: 124 PEEGVAAIGSGGPYALAAARALMAHSPLDPERIVRAAMDVAADICIYTNHQIVVEAL 180
>gi|17544762|ref|NP_518164.1| ATP-dependent protease peptidase subunit [Ralstonia solanacearum
GMI1000]
gi|21759166|sp|Q8Y3D7|HSLV_RALSO RecName: Full=ATP-dependent protease subunit HslV
gi|17427051|emb|CAD13571.1| probable atp-dependent protease hslv protein [Ralstonia
solanacearum GMI1000]
Length = 178
Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats.
Identities = 97/176 (55%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVR + G ++ GFAG++ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIYDGKVLVGFAGATADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KL++Y LLR++V+LAKDWR D+ LR+LEAM+++AD+ TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAA+ALM +T+ + ++ K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALMENTELAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178
>gi|222475431|ref|YP_002563848.1| heat shock protein (hslV) [Anaplasma marginale str. Florida]
gi|222419569|gb|ACM49592.1| heat shock protein (hslV) [Anaplasma marginale str. Florida]
Length = 210
Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats.
Identities = 106/190 (55%), Positives = 149/190 (78%), Gaps = 6/190 (3%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
++ + M+ TTIL +R+ G V+IAGDGQVS+G +MK +A+K++RL ++I GFA
Sbjct: 20 LVMSHRDSYTMYGTTILCIRQGGSVIIAGDGQVSMGSAIMKTSAKKIKRLAGDSVITGFA 79
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL ERLE KLE++P QL+R+ VELAKDWR DKYLR LEAM+++ADK+++L+I+
Sbjct: 80 GATADAFTLFERLEAKLEKHPGQLMRACVELAKDWRRDKYLRRLEAMMIVADKSVSLIIS 139
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST------QNSAEEIARKAMSIAADICVYT 176
G GDVLEPENG+ AIGSGG++ALSAARAL + + E IA AM++A++ICVYT
Sbjct: 140 GGGDVLEPENGIAAIGSGGNFALSAARALCAARDELSLDMTLEYIATAAMAVASEICVYT 199
Query: 177 NHNIVLETLK 186
N+NI++E ++
Sbjct: 200 NNNIIMEKIE 209
>gi|83748662|ref|ZP_00945680.1| ATP-dependent protease hslV [Ralstonia solanacearum UW551]
gi|207727529|ref|YP_002255923.1| atp-dependent protease hslv protein [Ralstonia solanacearum MolK2]
gi|207741921|ref|YP_002258313.1| atp-dependent protease hslv protein [Ralstonia solanacearum
IPO1609]
gi|300705553|ref|YP_003747156.1| peptidase component of the hsluv protease [Ralstonia solanacearum
CFBP2957]
gi|83724706|gb|EAP71866.1| ATP-dependent protease hslV [Ralstonia solanacearum UW551]
gi|206590766|emb|CAQ56378.1| atp-dependent protease hslv protein [Ralstonia solanacearum MolK2]
gi|206593307|emb|CAQ60234.1| atp-dependent protease hslv protein [Ralstonia solanacearum
IPO1609]
gi|299073217|emb|CBJ44575.1| peptidase component of the HslUV protease [Ralstonia solanacearum
CFBP2957]
Length = 178
Score = 271 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 96/176 (54%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK +ARKVR + G ++ GFAG++ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGSARKVRTIYDGKVLVGFAGATADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KL++Y LLR++V+LAKDWR D+ LR+LEAM+++AD+ TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAA+AL+ +T+ + ++ K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALVENTELAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178
>gi|308051234|ref|YP_003914800.1| HslV component of HslUV peptidase [Ferrimonas balearica DSM 9799]
gi|307633424|gb|ADN77726.1| HslV component of HslUV peptidase [Ferrimonas balearica DSM 9799]
Length = 178
Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats.
Identities = 95/173 (54%), Positives = 128/173 (73%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VVIAGDGQVSLG TVMK NARKVR L G ++AGFAG++ADAFTL E L
Sbjct: 2 TTIVSVRRGDKVVIAGDGQVSLGNTVMKGNARKVRHLHGGKVLAGFAGATADAFTLFELL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KL + L R++VELAK WR ++ L+ LEAM+++AD +L+I+G GDV+EPE+ ++
Sbjct: 62 ESKLTAHQGHLTRAAVELAKAWRTERSLQKLEAMLIVADAETSLLISGNGDVVEPEHDII 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
AIGSGG+YA +A AL+ +T A +I KA++IA +ICV+TN +E L
Sbjct: 122 AIGSGGNYAQAAGLALLQNTDLGARDICEKALTIAGEICVFTNLTQTIEELDA 174
>gi|167037675|ref|YP_001665253.1| ATP-dependent protease peptidase subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|307264859|ref|ZP_07546421.1| 20S proteasome A and B subunits [Thermoanaerobacter wiegelii
Rt8.B1]
gi|320116090|ref|YP_004186249.1| 20S proteasome subunits A/B [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|326389489|ref|ZP_08211056.1| 20S proteasome, A and B subunits [Thermoanaerobacter ethanolicus JW
200]
gi|238065943|sp|B0K9V4|HSLV_THEP3 RecName: Full=ATP-dependent protease subunit HslV
gi|166856509|gb|ABY94917.1| ATP-dependent protease HslVU (ClpYQ) peptidase subunit-like protein
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|306920117|gb|EFN50329.1| 20S proteasome A and B subunits [Thermoanaerobacter wiegelii
Rt8.B1]
gi|319929181|gb|ADV79866.1| 20S proteasome A and B subunits [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|325994494|gb|EGD52919.1| 20S proteasome, A and B subunits [Thermoanaerobacter ethanolicus JW
200]
Length = 176
Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats.
Identities = 94/175 (53%), Positives = 129/175 (73%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ VRK V +AGDGQ++ G T++K A+K+RRL G +I GFAGS ADA TL
Sbjct: 2 FKGTTIIAVRKGDKVSVAGDGQITFGENTILKHGAKKIRRLYNGEVIVGFAGSVADALTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E+KLEQY L R++VELA++WR DK LR LEA+++ DK TL+I+G G+V+EP+
Sbjct: 62 SQKFEEKLEQYGGNLKRAAVELAQEWRKDKILRKLEALLIAVDKKDTLLISGTGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ IGSGG+YA++AA AL +T E+IA+KA+ IA+ ICVYTN+NI +ETL
Sbjct: 122 EDVIGIGSGGNYAMAAALALRYNTDLDTEDIAKKALEIASKICVYTNNNITVETL 176
>gi|228474958|ref|ZP_04059686.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
hominis SK119]
gi|314936586|ref|ZP_07843933.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
hominis subsp. hominis C80]
gi|228270943|gb|EEK12331.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
hominis SK119]
gi|313655205|gb|EFS18950.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
hominis subsp. hominis C80]
Length = 181
Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats.
Identities = 97/180 (53%), Positives = 135/180 (75%), Gaps = 3/180 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSAD 67
+HATTI VR +G +AGDGQV+LG+ V MK ARKVRRL +G ++AGFAGS AD
Sbjct: 2 SKTSLHATTIYAVRHNGEAAMAGDGQVTLGEQVIMKQTARKVRRLYEGKVLAGFAGSVAD 61
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ DK LV++G G+V
Sbjct: 62 AFTLFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDGILVVSGTGEV 121
Query: 128 LEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ P++ ++AIGSGG+YALSA RAL +A+E+A +++ +A+DICV+TN NI++ETL
Sbjct: 122 IAPDDDLIAIGSGGNYALSAGRALKRHASHMTAKEMAYESLKVASDICVFTNDNIIVETL 181
>gi|94264968|ref|ZP_01288739.1| 20S proteasome, A and B subunits [delta proteobacterium MLMS-1]
gi|94268396|ref|ZP_01291164.1| 20S proteasome, A and B subunits [delta proteobacterium MLMS-1]
gi|93451623|gb|EAT02418.1| 20S proteasome, A and B subunits [delta proteobacterium MLMS-1]
gi|93454571|gb|EAT04849.1| 20S proteasome, A and B subunits [delta proteobacterium MLMS-1]
Length = 176
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 91/176 (51%), Positives = 133/176 (75%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ + +TT++ +R G V +AGDGQV++G V+K ARK+RRL G +I GFAG++ADAFT
Sbjct: 1 MDIRSTTVVAIRHRGQVAMAGDGQVTMGNVVVKHQARKIRRLYHGKVITGFAGATADAFT 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+LE++LE+Y LLR++VELAK+WR D+ LR LEA+++ AD +L+I+G GDV+EP
Sbjct: 61 LFEKLEQQLEKYGGNLLRAAVELAKEWRTDRMLRRLEALLVAADAERSLLISGNGDVIEP 120
Query: 131 ENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGGSYA +AA+ L ++ A EI R ++ IA ++C+YTN I LE L
Sbjct: 121 DDGILAIGSGGSYAHAAAKGLVAHSELEAAEICRASLGIAGELCIYTNEQIQLEIL 176
>gi|225621069|ref|YP_002722327.1| ATP-dependent protease peptidase subunit [Brachyspira
hyodysenteriae WA1]
gi|225215889|gb|ACN84623.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Brachyspira hyodysenteriae WA1]
Length = 182
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 99/175 (56%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI V +DGV IAGDGQV+LG+TVMK NA K+R+L G +I+GFAGS+ADAFTL
Sbjct: 8 FKGTTICAVCRDGVTAIAGDGQVTLGETVMKPNAVKLRKLYGGKVISGFAGSTADAFTLF 67
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ EK+L+++ L R++VELA++WR DK LRNL+A+I++A K L+++G GDV+E EN
Sbjct: 68 EKFEKRLQEFSGDLTRAAVELAREWRTDKMLRNLQALIIVASKEKMLLLSGNGDVIESEN 127
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
++AIGSGG YA +AA AL +T SA+EIARK++ IA+ IC+YTN NI LE ++
Sbjct: 128 NILAIGSGGQYAKAAAMALSENTDLSAKEIARKSLEIASKICIYTNSNISLEVIE 182
>gi|315640717|ref|ZP_07895819.1| heat shock protein HslV [Enterococcus italicus DSM 15952]
gi|315483472|gb|EFU73966.1| heat shock protein HslV [Enterococcus italicus DSM 15952]
Length = 180
Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats.
Identities = 92/175 (52%), Positives = 131/175 (74%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
H+TTI V KDG +AGDGQV++G Q VMK ARKVRR+ ++ GFAGS ADAFTL
Sbjct: 5 FHSTTICAVEKDGKFAMAGDGQVTMGEQIVMKGTARKVRRIYNNQVVVGFAGSVADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KL +Y L R++VELA++WR + ++ LEAM+++ ++ L+++G G+V+ P+
Sbjct: 65 EEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNEKEMLLVSGTGEVIAPD 124
Query: 132 NGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLET 184
+G++AIGSGG+YALSAARA+ + SA+EIA A++IAADICV+TNHNI++E
Sbjct: 125 DGILAIGSGGNYALSAARAMKAYSPALSAKEIAENALNIAADICVFTNHNIIVEE 179
>gi|289578440|ref|YP_003477067.1| 20S proteasome A and subunit betas [Thermoanaerobacter italicus
Ab9]
gi|297544716|ref|YP_003677018.1| 20S proteasome A and B subunits [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|289528153|gb|ADD02505.1| 20S proteasome A and B subunits [Thermoanaerobacter italicus Ab9]
gi|296842491|gb|ADH61007.1| 20S proteasome A and B subunits [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 176
Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats.
Identities = 95/175 (54%), Positives = 130/175 (74%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ VRK V +AGDGQ++LG T++K A+K+RRL G +I GFAGS ADA TL
Sbjct: 2 FKGTTIIAVRKGNKVSVAGDGQITLGENTILKHGAKKIRRLYNGEVIVGFAGSVADALTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E+KLEQY L R++VELA++WR DK LR LEA+++ DK TL+I+G G+V+EP+
Sbjct: 62 SQKFEEKLEQYGGNLKRAAVELAQEWRKDKILRKLEALLIAVDKKNTLLISGTGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ IGSGG+YA++AA AL +T E+IA+KA+ IA+ ICVYTN+NI +ETL
Sbjct: 122 EDVIGIGSGGNYAMAAALALRYNTNLDTEDIAKKALEIASKICVYTNNNITVETL 176
>gi|241664960|ref|YP_002983320.1| ATP-dependent protease peptidase subunit [Ralstonia pickettii 12D]
gi|240866987|gb|ACS64648.1| 20S proteasome A and B subunits [Ralstonia pickettii 12D]
Length = 178
Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats.
Identities = 97/176 (55%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK +ARKVR + G ++ GFAG++ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGSARKVRAIYDGKVLVGFAGATADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KL+++ LLRS+V+LAKDWR D+ LR+LEAM+++AD+ TL+ITG GDVL+PE
Sbjct: 63 LDRFEAKLQKHQGNLLRSAVDLAKDWRTDRALRHLEAMLIVADREATLIITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA SAA+ALM +T + ++ K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGSYAQSAAKALMENTDLAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178
>gi|257867812|ref|ZP_05647465.1| 20S proteasome protein [Enterococcus casseliflavus EC30]
gi|257874139|ref|ZP_05653792.1| 20S proteasome protein [Enterococcus casseliflavus EC10]
gi|257876704|ref|ZP_05656357.1| 20S proteasome protein [Enterococcus casseliflavus EC20]
gi|325570910|ref|ZP_08146559.1| heat shock protein HslV [Enterococcus casseliflavus ATCC 12755]
gi|257801895|gb|EEV30798.1| 20S proteasome protein [Enterococcus casseliflavus EC30]
gi|257808303|gb|EEV37125.1| 20S proteasome protein [Enterococcus casseliflavus EC10]
gi|257810870|gb|EEV39690.1| 20S proteasome protein [Enterococcus casseliflavus EC20]
gi|325156314|gb|EGC68497.1| heat shock protein HslV [Enterococcus casseliflavus ATCC 12755]
Length = 180
Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats.
Identities = 93/176 (52%), Positives = 131/176 (74%), Gaps = 3/176 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI V KDG +AGDGQV++G Q VMK ARKVRR+ G +I GFAGS ADAFT
Sbjct: 4 EFHSTTICAVEKDGKFAMAGDGQVTMGEQVVMKGTARKVRRIYNGEVIVGFAGSVADAFT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ + L+++G G+V+ P
Sbjct: 64 LEEKFEGKLNEYNGNLQRAAVELAQEWRTQQSMQKLEAMLIVMNDKEMLLVSGTGEVISP 123
Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLET 184
+ G++AIGSGG+YAL+AARA+ + SA+EIA A++IAADICV+TNHNI++E
Sbjct: 124 DEGILAIGSGGNYALAAARAMKRYGGELSAKEIAEGALNIAADICVFTNHNIIVEE 179
>gi|227885326|ref|ZP_04003131.1| ATP-dependent protease peptidase subunit [Escherichia coli 83972]
gi|300819904|ref|ZP_07100088.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 107-1]
gi|300825077|ref|ZP_07105172.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 119-7]
gi|300899910|ref|ZP_07118118.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 198-1]
gi|300919130|ref|ZP_07135667.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 115-1]
gi|300931626|ref|ZP_07146936.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 187-1]
gi|300938384|ref|ZP_07153131.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 21-1]
gi|300948288|ref|ZP_07162403.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 116-1]
gi|300954661|ref|ZP_07167102.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 175-1]
gi|300975843|ref|ZP_07173192.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 45-1]
gi|300986109|ref|ZP_07177723.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 200-1]
gi|301022812|ref|ZP_07186653.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 69-1]
gi|301048654|ref|ZP_07195666.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 185-1]
gi|301303410|ref|ZP_07209534.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 124-1]
gi|301645123|ref|ZP_07245081.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 146-1]
gi|309783875|ref|ZP_07678520.1| ATP-dependent protease hslV [Shigella dysenteriae 1617]
gi|309796645|ref|ZP_07691051.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 145-7]
gi|312971780|ref|ZP_07785954.1| ATP-dependent protease hslV [Escherichia coli 1827-70]
gi|227837702|gb|EEJ48168.1| ATP-dependent protease peptidase subunit [Escherichia coli 83972]
gi|300299521|gb|EFJ55906.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 185-1]
gi|300306417|gb|EFJ60937.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 200-1]
gi|300318372|gb|EFJ68156.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 175-1]
gi|300356538|gb|EFJ72408.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 198-1]
gi|300397361|gb|EFJ80899.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 69-1]
gi|300410196|gb|EFJ93734.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 45-1]
gi|300413764|gb|EFJ97074.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 115-1]
gi|300452189|gb|EFK15809.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 116-1]
gi|300456654|gb|EFK20147.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 21-1]
gi|300460590|gb|EFK24083.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 187-1]
gi|300522429|gb|EFK43498.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 119-7]
gi|300527544|gb|EFK48606.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 107-1]
gi|300841364|gb|EFK69124.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 124-1]
gi|301076550|gb|EFK91356.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 146-1]
gi|308119801|gb|EFO57063.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 145-7]
gi|308928246|gb|EFP73708.1| ATP-dependent protease hslV [Shigella dysenteriae 1617]
gi|310334157|gb|EFQ00362.1| ATP-dependent protease hslV [Escherichia coli 1827-70]
gi|315254305|gb|EFU34273.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 85-1]
gi|315292704|gb|EFU52056.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 153-1]
gi|315298415|gb|EFU57670.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 16-3]
gi|315617727|gb|EFU98332.1| ATP-dependent protease hslV [Escherichia coli 3431]
gi|320175374|gb|EFW50477.1| ATP-dependent protease HslV [Shigella dysenteriae CDC 74-1112]
gi|320180701|gb|EFW55627.1| ATP-dependent protease HslV [Shigella boydii ATCC 9905]
gi|320184936|gb|EFW59720.1| ATP-dependent protease HslV [Shigella flexneri CDC 796-83]
gi|320190968|gb|EFW65618.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC1212]
gi|320196804|gb|EFW71426.1| ATP-dependent protease HslV [Escherichia coli WV_060327]
gi|323153991|gb|EFZ40200.1| ATP-dependent protease hslV [Escherichia coli EPECa14]
gi|323161166|gb|EFZ47083.1| ATP-dependent protease hslV [Escherichia coli E128010]
gi|323167401|gb|EFZ53109.1| ATP-dependent protease hslV [Shigella sonnei 53G]
gi|323174330|gb|EFZ59956.1| ATP-dependent protease hslV [Escherichia coli LT-68]
gi|323182345|gb|EFZ67754.1| ATP-dependent protease hslV [Escherichia coli 1357]
gi|323189646|gb|EFZ74925.1| ATP-dependent protease hslV [Escherichia coli RN587/1]
gi|324006728|gb|EGB75947.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 57-2]
gi|324012499|gb|EGB81718.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 60-1]
gi|324020555|gb|EGB89774.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 117-3]
gi|325499330|gb|EGC97189.1| ATP-dependent protease peptidase subunit [Escherichia fergusonii
ECD227]
gi|326338055|gb|EGD61885.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. 1044]
gi|332084173|gb|EGI89378.1| ATP-dependent protease hslV [Shigella boydii 5216-82]
gi|332085169|gb|EGI90347.1| ATP-dependent protease hslV [Shigella dysenteriae 155-74]
gi|332088327|gb|EGI93447.1| ATP-dependent protease hslV [Shigella boydii 3594-74]
gi|332751578|gb|EGJ81977.1| ATP-dependent protease hslV [Shigella flexneri 4343-70]
gi|332764528|gb|EGJ94760.1| ATP-dependent protease subunit HslV [Shigella flexneri 2930-71]
gi|332997991|gb|EGK17597.1| ATP-dependent protease hslV [Shigella flexneri VA-6]
gi|332998438|gb|EGK18036.1| ATP-dependent protease hslV [Shigella flexneri K-272]
gi|333014131|gb|EGK33488.1| ATP-dependent protease hslV [Shigella flexneri K-227]
Length = 164
Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats.
Identities = 96/160 (60%), Positives = 124/160 (77%), Gaps = 1/160 (0%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L+
Sbjct: 2 VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLV 61
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
+++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62 KAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAA 121
Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
ARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 ARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEELS 161
>gi|187930770|ref|YP_001901257.1| ATP-dependent protease peptidase subunit [Ralstonia pickettii 12J]
gi|309780234|ref|ZP_07674985.1| ATP-dependent protease HslV [Ralstonia sp. 5_7_47FAA]
gi|238065931|sp|B2U7X2|HSLV_RALPJ RecName: Full=ATP-dependent protease subunit HslV
gi|187727660|gb|ACD28825.1| 20S proteasome A and B subunits [Ralstonia pickettii 12J]
gi|308920937|gb|EFP66583.1| ATP-dependent protease HslV [Ralstonia sp. 5_7_47FAA]
Length = 178
Score = 270 bits (692), Expect = 6e-71, Method: Composition-based stats.
Identities = 98/176 (55%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK +ARKVR + G ++ GFAG++ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGSARKVRAIYDGKVLVGFAGATADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KL+++ LLRS+V+LAKDWR D+ LR+LEAM+++AD+ TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLQKHQGNLLRSAVDLAKDWRTDRALRHLEAMLIVADREATLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGGSYA SAA+ALM +T + ++ K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGSYAQSAAKALMENTDLAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178
>gi|193212785|ref|YP_001998738.1| ATP-dependent protease peptidase subunit [Chlorobaculum parvum NCIB
8327]
gi|238692641|sp|B3QNN5|HSLV_CHLP8 RecName: Full=ATP-dependent protease subunit HslV
gi|193086262|gb|ACF11538.1| 20S proteasome A and B subunits [Chlorobaculum parvum NCIB 8327]
Length = 181
Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats.
Identities = 98/179 (54%), Positives = 131/179 (73%), Gaps = 1/179 (0%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
++ +TT+L V +DG + DGQ++LG TVMK + RK+R L +G + GFAG++AD
Sbjct: 3 QQKPQIRSTTVLGVLRDGKAALGSDGQMTLGNTVMKHSTRKIRSLYQGKFVTGFAGATAD 62
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
A TLLER E KLE Y +L R++VELAKDWR DKYLR LEAM+ + L+I+G GDV
Sbjct: 63 ALTLLERFEAKLEAYSGRLDRAAVELAKDWRTDKYLRRLEAMLAVVSSDKALIISGTGDV 122
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+EPE+G++AIGSG YAL+AARALM T SAEEI R+++ AA+IC+YTN +I +ETL
Sbjct: 123 IEPEDGIVAIGSGSMYALAAARALMKHTTLSAEEIVRESLQTAAEICIYTNDHIAIETL 181
>gi|239908472|ref|YP_002955214.1| ATP-dependent protease HslV [Desulfovibrio magneticus RS-1]
gi|259491386|sp|C4XN25|HSLV_DESMR RecName: Full=ATP-dependent protease subunit HslV
gi|239798339|dbj|BAH77328.1| ATP-dependent protease HslV [Desulfovibrio magneticus RS-1]
Length = 181
Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats.
Identities = 98/180 (54%), Positives = 135/180 (75%), Gaps = 2/180 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTI+ VR + V +AGDGQV+LGQ + +K ARKVRR+ K ++ GFAG++ADAF
Sbjct: 1 MQLRGTTIVAVRTEAGVAVAGDGQVTLGQAIAVKHTARKVRRMYKDKVVIGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER E KLE++ L+R+SVELAKDWR DKYLR LEAM+++AD L+++G GDV+E
Sbjct: 61 TLFERFEAKLEEFGGNLVRASVELAKDWRKDKYLRRLEAMMIVADAGNVLILSGTGDVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
P++GV AIGSGG Y +A L +T+ SA EI K+M+IAA++CVYTN +V+ETL+
Sbjct: 121 PDDGVAAIGSGGPYAMAAARALLRNTELSAREIVEKSMAIAAEMCVYTNDQLVVETLEKP 180
>gi|315289637|gb|EFU49030.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 110-3]
Length = 164
Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats.
Identities = 96/160 (60%), Positives = 124/160 (77%), Gaps = 1/160 (0%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L+
Sbjct: 2 VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLI 61
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
+++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62 KAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAA 121
Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
ARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 ARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEELS 161
>gi|83816553|ref|YP_445762.1| ATP-dependent protease peptidase subunit [Salinibacter ruber DSM
13855]
gi|83757947|gb|ABC46060.1| heat shock protein [Salinibacter ruber DSM 13855]
Length = 213
Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats.
Identities = 91/179 (50%), Positives = 131/179 (73%), Gaps = 2/179 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATT+L VR +G + + DGQ ++ +TV+K A KVR L G+I+AGFAGS+ADAFTL E
Sbjct: 35 HATTVLGVRHNGQIALGSDGQATMNETVVKHKAEKVRSLYDGDILAGFAGSTADAFTLFE 94
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
R E+KL++Y + R++VELAK+WR DKYLR LEA++ +A L+I+G GDV+EP++
Sbjct: 95 RFEEKLQEYGGNVARAAVELAKEWRTDKYLRRLEALLAVASPGELLLISGAGDVIEPDDD 154
Query: 134 VMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
++AIGSGGS+AL+A+RAL+ +A +I +SIAADIC+YTNHN + ++ +
Sbjct: 155 IIAIGSGGSFALAASRALLQNAQGLTARDIVENGLSIAADICIYTNHNRTIRDIEAESD 213
>gi|124268573|ref|YP_001022577.1| ATP-dependent protease peptidase subunit [Methylibium
petroleiphilum PM1]
gi|166222986|sp|A2SLA3|HSLV_METPP RecName: Full=ATP-dependent protease subunit HslV
gi|124261348|gb|ABM96342.1| putative heat shock protein [Methylibium petroleiphilum PM1]
Length = 185
Score = 270 bits (690), Expect = 9e-71, Method: Composition-based stats.
Identities = 90/178 (50%), Positives = 127/178 (71%), Gaps = 1/178 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL+VR+ V + GDGQV+LG V+KA+ARKVRRL K ++AGFAG++ADAFTL
Sbjct: 4 YHGTTILSVRRGREVALGGDGQVTLGSIVVKASARKVRRLYKEQVLAGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KLE++ L+R++++L +DWR D+ LR LEAM+ +AD+ +L+ITG GDVLEPE+
Sbjct: 64 ERFEGKLEKHQGNLVRAAIDLTRDWRTDRVLRRLEAMLAVADRDTSLIITGNGDVLEPEH 123
Query: 133 GVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
G++AIGSGG +A L T E+ +K++ IA D+C+YTN + +E L +
Sbjct: 124 GIVAIGSGGAYAQAAARALLAHTTLGPAEMVKKSLEIAGDLCIYTNQHHTIEVLTDPE 181
>gi|221061613|ref|XP_002262376.1| Heat shock protein hslv [Plasmodium knowlesi strain H]
gi|193811526|emb|CAQ42254.1| Heat shock protein hslv, putative [Plasmodium knowlesi strain H]
Length = 208
Score = 270 bits (690), Expect = 9e-71, Method: Composition-based stats.
Identities = 101/173 (58%), Positives = 134/173 (77%), Gaps = 2/173 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL VRK+ V + GDG VS G ++K NA+K+RRL K NI+ GFAG++AD FTLL+
Sbjct: 37 HGTTILCVRKNNEVCLIGDGMVSQGTMIVKGNAKKIRRL-KDNILMGFAGATADCFTLLD 95
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
+ E K+++YPNQLLRS VELAK WR D+YLR+LEA++++ADK + L +TG GDVLEP
Sbjct: 96 KFETKIDEYPNQLLRSCVELAKLWRTDRYLRHLEAVLIVADKDVLLEVTGNGDVLEPSGN 155
Query: 134 VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ GSGG YA++AARAL + SA++IA KAM+IAAD+C +TN+N + ETL
Sbjct: 156 VLGTGSGGPYAIAAARALYDVENLSAKDIAYKAMNIAADMCCHTNNNFICETL 208
>gi|110597420|ref|ZP_01385707.1| 20S proteasome, A and B subunits [Chlorobium ferrooxidans DSM
13031]
gi|110340964|gb|EAT59435.1| 20S proteasome, A and B subunits [Chlorobium ferrooxidans DSM
13031]
Length = 182
Score = 270 bits (690), Expect = 9e-71, Method: Composition-based stats.
Identities = 95/183 (51%), Positives = 137/183 (74%), Gaps = 2/183 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + + + +TT++ V +DG + DGQ++LG TV+K + RK+RRL +G +IAGFAG
Sbjct: 1 MKNNEKPI-IRSTTVIGVLRDGKAALGSDGQMTLGNTVIKHSTRKIRRLYQGKLIAGFAG 59
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADA TLL+R E+KLE Y +L R++VELAK+WR DKYLR LEAM+ I L+I+G
Sbjct: 60 ATADAVTLLDRFEEKLEAYNGKLDRAAVELAKEWRTDKYLRRLEAMLAIVSSDKALIISG 119
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVL 182
GDV+EPE+G++AIGSG YALSAARALM + SA +I ++++ IA+DIC+YTN +I++
Sbjct: 120 TGDVIEPEDGIVAIGSGSMYALSAARALMKHSSLSARDIVQESLKIASDICIYTNDHIIV 179
Query: 183 ETL 185
E +
Sbjct: 180 EEV 182
>gi|167040336|ref|YP_001663321.1| ATP-dependent protease peptidase subunit [Thermoanaerobacter sp.
X514]
gi|256750732|ref|ZP_05491617.1| 20S proteasome A and B subunits [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914420|ref|ZP_07131736.1| 20S proteasome A and B subunits [Thermoanaerobacter sp. X561]
gi|307724344|ref|YP_003904095.1| 20S proteasome subunits A/B [Thermoanaerobacter sp. X513]
gi|238065944|sp|B0K1T7|HSLV_THEPX RecName: Full=ATP-dependent protease subunit HslV
gi|166854576|gb|ABY92985.1| 20S proteasome, A and B subunits [Thermoanaerobacter sp. X514]
gi|256750315|gb|EEU63334.1| 20S proteasome A and B subunits [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889355|gb|EFK84501.1| 20S proteasome A and B subunits [Thermoanaerobacter sp. X561]
gi|307581405|gb|ADN54804.1| 20S proteasome A and B subunits [Thermoanaerobacter sp. X513]
Length = 176
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 94/175 (53%), Positives = 129/175 (73%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ VRK V +AGDGQ++ G T++K A+K+RRL G +I GFAGS ADA TL
Sbjct: 2 FKGTTIIAVRKGAKVSVAGDGQITFGENTILKHGAKKIRRLYNGEVIVGFAGSVADALTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E+KLEQY L R++VELA++WR DK LR LEA+++ DK TL+I+G G+V+EP+
Sbjct: 62 SQKFEEKLEQYGGNLKRAAVELAQEWRKDKILRKLEALLIAVDKKDTLLISGTGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ IGSGG+YA++AA AL +T E+IA+KA+ IA+ ICVYTN+NI +ETL
Sbjct: 122 EDVIGIGSGGNYAMAAALALRYNTDLDTEDIAKKALEIASKICVYTNNNITVETL 176
>gi|302338072|ref|YP_003803278.1| 20S proteasome A and subunit betas [Spirochaeta smaragdinae DSM
11293]
gi|301635257|gb|ADK80684.1| 20S proteasome A and B subunits [Spirochaeta smaragdinae DSM 11293]
Length = 183
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 100/180 (55%), Positives = 135/180 (75%), Gaps = 1/180 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+ ++ MHATTIL VR++G V +AGDGQV+LGQT+MK NARKVRR+ G ++ GFAG++A
Sbjct: 3 EEKSLTMHATTILAVRREGNVAMAGDGQVTLGQTLMKGNARKVRRIYDGKVLVGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL E E KL+Q+ + RS+VELAK WR D+ LR LEAM+L+AD T TL+I+G GD
Sbjct: 63 DAFTLFEHFEGKLKQHGGDITRSAVELAKLWRTDRALRRLEAMLLVADHTKTLLISGTGD 122
Query: 127 VLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+EPEN +AIGSGG++ +A L ++ S +EIA +AM IA+ IC+YTN +LE +
Sbjct: 123 VVEPENEAIAIGSGGNFAYAAALAYLDASDLSPKEIALRAMKIASGICIYTNDQFILEEI 182
>gi|260428765|ref|ZP_05782742.1| ATP-dependent protease HslV [Citreicella sp. SE45]
gi|260419388|gb|EEX12641.1| ATP-dependent protease HslV [Citreicella sp. SE45]
Length = 185
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 118/186 (63%), Positives = 146/186 (78%), Gaps = 3/186 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D+ + H TTI+ VRK G VV+AGDGQVSLGQTV+K ARKVRRL G +++ GF
Sbjct: 1 MADQEFP-GWHGTTIIGVRKGGQVVVAGDGQVSLGQTVIKGTARKVRRLSPGGSDVVCGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAF LLERLE KLE+ P QL R+ VELAKDWR DKYL+ LEAM+++ D VI
Sbjct: 60 AGSTADAFALLERLEAKLEKTPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGRELYVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AARA+M ++ SAE+IAR+AM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARAMMDSERSAEDIARRAMAIAADICVYTNGNLT 179
Query: 182 LETLKV 187
+ET+
Sbjct: 180 VETISA 185
>gi|95928613|ref|ZP_01311360.1| 20S proteasome, A and B subunits [Desulfuromonas acetoxidans DSM
684]
gi|95135403|gb|EAT17055.1| 20S proteasome, A and B subunits [Desulfuromonas acetoxidans DSM
684]
Length = 176
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 98/175 (56%), Positives = 130/175 (74%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI+ VR+D V +AGDGQV+LG TVMK A K+RR+ IIAGFAGS+ADAFTL
Sbjct: 2 FRGTTIVCVRRDDQVTLAGDGQVTLGHTVMKHGACKIRRMHNDQIIAGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E KL+++ QL R++V LAKDWR D+ LR LEA++L+AD+ TLVI+G+GDV+E ++
Sbjct: 62 EKFEAKLQEFRGQLARAAVALAKDWRNDRVLRRLEALLLVADRDQTLVISGVGDVIESDD 121
Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
GV AIGSGG Y +A L +T E+IA +A++IAA+IC+YTN NI +ETL
Sbjct: 122 GVAAIGSGGPYAQAAARALLRNTDMVPEQIAEQALTIAAEICIYTNDNISMETLS 176
>gi|108762078|ref|YP_631221.1| ATP-dependent protease peptidase subunit [Myxococcus xanthus DK
1622]
gi|47605682|sp|Q84F94|HSLV_MYXXA RecName: Full=ATP-dependent protease subunit HslV
gi|123074376|sp|Q1D802|HSLV_MYXXD RecName: Full=ATP-dependent protease subunit HslV
gi|27804890|gb|AAO22924.1| HslV-like protein [Myxococcus xanthus]
gi|108465958|gb|ABF91143.1| heat shock protein HslVU, ATP-dependent protease HslV [Myxococcus
xanthus DK 1622]
Length = 175
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 93/174 (53%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL VR+DG V IA DGQVSL +TVMK A+KVRRLG+G ++AGFAGS+ADAFTL
Sbjct: 2 FHGTTILCVRRDGKVAIASDGQVSLEKTVMKNTAKKVRRLGEGQVLAGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KL+++ + R+ VEL KDWR D++LR LEA++++ADK T +++G GDV+EP+
Sbjct: 62 ERFEAKLKEHQKNMARACVELGKDWRTDRFLRRLEALLIVADKEKTFILSGAGDVIEPDY 121
Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ A+GSGG Y +A + TQ SA ++ ++++IA +I +YTN NI +E L
Sbjct: 122 GIAAVGSGGPYAFAAARALMAHTQMSARDVVHQSLTIAGEIDIYTNANISIEEL 175
>gi|254796565|ref|YP_003081401.1| ATP-dependent protease HslV [Neorickettsia risticii str. Illinois]
gi|254589802|gb|ACT69164.1| ATP-dependent protease HslV [Neorickettsia risticii str. Illinois]
Length = 187
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 100/181 (55%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
H TTIL++RK VV+ GDGQV++G V+K+ A+KV+RL G II+GFAGS+ADAFTL
Sbjct: 4 FHGTTILSIRKGDKVVMIGDGQVTMGNAVVVKSTAQKVKRLSNGKIISGFAGSTADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ERLE KLE +P QLLRS VELAKDWR DK+LR LEAM+++AD T ++ G GDV+EPE
Sbjct: 64 FERLESKLEAHPGQLLRSCVELAKDWRTDKFLRRLEAMMIVADARGTFILNGAGDVIEPE 123
Query: 132 NGVMAIGSGGSY--ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
+ V AIGSGG+Y A + A + ++ A +IA AM IAA ICV+TN N +E +
Sbjct: 124 DSVAAIGSGGNYALAAAKALVVHASDLDAFQIAEAAMKIAAKICVFTNENFTVEVIDCAS 183
Query: 190 E 190
+
Sbjct: 184 K 184
>gi|159139475|gb|AAK85868.2| heat shock protein hslV [Agrobacterium tumefaciens str. C58]
Length = 160
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 121/160 (75%), Positives = 144/160 (90%)
Query: 29 IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLL+RLEKKLEQYP QL+R
Sbjct: 1 MAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLDRLEKKLEQYPGQLMR 60
Query: 89 SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA 148
++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G +AIGSGG+YA +AA
Sbjct: 61 AAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGAIAIGSGGNYAFAAA 120
Query: 149 RALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
RA+M T SAEE+AR+++ IAADICVYTNHN+V+ETL
Sbjct: 121 RAMMDTDKSAEEVARQSLDIAADICVYTNHNLVVETLDAE 160
>gi|153840197|ref|ZP_01992864.1| ATP-dependent protease HslV [Vibrio parahaemolyticus AQ3810]
gi|149746139|gb|EDM57269.1| ATP-dependent protease HslV [Vibrio parahaemolyticus AQ3810]
Length = 176
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 101/170 (59%), Positives = 131/170 (77%), Gaps = 1/170 (0%)
Query: 22 RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
R++ VVIAGDGQVSLG TVMK NARKVRRL ++AGFAG +ADAFTL ERLE KL+
Sbjct: 1 RRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERLESKLQM 60
Query: 82 YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
+ L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG
Sbjct: 61 HQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGG 120
Query: 142 SYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
+YA +AA AL+ +T A EIA KA++IA DICV+TNH+ +E L E
Sbjct: 121 AYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEELDSTTE 170
>gi|154249396|ref|YP_001410221.1| ATP-dependent protease peptidase subunit [Fervidobacterium nodosum
Rt17-B1]
gi|154153332|gb|ABS60564.1| 20S proteasome A and B subunits [Fervidobacterium nodosum Rt17-B1]
Length = 188
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 91/184 (49%), Positives = 131/184 (71%), Gaps = 1/184 (0%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ D + +TT+L ++KDG VV+A DGQV+ G TVMK ARKVR++G G ++AGFA
Sbjct: 5 ALNDFNDKNMWRSTTVLAIKKDGKVVMAADGQVTYGATVMKGTARKVRKIGDGKVLAGFA 64
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G+ ADA TLLER E K ++ LL++++ELAKDWR+D+ LR LEAM+++ADK L+++
Sbjct: 65 GAVADAMTLLERFENKYREWNGNLLKAAIELAKDWRLDRALRRLEAMLIVADKDNLLLLS 124
Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
G G+V++P+ V+AIGSGG Y +A L +T A +I +AM IA++IC+YTN NI
Sbjct: 125 GTGEVIQPDEDVIAIGSGGPYALAAARALLRNTDFDARKIVEEAMKIASEICIYTNENIT 184
Query: 182 LETL 185
+E L
Sbjct: 185 IEEL 188
>gi|189346636|ref|YP_001943165.1| ATP-dependent protease peptidase subunit [Chlorobium limicola DSM
245]
gi|238692148|sp|B3ECB1|HSLV_CHLL2 RecName: Full=ATP-dependent protease subunit HslV
gi|189340783|gb|ACD90186.1| 20S proteasome A and B subunits [Chlorobium limicola DSM 245]
Length = 182
Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats.
Identities = 95/183 (51%), Positives = 132/183 (72%), Gaps = 2/183 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
MG + + + +TT+L V +DG + DGQ++LG TV+K + RK+R L G II GFAG
Sbjct: 1 MGQESKPL-IRSTTVLGVIRDGKAALGSDGQMTLGNTVLKHSTRKIRSLYHGRIITGFAG 59
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADA TLL+R E+KL+ Y +L R++VELA+DWR DKYLR LEAM+ + + L+I+G
Sbjct: 60 ATADAVTLLDRFEEKLDAYGGKLERAAVELARDWRTDKYLRRLEAMLAVVSQDKALIISG 119
Query: 124 MGDVLEPENGVMAIGSGGSYALSAAR-ALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
GDV+EPE+ ++AIGSG YAL+AAR L T SA EI +++ IAADIC+YTN +IV+
Sbjct: 120 TGDVIEPEDSIVAIGSGSMYALAAARSLLKHTPLSAREIVSESLKIAADICIYTNDHIVI 179
Query: 183 ETL 185
E L
Sbjct: 180 EEL 182
>gi|300906260|ref|ZP_07123969.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 84-1]
gi|300401941|gb|EFJ85479.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 84-1]
Length = 164
Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats.
Identities = 95/160 (59%), Positives = 124/160 (77%), Gaps = 1/160 (0%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KL+ + L+
Sbjct: 2 VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLKMHQGHLV 61
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
+++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62 KAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAA 121
Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
ARAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 ARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEELS 161
>gi|299068384|emb|CBJ39608.1| peptidase component of the HslUV protease [Ralstonia solanacearum
CMR15]
Length = 178
Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats.
Identities = 97/176 (55%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ H TTI++VR+ V + GDGQV+LG VMK ARKVR + G ++ GFAG++ADAF+L
Sbjct: 3 QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIFDGKVLVGFAGATADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E KL++Y LLR++V+LAKDWR D+ LR+LEAM+++AD TLVITG GDVL+PE
Sbjct: 63 LDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADHESTLVITGNGDVLDPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G+ AIGSGG+YA SAA+ALM +T+ + ++ K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALMENTELAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178
>gi|288550547|ref|ZP_05970868.2| hypothetical protein ENTCAN_09613 [Enterobacter cancerogenus ATCC
35316]
gi|288314762|gb|EFC53700.1| ATP-dependent protease HslVU, peptidase subunit [Enterobacter
cancerogenus ATCC 35316]
Length = 164
Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats.
Identities = 94/159 (59%), Positives = 123/159 (77%), Gaps = 1/159 (0%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L+
Sbjct: 2 VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLV 61
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
+++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62 KAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLIAIGSGGPYAQAA 121
Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
ARAL+ +T +A +IA KA+ IA DIC+YTNHN +E L
Sbjct: 122 ARALLENTDMNARDIAVKALDIAGDICIYTNHNHTIEEL 160
>gi|323700574|ref|ZP_08112486.1| 20S proteasome, A and B subunits [Desulfovibrio sp. ND132]
gi|323460506|gb|EGB16371.1| 20S proteasome, A and B subunits [Desulfovibrio desulfuricans
ND132]
Length = 179
Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats.
Identities = 104/176 (59%), Positives = 129/176 (73%), Gaps = 2/176 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTI+ V+ + +AGDGQV+LGQ V MK ARKVRR+ K + GFAG++ADAF
Sbjct: 1 MELRGTTIVAVKDENGTAVAGDGQVTLGQAVAMKHTARKVRRIYKDRVSIGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER E KLE Y LLR++VELAKDWR DKYLR LEAM+L AD L+I+G GDV+E
Sbjct: 61 TLSERFESKLETYAGNLLRAAVELAKDWRTDKYLRKLEAMLLAADGEHILIISGTGDVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
P++GV AIGSGGSY +A +T AE IARKAM IAADICVYTN++I +ET
Sbjct: 121 PDDGVAAIGSGGSYALAAARALQQNTDLPAETIARKAMEIAADICVYTNNHITIET 176
>gi|300921946|ref|ZP_07138095.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 182-1]
gi|301328292|ref|ZP_07221408.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 78-1]
gi|300421670|gb|EFK04981.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 182-1]
gi|300845254|gb|EFK73014.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
MS 78-1]
Length = 164
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 95/160 (59%), Positives = 123/160 (76%), Gaps = 1/160 (0%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L+
Sbjct: 2 VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLV 61
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
+++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62 KAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAA 121
Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
RAL+ +T+ SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 VRALLENTELSAREIAEKALDIAGDICIYTNHFHTIEELS 161
>gi|488725|emb|CAA83919.1| heat shock protein [Bacillus subtilis]
Length = 177
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 94/176 (53%), Positives = 127/176 (72%), Gaps = 4/176 (2%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
ATTI V+ G ++GDGQV+ GQ VMK ARKVR+L G ++AGFAGS AD FTL E
Sbjct: 2 ATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADRFTLFE 61
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
+ E KL++Y L R++VELAK+WR DK LR LEAM+++ ++ L+++G G+V+EP++G
Sbjct: 62 KFEAKLKEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPDDG 121
Query: 134 VMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
++AIGSGG+YAL+A RAL SA EIAR A+ A +ICVYTN I+LE L+
Sbjct: 122 ILAIGSGGNYALAAGRALKKHAGESMSASEIARAALETAGEICVYTNDQIILEELE 177
>gi|293393522|ref|ZP_06637832.1| ATP-dependent protease HslVU [Serratia odorifera DSM 4582]
gi|291423857|gb|EFE97076.1| ATP-dependent protease HslVU [Serratia odorifera DSM 4582]
Length = 164
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 91/159 (57%), Positives = 120/159 (75%), Gaps = 1/159 (0%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
VI GDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L+
Sbjct: 2 VIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLV 61
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
+++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSGG YA SA
Sbjct: 62 KAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQSA 121
Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
ARAL+ +T A +I K++ IA DIC+YTNH + +E L
Sbjct: 122 ARALLENTDLGARDIVEKSLGIAGDICIYTNHFLTIEEL 160
>gi|157084475|gb|ABV14153.1| hypothetical protein CKO_03062 [Citrobacter koseri ATCC BAA-895]
Length = 164
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 95/159 (59%), Positives = 123/159 (77%), Gaps = 1/159 (0%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L+
Sbjct: 2 VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLV 61
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
+++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62 KAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVIQPENDLIAIGSGGPYAQAA 121
Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
ARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 ARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 160
>gi|114762243|ref|ZP_01441711.1| ATP-dependent protease peptidase subunit [Pelagibaca bermudensis
HTCC2601]
gi|114545267|gb|EAU48270.1| ATP-dependent protease peptidase subunit [Roseovarius sp. HTCC2601]
Length = 185
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 117/186 (62%), Positives = 146/186 (78%), Gaps = 3/186 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D+ + H TTI+ VRK G VV+AGDGQVSLGQTV+K +ARKVRRL G +++ GF
Sbjct: 1 MADQEFP-GWHGTTIIGVRKGGQVVVAGDGQVSLGQTVIKGSARKVRRLSPGGSDVVCGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAF LLERLE KLE+ P QL R+ VELAKDWR DKYL+ LEAM+++ D VI
Sbjct: 60 AGSTADAFALLERLEAKLEKTPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGRELYVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ + AIGSGG++AL+AAR +M ++ SAEEIAR+AM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDIAAIGSGGNFALAAARGMMDSERSAEEIARRAMAIAADICVYTNGNLT 179
Query: 182 LETLKV 187
+ET+
Sbjct: 180 VETISA 185
>gi|307718593|ref|YP_003874125.1| ATP-dependent protease HslV [Spirochaeta thermophila DSM 6192]
gi|306532318|gb|ADN01852.1| ATP-dependent protease HslV [Spirochaeta thermophila DSM 6192]
Length = 178
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 94/176 (53%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT++ VR++GVV +AGDGQV++G T+MK NARKVR L G ++ GFAG++ADAFTL
Sbjct: 3 EVKSTTVIAVRRNGVVAMAGDGQVTMGTTIMKGNARKVRTLYDGRVLVGFAGATADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KL+++ +LRS+V LAKDWR D+ LR LEA++L+AD+ L+++G GDV+EPE
Sbjct: 63 FERFEGKLKEFSGDVLRSAVALAKDWRTDRMLRRLEALLLVADRERMLLLSGTGDVVEPE 122
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+GV+AIGSGG Y +A L T SA IA +++ IAA IC+YTN I++E L
Sbjct: 123 DGVLAIGSGGPYAHAAAKALLAHTDLSARRIAEESLRIAASICIYTNEQIIVEELS 178
>gi|239618026|ref|YP_002941348.1| 20S proteasome A and B subunits [Kosmotoga olearia TBF 19.5.1]
gi|239506857|gb|ACR80344.1| 20S proteasome A and B subunits [Kosmotoga olearia TBF 19.5.1]
Length = 181
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 97/177 (54%), Positives = 133/177 (75%), Gaps = 1/177 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+MH TTIL VR++G VIAGDGQ++LG TVMK +ARKVR+LG G ++AGFAGS ADA TL
Sbjct: 3 QMHGTTILAVRRNGKTVIAGDGQITLGATVMKGSARKVRKLGDGKVLAGFAGSVADALTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+K + + LLR++V LAK+WR +K LRNLEA++L+AD L+I+G G+V++P+
Sbjct: 63 FEKFEEKYRESNSSLLRAAVNLAKEWRTNKILRNLEALLLVADTDNILLISGNGEVIQPD 122
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
V+AIGSGG Y +A L +T AE IA++AM IA++IC+YTN N +E L+V
Sbjct: 123 ENVIAIGSGGPYALAAAQALLRNTDMDAEGIAKQAMKIASEICIYTNSNFTVEALEV 179
>gi|255020690|ref|ZP_05292752.1| ATP-dependent protease HslV [Acidithiobacillus caldus ATCC 51756]
gi|254969926|gb|EET27426.1| ATP-dependent protease HslV [Acidithiobacillus caldus ATCC 51756]
Length = 180
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 105/177 (59%), Positives = 140/177 (79%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ +H TTIL+VR+ VV+AGDGQV+ G TVMKANARKVRRL + +++ GFAG++ADAFT
Sbjct: 5 LDLHGTTILSVRRGQNVVMAGDGQVTFGNTVMKANARKVRRL-EADVLVGFAGATADAFT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LLER E KL+ +P QL +++VELAK+WR D+ LR LEAM+ +AD+ +L++TG GDVLEP
Sbjct: 64 LLERFEAKLKAHPGQLAKAAVELAKEWRTDRVLRRLEAMLAVADRQQSLILTGQGDVLEP 123
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
E G++AIGSGG YAL+AARAL+ ++ SA IA +A+ IAADIC+YTN +E L
Sbjct: 124 EYGIIAIGSGGPYALAAARALLEHSELSARAIAERALVIAADICIYTNQQHSVEELS 180
>gi|77920005|ref|YP_357820.1| ATP-dependent protease peptidase subunit [Pelobacter carbinolicus
DSM 2380]
gi|123573598|sp|Q3A1V7|HSLV_PELCD RecName: Full=ATP-dependent protease subunit HslV
gi|77546088|gb|ABA89650.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Pelobacter carbinolicus DSM 2380]
Length = 177
Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 96/176 (54%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ + TTI+ VR G V +AGDGQV+LG TVMK ARK+RR+ +G I+AGFAGS+ADAFT
Sbjct: 1 MDIRGTTIICVRHQGQVTMAGDGQVTLGNTVMKHGARKIRRMYEGRILAGFAGSTADAFT 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E K++++ L +++V LAKDWR D+ LR LEA++++AD TLV++G GDV+EP
Sbjct: 61 LFEKFEAKVQEFHGNLPKAAVALAKDWRTDQILRKLEALLIVADTNTTLVLSGAGDVIEP 120
Query: 131 ENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G+ AIGSGGSYAL+AARAL +E+IA +A+ IA +IC+YTN +I E+L
Sbjct: 121 DDGIAAIGSGGSYALAAARALTRHAGLPSEQIATEALRIAGEICIYTNDHISSESL 176
>gi|56417065|ref|YP_154139.1| ATP-dependent protease peptidase subunit [Anaplasma marginale str.
St. Maries]
gi|254995240|ref|ZP_05277430.1| ATP-dependent protease peptidase subunit [Anaplasma marginale str.
Mississippi]
gi|255003418|ref|ZP_05278382.1| ATP-dependent protease peptidase subunit [Anaplasma marginale str.
Puerto Rico]
gi|255004538|ref|ZP_05279339.1| ATP-dependent protease peptidase subunit [Anaplasma marginale str.
Virginia]
gi|81599106|sp|Q5P9Z6|HSLV_ANAMM RecName: Full=ATP-dependent protease subunit HslV
gi|56388297|gb|AAV86884.1| heat shock protein [Anaplasma marginale str. St. Maries]
Length = 189
Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 106/185 (57%), Positives = 147/185 (79%), Gaps = 6/185 (3%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ M+ TTIL +R+ G V+IAGDGQVS+G +MK +A+K++RL ++I GFAG++AD
Sbjct: 4 RDSYTMYGTTILCIRQGGSVIIAGDGQVSMGSAIMKTSAKKIKRLAGDSVITGFAGATAD 63
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
AFTL ERLE KLE++P QL+R+ VELAKDWR DKYLR LEAM+++ADK+++L+I+G GDV
Sbjct: 64 AFTLFERLEAKLEKHPGQLMRACVELAKDWRRDKYLRRLEAMMIVADKSVSLIISGGGDV 123
Query: 128 LEPENGVMAIGSGGSYALSAARALMST------QNSAEEIARKAMSIAADICVYTNHNIV 181
LEPENG+ AIGSGG++ALSAARAL + + E IA AM++A++ICVYTN+NI+
Sbjct: 124 LEPENGIAAIGSGGNFALSAARALCAARDELSLDMTLEYIATAAMAVASEICVYTNNNII 183
Query: 182 LETLK 186
+E ++
Sbjct: 184 MEKIE 188
>gi|156103401|ref|XP_001617393.1| heat shock protein hslv [Plasmodium vivax SaI-1]
gi|148806267|gb|EDL47666.1| heat shock protein hslv, putative [Plasmodium vivax]
Length = 207
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 101/173 (58%), Positives = 134/173 (77%), Gaps = 2/173 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL VRK+ V + GDG VS G ++K NA+K+RRL K NI+ GFAG++AD FTLL+
Sbjct: 36 HGTTILCVRKNNEVCLIGDGMVSQGTMIVKGNAKKIRRL-KDNILMGFAGATADCFTLLD 94
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
+ E K+++YPNQLLRS VELAK WR D+YLR+LEA++++ADK + L +TG GDVLEP
Sbjct: 95 KFETKIDEYPNQLLRSCVELAKLWRTDRYLRHLEAVLIVADKDVLLEVTGNGDVLEPSGN 154
Query: 134 VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ GSGG YA++AARAL + SA++IA KAM+IAAD+C +TN+N + ETL
Sbjct: 155 VLGTGSGGPYAIAAARALYDVENLSAKDIAYKAMNIAADMCCHTNNNFICETL 207
>gi|269958526|ref|YP_003328313.1| ATP-dependent protease peptidase subunit [Anaplasma centrale str.
Israel]
gi|269848355|gb|ACZ48999.1| ATP-dependent protease peptidase subunit [Anaplasma centrale str.
Israel]
Length = 189
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 108/179 (60%), Positives = 144/179 (80%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M+ TTIL +R+ VVIAGDGQVS+G +MK +ARK++RL +I GFAG++ADAFTL
Sbjct: 9 MYGTTILCIRRGDSVVIAGDGQVSMGSAIMKTSARKIKRLAGDTVITGFAGATADAFTLF 68
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++P QL+R+ VELAKDWR DKYLR LEAM+++ADK+++L+I+G GDVLEPEN
Sbjct: 69 ERLEAKLEKHPGQLMRACVELAKDWRRDKYLRRLEAMMIVADKSVSLIISGGGDVLEPEN 128
Query: 133 GVMAIGSGGSYALSAARAL------MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ AIGSGG++ALSAARAL +S + E IA AM++A++ICVYTN+NI++E +
Sbjct: 129 GIAAIGSGGNFALSAARALCTARDELSLDMTLEYIATAAMAVASEICVYTNNNIIMEKI 187
>gi|297569002|ref|YP_003690346.1| 20S proteasome A and B subunits [Desulfurivibrio alkaliphilus AHT2]
gi|296924917|gb|ADH85727.1| 20S proteasome A and B subunits [Desulfurivibrio alkaliphilus AHT2]
Length = 176
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 89/176 (50%), Positives = 128/176 (72%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+++ +TT++ VR +V +AGDGQV+LG V+K ARK+RRL G +I GFAG++ADAFT
Sbjct: 1 MQVRSTTVVAVRHREMVAMAGDGQVTLGNVVVKHQARKIRRLYHGRVITGFAGATADAFT 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ++LE++LEQY LLR++VELAK+WR D+ LR LEAM++ D +L+++G GDV+EP
Sbjct: 61 LFDKLEQQLEQYSGNLLRAAVELAKEWRTDRMLRRLEAMMVAVDAERSLLLSGNGDVIEP 120
Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG Y +A + + A EI R AM IA +C+YTN +I LE L
Sbjct: 121 DDGILAIGSGGPYAHAAAKALVAHSGLDAPEICRAAMEIAGGLCIYTNDSIHLEVL 176
>gi|283853297|ref|ZP_06370547.1| 20S proteasome A and B subunits [Desulfovibrio sp. FW1012B]
gi|283571337|gb|EFC19347.1| 20S proteasome A and B subunits [Desulfovibrio sp. FW1012B]
Length = 184
Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats.
Identities = 100/182 (54%), Positives = 134/182 (73%), Gaps = 2/182 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTIL V+ D V +AGDGQV+LGQ+V MK ARKVRR+ K ++ GFAG++ADAF
Sbjct: 1 MELRGTTILAVKTDTGVAMAGDGQVTLGQSVAMKHGARKVRRIYKDKVVIGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER E KLE++ L+R+SVELAKDWR DKYLR LEAM+L+AD L+++G GDV+E
Sbjct: 61 TLFERFEAKLEEFGGNLVRASVELAKDWRKDKYLRRLEAMLLVADAGNILLLSGNGDVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
P++GV AIGSGG Y +A + T S EI +AM+IAA+ICV+TN IV+ET++
Sbjct: 121 PDDGVAAIGSGGPYALAAARALVRHTGLSGREIVERAMAIAAEICVFTNDRIVVETVERP 180
Query: 189 DE 190
+
Sbjct: 181 AD 182
>gi|194336303|ref|YP_002018097.1| 20S proteasome A and B subunits [Pelodictyon phaeoclathratiforme
BU-1]
gi|238693421|sp|B4SGR7|HSLV_PELPB RecName: Full=ATP-dependent protease subunit HslV
gi|194308780|gb|ACF43480.1| 20S proteasome A and B subunits [Pelodictyon phaeoclathratiforme
BU-1]
Length = 182
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 94/183 (51%), Positives = 135/183 (73%), Gaps = 2/183 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + V + +TT++ V +DG + DGQ++LG TV+K + RK+RRL G ++AGFAG
Sbjct: 1 MKNNQRPV-IRSTTVIGVIRDGKAALGSDGQMTLGNTVIKHSTRKIRRLYHGKLVAGFAG 59
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADA TLL+R E+KLE Y +L R++VELA+DWR DKYLR LEAM+ I L+I+G
Sbjct: 60 ATADAVTLLDRFEEKLEAYNGKLDRAAVELARDWRTDKYLRRLEAMLAIVSHDKALIISG 119
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVL 182
GDV+EPE+G++AIGSG YAL+AAR+LM + A+EI +++ IAADIC+YTN +I++
Sbjct: 120 TGDVIEPEDGIVAIGSGSMYALAAARSLMKHSSLPAKEIVLESLKIAADICIYTNDHIIV 179
Query: 183 ETL 185
E +
Sbjct: 180 EEV 182
>gi|332524480|ref|ZP_08400689.1| ATP-dependent protease subunit HslV [Rubrivivax benzoatilyticus
JA2]
gi|332107798|gb|EGJ09022.1| ATP-dependent protease subunit HslV [Rubrivivax benzoatilyticus
JA2]
Length = 179
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 89/174 (51%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL+VR+ +V + GDGQV+LG V+K++ARKVR+L + ++AGFAG++ADAFTL
Sbjct: 4 FHGTTILSVRRGPLVALGGDGQVTLGTIVVKSSARKVRKLYRDQVLAGFAGATADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KLE++ L R+++EL KDWR D+ LR LEAM+ +AD T +L+ITG GDVLEPE+
Sbjct: 64 ERFEAKLEKHQGHLQRAAIELTKDWRTDRVLRRLEAMLAVADATSSLIITGNGDVLEPEH 123
Query: 133 GVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGG +A L T+ + ++I ++++ IA D+C+YTN + +E L
Sbjct: 124 GIVAIGSGGAYAQAAARALLQHTELAPQDIVKRSLEIAGDLCIYTNQSHTIEVL 177
>gi|291085930|ref|ZP_06354447.2| hypothetical protein CIT292_08924 [Citrobacter youngae ATCC 29220]
gi|291069632|gb|EFE07741.1| ATP-dependent protease HslVU, peptidase subunit [Citrobacter
youngae ATCC 29220]
Length = 164
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 94/159 (59%), Positives = 122/159 (76%), Gaps = 1/159 (0%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L+
Sbjct: 2 VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLV 61
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
+++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62 KAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQAA 121
Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
ARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 ARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 160
>gi|83950790|ref|ZP_00959523.1| ATP-dependent protease peptidase subunit [Roseovarius nubinhibens
ISM]
gi|83838689|gb|EAP77985.1| ATP-dependent protease peptidase subunit [Roseovarius nubinhibens
ISM]
Length = 185
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 120/185 (64%), Positives = 146/185 (78%), Gaps = 3/185 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M + + H TTI+ VRK G VVIAGDGQVSLGQTV+K +ARKVRRL G +++AGF
Sbjct: 1 MQREEFP-GWHGTTIIGVRKGGEVVIAGDGQVSLGQTVIKGSARKVRRLSPGGFDVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM+++ D VI
Sbjct: 60 AGSTADAFTLLERLEAKLEASPGQLQRASVELAKDWRTDKYLQKLEAMLIVTDGQDLYVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AARA+M + SAEE+AR AM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNFALAAARAMMDSDKSAEEVARAAMAIAADICVYTNGNLT 179
Query: 182 LETLK 186
+E++
Sbjct: 180 VESIS 184
>gi|268317429|ref|YP_003291148.1| 20S proteasome A and B subunits [Rhodothermus marinus DSM 4252]
gi|262334963|gb|ACY48760.1| 20S proteasome A and B subunits [Rhodothermus marinus DSM 4252]
Length = 183
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 92/176 (52%), Positives = 126/176 (71%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT+L VR +G V + DGQ +LG TVMK A+KVR L G I+AGFAG++ADA TL
Sbjct: 6 IHGTTVLGVRHNGRVALGADGQATLGNTVMKRRAQKVRALYNGKILAGFAGATADALTLF 65
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E KL+Q+ +LR++VELAKDWR D+YLR L+A++ +A L+I+G GD++EP++
Sbjct: 66 ERFEGKLQQHGGNVLRAAVELAKDWRTDRYLRRLDALLAVASPDRLLLISGNGDLIEPDD 125
Query: 133 GVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
++AIGSGG +AL+AARAL SA I +A+SIAADIC+YTNH + +
Sbjct: 126 DIVAIGSGGPFALAAARALRKHRPDLSARAIVEEALSIAADICIYTNHEFTILEID 181
>gi|310778331|ref|YP_003966664.1| ATP dependent peptidase CodWX, CodW component [Ilyobacter
polytropus DSM 2926]
gi|309747654|gb|ADO82316.1| ATP dependent peptidase CodWX, CodW component [Ilyobacter
polytropus DSM 2926]
Length = 177
Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats.
Identities = 93/175 (53%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K ATTI+ V+KD V IAGDGQV+ G TV K+ A+K+R++ I+ GFAGS+ADAF L
Sbjct: 3 KFRATTIIAVKKDNKVAIAGDGQVTFGDTVFKSGAKKIRKMYDNTILMGFAGSAADAFAL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E KL+++ L ++SVELAK+WR DK LR LEAM+++ADK+ L+++G GDV+EP+
Sbjct: 63 FDKFEGKLDEFGGNLKKASVELAKEWRHDKALRVLEAMLVVADKSNVLIVSGNGDVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGGSYA +AA+AL M + A ++A +A+ IA ++C+YTN NI +ETL
Sbjct: 123 DGIAAIGSGGSYAYAAAKALVMHSDLGAPQVAEEALKIAGNMCIYTNLNISVETL 177
>gi|299133209|ref|ZP_07026404.1| 20S proteasome A and B subunits [Afipia sp. 1NLS2]
gi|298593346|gb|EFI53546.1| 20S proteasome A and B subunits [Afipia sp. 1NLS2]
Length = 192
Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats.
Identities = 121/182 (66%), Positives = 150/182 (82%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
A H TTILTVRK G VV+ GDGQVS+GQTV+K+NA+KVRRLGKG++I GFAG
Sbjct: 9 HMQNSQAESWHGTTILTVRKGGKVVVGGDGQVSIGQTVIKSNAKKVRRLGKGDVIGGFAG 68
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTL ERLE KLEQYP QL R+ VELAKDWR D+YLR LEAM+++ADK ++LV+TG
Sbjct: 69 ATADAFTLFERLESKLEQYPGQLTRACVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTG 128
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE+G++AIGSGG+YAL+AARAL + + AE I R+++ IAADICVYTN N+ +E
Sbjct: 129 TGDVLEPEDGIIAIGSGGNYALAAARALSDSSHDAEAIVRRSLEIAADICVYTNRNLTIE 188
Query: 184 TL 185
TL
Sbjct: 189 TL 190
>gi|94500582|ref|ZP_01307113.1| ATP-dependent protease peptidase subunit [Oceanobacter sp. RED65]
gi|94427372|gb|EAT12351.1| ATP-dependent protease peptidase subunit [Oceanobacter sp. RED65]
Length = 175
Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats.
Identities = 101/173 (58%), Positives = 137/173 (79%), Gaps = 1/173 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR++ VV+ GDGQVSLG TVMK NARKVR L G +IAGFAG++ADAFTL E+
Sbjct: 2 TTILSVRREDEVVMGGDGQVSLGNTVMKGNARKVRTLYDGKVIAGFAGATADAFTLFEKF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E L+++ L R++VE+AK+WR D+ LR LEA++ +ADK +L+ITG GDVLEPE+ ++
Sbjct: 62 EGHLQKHGGHLTRAAVEMAKEWRSDRALRKLEAILAVADKDASLIITGNGDVLEPEDSLI 121
Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
A+GSGG+YAL+AA+AL T A +I K ++IAADICV+TNHN+ +E+LK+
Sbjct: 122 AVGSGGNYALAAAKALYHETDMGARDIVEKGLTIAADICVFTNHNLTIESLKI 174
>gi|52424326|ref|YP_087463.1| ATP-dependent protease peptidase subunit [Mannheimia
succiniciproducens MBEL55E]
gi|85542205|sp|Q65VY2|HSLV_MANSM RecName: Full=ATP-dependent protease subunit HslV
gi|52306378|gb|AAU36878.1| HslV protein [Mannheimia succiniciproducens MBEL55E]
Length = 173
Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats.
Identities = 92/172 (53%), Positives = 128/172 (74%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRK+G V I GDGQ +LG V K RKVRRL K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKNGKVAIGGDGQATLGNCVEKGTVRKVRRLYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++++VELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLVKAAVELAKEWRTERSLRRLEAMMIVANESEFLLVSGSGDVIEPEFDVL 121
Query: 136 AIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ T + SA EI ++A+ IA DI +YTNHN V+E +
Sbjct: 122 AIGSGGNFAKSAALALLRTNNELSAAEIVKQALIIAGDIDIYTNHNHVIEEV 173
>gi|56698691|ref|YP_169068.1| ATP-dependent protease peptidase subunit [Ruegeria pomeroyi DSS-3]
gi|81558231|sp|Q5LLP2|HSLV_SILPO RecName: Full=ATP-dependent protease subunit HslV
gi|56680428|gb|AAV97094.1| ATP-dependent protease hslV [Ruegeria pomeroyi DSS-3]
Length = 185
Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats.
Identities = 120/184 (65%), Positives = 145/184 (78%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
M D + H TTI+ V+K G VVIAGDGQVSLGQTV+K ARKVRRL G +++AGF
Sbjct: 1 MADDQFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGYHVVAGF 59
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
AGS+ADAFTLLERLE KLE P QL R+SVELAKDWR DKYL+ LEAM++++D VI
Sbjct: 60 AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGQDMFVI 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
TG GDVLEPE+ V AIGSGG++AL+AARA+M + SAEE+AR AM+IAADICVYTN N+
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARAMMDSDKSAEEVARAAMAIAADICVYTNGNLT 179
Query: 182 LETL 185
+E +
Sbjct: 180 VEKI 183
>gi|258597527|ref|XP_001350699.2| Heat shock protein hslv [Plasmodium falciparum 3D7]
gi|254945393|gb|AAN36379.2| Heat shock protein hslv [Plasmodium falciparum 3D7]
Length = 207
Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats.
Identities = 102/181 (56%), Positives = 136/181 (75%), Gaps = 2/181 (1%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
+ + H TTIL VRK+ V + GDG VS G ++K NA+K+RRL K NI+ GFAG++
Sbjct: 28 NSKLIIPRHGTTILCVRKNNEVCLIGDGMVSQGTMIVKGNAKKIRRL-KDNILMGFAGAT 86
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
AD FTLL++ E K+++YPNQLLRS VELAK WR D+YLR+LEA++++ADK I L +TG G
Sbjct: 87 ADCFTLLDKFETKIDEYPNQLLRSCVELAKLWRTDRYLRHLEAVLIVADKDILLEVTGNG 146
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLET 184
DVLEP V+ GSGG YA++AARAL + SA++IA KAM+IAAD+C +TN+N + ET
Sbjct: 147 DVLEPSGNVLGTGSGGPYAMAAARALYDVENLSAKDIAYKAMNIAADMCCHTNNNFICET 206
Query: 185 L 185
L
Sbjct: 207 L 207
>gi|152978033|ref|YP_001343662.1| ATP-dependent protease peptidase subunit [Actinobacillus
succinogenes 130Z]
gi|171472944|sp|A6VL80|HSLV_ACTSZ RecName: Full=ATP-dependent protease subunit HslV
gi|150839756|gb|ABR73727.1| 20S proteasome A and B subunits [Actinobacillus succinogenes 130Z]
Length = 173
Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats.
Identities = 97/172 (56%), Positives = 131/172 (76%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG +V K RKVRR KG ++ GFAGS+ADAF LLE
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNSVEKGTVRKVRRTYKGKVVTGFAGSTADAFILLELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++AD+T L+I+G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLVKSAVELAKEWRTERSLRRLEAMMIVADETDFLLISGSGDVIEPEFDVL 121
Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA SAA AL+ T+ +A EI ++A+++A DI +YTNHN ++E +
Sbjct: 122 AIGSGGNYAKSAALALLRTENNLTAVEIVKEALTVAGDIDIYTNHNHIIEEI 173
>gi|255961281|ref|YP_346130.3| ATP-dependent protease peptidase subunit [Pseudomonas fluorescens
Pf0-1]
gi|77380628|gb|ABA72141.1| ATP-dependent protease hslV [Pseudomonas fluorescens Pf0-1]
Length = 192
Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats.
Identities = 93/175 (53%), Positives = 126/175 (72%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 18 TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 77
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 78 EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 137
Query: 136 AI-GSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+ G +A+ L T SA EI A+ IA DICV+TNH +E + +
Sbjct: 138 AMGSGGAYAQAAASALLKKTDLSAREIVETALGIAGDICVFTNHTQTIEEQDLAE 192
>gi|289548229|ref|YP_003473217.1| 20S proteasome A and subunit betas [Thermocrinis albus DSM 14484]
gi|289181846|gb|ADC89090.1| 20S proteasome A and B subunits [Thermocrinis albus DSM 14484]
Length = 172
Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats.
Identities = 88/171 (51%), Positives = 126/171 (73%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TT+L VR++G V+ GDGQV+LG +V+K ARK+RRL +++ GFAGS+AD L+ERL
Sbjct: 2 TTVLVVRRNGRTVMGGDGQVTLGSSVVKHGARKIRRLYHDSVLVGFAGSAADGLALMERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE++ L+R+ VELAK+WR D+YLR LEA +L+AD+ +++G GD+LEP+ +M
Sbjct: 62 ESKLEEFRGSLVRACVELAKEWRTDRYLRRLEAFLLVADREHIFLLSGGGDLLEPDEPIM 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG A ++A AL T SAEEI +++ IA+ +C+YTN V+E+L
Sbjct: 122 AIGSGGDVARASAMALYRHTSLSAEEIVLESLKIASQVCIYTNDRFVIESL 172
>gi|307942726|ref|ZP_07658071.1| ATP-dependent protease HslVU, peptidase subunit [Roseibium sp.
TrichSKD4]
gi|307773522|gb|EFO32738.1| ATP-dependent protease HslVU, peptidase subunit [Roseibium sp.
TrichSKD4]
Length = 186
Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats.
Identities = 124/186 (66%), Positives = 145/186 (77%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + H TTI+ VRK G VVIAGDGQVSLG TV+K ARKVR L KG +IAGFAG
Sbjct: 1 MSESRSQDIWHGTTIVMVRKGGEVVIAGDGQVSLGPTVIKHTARKVRPLAKGKVIAGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTL ERLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+ADK +L +TG
Sbjct: 61 ATADAFTLFERLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKNTSLALTG 120
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
GDVLEPE GVM IGSGG+YAL+AA+AL T AE IARKAM++AADICVYTN ++ +E
Sbjct: 121 TGDVLEPEGGVMGIGSGGNYALAAAKALADTDADAETIARKAMAVAADICVYTNDSVTVE 180
Query: 184 TLKVGD 189
LK D
Sbjct: 181 KLKAAD 186
>gi|146337378|ref|YP_001202426.1| ATP-dependent protease peptidase subunit [Bradyrhizobium sp.
ORS278]
gi|166221627|sp|A4YJV0|HSLV_BRASO RecName: Full=ATP-dependent protease subunit HslV
gi|146190184|emb|CAL74176.1| ATP-dependent protease hslV (protease subunit of a proteasome-like
degradation complex) [Bradyrhizobium sp. ORS278]
Length = 186
Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats.
Identities = 124/186 (66%), Positives = 149/186 (80%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ H TTILTVRK G VV+ GDGQVS+GQTV+K+NARKVR+LGKG++I GFA
Sbjct: 1 MHALSQEPTVWHGTTILTVRKGGRVVVGGDGQVSIGQTVIKSNARKVRKLGKGDVIGGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+T
Sbjct: 61 GATADAFTLFERLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKEVSLVLT 120
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
G GDVLEPE GVMAIGSGG+YAL+AARAL+ T AE I RK++ IAADICVYTN NI +
Sbjct: 121 GTGDVLEPEAGVMAIGSGGNYALAAARALIDTDKDAESIVRKSLDIAADICVYTNRNITI 180
Query: 183 ETLKVG 188
E L
Sbjct: 181 EALSAE 186
>gi|160866756|gb|ABX23379.1| hypothetical protein SARI_03564 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 164
Score = 266 bits (682), Expect = 7e-70, Method: Composition-based stats.
Identities = 95/159 (59%), Positives = 123/159 (77%), Gaps = 1/159 (0%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
VIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L+
Sbjct: 2 VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLV 61
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
+++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62 KAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAA 121
Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
ARAL+ +T+ A EIA KA+ IA DIC+YTNH +E L
Sbjct: 122 ARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 160
>gi|328957572|ref|YP_004374958.1| ATP-dependent protease subunit HslV [Carnobacterium sp. 17-4]
gi|328673896|gb|AEB29942.1| ATP-dependent protease subunit HslV [Carnobacterium sp. 17-4]
Length = 179
Score = 266 bits (682), Expect = 7e-70, Method: Composition-based stats.
Identities = 85/178 (47%), Positives = 133/178 (74%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+ HATTI ++ +G +AGDGQV++G+ V MK ARKVRR+ ++ GFAGS ADAF
Sbjct: 2 TEFHATTIFAIQHNGKCAMAGDGQVTMGEQVIMKGTARKVRRIYNDEVLVGFAGSVADAF 61
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R++VELA++WR D+ ++ LEA++++ +K L+++G G+V++
Sbjct: 62 TLEEKFEAKLHEYKGNLTRAAVELAQEWRSDRAMQKLEALLIVMNKEEMLMVSGGGEVIQ 121
Query: 130 PENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGG++AL+A RAL +A +IA+++++ AADICV+TNHNI++E L
Sbjct: 122 PDDGILAIGSGGNFALAAGRALKKLGKDLTAAQIAQESLTTAADICVFTNHNIIVEEL 179
>gi|73662824|ref|YP_301605.1| ATP-dependent protease peptidase subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|123642437|sp|Q49X38|HSLV_STAS1 RecName: Full=ATP-dependent protease subunit HslV
gi|72495339|dbj|BAE18660.1| proteasome protease subunit [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 180
Score = 266 bits (682), Expect = 7e-70, Method: Composition-based stats.
Identities = 95/179 (53%), Positives = 133/179 (74%), Gaps = 3/179 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADA 68
+ +HATTI V+ +G +AGDGQV+LG+ V MK ARKVRRL ++AGFAGS ADA
Sbjct: 2 STSIHATTIFAVQHNGHAAMAGDGQVTLGEQVIMKQTARKVRRLYNDKVLAGFAGSVADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL E+ E KL+Q+ L R++VELA++WR DK LR LEAM+++ D+T LV++G G+V+
Sbjct: 62 FTLFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDETSILVVSGTGEVI 121
Query: 129 EPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ ++AIGSGG+YALSA RAL T SA E+A +++ +A+DICV+TN I++E L
Sbjct: 122 VPDDNLIAIGSGGNYALSAGRALKRNATHLSASEMAYESLKVASDICVFTNDRIIVENL 180
>gi|297584029|ref|YP_003699809.1| 20S proteasome subunit AB [Bacillus selenitireducens MLS10]
gi|297142486|gb|ADH99243.1| 20S proteasome A and B subunits [Bacillus selenitireducens MLS10]
Length = 181
Score = 266 bits (682), Expect = 8e-70, Method: Composition-based stats.
Identities = 91/178 (51%), Positives = 128/178 (71%), Gaps = 3/178 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
++ TTI +R +G I GDGQV++GQ VMK +A KVRRL +G +I GFAGS ADAF+
Sbjct: 3 EIRGTTIFAIRHNGQAAICGDGQVTVGQAVVMKQSAVKVRRLYRGRVITGFAGSVADAFS 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KLE+Y L R++VELAK+WR D+ LR LEAM+++ DK VI G G+V+EP
Sbjct: 63 LYEKFEGKLEEYNGHLQRAAVELAKEWRGDRVLRKLEAMLIVMDKDSLYVIAGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
++G+ AIGSGG+YAL+A RA+ +AEEIA++++ AA +CVYTN ++ E ++
Sbjct: 123 DDGITAIGSGGNYALAAGRAMKKHAPHLTAEEIAKESLLTAASMCVYTNDHLTTEVIE 180
>gi|332528829|ref|ZP_08404803.1| ATP-dependent protease subunit HslV [Hylemonella gracilis ATCC
19624]
gi|332041688|gb|EGI78040.1| ATP-dependent protease subunit HslV [Hylemonella gracilis ATCC
19624]
Length = 168
Score = 266 bits (681), Expect = 9e-70, Method: Composition-based stats.
Identities = 91/165 (55%), Positives = 125/165 (75%), Gaps = 1/165 (0%)
Query: 26 VVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQ 85
V I GDGQV+LG V+K ARKVR+L G ++AGFAG++ADAFTL ER E KL+++
Sbjct: 2 QVAIGGDGQVTLGHIVVKGTARKVRKLHHGKVLAGFAGATADAFTLFERFEAKLDKHQGH 61
Query: 86 LLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYAL 145
L R+++EL +DWR D+ LR LEAM+ +AD +L+I+G GDVLEPE+GV+AIGSGG+YA
Sbjct: 62 LQRAAIELTRDWRTDRVLRRLEAMLAVADLESSLIISGNGDVLEPEHGVVAIGSGGAYAQ 121
Query: 146 SAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
SAA AL+ TQ A+EI ++++ IA +IC+YTN N +E L+ G+
Sbjct: 122 SAAIALLKHTQLDAKEIVKQSLEIAGEICIYTNMNHTIEVLEAGE 166
>gi|27904994|ref|NP_778120.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
Bp (Baizongia pistaciae)]
gi|29839275|sp|P59581|HSLV_BUCBP RecName: Full=ATP-dependent protease subunit HslV
gi|27904392|gb|AAO27225.1| ATP-dependent protease HslV [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 176
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 95/174 (54%), Positives = 128/174 (73%), Gaps = 1/174 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR + VVI GDGQ +LG T++K+N +KVR L +IAGFAG +ADAFTL E
Sbjct: 2 TTILSVRLNKQVVIGGDGQATLGNTIIKSNVKKVRTLYNNKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKL Y QL RS++ELAKDWR DK LR LEA++ +ADK +L++TG GDV++PEN +M
Sbjct: 62 EKKLLMYQGQLQRSAIELAKDWRTDKILRKLEALLAVADKETSLIVTGNGDVIQPENNLM 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGGSYA +AA A++ +T +A++I KA+ I + IC+YTN+ ++ L
Sbjct: 122 AIGSGGSYAQAAAIAMIENTSLTAKQIVEKALKITSGICIYTNNIFTIKELTSE 175
>gi|25403657|pir||C84997 heat shock protein hslV [imported] - Buchnera sp. (strain APS)
gi|10039233|dbj|BAB13267.1| heat shock protein hslV [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 170
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 92/165 (55%), Positives = 125/165 (75%), Gaps = 1/165 (0%)
Query: 22 RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
R VVI GDGQ +LG T+MK+N +K+R L +IAGFAG +ADAFTL E +KKL
Sbjct: 2 RLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMFDKKLAM 61
Query: 82 YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
Y QL R+++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE+ ++AIGSGG
Sbjct: 62 YQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPEDDLIAIGSGG 121
Query: 142 SYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
SYA S+ARAL+ +T A +I RK+++IAA+IC+YTNHN ++ L
Sbjct: 122 SYAQSSARALIENTHLDANQIVRKSLNIAANICIYTNHNFTIKEL 166
>gi|313892579|ref|ZP_07826166.1| ATP-dependent protease HslVU, peptidase subunit [Dialister
microaerophilus UPII 345-E]
gi|329121221|ref|ZP_08249848.1| heat shock protein HslV [Dialister micraerophilus DSM 19965]
gi|313118976|gb|EFR42181.1| ATP-dependent protease HslVU, peptidase subunit [Dialister
microaerophilus UPII 345-E]
gi|327470155|gb|EGF15618.1| heat shock protein HslV [Dialister micraerophilus DSM 19965]
Length = 176
Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats.
Identities = 92/175 (52%), Positives = 128/175 (73%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ATTI+ V+KDG +AGDGQV++G V MK ARKVRRL G +IAGFAGS ADAF L
Sbjct: 2 FNATTIIAVKKDGHTAVAGDGQVTMGNAVIMKNTARKVRRLYNGKVIAGFAGSVADAFAL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E KL LLR++VE AKDWR D+ L+ LEA++++ D T +++G G+V+EP+
Sbjct: 62 FDKFEMKLSDCNGNLLRAAVEFAKDWRRDRVLQKLEALLIMTDGTHLFLVSGSGEVIEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+Y +A T+ SA EIA K+++IAADICVYTNHN+++E +
Sbjct: 122 DGILAIGSGGNYALAAARALNAETELSAREIAEKSINIAADICVYTNHNVIVEEI 176
>gi|163791335|ref|ZP_02185748.1| ATP-dependent protease peptidase subunit [Carnobacterium sp. AT7]
gi|159873414|gb|EDP67505.1| ATP-dependent protease peptidase subunit [Carnobacterium sp. AT7]
Length = 179
Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats.
Identities = 86/178 (48%), Positives = 132/178 (74%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+ HATTI ++ DG +AGDGQV++G+ V MK ARKVRR+ ++ GFAGS ADAF
Sbjct: 2 TEFHATTIFAIQHDGKCAMAGDGQVTMGEQVIMKGTARKVRRIYNDEVLVGFAGSVADAF 61
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R++VELA++WR D+ ++ LEA++++ +K L+++G G+V++
Sbjct: 62 TLEEKFEAKLHEYKGNLTRAAVELAQEWRSDRAMQKLEALLIVMNKEEMLMVSGGGEVIQ 121
Query: 130 PENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++AIGSGG++AL+A RAL +A +IA ++++ AADICV+TNHNI++E L
Sbjct: 122 PDDGILAIGSGGNFALAAGRALKKLGKGLTAAQIAEESLNTAADICVFTNHNIIVEEL 179
>gi|157363638|ref|YP_001470405.1| ATP-dependent protease peptidase subunit [Thermotoga lettingae TMO]
gi|189036247|sp|A8F5A7|HSLV_THELT RecName: Full=ATP-dependent protease subunit HslV
gi|157314242|gb|ABV33341.1| 20S proteasome A and B subunits [Thermotoga lettingae TMO]
Length = 176
Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats.
Identities = 84/176 (47%), Positives = 125/176 (71%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
++ +TT+L V ++G V+AGDGQV+ G TVMK ARK+R++G G ++AGFAGS ADA
Sbjct: 1 MEWKSTTVLVVSRNGKTVMAGDGQVTYGNTVMKHGARKIRKIGDGQVLAGFAGSVADAMA 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L +R E KL+++ L +++VELAKDWR D+ LR LEA++L+AD+ L+I+G G+V++P
Sbjct: 61 LFDRFESKLKEWGGNLTKAAVELAKDWRTDRVLRRLEALLLVADRDNVLIISGTGEVVQP 120
Query: 131 ENGVMAIGSG-GSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++ V AIGSG +A + +T A EI K+M IA++IC+YTN NI +E +
Sbjct: 121 DDNVAAIGSGAPYAIAAARALIRNTDLDAREIVEKSMQIASEICIYTNGNITIEEI 176
>gi|116515290|ref|YP_802919.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
Cc (Cinara cedri)]
gi|122285314|sp|Q056X3|HSLV_BUCCC RecName: Full=ATP-dependent protease subunit HslV
gi|116257144|gb|ABJ90826.1| peptidase component of ATP-dependent protease [Buchnera aphidicola
str. Cc (Cinara cedri)]
Length = 178
Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats.
Identities = 93/176 (52%), Positives = 125/176 (71%), Gaps = 3/176 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTIL+VR G VVI GDGQ + G TVMK+N +KVR + K +IAGFAG +ADAFTL E
Sbjct: 2 TTILSVRVQGKVVIGGDGQATFGHTVMKSNVKKVRSIYKNQVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE+Y QL RS++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PEN ++
Sbjct: 62 EKKLEKYQGQLQRSAIELAKDWRTDRLLRKLEALLAVADKKNSLIITGTGDVIQPENDII 121
Query: 136 AIGSGGS---YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG A A + +T A I +K++ IA++IC+YTN + ++ +K
Sbjct: 122 AIGSGGPYAQAAAYAYALVYNTNLKASNIVKKSLQIASNICIYTNQSFTIKEIKSE 177
>gi|219682474|ref|YP_002468858.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
gi|219622207|gb|ACL30363.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
Length = 170
Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats.
Identities = 92/165 (55%), Positives = 125/165 (75%), Gaps = 1/165 (0%)
Query: 22 RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
R VVI GDGQ +LG T+MK+N +K+R L +IAGFAG +ADAFTL E +KKL
Sbjct: 2 RLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMFDKKLAM 61
Query: 82 YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
Y QL R+++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PE+ ++AIGSGG
Sbjct: 62 YQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPEDDLIAIGSGG 121
Query: 142 SYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
SYA S+ARAL+ +T A +I RK+++IAA+IC+YTNHN ++ L
Sbjct: 122 SYAQSSARALIENTNLDANQIVRKSLNIAANICIYTNHNFTIKEL 166
>gi|71083040|ref|YP_265759.1| ATP-dependent protease peptidase subunit [Candidatus Pelagibacter
ubique HTCC1062]
gi|71062153|gb|AAZ21156.1| ATP-dependent protease [Candidatus Pelagibacter ubique HTCC1062]
Length = 171
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 102/170 (60%), Positives = 136/170 (80%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ +RK+ VV+AGDGQVS+G TV+K+ A KVR++ K N+IAGFAGS+ADA TL ERL
Sbjct: 2 TTIVLIRKNNEVVVAGDGQVSMGNTVIKSTAAKVRKIEKRNVIAGFAGSTADALTLFERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE++ L R++VELAKDWR DKYLR LEA++ I DK + +I+G GDVLEPE +
Sbjct: 62 EAKLEKHAGNLPRAAVELAKDWRTDKYLRRLEALMAIGDKENSFIISGTGDVLEPEGDAI 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
IGSGG+YAL+AA+ L+ T SAEE+ARKA+ +A++ICV+TN+NI +E +
Sbjct: 122 GIGSGGNYALAAAKVLLDTDLSAEEVARKAIQVASEICVFTNNNIKIEKI 171
>gi|195953683|ref|YP_002121973.1| ATP-dependent protease peptidase subunit [Hydrogenobaculum sp.
Y04AAS1]
gi|195933295|gb|ACG57995.1| 20S proteasome A and B subunits [Hydrogenobaculum sp. Y04AAS1]
Length = 181
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 90/174 (51%), Positives = 126/174 (72%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+HATT++ VRK+G I DGQV+LG ++K +A+K RRL KG ++ GFAG +AD L+
Sbjct: 8 LHATTVIAVRKNGQTAIGSDGQVTLGSQILKHSAKKTRRLHKGTVLVGFAGGAADGLALM 67
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++ L R+SVELAK+WR D+YLR LEA+++ DK +++G GDV+EP+
Sbjct: 68 ERLEGKLEEHRGNLARASVELAKEWRTDRYLRRLEAVLIACDKESMFLLSGNGDVIEPDE 127
Query: 133 GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++A GSGG +A SAA+AL T SAEEI + ++ IA+DICVYTN + +E L
Sbjct: 128 PILATGSGGDFARSAAKALYYHTDKSAEEIVKISLDIASDICVYTNKHFSIELL 181
>gi|91762535|ref|ZP_01264500.1| ATP-dependent protease [Candidatus Pelagibacter ubique HTCC1002]
gi|91718337|gb|EAS84987.1| ATP-dependent protease [Candidatus Pelagibacter ubique HTCC1002]
Length = 171
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 101/170 (59%), Positives = 136/170 (80%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ +RK+ VV+AGDGQVS+G TV+K+ A KVR++ K N+IAGFAGS+ADA TL ERL
Sbjct: 2 TTIVLIRKNNEVVVAGDGQVSMGNTVIKSTAAKVRKIEKRNVIAGFAGSTADALTLFERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE++ L R++VELAKDWR DKYLR LEA++ I DK + +I+G GDVLEPE +
Sbjct: 62 EAKLEKHAGNLPRAAVELAKDWRTDKYLRRLEALMAIGDKENSFIISGTGDVLEPEGDAI 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
IGSGG+YAL+AA+ L+ T SAEE+A+KA+ +A++ICV+TN+NI +E +
Sbjct: 122 GIGSGGNYALAAAKVLLDTDLSAEEVAKKAIQVASEICVFTNNNIKIEKI 171
>gi|224369850|ref|YP_002604014.1| ATP-dependent protease peptidase subunit [Desulfobacterium
autotrophicum HRM2]
gi|223692567|gb|ACN15850.1| HslV [Desulfobacterium autotrophicum HRM2]
Length = 180
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 96/175 (54%), Positives = 128/175 (73%), Gaps = 1/175 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL VR VV+AGDGQV+LG V K A+KVRR+ II GFAG++ADA TL
Sbjct: 5 FHGTTILAVRHKNWVVVAGDGQVTLGTIVTKHKAKKVRRIYNDKIITGFAGATADALTLS 64
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+LE+KLEQY L RS+VELA++WR DKYLR LEAM++ AD+ T +++G GDV+EP++
Sbjct: 65 EKLEQKLEQYNGNLTRSAVELAREWRTDKYLRRLEAMMIAADEKNTYLLSGNGDVIEPDD 124
Query: 133 GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
GV++IGSG + A +AA+AL + T A I +AM IAA +C+YTN+ I +E +K
Sbjct: 125 GVISIGSGSTAAQAAAQALVVHTDLDARTIVTEAMKIAAALCIYTNNYITIEEMK 179
>gi|220904717|ref|YP_002480029.1| ATP-dependent protease peptidase subunit [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|254802409|sp|B8J0S4|HSLV_DESDA RecName: Full=ATP-dependent protease subunit HslV
gi|219869016|gb|ACL49351.1| 20S proteasome A and B subunits [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 177
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 101/177 (57%), Positives = 134/177 (75%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
++ HATTIL VRKDG+V +AGDGQV++GQT +MK A+KVRRL G I+AGFAG++ADAF
Sbjct: 1 METHATTILAVRKDGIVALAGDGQVTMGQTMIMKHAAQKVRRLHDGKILAGFAGATADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E E KL++ ++R++VE+ KDWR DKYLR LEAM+L+AD+ LV++G GDV+E
Sbjct: 61 TLFELFESKLKEVRGHMVRAAVEMTKDWRKDKYLRKLEAMLLLADREHILVLSGTGDVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ V AIGSGG Y +A + AE IAR++M IAA+ICVYTN ++ LETL
Sbjct: 121 PDDNVAAIGSGGPYALAAARALSRHSGLDAETIARESMRIAAEICVYTNDHVTLETL 177
>gi|121611468|ref|YP_999275.1| ATP-dependent protease peptidase subunit [Verminephrobacter
eiseniae EF01-2]
gi|189036250|sp|A1WRK0|HSLV_VEREI RecName: Full=ATP-dependent protease subunit HslV
gi|121556108|gb|ABM60257.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
family T01B [Verminephrobacter eiseniae EF01-2]
Length = 179
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 93/178 (52%), Positives = 126/178 (70%), Gaps = 5/178 (2%)
Query: 13 MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TTIL+VR+ V I GDGQV+LG V+K ARKVR+L G ++AGFAG++ADA
Sbjct: 2 FHGTTILSVRRQTPQGVQVAIGGDGQVTLGAIVVKGTARKVRKLHHGKVLAGFAGATADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTL ER E KL+++ L+RS++EL KDWR D+ LR LEAM+ +AD+ +L+ITG GDVL
Sbjct: 62 FTLFERFEAKLDKHQGHLVRSAIELTKDWRTDRVLRRLEAMLAVADQESSLIITGNGDVL 121
Query: 129 EPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPE G++AIGSGG +A L T SA +I ++A+ IA ++C+YTN + +ETL
Sbjct: 122 EPEQGIIAIGSGGAYANAAAKALLNHTDLSAADIVKQALEIAGELCIYTNMHHTIETL 179
>gi|328948446|ref|YP_004365783.1| ATP-dependent protease hslV [Treponema succinifaciens DSM 2489]
gi|328448770|gb|AEB14486.1| ATP-dependent protease hslV [Treponema succinifaciens DSM 2489]
Length = 180
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 93/175 (53%), Positives = 137/175 (78%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TT++ VR++G V +AGDGQV++G TVMK NA+KVRR+ G ++ GFAG++ADAFTL
Sbjct: 6 KIRSTTVIAVRRNGKVAMAGDGQVTMGNTVMKGNAKKVRRIYDGKVLTGFAGATADAFTL 65
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
++ E+KL+ + L R++VELAK WR ++ + LEA++L+AD L+I+G GDV+EPE
Sbjct: 66 FDKFEEKLKTFNGDLTRAAVELAKLWRTERSMSKLEALLLVADSKKILLISGSGDVIEPE 125
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
N ++AIGSGG+YA +AA A M +Q SA+EIA+K+++IA IC+YTN N+V+E L
Sbjct: 126 NDILAIGSGGNYAYAAAMAYMESSQFSAKEIAQKSLAIAGQICIYTNSNVVVEEL 180
>gi|89093514|ref|ZP_01166462.1| ATP-dependent protease peptidase subunit [Oceanospirillum sp.
MED92]
gi|89082204|gb|EAR61428.1| ATP-dependent protease peptidase subunit [Oceanospirillum sp.
MED92]
Length = 176
Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats.
Identities = 94/172 (54%), Positives = 131/172 (76%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ VV+ GDGQVSLG TVMK ARKVRRL K + I GFAGS+ADA TLL+
Sbjct: 2 TTIVSVRRGDKVVVGGDGQVSLGNTVMKGTARKVRRLAKHDTITGFAGSTADAITLLDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ + + V LAK+WR D+ LR LEA++L+A+K T +I+G GD++EPE+GV+
Sbjct: 62 EAQLEKHQGNIFNAVVSLAKEWRGDRVLRKLEALMLVANKEKTYLISGSGDIIEPEDGVI 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG++AL+AARAL +T+ A++I K++ IAA ICV++N N+ +E L
Sbjct: 122 AIGSGGNFALAAARALTDNTELPAKDIVEKSLQIAAGICVFSNDNLTIEELD 173
>gi|312792641|ref|YP_004025564.1| 20S proteasome subunits A and B [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179781|gb|ADQ39951.1| 20S proteasome A and B subunits [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 176
Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats.
Identities = 93/175 (53%), Positives = 123/175 (70%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ +MK+ A+KVR+L G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGRVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++ADK V++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKEHLFVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ + AIGSGG Y +A L +T SA EIA+KA+ IAA ICVYTN+NI + L
Sbjct: 122 DNIAAIGSGGPYALAAARALLQNTDLSAAEIAKKALEIAASICVYTNNNITVLEL 176
>gi|91205632|ref|YP_537987.1| ATP-dependent protease peptidase subunit [Rickettsia bellii
RML369-C]
gi|157827343|ref|YP_001496407.1| ATP-dependent protease peptidase subunit [Rickettsia bellii OSU
85-389]
gi|122425542|sp|Q1RIB6|HSLV_RICBR RecName: Full=ATP-dependent protease subunit HslV
gi|166222994|sp|A8GWX0|HSLV_RICB8 RecName: Full=ATP-dependent protease subunit HslV
gi|91069176|gb|ABE04898.1| Heat shock protein HslV [Rickettsia bellii RML369-C]
gi|157802647|gb|ABV79370.1| ATP-dependent protease peptidase subunit [Rickettsia bellii OSU
85-389]
Length = 182
Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats.
Identities = 106/179 (59%), Positives = 139/179 (77%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ +H TTIL ++K+ ++IA DGQVS G TV+K+ ARK+R + IIAGFAGS+AD
Sbjct: 3 DNLALHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTADG 62
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
L E+LE K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD+ L++TG GDV+
Sbjct: 63 LALFEKLEVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRNHILILTGNGDVV 122
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPEN V AIGSGG +ALSAARALMS +AEEIA K+M+IAAD+CV++NHNI+ E +
Sbjct: 123 EPENNVAAIGSGGLFALSAARALMSYDNPLTAEEIALKSMNIAADLCVFSNHNIITEKV 181
>gi|219681919|ref|YP_002468305.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
5A (Acyrthosiphon pisum)]
gi|219624762|gb|ACL30917.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
5A (Acyrthosiphon pisum)]
Length = 170
Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats.
Identities = 93/165 (56%), Positives = 125/165 (75%), Gaps = 1/165 (0%)
Query: 22 RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
R VVI GDGQ +LG T+MK+N +K+R L +IAGFAG +ADAFTL E +KKL
Sbjct: 2 RLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMFDKKLAM 61
Query: 82 YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
Y QL R+++ELAKDWR D+ LR LEA++ +ADK +L+ITG GDV++PEN ++AIGSGG
Sbjct: 62 YQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPENDLIAIGSGG 121
Query: 142 SYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
SYA S+ARAL+ +T A +I RK+++IAA+IC+YTNHN ++ L
Sbjct: 122 SYAQSSARALIENTNLDANQIVRKSLNIAANICIYTNHNFTIKEL 166
>gi|226227911|ref|YP_002762017.1| ATP-dependent protease HslV [Gemmatimonas aurantiaca T-27]
gi|259491388|sp|C1ABE1|HSLV_GEMAT RecName: Full=ATP-dependent protease subunit HslV
gi|226091102|dbj|BAH39547.1| ATP-dependent protease HslV [Gemmatimonas aurantiaca T-27]
Length = 181
Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats.
Identities = 96/175 (54%), Positives = 130/175 (74%), Gaps = 1/175 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
++ ATTIL VR++G V I GDGQVS+G TV K A KVR L G ++AGFAGS ADA T
Sbjct: 4 PQVRATTILAVRRNGQVAIGGDGQVSVGDTVAKQRAVKVRTLKGGRVLAGFAGSVADALT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E+KLE+YP L R+SVELAK+WR D+ LR LEAM+++AD +++G G+++EP
Sbjct: 64 LFEKFEEKLERYPGNLPRASVELAKEWRSDRVLRRLEAMLIVADVEHGFMLSGNGELIEP 123
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
++G++AIGSGG+YA +AARALM TQ +I KA++IA +IC+YTN NI +
Sbjct: 124 DDGILAIGSGGAYAQAAARALMRETQLPPRDIVEKALTIAGEICIYTNTNITVLE 178
>gi|59712884|ref|YP_205660.1| ATP-dependent protease peptidase subunit [Vibrio fischeri ES114]
gi|59480985|gb|AAW86772.1| peptidase component of the HslUV protease [Vibrio fischeri ES114]
Length = 193
Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats.
Identities = 91/171 (53%), Positives = 127/171 (74%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+AGDGQ S G + K N +KVRRL +++ GFAGS+ADAF L +
Sbjct: 21 TTIVSVRREGKVVVAGDGQASQGDMIAKGNVKKVRRLYNDSVLVGFAGSTADAFILFDLC 80
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAK+WR D+ LR LEAM+++ADKT +L+I+G GD++ +N ++
Sbjct: 81 ERKLEMHQGNLTKAAVELAKEWRSDRALRRLEAMLIVADKTTSLIISGTGDLINADNDLL 140
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
IGSGG +A SAA AL+ +T A EIA KA++IA DI VYTNHN +E L
Sbjct: 141 TIGSGGYFARSAATALLENTDLDAREIATKALTIAGDIDVYTNHNHTVEEL 191
>gi|312876489|ref|ZP_07736472.1| 20S proteasome A and B subunits [Caldicellulosiruptor lactoaceticus
6A]
gi|311796700|gb|EFR13046.1| 20S proteasome A and B subunits [Caldicellulosiruptor lactoaceticus
6A]
Length = 176
Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats.
Identities = 94/175 (53%), Positives = 124/175 (70%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ +MK+ A+KVR+L G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGRVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++ADK LV++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKEHLLVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ + AIGSGG Y +A L +T SA EIA+KA+ IAA ICVYTN+NI + L
Sbjct: 122 DNIAAIGSGGPYALAAARALLQNTDLSAAEIAKKALEIAASICVYTNNNITVLEL 176
>gi|312135860|ref|YP_004003198.1| 20S proteasome subunits A and B [Caldicellulosiruptor owensensis
OL]
gi|311775911|gb|ADQ05398.1| 20S proteasome A and B subunits [Caldicellulosiruptor owensensis
OL]
Length = 176
Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats.
Identities = 93/175 (53%), Positives = 123/175 (70%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ +MK+ A+KVR+L G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGRVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++ADK V++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKDHLFVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ + AIGSGG Y +A L +T SA EIA+KA+ IAA ICVYTN+NI + L
Sbjct: 122 DNIAAIGSGGPYALAAARALLQNTDLSAAEIAKKALEIAASICVYTNNNITVLEL 176
>gi|323339877|ref|ZP_08080146.1| heat shock protein HslV [Lactobacillus ruminis ATCC 25644]
gi|323092750|gb|EFZ35353.1| heat shock protein HslV [Lactobacillus ruminis ATCC 25644]
Length = 180
Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats.
Identities = 91/179 (50%), Positives = 129/179 (72%), Gaps = 3/179 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADA 68
A+ HATTI VR +G +AGDGQV++G+ V MK A KVR++ G ++ GFAGS ADA
Sbjct: 2 AISFHATTICAVRHNGKTAMAGDGQVTMGEKVIMKGTAHKVRKIYDGKVVVGFAGSVADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F L +R EKKL QY L R++VELA++WR D+ L+ LEA++++ D L+++G G+V+
Sbjct: 62 FNLEDRFEKKLNQYSGNLQRAAVELAQEWRSDQALQKLEALLIVMDAKNLLLVSGSGEVI 121
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
EP++ V+AIGSGG+YAL+AA+A+ SA EIA+ A+ IA DI ++TNHNI+ E L
Sbjct: 122 EPDDDVLAIGSGGNYALAAAKAMTKYADGMSAAEIAKAAIGIAGDIDIFTNHNIICEEL 180
>gi|269925576|ref|YP_003322199.1| 20S proteasome A and B subunits [Thermobaculum terrenum ATCC
BAA-798]
gi|269789236|gb|ACZ41377.1| 20S proteasome A and B subunits [Thermobaculum terrenum ATCC
BAA-798]
Length = 185
Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats.
Identities = 92/184 (50%), Positives = 124/184 (67%), Gaps = 1/184 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
H M ATTIL V +DG++ +AGDGQV+ G ++ K ARKVR L G ++ GFAG+ A
Sbjct: 2 SHNPPMMRATTILAVLRDGLLAMAGDGQVTFGDSIFKHKARKVRTLYDGKVLVGFAGAVA 61
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DA TL ER E +L+QY L RS+VELAK WR D+YLR LEA +++ D L+ITG G+
Sbjct: 62 DALTLFERFESQLQQYSGDLRRSAVELAKQWRTDRYLRPLEAELIVGDPGQLLLITGQGE 121
Query: 127 VLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+EP+ G++AIGSG Y +A L T AE I +AM IAA++C+YTN NI +ET+
Sbjct: 122 VIEPDEGILAIGSGSVYALAAAQALLRHTNMDAEHITLEAMKIAAELCIYTNDNITIETI 181
Query: 186 KVGD 189
+ +
Sbjct: 182 RAEN 185
>gi|320535375|ref|ZP_08035489.1| ATP-dependent protease HslVU, peptidase subunit [Treponema
phagedenis F0421]
gi|320147777|gb|EFW39279.1| ATP-dependent protease HslVU, peptidase subunit [Treponema
phagedenis F0421]
Length = 193
Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats.
Identities = 95/175 (54%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TT++ VRK+G + +AGDGQV++G TVMK NARKVR++ G II GFAG++ADAFTL
Sbjct: 19 KVRSTTVIAVRKNGKIAMAGDGQVTMGNTVMKGNARKVRKIYDGKIITGFAGATADAFTL 78
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LE+ + KL+ Y L R++VELAK+WR DK L+NLEA++L+ADK L+I+G GD++EP+
Sbjct: 79 LEKFDGKLKTYNGDLTRAAVELAKEWRTDKMLKNLEALLLVADKDTILLISGNGDIIEPQ 138
Query: 132 NGVMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+ +A L +T+ +A+EIA K++ IA IC+YTNH I LE L
Sbjct: 139 EDTIAIGSGGNYAYAAALALLRNTELTAKEIAEKSLEIAGQICIYTNHTIQLEEL 193
>gi|197335089|ref|YP_002157072.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Vibrio fischeri MJ11]
gi|238065951|sp|B5FBL7|HSLV_VIBFM RecName: Full=ATP-dependent protease subunit HslV
gi|197316579|gb|ACH66026.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Vibrio fischeri MJ11]
Length = 174
Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats.
Identities = 91/171 (53%), Positives = 127/171 (74%), Gaps = 1/171 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VV+AGDGQ S G + K N +KVRRL +++ GFAGS+ADAF L +
Sbjct: 2 TTIVSVRREGKVVVAGDGQASQGDMIAKGNVKKVRRLYNDSVLVGFAGSTADAFILFDLC 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAK+WR D+ LR LEAM+++ADKT +L+I+G GD++ +N ++
Sbjct: 62 ERKLEMHQGNLTKAAVELAKEWRSDRALRRLEAMLIVADKTTSLIISGTGDLINADNDLL 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
IGSGG +A SAA AL+ +T A EIA KA++IA DI VYTNHN +E L
Sbjct: 122 TIGSGGYFARSAATALLENTDLDAREIATKALTIAGDIDVYTNHNHTVEEL 172
>gi|297617132|ref|YP_003702291.1| 20S proteasome A and subunit betas [Syntrophothermus lipocalidus
DSM 12680]
gi|297144969|gb|ADI01726.1| 20S proteasome A and B subunits [Syntrophothermus lipocalidus DSM
12680]
Length = 177
Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats.
Identities = 95/176 (53%), Positives = 126/176 (71%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
ATTI+ V+KDG V IAGDGQV+ GQT V+KA A+K+R L G ++AGFAGS ADA TL
Sbjct: 2 FRATTIVAVKKDGEVTIAGDGQVTYGQTFVLKAQAKKIRTLYNGKVLAGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E L + L R++VE+AK WR D+ LR LEA++++ADK +I+G G+V+EP+
Sbjct: 62 FERFEDCLRESNGNLTRAAVEVAKQWRTDRVLRRLEALLIVADKEKMFLISGSGEVIEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ V+AIGSGG Y +A L TQ S+ EIA +A+ IAA+ICV+TN NI +E LK
Sbjct: 122 DQVVAIGSGGPYALAAARALLRHTQLSSREIAEEALRIAAEICVFTNGNISVEQLK 177
>gi|30250192|ref|NP_842262.1| ATP-dependent protease peptidase subunit [Nitrosomonas europaea
ATCC 19718]
gi|47605675|sp|Q82SP7|HSLV_NITEU RecName: Full=ATP-dependent protease subunit HslV
gi|30180987|emb|CAD86172.1| Multispecific proteasome proteases [Nitrosomonas europaea ATCC
19718]
Length = 173
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 102/172 (59%), Positives = 131/172 (76%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ V + GDGQV+LG V KA+ARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGRQVALGGDGQVTLGAVVAKASARKVRRLYHNKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE++ L+RS+VELAKDWR D+ LR LEAM+++AD TL+ITG GDV+EPE G+
Sbjct: 62 EAKLEKHQGHLMRSAVELAKDWRTDRILRRLEAMLVVADHEATLIITGAGDVIEPEQGIA 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG+YA +AARAL+ +T S +EI KA++IA DIC+YTN V+E L
Sbjct: 122 AIGSGGAYAQAAARALLENTDLSPKEIVTKALTIAGDICIYTNQVHVIEQLD 173
>gi|51473514|ref|YP_067271.1| ATP-dependent protease peptidase subunit [Rickettsia typhi str.
Wilmington]
gi|85542207|sp|Q68X53|HSLV_RICTY RecName: Full=ATP-dependent protease subunit HslV
gi|51459826|gb|AAU03789.1| heat shock protein ATP dependent protease HslV [Rickettsia typhi
str. Wilmington]
Length = 182
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 105/179 (58%), Positives = 141/179 (78%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ +H TTIL ++K+ ++IA DGQVS G TV+K+ ARK+R + II GFAGS+AD
Sbjct: 3 DNLALHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIVGFAGSTADG 62
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
L E+LE K+EQY + LLRS+VELAKDWR DKYLR LEAM+++AD++ L++TG GDV+
Sbjct: 63 LALFEKLEIKIEQYNSNLLRSAVELAKDWRNDKYLRRLEAMMIVADRSHILILTGNGDVI 122
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPEN + AIGSGG +ALSAARALMS + +AEEIA K+M+IAAD+CV++NHNI++E +
Sbjct: 123 EPENNIAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEKV 181
>gi|115379319|ref|ZP_01466428.1| ATP-dependent protease HslV [Stigmatella aurantiaca DW4/3-1]
gi|115363664|gb|EAU62790.1| ATP-dependent protease HslV [Stigmatella aurantiaca DW4/3-1]
Length = 166
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 100/165 (60%), Positives = 132/165 (80%), Gaps = 1/165 (0%)
Query: 22 RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
R++G VVIAGDGQVSL +T+MK A+KVRR+G+GN++AGFAGS+ADAFTL ER E KL++
Sbjct: 2 RREGKVVIAGDGQVSLDKTIMKNTAKKVRRIGEGNVLAGFAGSTADAFTLFERFEAKLKE 61
Query: 82 YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
+ L R+ VEL KDWR D++LR LEA++++AD+ T +++G GDV+EP++G+ A+GSGG
Sbjct: 62 HQKNLARACVELGKDWRTDRFLRRLEALLIVADREKTFILSGAGDVIEPDHGIAAVGSGG 121
Query: 142 SYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
YALSAARAL T SA EIA AM+IAADICVYTN ++ E L
Sbjct: 122 HYALSAARALQAHTSLSAREIATHAMAIAADICVYTNSHVTFEEL 166
>gi|78188753|ref|YP_379091.1| ATP-dependent protease peptidase subunit [Chlorobium
chlorochromatii CaD3]
gi|123580058|sp|Q3ASH7|HSLV_CHLCH RecName: Full=ATP-dependent protease subunit HslV
gi|78170952|gb|ABB28048.1| heat shock protein HslV [Chlorobium chlorochromatii CaD3]
Length = 182
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 95/176 (53%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
++ +TT++ V ++G + DGQ++LG TV+K + +K+RRL +G ++AGFAG++ADA T
Sbjct: 7 PEIRSTTVIGVIRNGQAALGSDGQMTLGNTVVKHSTKKIRRLYQGKLLAGFAGATADALT 66
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LL+R E KLE + +L R+SVELA+DWR DKYLR LEAMI I L+I+G GDV+EP
Sbjct: 67 LLDRFEAKLEAFGGKLERASVELARDWRTDKYLRRLEAMIAIVSNDRALIISGTGDVIEP 126
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E+G++AIGSG YAL+AAR+LM T SA+EI +++++IAADIC+YTN++IV+E L
Sbjct: 127 EDGIVAIGSGSMYALAAARSLMKHTSLSAQEIVQESLAIAADICIYTNNHIVVEEL 182
>gi|222530145|ref|YP_002574027.1| ATP-dependent protease peptidase subunit [Caldicellulosiruptor
bescii DSM 6725]
gi|254802327|sp|B9MM31|HSLV_ANATD RecName: Full=ATP-dependent protease subunit HslV
gi|222456992|gb|ACM61254.1| 20S proteasome A and B subunits [Caldicellulosiruptor bescii DSM
6725]
Length = 176
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 95/175 (54%), Positives = 123/175 (70%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ +MK+ A+KVR+L G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGKVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++ADK V++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKDHLFVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ + AIGSGG Y +A L ST SA EIARKA+ IAA ICVYTN+NI + L
Sbjct: 122 DNIAAIGSGGPYALAAARALLQSTDLSAAEIARKALEIAASICVYTNNNITVLEL 176
>gi|294507659|ref|YP_003571717.1| ATP-dependent protease hslV [Salinibacter ruber M8]
gi|294343987|emb|CBH24765.1| ATP-dependent protease hslV [Salinibacter ruber M8]
Length = 187
Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats.
Identities = 91/179 (50%), Positives = 131/179 (73%), Gaps = 2/179 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATT+L VR +G + + DGQ ++ +TV+K A KVR L G+I+AGFAGS+ADAFTL E
Sbjct: 9 HATTVLGVRHNGQIALGSDGQATMNETVVKHKAEKVRSLYDGDILAGFAGSTADAFTLFE 68
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
R E+KL++Y + R++VELAK+WR DKYLR LEA++ +A L+I+G GDV+EP++
Sbjct: 69 RFEEKLQEYGGNVARAAVELAKEWRTDKYLRRLEALLAVASPGELLLISGAGDVIEPDDD 128
Query: 134 VMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
++AIGSGGS+AL+A+RAL+ +A +I +SIAADIC+YTNHN + ++ +
Sbjct: 129 IIAIGSGGSFALAASRALLQNAQGLTARDIVENGLSIAADICIYTNHNRTIRDIEAESD 187
>gi|189501499|ref|YP_001957216.1| ATP-dependent protease peptidase subunit [Candidatus Amoebophilus
asiaticus 5a2]
gi|238692319|sp|B3EU68|HSLV_AMOA5 RecName: Full=ATP-dependent protease subunit HslV
gi|189496940|gb|ACE05487.1| 20S proteasome A and B subunits [Candidatus Amoebophilus asiaticus
5a2]
Length = 179
Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats.
Identities = 89/178 (50%), Positives = 130/178 (73%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+K+ +TT++ V + V I DGQ ++G TV+K N K+R+L G ++ GFAGS+ADAFT
Sbjct: 2 LKIKSTTVIAVMHNNEVAIGADGQATMGSTVVKGNVNKIRKLLDGKVLTGFAGSTADAFT 61
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LL+R ++KL++Y + RS++ELAKDWR D+YLR LEAM++ +K L+I+G GDV+EP
Sbjct: 62 LLDRFDEKLQRYFGHMKRSAIELAKDWRTDRYLRRLEAMLIAVNKEELLLISGTGDVIEP 121
Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+NG++ IGSG YA SAA AL +AEEI R++++IAADIC+YTN N+ +E +
Sbjct: 122 DNGIVTIGSGSLYAESAAIALKKHAPHLTAEEIVRESLTIAADICIYTNDNLTIEKIS 179
>gi|313674855|ref|YP_004052851.1| ATP dependent peptidase codwx, codw component [Marivirga tractuosa
DSM 4126]
gi|312941553|gb|ADR20743.1| ATP dependent peptidase CodWX, CodW component [Marivirga tractuosa
DSM 4126]
Length = 180
Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats.
Identities = 93/177 (52%), Positives = 128/177 (72%), Gaps = 3/177 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TT+ V G V I DGQ ++G TV K+N +K+R+L G I+ GFAGS+ADAF L
Sbjct: 3 KIRSTTVCAVVHKGQVAIGADGQATMGNTVAKSNVKKIRKLQDGKIVTGFAGSTADAFNL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LE+ ++KL + + RS++ELAK+WR D+YLR LEAM+++ADK L+I+G GDVLEP+
Sbjct: 63 LEKFDEKLNAFGGNMKRSAIELAKEWRTDRYLRKLEAMMIVADKDEVLIISGTGDVLEPD 122
Query: 132 NGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
N + IGSG YA SAA AL SAE+I R+++ IAADIC+YTNHN+V+ET+
Sbjct: 123 NQIATIGSGSMYAQSAATALKKHAGDKLSAEDIVRESLHIAADICIYTNHNLVVETI 179
>gi|70733941|ref|YP_257581.1| ATP-dependent protease peptidase subunit [Pseudomonas fluorescens
Pf-5]
gi|123658507|sp|Q4KJK2|HSLV_PSEF5 RecName: Full=ATP-dependent protease subunit HslV
gi|68348240|gb|AAY95846.1| heat shock protein HslV [Pseudomonas fluorescens Pf-5]
Length = 176
Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats.
Identities = 93/175 (53%), Positives = 126/175 (72%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AI-GSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+ G +A+ L T SA EI A+ IA DICV+TNH +E + +
Sbjct: 122 AMGSGGAYAQAAASALLKKTDLSAREIVETALGIAGDICVFTNHTQTIEEQDLAE 176
>gi|194333991|ref|YP_002015851.1| ATP-dependent protease peptidase subunit [Prosthecochloris
aestuarii DSM 271]
gi|238693333|sp|B4S817|HSLV_PROA2 RecName: Full=ATP-dependent protease subunit HslV
gi|194311809|gb|ACF46204.1| 20S proteasome A and B subunits [Prosthecochloris aestuarii DSM
271]
Length = 182
Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats.
Identities = 93/181 (51%), Positives = 134/181 (74%), Gaps = 1/181 (0%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
++ ++ ATT+L V ++G + DGQ++LG TV+K + +K+RR+ N+I GFAG++
Sbjct: 2 NRSEKPQLRATTVLGVIRNGKAALGSDGQMTLGNTVIKHSTKKIRRIQHANLITGFAGAT 61
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADA TLL+R ++KL+ + QL RS+VELA+DWR DKYLR LEAM+ + L+I+G G
Sbjct: 62 ADAVTLLDRFDEKLQAFGGQLERSAVELARDWRTDKYLRRLEAMLAVVSADKALIISGTG 121
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLET 184
DV+EPE+G++AIGSG YALSAARAL+ T SA EI +++ IAADIC+YTN +IV+E
Sbjct: 122 DVIEPEDGIVAIGSGSMYALSAARALIRYTDLSAREIVTESLKIAADICIYTNDHIVVEE 181
Query: 185 L 185
+
Sbjct: 182 V 182
>gi|312126813|ref|YP_003991687.1| 20S proteasome subunits A and B [Caldicellulosiruptor
hydrothermalis 108]
gi|311776832|gb|ADQ06318.1| 20S proteasome A and B subunits [Caldicellulosiruptor
hydrothermalis 108]
Length = 176
Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats.
Identities = 94/175 (53%), Positives = 123/175 (70%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ +MK+ A+KVR+L G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGRVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++ADK V++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKEHLFVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ + AIGSGG Y +A L ST SA EIA+KA+ IAA ICVYTN+NI + L
Sbjct: 122 DNIAAIGSGGPYALAAARALLQSTDLSAAEIAKKALEIAASICVYTNNNITVLEL 176
>gi|302035681|ref|YP_003796003.1| heat shock protein hslUV, peptidase component [Candidatus
Nitrospira defluvii]
gi|300603745|emb|CBK40077.1| Heat shock protein HslUV, peptidase component [Candidatus
Nitrospira defluvii]
Length = 178
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 91/177 (51%), Positives = 132/177 (74%), Gaps = 1/177 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ + +TT+L VR+ V + DGQV++G TVMK NARK+RR+ ++AGFAG++ADAFT
Sbjct: 1 MTIRSTTVLCVRRGSQVTMGCDGQVTVGTTVMKHNARKMRRMHGDTVLAGFAGATADAFT 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELAKDWR D+ LR LEA++ +AD + +I+G GDV+EP
Sbjct: 61 LFEKFEAKLAEYRGNLTRAAVELAKDWRTDRVLRRLEALLAVADLDHSFIISGTGDVVEP 120
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
E+G++AIGSGG YAL+AARAL+ ++ AE++ R+++ IA I +YTN IV+E+L
Sbjct: 121 EDGILAIGSGGPYALAAARALLGHSELVAEQVVRESLMIAGGIDIYTNQQIVIESLS 177
>gi|168026447|ref|XP_001765743.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682920|gb|EDQ69334.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 460
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 109/219 (49%), Positives = 139/219 (63%), Gaps = 32/219 (14%)
Query: 1 MVVMGDKHYAVK---MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI 57
MV +H + M TT+L VRKD V+I GDGQV+LG ++K N RKVRRLG N+
Sbjct: 1 MVAFSLRHMHTENRGMLGTTVLCVRKDNKVIIIGDGQVTLGNEIIKPNVRKVRRLG-ANV 59
Query: 58 IAGFAGSSADAFTLLERLEKKLEQYPNQ---LLRSSVELAKDWRMDKYLRNLEAMILIAD 114
I GFAG +AD+FTL ERLE KLE++ L R++VELAK WR DK+LR L+A++++AD
Sbjct: 60 IGGFAGGTADSFTLFERLETKLEEHSGNVWQLTRAAVELAKAWRTDKFLRRLDAVMVVAD 119
Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEI------------ 161
I+L ITG GDVLEP +GV+ IGSGGSYA +AARAL+ AE I
Sbjct: 120 AEISLTITGNGDVLEPYDGVIGIGSGGSYASAAARALIDLPDWGAEAIDIQSPNWDVDDC 179
Query: 162 ------------ARKAMSIAADICVYTNHNIVLETLKVG 188
A+KAM IAAD C+YTNHN +E ++V
Sbjct: 180 VLGCVLGVYDFSAKKAMKIAADCCIYTNHNFTIEQIEVA 218
>gi|157964395|ref|YP_001499219.1| ATP-dependent protease peptidase subunit [Rickettsia massiliae
MTU5]
gi|157844171|gb|ABV84672.1| Heat shock protein HslV [Rickettsia massiliae MTU5]
Length = 190
Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats.
Identities = 107/185 (57%), Positives = 144/185 (77%), Gaps = 5/185 (2%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+M D + +H TTIL ++K+ ++IA DGQVS G TV+K+ ARK+R + IIAGFA
Sbjct: 8 IMSDN---LALHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFA 64
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
GS+AD L E+L K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD++ L++T
Sbjct: 65 GSTADGLALFEKLAVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILT 124
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNI 180
G GDV+EPEN V AIGSGG +ALSAARALMS + +AEEIA K+M+IAAD+CV++NHNI
Sbjct: 125 GNGDVVEPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNI 184
Query: 181 VLETL 185
++E +
Sbjct: 185 IMEKV 189
>gi|312621562|ref|YP_004023175.1| 20S proteasome subunits A and B [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202029|gb|ADQ45356.1| 20S proteasome A and B subunits [Caldicellulosiruptor
kronotskyensis 2002]
Length = 176
Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats.
Identities = 95/175 (54%), Positives = 123/175 (70%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI+ V+K V IAGDGQV+ +MK+ A+KVR+L G ++ GFAGS ADA TL
Sbjct: 2 FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGKVLVGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E+KLEQ L +S VELAK+WR DK LR LEA++++ADK V++G G+V+EP+
Sbjct: 62 CEKFEEKLEQNSGNLQKSVVELAKEWRQDKILRRLEALMVVADKDHLFVVSGSGEVVEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ + AIGSGG Y +A L ST SA EIARKA+ IAA ICVYTN+NI + L
Sbjct: 122 DNIAAIGSGGPYALAAARALLQSTDLSAAEIARKALEIAASICVYTNNNITVLEL 176
>gi|33152976|ref|NP_874329.1| ATP-dependent protease peptidase subunit [Haemophilus ducreyi
35000HP]
gi|47605650|sp|Q7VKB4|HSLV_HAEDU RecName: Full=ATP-dependent protease subunit HslV
gi|33149201|gb|AAP96718.1| ATP-dependent protease HslV [Haemophilus ducreyi 35000HP]
Length = 173
Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats.
Identities = 92/172 (53%), Positives = 128/172 (74%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG V K RKVRRL K +I GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNCVEKGTVRKVRRLYKDKVITGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLVKSAVELAKEWRTERALRKLEAMMIVANESEFLLVSGSGDVIEPEQDVL 121
Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG++A SAA AL+ T+ +A++I +A+ IA DI +Y+NHN V+E +
Sbjct: 122 AIGSGGNFAKSAALALLRTENNLTAKQIVAEALKIAGDIDIYSNHNHVIEEV 173
>gi|57236973|ref|YP_178774.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
RM1221]
gi|86149885|ref|ZP_01068114.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni CF93-6]
gi|88596932|ref|ZP_01100168.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 84-25]
gi|148926639|ref|ZP_01810320.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205355513|ref|ZP_03222284.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|218562308|ref|YP_002344087.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|11133089|sp|Q9PHK9|HSLV_CAMJE RecName: Full=ATP-dependent protease subunit HslV
gi|81557530|sp|Q5HVB1|HSLV_CAMJR RecName: Full=ATP-dependent protease subunit HslV
gi|57165777|gb|AAW34556.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
RM1221]
gi|85839703|gb|EAQ56963.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni CF93-6]
gi|88190621|gb|EAQ94594.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 84-25]
gi|112360014|emb|CAL34804.1| ATP-dependent protease HslV [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|145845158|gb|EDK22253.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205346747|gb|EDZ33379.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
CG8421]
gi|315058078|gb|ADT72407.1| ATP-dependent protease HslV [Campylobacter jejuni subsp. jejuni S3]
gi|315926780|gb|EFV06154.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315929327|gb|EFV08535.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni
305]
Length = 180
Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats.
Identities = 88/176 (50%), Positives = 122/176 (69%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L+ LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + AIGSGG+YALSAARAL T EE+ + ++ IA +IC+YTN NI ++
Sbjct: 122 GQIAAIGSGGNYALSAARALAKHTDLDEEELVKSSLQIAGEICIYTNTNIKTYVIE 177
>gi|260892477|ref|YP_003238574.1| 20S proteasome A and B subunits [Ammonifex degensii KC4]
gi|260864618|gb|ACX51724.1| 20S proteasome A and B subunits [Ammonifex degensii KC4]
Length = 177
Score = 263 bits (674), Expect = 7e-69, Method: Composition-based stats.
Identities = 91/177 (51%), Positives = 126/177 (71%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+++ TTI+ VR++G +AGDGQV+L TV+K NARKVRRL +G ++AGFAGS ADA
Sbjct: 1 MRLEGTTIVAVRRNGRTAMAGDGQVTLAQNTVIKHNARKVRRLYQGRVLAGFAGSVADAL 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E E K+E+ LLR++V LAK+WR D+ LEA++++AD L+ITG G+VLE
Sbjct: 61 TLFECFESKIEEAQGNLLRAAVNLAKEWRTDRRFERLEALLVVADTEHLLLITGGGEVLE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++A+GSGG + +A L T A IAR+A+ IAA ICVYTN NIV+E +
Sbjct: 121 PDDGIVAVGSGGPFALAAARALLHHTDYDAATIAREALRIAASICVYTNENIVVEEI 177
>gi|304560537|gb|ADM43201.1| ATP-dependent protease HslV [Edwardsiella tarda FL6-60]
Length = 163
Score = 263 bits (674), Expect = 7e-69, Method: Composition-based stats.
Identities = 90/159 (56%), Positives = 118/159 (74%), Gaps = 1/159 (0%)
Query: 29 IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
I GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E E+KLE + L++
Sbjct: 2 IGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELFERKLELHQGHLVK 61
Query: 89 SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA 148
++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSGG YA +AA
Sbjct: 62 AAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQAAA 121
Query: 149 RALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
RAL+ +T+ A +I KA+ IA DIC+YTN +E L
Sbjct: 122 RALLENTELGARDIVEKALGIAGDICIYTNQFHTIEELD 160
>gi|67458907|ref|YP_246531.1| ATP-dependent protease peptidase subunit [Rickettsia felis
URRWXCal2]
gi|75536652|sp|Q4UM54|HSLV_RICFE RecName: Full=ATP-dependent protease subunit HslV
gi|67004440|gb|AAY61366.1| Heat shock protein HslV [Rickettsia felis URRWXCal2]
Length = 182
Score = 263 bits (674), Expect = 7e-69, Method: Composition-based stats.
Identities = 105/179 (58%), Positives = 141/179 (78%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ +H TTIL ++K+ ++IA DGQVS G T++K+ ARK+R + IIAGFAGS+AD
Sbjct: 3 DNLALHGTTILCLKKNEEIIIAADGQVSHGNTILKSTARKLRTIANNKIIAGFAGSTADG 62
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
L E+LE K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD+ L++TG GDV+
Sbjct: 63 LALFEKLEVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRNHILILTGNGDVV 122
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPEN V AIGSGG +ALSAARALMS + +AEEIA K+M+IAAD+CV++NHNI++E +
Sbjct: 123 EPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEKV 181
>gi|332703814|ref|ZP_08423902.1| ATP-dependent protease hslV [Desulfovibrio africanus str. Walvis
Bay]
gi|332553963|gb|EGJ51007.1| ATP-dependent protease hslV [Desulfovibrio africanus str. Walvis
Bay]
Length = 178
Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats.
Identities = 106/178 (59%), Positives = 134/178 (75%), Gaps = 2/178 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
MHATTIL V D V +AGDGQV+LGQ TVMK ARKVRR+ K +I+ GFAGS+ADAFTL
Sbjct: 1 MHATTILAVLDDRGVAMAGDGQVTLGQQTVMKHTARKVRRIYKESILVGFAGSTADAFTL 60
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LER E KLEQ+ L R+SVELAK+WR DKYLR LEAM+L +D T L+++G GDV+EP+
Sbjct: 61 LERFEAKLEQFKGNLPRASVELAKEWRTDKYLRRLEAMLLASDGTQILLLSGNGDVIEPD 120
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+G+ AIGSGGSY +A T +A EI ++M+IAA+ICV+TN +V+ET+ G
Sbjct: 121 DGMAAIGSGGSYALAAARALKRHTGMAAREICERSMAIAAEICVFTNDKLVVETIDKG 178
>gi|283953974|ref|ZP_06371503.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 414]
gi|283794579|gb|EFC33319.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 414]
Length = 180
Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats.
Identities = 88/176 (50%), Positives = 122/176 (69%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L+ LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + AIGSGG+YALSAARAL T EE+ + ++ IA +IC+YTN NI ++
Sbjct: 122 GKIAAIGSGGNYALSAARALAKHTDLDEEELVKSSLQIAGEICIYTNTNIKTYVIE 177
>gi|255039358|ref|YP_003089979.1| ATP-dependent protease peptidase subunit [Dyadobacter fermentans
DSM 18053]
gi|254952114|gb|ACT96814.1| 20S proteasome A and B subunits [Dyadobacter fermentans DSM 18053]
Length = 180
Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats.
Identities = 100/176 (56%), Positives = 137/176 (77%), Gaps = 2/176 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+HATT+L V +G V + DGQ ++G TV K+N +K+R L G I+ GFAGS+ADAFTL
Sbjct: 3 KIHATTVLGVLHNGTVALGADGQATMGNTVAKSNVKKIRTLQGGKILVGFAGSTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E+KL Y + R+++ELAKDWR D+YLR LEAM++ A+K LVI+G GDVLEPE
Sbjct: 63 LDRFEEKLNGYGGNMKRAAIELAKDWRTDRYLRKLEAMMITANKDEILVISGTGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
NG+ +IGSGG++ALSAA+AL +T SAEE+ R+ ++IAAD+C+YTNHN+V+E +
Sbjct: 123 NGIASIGSGGNFALSAAQALKKHATHLSAEEMVREGLTIAADLCIYTNHNLVIEKV 178
>gi|116747517|ref|YP_844204.1| ATP-dependent protease peptidase subunit [Syntrophobacter
fumaroxidans MPOB]
gi|189036246|sp|A0LEB7|HSLV_SYNFM RecName: Full=ATP-dependent protease subunit HslV
gi|116696581|gb|ABK15769.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
family T01B [Syntrophobacter fumaroxidans MPOB]
Length = 179
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 98/173 (56%), Positives = 130/173 (75%), Gaps = 1/173 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT+L ++KDG VV+AGDGQV++G TV+K A+KVR++ I+ GF+GS+ADAFTL E
Sbjct: 7 HGTTVLAIKKDGKVVMAGDGQVTMGDTVVKHQAKKVRKMYHDRILTGFSGSTADAFTLFE 66
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLEQY L R++VELAKDWRMD+ LR LEA+++ AD+ +++G GDV+EP++G
Sbjct: 67 RLEGKLEQYNGNLKRAAVELAKDWRMDRALRRLEALLVAADRNDCFILSGTGDVIEPDDG 126
Query: 134 VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ A+GSG YAL+AARAL T S EIA +AM+IAA IC+YTN E L
Sbjct: 127 LAAVGSGAPYALAAARALIRHTGMSIREIAEEAMNIAASICIYTNREFTFEEL 179
>gi|330807098|ref|YP_004351560.1| ATP-dependent protease, peptidase subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327375206|gb|AEA66556.1| ATP-dependent protease, peptidase subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 176
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 93/175 (53%), Positives = 126/175 (72%), Gaps = 1/175 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E +LE++ L+R++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++
Sbjct: 62 EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121
Query: 136 AI-GSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
A+ G +A+ L T SA EI A+ IA DICV+TNH +E + +
Sbjct: 122 AMGSGGAYAQAAASALLKKTDLSAREIVETALGIAGDICVFTNHTQTIEEQDLAE 176
>gi|15604187|ref|NP_220702.1| ATP-dependent protease peptidase subunit [Rickettsia prowazekii
str. Madrid E]
gi|11133247|sp|Q9ZDK9|HSLV_RICPR RecName: Full=ATP-dependent protease subunit HslV
gi|3860879|emb|CAA14779.1| HEAT SHOCK PROTEIN HSLV (hslV) [Rickettsia prowazekii]
gi|292571920|gb|ADE29835.1| Heat shock protein HslV [Rickettsia prowazekii Rp22]
Length = 182
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 106/175 (60%), Positives = 139/175 (79%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TTIL ++K ++IA DGQVS G TV+K+ ARK+R + II GFAGS+AD L
Sbjct: 7 LHGTTILCLKKKEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIVGFAGSTADGLALF 66
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+LE K+EQY + LLRS+VELAKDWR DKYLR LEAM+++AD++ L++TG GDV+EPEN
Sbjct: 67 EKLEIKIEQYNSNLLRSAVELAKDWRNDKYLRRLEAMMIVADRSHILILTGNGDVIEPEN 126
Query: 133 GVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSGG +ALSAARALMS + +AEEIA K+M+IAAD+CV++NHNI++E +
Sbjct: 127 NVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEKV 181
>gi|124002741|ref|ZP_01687593.1| ATP-dependent protease HslV [Microscilla marina ATCC 23134]
gi|123991969|gb|EAY31356.1| ATP-dependent protease HslV [Microscilla marina ATCC 23134]
Length = 178
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 103/176 (58%), Positives = 136/176 (77%), Gaps = 2/176 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+HATT+L + +G V I DGQ ++G TV K+N RK+R+L GNI+AGFAGS+ADAFTL
Sbjct: 3 KIHATTVLAIVHNGEVAIGADGQATMGNTVAKSNVRKIRKLSDGNILAGFAGSTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ER ++KL Y + R+++ELAKDWR D+YLR LEAM++ A K LVI+G GDVLEP+
Sbjct: 63 IERFDEKLNAYGKNMKRAAIELAKDWRTDRYLRRLEAMLITASKDEVLVISGTGDVLEPD 122
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
NG+ +IGSG YA SAA AL STQ +AEE+ ++++ IAADIC+YTNHNI+LE L
Sbjct: 123 NGIASIGSGSMYAQSAATALKKHSTQMTAEEMVKESLHIAADICIYTNHNIILEKL 178
>gi|114776987|ref|ZP_01452007.1| 20S proteasome, A and B subunits [Mariprofundus ferrooxydans PV-1]
gi|114552508|gb|EAU54968.1| 20S proteasome, A and B subunits [Mariprofundus ferrooxydans PV-1]
Length = 185
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 98/182 (53%), Positives = 133/182 (73%), Gaps = 1/182 (0%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ M TTI VRK+ V I GDGQV+LG TV+K RKVR + G I+ GFAGS+ADA
Sbjct: 3 GISMRGTTICCVRKNSEVAIGGDGQVTLGDTVVKHGGRKVRSIRNGAILTGFAGSTADAM 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L ER E KL+++ L+R++V LAK+WR DKYLR LEAM+++AD TL+I+G GDVLE
Sbjct: 63 NLFERFEAKLDEHGGSLMRAAVGLAKEWRTDKYLRQLEAMMIVADADNTLIISGNGDVLE 122
Query: 130 PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
P++GV AIGSGG+YA +AA AL+ + A +IAR+AM IAA+IC+YTN NI ++++
Sbjct: 123 PDDGVAAIGSGGAYAKAAATALVHHSELKASDIAREAMLIAANICIYTNSNITIKSIPEE 182
Query: 189 DE 190
++
Sbjct: 183 NQ 184
>gi|15892356|ref|NP_360070.1| ATP-dependent protease peptidase subunit [Rickettsia conorii str.
Malish 7]
gi|34580639|ref|ZP_00142119.1| heat shock protein HslV [Rickettsia sibirica 246]
gi|157828308|ref|YP_001494550.1| ATP-dependent protease peptidase subunit [Rickettsia rickettsii
str. 'Sheila Smith']
gi|165933014|ref|YP_001649803.1| ATP-dependent protease subunit HslV [Rickettsia rickettsii str.
Iowa]
gi|229586581|ref|YP_002845082.1| ATP-dependent protease peptidase subunit [Rickettsia africae ESF-5]
gi|21759187|sp|Q92II7|HSLV_RICCN RecName: Full=ATP-dependent protease subunit HslV
gi|166222996|sp|A8GRL7|HSLV_RICRS RecName: Full=ATP-dependent protease subunit HslV
gi|189036235|sp|B0BX21|HSLV_RICRO RecName: Full=ATP-dependent protease subunit HslV
gi|259491396|sp|C3PN29|HSLV_RICAE RecName: Full=ATP-dependent protease subunit HslV
gi|15619503|gb|AAL02971.1| heat shock protein HslV [Rickettsia conorii str. Malish 7]
gi|28262024|gb|EAA25528.1| heat shock protein HslV [Rickettsia sibirica 246]
gi|157800789|gb|ABV76042.1| ATP-dependent protease peptidase subunit [Rickettsia rickettsii
str. 'Sheila Smith']
gi|165908101|gb|ABY72397.1| ATP-dependent endopeptidase hsl proteolytic subunit [Rickettsia
rickettsii str. Iowa]
gi|228021631|gb|ACP53339.1| Heat shock protein HslV [Rickettsia africae ESF-5]
Length = 182
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 105/179 (58%), Positives = 141/179 (78%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ +H TTIL ++K+ ++IA DGQVS G TV+K+ ARK+R + IIAGFAGS+AD
Sbjct: 3 DNLSLHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTADG 62
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
L E+L K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD++ L++TG GDV+
Sbjct: 63 LALFEKLAVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGDVV 122
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPEN V AIGSGG +ALSAARALMS + +AEEIA K+M+IAAD+CV++NHNI++E +
Sbjct: 123 EPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEKV 181
>gi|88606825|ref|YP_505626.1| ATP-dependent protease peptidase subunit [Anaplasma phagocytophilum
HZ]
gi|123494508|sp|Q2GJ25|HSLV_ANAPZ RecName: Full=ATP-dependent protease subunit HslV
gi|88597888|gb|ABD43358.1| ATP-dependent protease HslV [Anaplasma phagocytophilum HZ]
Length = 189
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 110/187 (58%), Positives = 147/187 (78%), Gaps = 6/187 (3%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D KM+ TTIL++R+ V++AGDGQV+LG T+MK +ARK++RL +I GFAG++
Sbjct: 2 DHTDDRKMYGTTILSIRRGNSVIVAGDGQVTLGSTIMKTSARKIKRLASNTVITGFAGAT 61
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAFTL ERLE KLE++P QL+R+ VELAKDWR DKYLR LEAM+++ADK+++LVI+G G
Sbjct: 62 ADAFTLFERLEGKLEKHPGQLMRACVELAKDWRQDKYLRRLEAMMIVADKSVSLVISGGG 121
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQ------NSAEEIARKAMSIAADICVYTNHN 179
DVLEPENG+ AIGSGG+ AL+AARAL + Q E I K+M+IAA+IC+YTN+N
Sbjct: 122 DVLEPENGIAAIGSGGNLALAAARALCAAQDEFAPAMPLEYIVAKSMAIAAEICIYTNNN 181
Query: 180 IVLETLK 186
IV+E ++
Sbjct: 182 IVMEKIE 188
>gi|239947567|ref|ZP_04699320.1| ATP-dependent protease HslVU, peptidase subunit [Rickettsia
endosymbiont of Ixodes scapularis]
gi|239921843|gb|EER21867.1| ATP-dependent protease HslVU, peptidase subunit [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 182
Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats.
Identities = 105/179 (58%), Positives = 142/179 (79%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ +H TTIL ++K+ ++IA DGQVS G TV+K+ ARK+R + IIAGFAGS+AD
Sbjct: 3 DNLALHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTADG 62
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
L E+LE ++EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD++ L++TG GDV+
Sbjct: 63 LALFEKLEVRIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGDVV 122
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPEN V AIGSGG +ALSAARALMS + +AEEIA K+M+IAAD+CV++NHNI++E +
Sbjct: 123 EPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEKV 181
>gi|225181364|ref|ZP_03734808.1| 20S proteasome A and B subunits [Dethiobacter alkaliphilus AHT 1]
gi|225167945|gb|EEG76752.1| 20S proteasome A and B subunits [Dethiobacter alkaliphilus AHT 1]
Length = 176
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 95/175 (54%), Positives = 126/175 (72%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
H TTI+ V K+G +AGDGQV+ G TVMK A KVR + +G ++AGFAGS ADA TL
Sbjct: 2 FHGTTIVAVLKNGRCALAGDGQVTFGGNTVMKHQAIKVRPIYQGKVLAGFAGSVADAVTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E++LE+Y L R++VELAK+WRMD+ LR LEA++L+AD LVI+G G+++EP+
Sbjct: 62 FEKYEEQLEKYQGNLRRAAVELAKEWRMDRVLRRLEALLLVADTESLLVISGNGELIEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+GV AIGSGG Y +A T A E+AR+A+ IA +ICVYTN +IVLETL
Sbjct: 122 DGVTAIGSGGPYALAAARALHRHTDLDAGEVARQALLIAGEICVYTNDSIVLETL 176
>gi|238921644|ref|YP_002935159.1| ATP-dependent protease peptidase subunit [Edwardsiella ictaluri
93-146]
gi|238871213|gb|ACR70924.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 163
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 90/159 (56%), Positives = 118/159 (74%), Gaps = 1/159 (0%)
Query: 29 IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
I GDGQ +LG TVMK N RKVRRL +IAGFAG +ADAFTL E E+KLE + L++
Sbjct: 2 IGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELFERKLELHQGHLVK 61
Query: 89 SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA 148
++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSGG YA +AA
Sbjct: 62 AAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQAAA 121
Query: 149 RALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
RAL+ +T+ A +I KA+ IA DIC+YTN +E L
Sbjct: 122 RALLENTELGAHDIVEKALGIAGDICIYTNQFHTIEELD 160
>gi|312879577|ref|ZP_07739377.1| 20S proteasome A and B subunits [Aminomonas paucivorans DSM 12260]
gi|310782868|gb|EFQ23266.1| 20S proteasome A and B subunits [Aminomonas paucivorans DSM 12260]
Length = 177
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 102/174 (58%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL VRKDG V +AGDGQV+LG ++KA ARKVRRL +G I+AGFAGS+ADA TLL
Sbjct: 2 FKGTTILCVRKDGRVAMAGDGQVTLGSQIVKAGARKVRRLHEGQILAGFAGSTADAMTLL 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER EK+LE+ LLRS+ L K+WR DK LR LEAM+L+AD+ TL+++G GD+LEPE
Sbjct: 62 ERFEKRLEENQGHLLRSAAALVKEWRTDKALRRLEAMLLVADREQTLLLSGAGDILEPEG 121
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV +IGSG YAL+AAR L+ + +A IAR+++ +A++IC+YTN I LE L
Sbjct: 122 GVASIGSGSGYALAAARGLLEGSDWAAGAIARRSLELASEICIYTNDQITLEEL 175
>gi|302389651|ref|YP_003825472.1| ATP dependent peptidase CodWX, CodW component [Thermosediminibacter
oceani DSM 16646]
gi|302200279|gb|ADL07849.1| ATP dependent peptidase CodWX, CodW component [Thermosediminibacter
oceani DSM 16646]
Length = 176
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 93/175 (53%), Positives = 127/175 (72%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
ATTI+ V IAGDGQV+ G T+MK +A+K+R++ G ++AGFAGS ADA TL
Sbjct: 2 FSATTIVAVVNKKGAAIAGDGQVTFGENTIMKHHAKKIRKIYNGRVLAGFAGSVADAVTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE++ L+R++VELAK+WR D+ LR LEA+++ AD+ L+I+G G+V+EP+
Sbjct: 62 FEKFEGKLEEFHGNLVRAAVELAKEWRTDRMLRKLEALLIAADREHILIISGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G+ AIGSGG YAL+AARAL T AE+I +A+ IAADICVYTN I +E L
Sbjct: 122 DGIAAIGSGGPYALAAARALARFTDLPAEKIVEEALKIAADICVYTNDFISVEAL 176
>gi|78186792|ref|YP_374835.1| ATP-dependent protease peptidase subunit [Chlorobium luteolum DSM
273]
gi|123583124|sp|Q3B4D9|HSLV_PELLD RecName: Full=ATP-dependent protease subunit HslV
gi|78166694|gb|ABB23792.1| heat shock protein HslV [Chlorobium luteolum DSM 273]
Length = 182
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 92/174 (52%), Positives = 133/174 (76%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ +TT++ V +DG + DGQ++LG TV+K + RK+R L +G ++AGFAG++ADA TLL
Sbjct: 9 IRSTTVIGVLRDGKAALGSDGQMTLGNTVVKHSTRKIRSLYQGRLLAGFAGATADAITLL 68
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+R E+KLE Y +L R++VELA+DWR DKYLR LEAM+ I L+I+G GDV+EPE+
Sbjct: 69 DRFEEKLEAYNGKLERAAVELARDWRTDKYLRRLEAMLAIVSSERALIISGTGDVIEPED 128
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSG YAL+AAR+LM T SA +I R+++ AA+IC+YTN++IV+E +
Sbjct: 129 GIVAIGSGSMYALAAARSLMKHTGLSARDIVRESLETAAEICIYTNNHIVVEEV 182
>gi|258511366|ref|YP_003184800.1| ATP-dependent protease peptidase subunit [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478092|gb|ACV58411.1| 20S proteasome A and B subunits [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 181
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 93/178 (52%), Positives = 126/178 (70%), Gaps = 2/178 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+MH TTI + +DG +AGDGQV+ G VMK +ARKVRRL ++AGFAGS ADAFT
Sbjct: 4 EMHGTTIFAMLRDGRGAMAGDGQVTFGNSMVMKHSARKVRRLYHDRVVAGFAGSVADAFT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ER EKKLE++ L R++VELAK WR DK L+ LEAM+++ D L+++G G+V++P
Sbjct: 64 LFERFEKKLEEFQGNLPRAAVELAKAWRSDKILQKLEAMLVVMDARDLLIVSGGGEVIQP 123
Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
++G+ AIGSGG Y + +TQ EIA++A+ IA++ICVYTN IVLET+ V
Sbjct: 124 DDGICAIGSGGGYALAAGRALARNTQLEPAEIAKQALIIASEICVYTNDQIVLETVGV 181
>gi|84684627|ref|ZP_01012528.1| ATP-dependent protease peptidase subunit [Maritimibacter
alkaliphilus HTCC2654]
gi|84667606|gb|EAQ14075.1| ATP-dependent protease peptidase subunit [Rhodobacterales bacterium
HTCC2654]
Length = 183
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 124/179 (69%), Positives = 140/179 (78%), Gaps = 2/179 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADA 68
H TTI VRK G VVIAGDGQVSLG TV+K ARKVRRL G +IIAGFAGS+ADA
Sbjct: 5 PGWHGTTICGVRKGGEVVIAGDGQVSLGDTVIKGTARKVRRLSPGGYDIIAGFAGSTADA 64
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTLLERLE KLE P QL R+ VELAKDWR DKYL+ LEAM++++D V+TG GDVL
Sbjct: 65 FTLLERLETKLEATPGQLARACVELAKDWRTDKYLQKLEAMLIVSDGKDLFVVTGAGDVL 124
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
EPE+ V AIGSGG+YAL+A RA+M T SAEEIAR AM+IAADICVYTN N+ LETLK
Sbjct: 125 EPEHDVAAIGSGGNYALAAGRAMMDTDKSAEEIARAAMAIAADICVYTNGNLTLETLKT 183
>gi|85705742|ref|ZP_01036839.1| ATP-dependent protease peptidase subunit [Roseovarius sp. 217]
gi|85669732|gb|EAQ24596.1| ATP-dependent protease peptidase subunit [Roseovarius sp. 217]
Length = 184
Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats.
Identities = 115/179 (64%), Positives = 138/179 (77%), Gaps = 3/179 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADA 68
H TTI+ VR+ G VV+AGDGQVSLGQTV+K ARKVRRL G ++AGFAGS+ADA
Sbjct: 5 PGWHGTTIIGVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHPVVAGFAGSTADA 64
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTLLERLE KLE P QL R+ VELAKDWR DKYL+ LEAM+++ D VITG GDVL
Sbjct: 65 FTLLERLETKLEATPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGDQLYVITGAGDVL 124
Query: 129 EPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
EPE+ V AIGSGG++AL+AAR L + +AEEIAR+AM+IAADICVYTN N+ +E +
Sbjct: 125 EPEHDVAAIGSGGNFALAAARGLAENPSLTAEEIARRAMAIAADICVYTNGNLTVERIS 183
>gi|157825562|ref|YP_001493282.1| ATP-dependent protease peptidase subunit [Rickettsia akari str.
Hartford]
gi|166222993|sp|A8GMZ9|HSLV_RICAH RecName: Full=ATP-dependent protease subunit HslV
gi|157799520|gb|ABV74774.1| ATP-dependent protease peptidase subunit [Rickettsia akari str.
Hartford]
Length = 182
Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats.
Identities = 105/179 (58%), Positives = 141/179 (78%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ +H TTIL ++K+ ++IA DGQVS G TV+K+ ARK+R + IIAGFAGS+AD
Sbjct: 3 DNLALHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTADG 62
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
L E+LE K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++ D++ L++TG GDV+
Sbjct: 63 LALFEKLEVKIEQHKHNLLRSAVELAKDWRNDKYLRRLEAMMIVGDRSHILILTGNGDVV 122
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPEN V AIGSGG +ALSAARALMS + +AEEIA K+M+IAAD+CV++NHNI++E +
Sbjct: 123 EPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEKV 181
>gi|254456381|ref|ZP_05069810.1| ATP-dependent protease [Candidatus Pelagibacter sp. HTCC7211]
gi|207083383|gb|EDZ60809.1| ATP-dependent protease [Candidatus Pelagibacter sp. HTCC7211]
Length = 171
Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats.
Identities = 98/170 (57%), Positives = 134/170 (78%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRK+ VV+AGDGQVS+G TV+K+ A KVR++ K +++AGFAGS+ADA TL ERL
Sbjct: 2 TTIVLVRKNNEVVVAGDGQVSMGNTVVKSTASKVRKIEKRDVVAGFAGSTADALTLFERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E K+E++ L R++VELAKDWR DKYLR LEA++ I DK + +I+G GDVLEPE V+
Sbjct: 62 EAKIEKHAGNLSRAAVELAKDWRTDKYLRRLEALMAIGDKENSYIISGTGDVLEPEGDVI 121
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
IGSGG+YAL+A + L+ T SAEE+A+KA+ +A++ICV+TN NI + +
Sbjct: 122 GIGSGGNYALAAGKVLIETDMSAEEVAKKAIKVASEICVFTNDNIKVLKI 171
>gi|239994472|ref|ZP_04714996.1| ATP-dependent protease peptidase subunit [Alteromonas macleodii
ATCC 27126]
Length = 160
Score = 261 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 95/159 (59%), Positives = 125/159 (78%), Gaps = 1/159 (0%)
Query: 29 IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
+AGDGQVSLG TVMK NARKVRRL I+AGFAG +ADAFTL ER E KLE + L +
Sbjct: 1 MAGDGQVSLGNTVMKGNARKVRRLYHDKILAGFAGGTADAFTLFERFEAKLEAHQGHLTK 60
Query: 89 SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA 148
++VELAKDWR D+ LR LEA++ +AD+T + +ITG GDV++PE ++AIGSGG+YA +AA
Sbjct: 61 AAVELAKDWRTDRALRKLEALLAVADETASFIITGNGDVVQPEQDLIAIGSGGNYAQAAA 120
Query: 149 RALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AL+ +T+ SA+EIA KA++IA DICV+TNH+ ++ L
Sbjct: 121 TALLENTELSAKEIAEKALTIAGDICVFTNHSQTVDVLD 159
>gi|224373290|ref|YP_002607662.1| ATP-dependent protease peptidase subunit [Nautilia profundicola
AmH]
gi|223589415|gb|ACM93151.1| peptidase, T1 family [Nautilia profundicola AmH]
Length = 182
Score = 261 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 93/180 (51%), Positives = 129/180 (71%), Gaps = 2/180 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ M ATTIL +KDGV VI GDGQV+ G TV+K NA K+R L G ++AGFAGS+ADAF
Sbjct: 3 INMEATTILGYKKDGVAVIGGDGQVTFGHTVLKGNATKIRTLYNGKVLAGFAGSTADAFI 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L + EK LE L++S ++ K WR DKYLR LEAM+++ ++ +++G GDV+EP
Sbjct: 63 LFDMFEKNLENRKGDLVKSVIDFGKAWRQDKYLRRLEAMMIVLNQKHIFILSGNGDVVEP 122
Query: 131 ENG-VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
E+G + AIGSGG+YA+SAARAL+ S EE+ ++++ IAAD+C+YTNHNI + L+
Sbjct: 123 EDGELAAIGSGGNYAISAARALVKHSNLSPEELVKESLHIAADLCIYTNHNIKILKLEKE 182
>gi|315639033|ref|ZP_07894203.1| ATP-dependent protease HslVU [Campylobacter upsaliensis JV21]
gi|315480945|gb|EFU71579.1| ATP-dependent protease HslVU [Campylobacter upsaliensis JV21]
Length = 181
Score = 261 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 90/177 (50%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVSLG TVMK NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSLGNTVMKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L+ LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDVLEPE+
Sbjct: 62 DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRKHIFLLSGTGDVLEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ AIGSGG+YALSAARAL EE+ + ++ IA +ICVYTN NI ++
Sbjct: 122 NQIAAIGSGGNYALSAARALKKHAQNLDEEELVKSSLQIAGEICVYTNTNIKTYVIE 178
>gi|257457893|ref|ZP_05623052.1| ATP-dependent protease HslVU, peptidase subunit [Treponema
vincentii ATCC 35580]
gi|257444606|gb|EEV19690.1| ATP-dependent protease HslVU, peptidase subunit [Treponema
vincentii ATCC 35580]
Length = 179
Score = 261 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 92/178 (51%), Positives = 134/178 (75%), Gaps = 1/178 (0%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
K+ +TT++ V+++G V +AGDGQV++G+TVMK NARKVR++ G ++ GFAG++ADA
Sbjct: 2 GKTKVRSTTVIAVKRNGKVAMAGDGQVTMGETVMKGNARKVRKIYDGKVMTGFAGATADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTLLE+ E +L++Y + R++VELAK+WR DK L+NLEA++L+AD L+I+G GDV+
Sbjct: 62 FTLLEKFEGRLKEYSGDITRAAVELAKEWRTDKMLKNLEALLLVADAKTILLISGNGDVI 121
Query: 129 EPENGVMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EP+ V+AIGSGG+ +A L +T SA EIA K++SIA ICVYTN N+ +E +
Sbjct: 122 EPQEEVLAIGSGGNYAYAAALALLRNTDLSAREIAEKSLSIAGQICVYTNENVHIEEI 179
>gi|159901850|gb|ABX10585.1| ATP-dependent protease [uncultured planctomycete 5H12]
Length = 206
Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats.
Identities = 96/185 (51%), Positives = 133/185 (71%), Gaps = 1/185 (0%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D +K+HATTILTV G V + GDGQV+LG VMK +A K+R+L G ++ GFAGSS
Sbjct: 22 DWKQKMKIHATTILTVEHQGSVAMGGDGQVTLGNAVMKTDAMKIRKLLGGRVLCGFAGSS 81
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAF LLER E++L+ P + R++ ELA+ WR DK LR LEA++ + D TL+I+G G
Sbjct: 82 ADAFALLERFEEQLKDSPENIPRAATELARQWRTDKALRQLEALLTVTDGKNTLLISGTG 141
Query: 126 DVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
DV++P +GV+ IGSGG+YA++AARAL +Q SA EI +++ IA I +YTN NI++ET
Sbjct: 142 DVIQPTDGVVGIGSGGNYAIAAARALKEHSQLSASEIVVESLKIAGGIDIYTNTNIIVET 201
Query: 185 LKVGD 189
L + +
Sbjct: 202 LGLME 206
>gi|62263520|gb|AAX78168.1| unknown protein [synthetic construct]
Length = 218
Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats.
Identities = 93/176 (52%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTIL VRK VVI GDGQ +LG T+ K N KVR+L G ++ GFAGS+ADAFTL
Sbjct: 30 IKGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 89
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
E+ E+KLE Y L R++VE+ ++WR+D+ L LEAMI++A++ ++L+I+G GDV+ +
Sbjct: 90 EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVANEKLSLLISGAGDVMAADK 149
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N +++IGSG +YA SAA AL+ +T SAEEI RK+++IAAD C+YTNHN +E+L+
Sbjct: 150 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 205
>gi|285019334|ref|YP_003377045.1| peptidase component of the hsluv protease [Xanthomonas albilineans
GPE PC73]
gi|283474552|emb|CBA17053.1| probable peptidase component of the hsluv protease protein
[Xanthomonas albilineans]
Length = 183
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 111/184 (60%), Positives = 141/184 (76%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M HATTIL+VR+DG V +AGDGQV+LG TVMK NARKVRRLG G ++AGFA
Sbjct: 1 MDPSQNPHVFHATTILSVRRDGRVAVAGDGQVTLGHTVMKGNARKVRRLGRDGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KLE+Y QL R++VELAKDWR ++ L LEA++ +AD+ +L+I
Sbjct: 61 GAAADAFTLFELFEAKLEKY-GQLTRAAVELAKDWRTERRLGKLEALLAVADQETSLIIG 119
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGGSYALSAARAL+ T A IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLGHTSLDARTIAVEALNIAGDICIYTNRNVV 179
Query: 182 LETL 185
+E L
Sbjct: 180 VEEL 183
>gi|238650767|ref|YP_002916622.1| ATP-dependent protease peptidase subunit [Rickettsia peacockii str.
Rustic]
gi|259491397|sp|C4K1X3|HSLV_RICPU RecName: Full=ATP-dependent protease subunit HslV
gi|238624865|gb|ACR47571.1| ATP-dependent protease peptidase subunit [Rickettsia peacockii str.
Rustic]
Length = 182
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 104/179 (58%), Positives = 140/179 (78%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ +H TTIL ++K+ ++IA DGQVS G TV+K+ ARK+R + IIAGFAGS+AD
Sbjct: 3 DNLSLHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTADG 62
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
L E+L K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD++ L++TG GDV+
Sbjct: 63 LALFEKLAVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGDVV 122
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPE V AIGSGG +ALSAARALMS + +AEEIA K+M+IAAD+CV++NHNI++E +
Sbjct: 123 EPEKNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEKV 181
>gi|86151772|ref|ZP_01069986.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 260.94]
gi|86153408|ref|ZP_01071612.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121613396|ref|YP_001000363.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
subsp. jejuni 81-176]
gi|157414939|ref|YP_001482195.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
subsp. jejuni 81116]
gi|167005309|ref|ZP_02271067.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
81-176]
gi|315124172|ref|YP_004066176.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|166221636|sp|A1VZ22|HSLV_CAMJJ RecName: Full=ATP-dependent protease subunit HslV
gi|172047096|sp|A8FL81|HSLV_CAMJ8 RecName: Full=ATP-dependent protease subunit HslV
gi|85841401|gb|EAQ58649.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 260.94]
gi|85843134|gb|EAQ60345.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87249439|gb|EAQ72399.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 81-176]
gi|157385903|gb|ABV52218.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
81116]
gi|284925921|gb|ADC28273.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
subsp. jejuni IA3902]
gi|307747578|gb|ADN90848.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni M1]
gi|315017894|gb|ADT65987.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|315931860|gb|EFV10815.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni
327]
Length = 180
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 87/176 (49%), Positives = 121/176 (68%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L+ LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + AIGSGG+YALSAARAL EE+ + ++ IA +IC+YTN NI ++
Sbjct: 122 GQIAAIGSGGNYALSAARALAKHASLDEEELVKSSLQIAGEICIYTNTNIKTYVIE 177
>gi|145568945|gb|ABP78051.1| heat shock protein HslV [Pseudomonas stutzeri A1501]
Length = 172
Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats.
Identities = 90/170 (52%), Positives = 123/170 (72%), Gaps = 3/170 (1%)
Query: 22 RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
R++G VV+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER E +LE+
Sbjct: 2 RRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERFEGQLEK 61
Query: 82 YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
+ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV++PE+ ++A+GSGG
Sbjct: 62 HQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVQPEDDLIAMGSGG 121
Query: 142 SY---ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+ A A SA+EIA A++IA ICV+TN N+ +E L
Sbjct: 122 GFAQAAAKALLLKAGADMSAQEIAETALNIAGSICVFTNQNLTIEELDSA 171
>gi|172057894|ref|YP_001814354.1| ATP-dependent protease peptidase subunit [Exiguobacterium sibiricum
255-15]
gi|171990415|gb|ACB61337.1| 20S proteasome A and B subunits [Exiguobacterium sibiricum 255-15]
Length = 183
Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats.
Identities = 95/176 (53%), Positives = 130/176 (73%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI ++ +G ++GDGQV+ G V MK +A+KVRRL G +IAGFAGS ADAFTL
Sbjct: 2 FHATTIFAIQHNGQSAMSGDGQVTFGNQVIMKKSAKKVRRLYGGKVIAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE Y L R++VELAK+WR DK LR LEA++L+ D T L+++G G+V+EP+
Sbjct: 62 FEKFEAKLEMYNGNLQRAAVELAKEWRGDKMLRQLEALLLVMDGTHLLLVSGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGG+YAL+A RAL +AE+IAR A+ A ++CV+TN I+LET+
Sbjct: 122 DGILAIGSGGNYALAAGRALARHAGHMTAEQIARAALETAGELCVFTNDQIILETI 177
>gi|269836346|ref|YP_003318574.1| 20S proteasome A and B subunits [Sphaerobacter thermophilus DSM
20745]
gi|269785609|gb|ACZ37752.1| 20S proteasome A and B subunits [Sphaerobacter thermophilus DSM
20745]
Length = 190
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 93/185 (50%), Positives = 126/185 (68%), Gaps = 1/185 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
++ + + HATTIL V++DG V +AGDGQV+ G VMK ARK+R L G ++AGFAG+ A
Sbjct: 2 QNQSTRWHATTILGVQRDGDVALAGDGQVTYGDVVMKHGARKIRTLLDGQVVAGFAGAVA 61
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DA TL E+ E L + L R++VELAK+WR D+YLR LEA +++AD LVI+G GD
Sbjct: 62 DALTLFEKFETHLRDWDGNLRRAAVELAKEWRTDRYLRRLEAQLIVADGDSLLVISGEGD 121
Query: 127 VLEPENGVMAIGSG-GSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+EP++GV AIG+G +A L T A EIA AM + AD+C+YTN +IV+ET
Sbjct: 122 VIEPDDGVAAIGTGAPYATAAARALLQHTDMPAREIAEAAMRVTADLCIYTNDHIVIETT 181
Query: 186 KVGDE 190
+ DE
Sbjct: 182 RRQDE 186
>gi|57167684|ref|ZP_00366824.1| heat shock protein [Campylobacter coli RM2228]
gi|283956077|ref|ZP_06373564.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 1336]
gi|305433191|ref|ZP_07402347.1| ATP-dependent protease HslVU [Campylobacter coli JV20]
gi|57020806|gb|EAL57470.1| heat shock protein [Campylobacter coli RM2228]
gi|283792397|gb|EFC31179.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. jejuni 1336]
gi|304443892|gb|EFM36549.1| ATP-dependent protease HslVU [Campylobacter coli JV20]
Length = 180
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 87/176 (49%), Positives = 121/176 (68%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L+ LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + AIGSGG+YALSAARAL EE+ + ++ IA +IC+YTN NI ++
Sbjct: 122 GQIAAIGSGGNYALSAARALAKHANLDEEELVKSSLQIAGEICIYTNTNIKTYVIE 177
>gi|328675858|gb|AEB28533.1| ATP-dependent protease HslV [Francisella cf. novicida 3523]
Length = 183
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 95/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTIL VRK VVI GDGQ +LG TV K N KVR+L G ++ GFAGS+ADAFTL
Sbjct: 4 IKGTTILCVRKGDKVVIGGDGQATLGHTVAKDNIVKVRKLNNGKVLTGFAGSTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
E+ E+KLE Y L R++VE+ ++WR+D+ L LEAMI++AD+ ++L+I+G GDV+ +
Sbjct: 64 EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIVVADEKLSLLISGAGDVMAADK 123
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N +++IGSG +YA SAA AL+ +T SAEEI RK+++IAAD C+YTNHN +E+L+
Sbjct: 124 NDIISIGSGSTYARSAATALIENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 179
>gi|78357167|ref|YP_388616.1| ATP-dependent protease peptidase subunit [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
gi|123552215|sp|Q30ZH5|HSLV_DESDG RecName: Full=ATP-dependent protease subunit HslV
gi|78219572|gb|ABB38921.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 180
Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats.
Identities = 100/175 (57%), Positives = 130/175 (74%), Gaps = 2/175 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ + TTIL V+ D V +AGDGQV+LGQ VMK ARKVRR+ K IIAGFAGS+ADAF
Sbjct: 1 MDLKGTTILAVKDDEGVSMAGDGQVTLGQAIVMKHGARKVRRIYKDRIIAGFAGSTADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL ER E KLE++ LLR+SVE+AKDWR DK+LR LEAM+L++D T L+++G GDV+E
Sbjct: 61 TLFERFEAKLEEFGGNLLRASVEMAKDWRKDKFLRRLEAMLLVSDGTTLLMLSGTGDVIE 120
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
P++GV AIGSGG Y +A T SA+EI KAM+IA ++CV+TN ++ +E
Sbjct: 121 PDDGVAAIGSGGPYALAAARALQRHTALSAQEIVTKAMAIAGELCVFTNDHLTVE 175
>gi|57242465|ref|ZP_00370403.1| heat shock protein [Campylobacter upsaliensis RM3195]
gi|57016750|gb|EAL53533.1| heat shock protein [Campylobacter upsaliensis RM3195]
Length = 181
Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats.
Identities = 89/177 (50%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVSLG T+MK NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSLGNTIMKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L+ LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDVLEPE+
Sbjct: 62 DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRKHIFLLSGTGDVLEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ AIGSGG+YALSAARAL EE+ + ++ IA +ICVYTN NI ++
Sbjct: 122 NQIAAIGSGGNYALSAARALKKHALNLDEEELVKSSLQIAGEICVYTNTNIKTYVIE 178
>gi|86159116|ref|YP_465901.1| ATP-dependent protease peptidase subunit [Anaeromyxobacter
dehalogenans 2CP-C]
gi|123498717|sp|Q2ILD4|HSLV_ANADE RecName: Full=ATP-dependent protease subunit HslV
gi|85775627|gb|ABC82464.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Anaeromyxobacter dehalogenans 2CP-C]
Length = 181
Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats.
Identities = 95/179 (53%), Positives = 130/179 (72%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
MH TT+L VR++G VVIAGDGQV+L +TVMKA ARKVRRLG+G ++AGFAG++ADAF L
Sbjct: 3 PMHGTTVLCVRREGRVVIAGDGQVTLDKTVMKATARKVRRLGEGQVVAGFAGATADAFQL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E EKKL+++ L R++VELAK WR D+ LR LEA++++AD+ LV++G GDV+EP+
Sbjct: 63 FELFEKKLKEHARSLPRAAVELAKQWRTDRMLRRLEALLVVADREHVLVLSGAGDVIEPD 122
Query: 132 N----GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG Y +A L + A +A +AM +AA+IC+YTN N+ +E L
Sbjct: 123 PVANGAAVAIGSGGPYALAAARALLAHSSLDARRVAEEAMKLAAEICIYTNGNLTIEEL 181
>gi|153005548|ref|YP_001379873.1| ATP-dependent protease peptidase subunit [Anaeromyxobacter sp.
Fw109-5]
gi|189043928|sp|A7HDU3|HSLV_ANADF RecName: Full=ATP-dependent protease subunit HslV
gi|152029121|gb|ABS26889.1| 20S proteasome A and B subunits [Anaeromyxobacter sp. Fw109-5]
Length = 181
Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats.
Identities = 97/179 (54%), Positives = 134/179 (74%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
H TT+L VR+DG VV+A DGQV+L +TVMK+ ARKVRRL +G ++AGFAG++ADAF L
Sbjct: 3 PFHGTTVLCVRRDGKVVMASDGQVTLDKTVMKSTARKVRRLAEGAVLAGFAGATADAFQL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E EKKL+++ L R++VELAK WR D+ LR LEAM+++AD+ LV++G GDV+EP+
Sbjct: 63 FELFEKKLKEHARSLPRAAVELAKQWRTDRMLRRLEAMLVVADREHILVLSGAGDVIEPD 122
Query: 132 N----GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV+AIGSG YA++AARAL+ + A ++A +AM +AA+IC+YTN N+ E L
Sbjct: 123 PVPGGGVVAIGSGAPYAVAAARALLGHSALPARQVAEEAMKLAAEICIYTNANLTFEEL 181
>gi|190575907|ref|YP_001973752.1| ATP-dependent protease peptidase subunit [Stenotrophomonas
maltophilia K279a]
gi|194367244|ref|YP_002029854.1| ATP-dependent protease peptidase subunit [Stenotrophomonas
maltophilia R551-3]
gi|254521094|ref|ZP_05133149.1| ATP-dependent protease HslV [Stenotrophomonas sp. SKA14]
gi|229486364|sp|B2FUV7|HSLV_STRMK RecName: Full=ATP-dependent protease subunit HslV
gi|238065942|sp|B4SJN0|HSLV_STRM5 RecName: Full=ATP-dependent protease subunit HslV
gi|190013829|emb|CAQ47467.1| putative heat shock protein [Stenotrophomonas maltophilia K279a]
gi|194350048|gb|ACF53171.1| 20S proteasome A and B subunits [Stenotrophomonas maltophilia
R551-3]
gi|219718685|gb|EED37210.1| ATP-dependent protease HslV [Stenotrophomonas sp. SKA14]
Length = 183
Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats.
Identities = 110/184 (59%), Positives = 139/184 (75%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M HATTI+ VR+ V IAGDGQV+LG TVMK NARKVRRLG G ++AGFA
Sbjct: 1 MDPSQNPNVFHATTIVCVRRGEHVAIAGDGQVTLGHTVMKGNARKVRRLGRDGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KLE++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+
Sbjct: 61 GAAADAFTLFELFEAKLEKH-GQLQRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGGSYALSAARALM T+ A IA +A+ IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALMAHTELDARTIASEAIGIAGDICIYTNRNVV 179
Query: 182 LETL 185
+E L
Sbjct: 180 VEEL 183
>gi|157164513|ref|YP_001466812.1| ATP-dependent protease peptidase subunit [Campylobacter concisus
13826]
gi|166221631|sp|A7ZDF4|HSLV_CAMC1 RecName: Full=ATP-dependent protease subunit HslV
gi|112801304|gb|EAT98648.1| ATP-dependent protease HslV [Campylobacter concisus 13826]
Length = 177
Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats.
Identities = 90/176 (51%), Positives = 122/176 (69%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R++ G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKAVIGGDGQVSFGNTVLKGNAVKIRKIHNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ EK LE LL++ +E +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFEKNLEHTKGDLLKAVIEFSKEWRKDKYLRKLEAMMLVLDRDKIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + AIGSGG+YALSAARAL EE+ ++++ IA +IC+YTN NI L+
Sbjct: 122 GKIAAIGSGGNYALSAARALDKFADIDEEELVKESLKIAGEICIYTNTNIKTYVLE 177
>gi|153952111|ref|YP_001398381.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
subsp. doylei 269.97]
gi|166221635|sp|A7H4F1|HSLV_CAMJD RecName: Full=ATP-dependent protease subunit HslV
gi|152939557|gb|ABS44298.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
subsp. doylei 269.97]
Length = 180
Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats.
Identities = 87/176 (49%), Positives = 121/176 (68%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAIKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L+ LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + AIGSGG+YALSAARAL EE+ + ++ IA +IC+YTN NI ++
Sbjct: 122 GQIAAIGSGGNYALSAARALAKHANLDEEELVKSSLQIAGEICIYTNTNIKTYVIE 177
>gi|325982876|ref|YP_004295278.1| ATP-dependent protease HslVU, peptidase subunit [Nitrosomonas sp.
AL212]
gi|325532395|gb|ADZ27116.1| ATP-dependent protease HslVU, peptidase subunit [Nitrosomonas sp.
AL212]
Length = 173
Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats.
Identities = 96/172 (55%), Positives = 133/172 (77%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ V + GDGQV+LG V K++ARKVRRL I+AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGHHVALGGDGQVTLGAVVAKSSARKVRRLYHDKILAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE + ++R++VELAKDWR D+ LR LEAM+++A++ TL++TG GD++EPE G+
Sbjct: 62 EGKLEAHNGHIMRAAVELAKDWRTDRILRRLEAMLVVANEEATLIVTGAGDIIEPELGIA 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGGSYAL+AARAL+ +T +EI +KA++IA DIC+YTN + ++E +
Sbjct: 122 AIGSGGSYALAAARALLENTDLPPQEIVKKALTIAGDICIYTNQDHIIEMID 173
>gi|189500377|ref|YP_001959847.1| ATP-dependent protease peptidase subunit [Chlorobium
phaeobacteroides BS1]
gi|238692220|sp|B3EJG6|HSLV_CHLPB RecName: Full=ATP-dependent protease subunit HslV
gi|189495818|gb|ACE04366.1| 20S proteasome A and B subunits [Chlorobium phaeobacteroides BS1]
Length = 182
Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats.
Identities = 92/181 (50%), Positives = 135/181 (74%), Gaps = 1/181 (0%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
+++ ++ ATT+L V ++G + DGQ++LG TV+K + RK+RRL + I+ GFAG++
Sbjct: 2 ERYGKPELRATTVLGVIRNGKAALGSDGQMTLGNTVIKHSTRKIRRLRQAQIVTGFAGAT 61
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADA TLL+R E+KL+ Y L R++VELA+DWR DKYLR LEAM+ + L+I+G G
Sbjct: 62 ADAVTLLDRFEEKLQTYGGLLERAAVELARDWRTDKYLRRLEAMLAVVSPEKALIISGTG 121
Query: 126 DVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
DV+EPE+G++AIGSG +AL+AAR+LM T +A +I R+++ IAADIC+YTN +IVLE
Sbjct: 122 DVIEPEDGIVAIGSGSMFALAAARSLMKHTDLNAADIVRESLLIAADICIYTNDHIVLEE 181
Query: 185 L 185
+
Sbjct: 182 V 182
>gi|94676999|ref|YP_588628.1| ATP-dependent protease peptidase subunit [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
gi|166221625|sp|Q1LTT6|HSLV_BAUCH RecName: Full=ATP-dependent protease subunit HslV
gi|94220149|gb|ABF14308.1| ATP-dependent protease HslV [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 180
Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats.
Identities = 99/177 (55%), Positives = 131/177 (74%), Gaps = 2/177 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAFTLLER 74
TTI++VR++G VVI GDGQ ++G T+MK N RKVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIISVRRNGHVVIGGDGQATIGNTIMKGNVRKVRRLYYNDKVIAGFAGGTADAFTLFEL 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E+KLE Y L++++VELAKDWR D+ LR LEA++ +AD+ +L+ITG GDV++PE +
Sbjct: 62 FERKLESYQGHLVKAAVELAKDWRTDRRLRRLEALLAVADENASLIITGNGDVIQPEKDL 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
+AIGSGG YA SAARAL+ +T SA EI +K++ IA DIC+YTN +E L E
Sbjct: 122 IAIGSGGPYAQSAARALLENTNFSAREIVKKSLVIAGDICIYTNQFHTIEELTSTAE 178
>gi|325118172|emb|CBZ53723.1| putative heat shock protein hslv [Neospora caninum Liverpool]
Length = 382
Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats.
Identities = 100/223 (44%), Positives = 136/223 (60%), Gaps = 41/223 (18%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ HATTIL VRK V +AGDG VS GQ ++K NARK+RRL G +I GFAG
Sbjct: 130 FAASPFVPPRHATTILCVRKGDQVCVAGDGMVSQGQMIVKPNARKIRRLQDG-VICGFAG 188
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE---------------- 107
++AD FTLLE+LE KLE+YP QLLRS VELAK WR D+YLR+LE
Sbjct: 189 ATADCFTLLEKLEAKLEEYPGQLLRSCVELAKQWRTDRYLRHLEVGQQKRSKKHEDLFPE 248
Query: 108 -----------------------AMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYA 144
A++++ADK ++L ++G+GDVLE +G++ +GSGG YA
Sbjct: 249 LHKDTKDCLASKCVLSSNPRQSRAVLIVADKKMSLEVSGVGDVLESHDGILGVGSGGPYA 308
Query: 145 LSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
++AARAL SA EI +++M+IAA +C +TN ++ E L+
Sbjct: 309 VAAARALYDIDGLSAHEICKRSMAIAASMCCHTNDRVIFEVLE 351
>gi|167627817|ref|YP_001678317.1| ATP-dependent protease peptidase subunit [Francisella philomiragia
subsp. philomiragia ATCC 25017]
gi|241668378|ref|ZP_04755956.1| ATP-dependent protease peptidase subunit [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254876911|ref|ZP_05249621.1| ATP-dependent protease peptidase subunit [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|167597818|gb|ABZ87816.1| ATP-dependent protease HslVU, peptidase subunit [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|254842932|gb|EET21346.1| ATP-dependent protease peptidase subunit [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 183
Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats.
Identities = 95/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M TTIL VRK VVI GDGQ +LG T+ K N KVR+L G ++ GFAGS+ADAFTL
Sbjct: 4 MKGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
E+ E+KLE Y L R++VE+ ++WR+D+ L LEAMI++AD+ ++L+I+G GDV+ +
Sbjct: 64 EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVADEKLSLLISGAGDVMAADK 123
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N +++IGSG +YA SAA AL+ +T SAEEI RK+++IAAD C+YTNHN +E+L+
Sbjct: 124 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 179
>gi|254369291|ref|ZP_04985303.1| ATP-dependent protease HslVU [Francisella tularensis subsp.
holarctica FSC022]
gi|157122241|gb|EDO66381.1| ATP-dependent protease HslVU [Francisella tularensis subsp.
holarctica FSC022]
Length = 183
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 94/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTIL VRK VVI GDGQ +LG T+ K N KVR+L G ++ GFAGS+ADAFTL
Sbjct: 4 IRGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
E+ E+KLE Y L R++VE+ ++WR+D+ L LEAMI++AD+ ++L+I+G GDV+ +
Sbjct: 64 EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVADEKLSLLISGAGDVMAADK 123
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N +++IGSG +YA SAA AL+ +T SAEEI RK+++IAAD C+YTNHN +E+L+
Sbjct: 124 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 179
>gi|149201421|ref|ZP_01878396.1| ATP-dependent protease peptidase subunit [Roseovarius sp. TM1035]
gi|149145754|gb|EDM33780.1| ATP-dependent protease peptidase subunit [Roseovarius sp. TM1035]
Length = 184
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 114/179 (63%), Positives = 137/179 (76%), Gaps = 3/179 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADA 68
H TTI+ VR+ G VV+AGDGQVSLGQTV+K ARKVRRL G ++AGFAGS+ADA
Sbjct: 5 PGWHGTTIIGVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHPVVAGFAGSTADA 64
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
FTLLERLE KLE P QL R+ VELAKDWR DKYL+ LEAM+++ D VITG GDVL
Sbjct: 65 FTLLERLETKLEATPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGDQLYVITGAGDVL 124
Query: 129 EPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
EPE+ V AIGSGG++AL+AAR L + SAE+IAR+AM+IAADICVYTN + +E +
Sbjct: 125 EPEHDVAAIGSGGNFALAAARGLAENPDLSAEDIARRAMAIAADICVYTNGKLTVERIS 183
>gi|87309984|ref|ZP_01092117.1| ATP-dependent protease peptidase subunit [Blastopirellula marina
DSM 3645]
gi|87287230|gb|EAQ79131.1| ATP-dependent protease peptidase subunit [Blastopirellula marina
DSM 3645]
Length = 180
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 91/177 (51%), Positives = 134/177 (75%), Gaps = 1/177 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+K+ +TTILTVR +G V I GDGQV++ +VMK++A K+R L G +I GFAGS+ADAF+
Sbjct: 1 MKIRSTTILTVRHNGRVAIGGDGQVTMNSSVMKSDAHKIRPLLGGKVICGFAGSTADAFS 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LLER E KL+ YPN + +++ ELAK+WR D+ +R LEA++ + + T +I+G GDV+ P
Sbjct: 61 LLERFEGKLKDYPNNVPKAATELAKEWRTDRAMRRLEALMTVINGEHTFLISGTGDVIAP 120
Query: 131 ENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+GV+ IGSGG YA++AARAL++ SA+EI + A+ IAA I +YTN NI++E+++
Sbjct: 121 TDGVLGIGSGGDYAVAAARALVNHSVLSADEIVKAALQIAAGIDIYTNDNIMVESME 177
>gi|115314759|ref|YP_763482.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. holarctica OSU18]
gi|156502383|ref|YP_001428448.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. holarctica FTNF002-00]
gi|115129658|gb|ABI82845.1| T01 family HslV component of HslUV peptidase (ClpQ) [Francisella
tularensis subsp. holarctica OSU18]
gi|156252986|gb|ABU61492.1| peptidase, T1 family [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 190
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 94/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTIL VRK VVI GDGQ +LG T+ K N KVR+L G ++ GFAGS+ADAFTL
Sbjct: 11 IKGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 70
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
E+ E+KLE Y L R++VE+ ++WR+D+ L LEAMI++AD+ ++L+I+G GDV+ +
Sbjct: 71 EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVADEKLSLLISGAGDVMAADK 130
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N +++IGSG +YA SAA AL+ +T SAEEI RK+++IAAD C+YTNHN +E+L+
Sbjct: 131 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 186
>gi|294953411|ref|XP_002787750.1| ATP-dependent protease hslV, putative [Perkinsus marinus ATCC
50983]
gi|239902774|gb|EER19546.1| ATP-dependent protease hslV, putative [Perkinsus marinus ATCC
50983]
Length = 198
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 111/173 (64%), Positives = 138/173 (79%), Gaps = 1/173 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
+TTILTVRK VVI GDGQV+LG ++K N RK+RR+ NIIAGFAGS+AD L++
Sbjct: 22 RSTTILTVRKGPDVVIMGDGQVTLGDMIIKDNVRKLRRI-NDNIIAGFAGSTADCLALMD 80
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
+LE KLE++P QLLRS VELAK WR DK LR+L+A+IL+AD+ ITL +TG GDVLE ++G
Sbjct: 81 KLEGKLEEHPQQLLRSCVELAKMWRTDKILRHLQAVILVADENITLEVTGNGDVLEAKDG 140
Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ AIGSGG YAL+AARAL+ T+ +A EI KAM IAADICV+TNHN +ETLK
Sbjct: 141 IFAIGSGGPYALAAARALIDTELTAHEICEKAMKIAADICVHTNHNFAVETLK 193
>gi|268679659|ref|YP_003304090.1| 20S proteasome A and subunit betas [Sulfurospirillum deleyianum DSM
6946]
gi|268617690|gb|ACZ12055.1| 20S proteasome A and B subunits [Sulfurospirillum deleyianum DSM
6946]
Length = 181
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 86/179 (48%), Positives = 121/179 (67%), Gaps = 2/179 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL R D VI GDGQV+ G TV+K NA K+R+L G I+AGFAGS+ADAF L
Sbjct: 2 FEATTILACRGDKKAVIGGDGQVTFGNTVLKNNATKIRKLYNGKILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E LEQ L +S +E +K+WR DK LR LEAM+++ D +++G GDV+EPE+
Sbjct: 62 DMFENILEQKKGDLYKSVIEFSKEWRKDKMLRRLEAMMIVLDCQHIFILSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
G + AIGSGG+YA+SAARAL E + ++++ IA+++C+YTN++I L+ +
Sbjct: 122 GKIAAIGSGGNYAISAARALDRHASLDEETLVKESLKIASELCIYTNNHIKTFVLESSE 180
>gi|89256314|ref|YP_513676.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. holarctica LVS]
gi|118497587|ref|YP_898637.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. novicida U112]
gi|134302009|ref|YP_001121978.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. tularensis WY96-3418]
gi|167010171|ref|ZP_02275102.1| ATP-dependent protease HslV [Francisella tularensis subsp.
holarctica FSC200]
gi|187931846|ref|YP_001891831.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. mediasiatica FSC147]
gi|195536285|ref|ZP_03079292.1| ATP-dependent protease HslV [Francisella tularensis subsp. novicida
FTE]
gi|208779387|ref|ZP_03246733.1| ATP-dependent protease HslV [Francisella novicida FTG]
gi|224456877|ref|ZP_03665350.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. tularensis MA00-2987]
gi|254367646|ref|ZP_04983667.1| T01 family hslV component of hslUV peptidase (clpQ) [Francisella
tularensis subsp. holarctica 257]
gi|254370305|ref|ZP_04986310.1| ATP-dependent protease HslVU [Francisella tularensis subsp.
tularensis FSC033]
gi|254372952|ref|ZP_04988441.1| hypothetical protein FTCG_00523 [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374403|ref|ZP_04989885.1| ATP dependent protease HslV [Francisella novicida GA99-3548]
gi|254874622|ref|ZP_05247332.1| hslV, ATP-dependent protease, proteasome-related peptidase subunit
[Francisella tularensis subsp. tularensis MA00-2987]
gi|290953148|ref|ZP_06557769.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. holarctica URFT1]
gi|295313676|ref|ZP_06804260.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. holarctica URFT1]
gi|89144145|emb|CAJ79404.1| ATP-dependent protease, proteasome-related peptidase subunit
[Francisella tularensis subsp. holarctica LVS]
gi|118423493|gb|ABK89883.1| ATP-dependent protease HslVU, peptidase subunit [Francisella
novicida U112]
gi|134049786|gb|ABO46857.1| ATP dependent protease HslV [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134253457|gb|EBA52551.1| T01 family hslV component of hslUV peptidase (clpQ) [Francisella
tularensis subsp. holarctica 257]
gi|151568548|gb|EDN34202.1| ATP-dependent protease HslVU [Francisella tularensis subsp.
tularensis FSC033]
gi|151570679|gb|EDN36333.1| hypothetical protein FTCG_00523 [Francisella novicida GA99-3549]
gi|151572123|gb|EDN37777.1| ATP dependent protease HslV [Francisella novicida GA99-3548]
gi|187712755|gb|ACD31052.1| ATP-dependent protease HslV, peptidase subunit [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194372762|gb|EDX27473.1| ATP-dependent protease HslV [Francisella tularensis subsp. novicida
FTE]
gi|208745187|gb|EDZ91485.1| ATP-dependent protease HslV [Francisella novicida FTG]
gi|254840621|gb|EET19057.1| hslV, ATP-dependent protease, proteasome-related peptidase subunit
[Francisella tularensis subsp. tularensis MA00-2987]
gi|332678289|gb|AEE87418.1| ATP-dependent protease HslV [Francisella cf. novicida Fx1]
Length = 183
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 94/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTIL VRK VVI GDGQ +LG T+ K N KVR+L G ++ GFAGS+ADAFTL
Sbjct: 4 IKGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
E+ E+KLE Y L R++VE+ ++WR+D+ L LEAMI++AD+ ++L+I+G GDV+ +
Sbjct: 64 EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVADEKLSLLISGAGDVMAADK 123
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N +++IGSG +YA SAA AL+ +T SAEEI RK+++IAAD C+YTNHN +E+L+
Sbjct: 124 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 179
>gi|145219767|ref|YP_001130476.1| ATP-dependent protease peptidase subunit [Prosthecochloris
vibrioformis DSM 265]
gi|189036231|sp|A4SER5|HSLV_PROVI RecName: Full=ATP-dependent protease subunit HslV
gi|145205931|gb|ABP36974.1| 20S proteasome, A and B subunits [Chlorobium phaeovibrioides DSM
265]
Length = 182
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 93/175 (53%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT++ V +DG + DGQ++LG TV+K + RK+R L +G ++AGFAG++ADA TL
Sbjct: 8 RIRSTTVIGVLRDGKAALGSDGQMTLGNTVVKHSTRKIRSLYQGRLLAGFAGATADALTL 67
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E+KLE Y +L R++VELA+DWR DKYLR LEAM+ I L+I+G GDV+EPE
Sbjct: 68 LDRFEEKLEAYNGKLERAAVELARDWRTDKYLRRLEAMLAIVSSEKALIISGTGDVIEPE 127
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSG YAL+AARALM T A EI ++++ AADIC+YTN +IV+E +
Sbjct: 128 DGIVAIGSGSMYALAAARALMKHTGLHAGEIVQESLRTAADICIYTNDHIVVEEV 182
>gi|255322167|ref|ZP_05363313.1| ATP-dependent protease HslV [Campylobacter showae RM3277]
gi|255300540|gb|EET79811.1| ATP-dependent protease HslV [Campylobacter showae RM3277]
Length = 177
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 90/176 (51%), Positives = 122/176 (69%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R++ G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKIHGGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E LE LL++ +E +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFENNLEHAKGDLLKAVIEFSKEWRKDKYLRKLEAMMLVLDREKIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + AIGSGG+YALSAARAL Q EE+ ++++ IA +IC+YTN NI L+
Sbjct: 122 GKIAAIGSGGNYALSAARALDKFAQIDEEELVKESLKIAGEICIYTNTNIKTYVLE 177
>gi|325971100|ref|YP_004247291.1| ATP-dependent protease hslV [Spirochaeta sp. Buddy]
gi|324026338|gb|ADY13097.1| ATP-dependent protease hslV [Spirochaeta sp. Buddy]
Length = 178
Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 97/175 (55%), Positives = 126/175 (72%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI+ VRKDG V IAGDGQV+ G T++K+NA KVR L G +I GFAG++ADAFTL
Sbjct: 4 FKGTTIVAVRKDGHVAIAGDGQVTAGDTILKSNAHKVRTLYDGKVITGFAGTTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E E KL+Q+ L RS+VELAK WR+DK LR LEAM+L++D +I G GDV++PE
Sbjct: 64 ELFETKLKQFNGDLTRSAVELAKQWRVDKQLRQLEAMMLVSDGKRIFLINGAGDVVDPER 123
Query: 133 GVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ IGSGG+YALSAA A + SAE+IARK++ IAA +C+YT+ +I +E L
Sbjct: 124 DAIGIGSGGNYALSAALAYLEASPTMSAEQIARKSVEIAAKLCIYTDDSINVEVL 178
>gi|222823761|ref|YP_002575335.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Campylobacter lari RM2100]
gi|254802408|sp|B9KG99|HSLV_CAMLR RecName: Full=ATP-dependent protease subunit HslV
gi|222538983|gb|ACM64084.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Campylobacter lari RM2100]
Length = 180
Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 87/176 (49%), Positives = 121/176 (68%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R+L G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKNNAVKIRKLNNGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ EK L LL+++++ +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFEKLLSSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + AIGSGG+YALSAARAL E + ++++ IA +IC+YTN NI ++
Sbjct: 122 GAIAAIGSGGNYALSAARALAKHSNLDEENLVKESLQIAGEICIYTNTNIKTYVIE 177
>gi|188990097|ref|YP_001902107.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
pv. campestris str. B100]
gi|167731857|emb|CAP50041.1| proteasome-like complex protease subunit [Xanthomonas campestris
pv. campestris]
Length = 259
Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 102/184 (55%), Positives = 138/184 (75%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG G ++AGFA
Sbjct: 77 MDPSQNPNVVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGRDGQVLAGFA 136
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+
Sbjct: 137 GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 195
Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGGSY +A L T+ A+ IA +A++IA DIC+YTN N+V
Sbjct: 196 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVV 255
Query: 182 LETL 185
+E L
Sbjct: 256 VEEL 259
>gi|313500976|gb|ADR62342.1| ATP-dependent protease hslV [Pseudomonas putida BIRD-1]
Length = 162
Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 96/162 (59%), Positives = 129/162 (79%), Gaps = 1/162 (0%)
Query: 29 IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
+ GDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER E +LE++ L+R
Sbjct: 1 MGGDGQVSLGNTVMKGNAKKVRRLYHGQVIAGFAGATADAFTLFERFEGQLEKHQGHLVR 60
Query: 89 SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA 148
++VELAK+WR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++A+GSGG+YA +AA
Sbjct: 61 AAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLIAMGSGGAYAQAAA 120
Query: 149 RALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
RAL++ T SA EIA A++IA DICV+TNHN+ +E + D
Sbjct: 121 RALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAD 162
>gi|317121810|ref|YP_004101813.1| ATP dependent peptidase CodWX, CodW component [Thermaerobacter
marianensis DSM 12885]
gi|315591790|gb|ADU51086.1| ATP dependent peptidase CodWX, CodW component [Thermaerobacter
marianensis DSM 12885]
Length = 182
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 92/180 (51%), Positives = 127/180 (70%), Gaps = 2/180 (1%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSA 66
V+ H TT+L VR+DG V +AGDGQV++ Q VMK ARKVRRL G ++AGFAGS A
Sbjct: 3 QGPVRFHGTTVLAVRRDGKVAMAGDGQVTMEQHMVMKHRARKVRRLYHGRVLAGFAGSVA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DA L+ER E KLE++ QL+R++VELAKDWR D+ LR LEA++++AD L+++G G+
Sbjct: 63 DAVALMERFEAKLEEHAGQLVRAAVELAKDWRTDRLLRRLEAVMVVADADHVLLVSGSGE 122
Query: 127 VLEPENGVMAIGS-GGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
VLEP++G++A+GS G +A T A I R+AM IAA++CVYTN +++E L
Sbjct: 123 VLEPDDGIVAVGSGAGFALAAARALARHTNLDAAAICREAMRIAAELCVYTNDQLIVEEL 182
>gi|319957238|ref|YP_004168501.1| 20S proteasome a and b subunits [Nitratifractor salsuginis DSM
16511]
gi|319419642|gb|ADV46752.1| 20S proteasome A and B subunits [Nitratifractor salsuginis DSM
16511]
Length = 178
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 90/176 (51%), Positives = 120/176 (68%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL R + VI GDGQV+ G TV+K NA K+R L I+AGFAGS+ADAFTL
Sbjct: 2 FEATTILAYRGENHAVIGGDGQVTFGNTVLKGNATKIRTLYHDKILAGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L + LL+S +E +K WR DK+LR LEAM+L+ +K +++G GDV+EPE+
Sbjct: 62 DMFEGILNEKRGDLLKSVIEFSKKWRQDKHLRQLEAMMLVLNKEHIFILSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + AIGSGG++ALSAARAL T A + R+++ IA ++C+YTN NI L LK
Sbjct: 122 GKIAAIGSGGNFALSAARALDRQTDLDAATLVRESLQIAGELCIYTNTNIKLLELK 177
>gi|218288288|ref|ZP_03492587.1| 20S proteasome A and B subunits [Alicyclobacillus acidocaldarius
LAA1]
gi|218241647|gb|EED08820.1| 20S proteasome A and B subunits [Alicyclobacillus acidocaldarius
LAA1]
Length = 181
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 91/178 (51%), Positives = 126/178 (70%), Gaps = 2/178 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+MH TTI + +DG +AGDGQV+ G VMK ARKVRRL ++AGFAGS ADAFT
Sbjct: 4 EMHGTTIFAMLRDGRGAMAGDGQVTFGNNMVMKRGARKVRRLYHDRVVAGFAGSVADAFT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ EKKL+++ L R++VELAK+WR DK L+ LEAM+++ D L+++G G+V++P
Sbjct: 64 LFEKFEKKLDEFQGNLPRAAVELAKEWRSDKILQKLEAMLIVMDARDLLIVSGGGEVIQP 123
Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
++G+ AIGSGG Y + +TQ EIA++A+ IA++ICVYTN IVLET+ V
Sbjct: 124 DDGICAIGSGGGYALAAGRALARNTQLEPAEIAKQALIIASEICVYTNDQIVLETVGV 181
>gi|152990745|ref|YP_001356467.1| ATP-dependent protease peptidase subunit [Nitratiruptor sp.
SB155-2]
gi|166222987|sp|A6Q3Q1|HSLV_NITSB RecName: Full=ATP-dependent protease subunit HslV
gi|151422606|dbj|BAF70110.1| ATP-dependent protease HslVU, peptidase subunit HslV [Nitratiruptor
sp. SB155-2]
Length = 178
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 89/176 (50%), Positives = 123/176 (69%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + DG+ VI GDGQV+ G TV+K NA K+R L G I+AGFAGS+ADAF L
Sbjct: 2 FEATTILGYKGDGIAVIGGDGQVTFGNTVLKGNATKIRTLYNGQILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ EK LE LL+S +E +K+WR D+YLR LEAM+++ + +++G GDV+EPE+
Sbjct: 62 DMFEKILENKKGDLLKSVIEFSKEWRKDRYLRRLEAMMIVLNTKHIFILSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + AIGSGG++ALSAARAL A+ + +++ IA ++C+YTN NI L TL+
Sbjct: 122 GKIAAIGSGGNFALSAARALDKHANLDAKTLVEESLKIAGELCIYTNTNIKLLTLE 177
>gi|209696146|ref|YP_002264076.1| ATP-dependent protease peptidase subunit [Aliivibrio salmonicida
LFI1238]
gi|208010099|emb|CAQ80424.1| ATP-dependent protease HslV (heat shock protein HslV) [Aliivibrio
salmonicida LFI1238]
Length = 176
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 90/174 (51%), Positives = 125/174 (71%), Gaps = 1/174 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ S G + K N +KVRRL +++ GFAGS+ADAF L +
Sbjct: 2 TTIVSVRREGKVVIAGDGQASQGDMIAKGNVKKVRRLYNDSVLVGFAGSTADAFILFDLC 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E+KLE + L +++VELAKDWR D+ LR LEAM+++AD T +L+I+G GD++ +N ++
Sbjct: 62 ERKLEMHQGNLTKAAVELAKDWRSDRNLRRLEAMLIVADDTTSLIISGTGDLINADNDLL 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
IGSGG +A SAA AL+ +T A +IA KA++IA D VYTNHN +E L
Sbjct: 122 TIGSGGYFARSAATALLENTDLDAYDIAVKALTIAGDTDVYTNHNHTVEVLDTN 175
>gi|56707808|ref|YP_169704.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110670279|ref|YP_666836.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. tularensis FSC198]
gi|54113081|gb|AAV29174.1| NT02FT1012 [synthetic construct]
gi|56604300|emb|CAG45321.1| ATP-dependent protease, proteasome-related peptidase subunit
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110320612|emb|CAL08704.1| ATP-dependent protease, proteasome-related peptidase subunit
[Francisella tularensis subsp. tularensis FSC198]
gi|282158982|gb|ADA78373.1| ATP-dependent protease peptidase subunit [Francisella tularensis
subsp. tularensis NE061598]
Length = 183
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 93/176 (52%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TTIL VRK VVI GDGQ +LG T+ K N KVR+L G ++ GFAGS+ADAFTL
Sbjct: 4 IKGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
E+ E+KLE Y L R++VE+ ++WR+D+ L LEAMI++A++ ++L+I+G GDV+ +
Sbjct: 64 EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVANEKLSLLISGAGDVMAADK 123
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
N +++IGSG +YA SAA AL+ +T SAEEI RK+++IAAD C+YTNHN +E+L+
Sbjct: 124 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 179
>gi|157803952|ref|YP_001492501.1| ATP-dependent protease peptidase subunit [Rickettsia canadensis
str. McKiel]
gi|166222995|sp|A8EZD3|HSLV_RICCK RecName: Full=ATP-dependent protease subunit HslV
gi|157785215|gb|ABV73716.1| hypothetical protein A1E_03945 [Rickettsia canadensis str. McKiel]
Length = 182
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 103/179 (57%), Positives = 139/179 (77%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ +H TTIL ++K+ ++IA DGQVS G T++K++ARK+R + IIAGFAGS+AD
Sbjct: 3 DNLALHGTTILCLKKNEDIIIAADGQVSHGNTILKSSARKLRTIANNKIIAGFAGSTADG 62
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
L E+LE K+E+Y LLRS+VELAKDWR DKYLR LEAM+++AD++ L++TG GDV+
Sbjct: 63 LALFEKLEAKIEKYSYNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGDVV 122
Query: 129 EPENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPEN V AIGSGG +ALSAARALM +AEEIA K+M+IAAD+CV++N NI++E +
Sbjct: 123 EPENNVAAIGSGGLFALSAARALMSCENNLTAEEIALKSMNIAADLCVFSNRNIIMEKV 181
>gi|149173421|ref|ZP_01852051.1| ATP-dependent protease peptidase subunit [Planctomyces maris DSM
8797]
gi|148847603|gb|EDL61936.1| ATP-dependent protease peptidase subunit [Planctomyces maris DSM
8797]
Length = 186
Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats.
Identities = 93/182 (51%), Positives = 133/182 (73%), Gaps = 1/182 (0%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
K +TTILTVR +G V I GDGQV+ G TVMK++ RK+R++ G ++ GFAGS+A
Sbjct: 3 SKDNKKWRSTTILTVRHNGQVAIGGDGQVTHGDTVMKSDTRKIRKILDGQVVCGFAGSTA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAF+LLER E K YP + R++ ELA+DWR D+ LR LEA+I++ + +L+ITG GD
Sbjct: 63 DAFSLLERFEVKARDYPGNMPRAATELARDWRTDRVLRKLEALIIVVNDEHSLLITGQGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ P +G++ IGSGG+YA +AARAL+ +Q SA EI + ++ IA+DI +YTN+NI++E L
Sbjct: 123 VVVPSDGIIGIGSGGNYATAAARALVGHSQLSAAEIVKTSLGIASDIDIYTNNNIIVEEL 182
Query: 186 KV 187
+
Sbjct: 183 QC 184
>gi|330836613|ref|YP_004411254.1| ATP-dependent protease hslV [Spirochaeta coccoides DSM 17374]
gi|329748516|gb|AEC01872.1| ATP-dependent protease hslV [Spirochaeta coccoides DSM 17374]
Length = 177
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 101/177 (57%), Positives = 130/177 (73%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TTI+ VR+ G V IAGDGQV+ G TVMK NARKVR L G II GFAG++ADAFT
Sbjct: 1 MSFKGTTIIAVRRGGHVAIAGDGQVTAGDTVMKGNARKVRTLYDGKIIIGFAGATADAFT 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KL+++ L R++V+LAK+WR+D+ LR LEAM+L +D + +I+G GDVLEP
Sbjct: 61 LFELFETKLKKFNGDLTRAAVDLAKEWRIDRNLRRLEAMMLASDGSKIFLISGTGDVLEP 120
Query: 131 ENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E + IGSGGSYA +AARA + T +SAEEIARK++ IAA IC+YTN +I +E L
Sbjct: 121 EYDAIGIGSGGSYAYAAARAYLDSDTSSSAEEIARKSLEIAAHICIYTNTSINVEVL 177
>gi|237752722|ref|ZP_04583202.1| heat shock protein [Helicobacter winghamensis ATCC BAA-430]
gi|229376211|gb|EEO26302.1| heat shock protein [Helicobacter winghamensis ATCC BAA-430]
Length = 177
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 85/176 (48%), Positives = 121/176 (68%), Gaps = 3/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + + VI GDGQV+ G V+K NA K+R L G I++GFAGS+ADAF+L
Sbjct: 2 FHATTILAYKSEKGAVIGGDGQVTFGNCVLKGNATKIRTLYHGKILSGFAGSTADAFSLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E LE LL+S +E +K+WR DKYLR LEAM+++ DK +++G GDV+EPE+
Sbjct: 62 DMFEGILENKKGDLLKSVMEFSKEWRKDKYLRRLEAMMIVLDKERIFILSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G + AIGSGG+YALSAARA+ + +++ +++ IA ++C+YTN NI + L
Sbjct: 122 GKIAAIGSGGNYALSAARAMDRFGSNLEPKDLVLESLKIAGELCIYTNQNIKILEL 177
>gi|260655110|ref|ZP_05860598.1| ATP-dependent protease HslVU, peptidase subunit [Jonquetella
anthropi E3_33 E1]
gi|260630221|gb|EEX48415.1| ATP-dependent protease HslVU, peptidase subunit [Jonquetella
anthropi E3_33 E1]
Length = 186
Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats.
Identities = 96/186 (51%), Positives = 137/186 (73%), Gaps = 1/186 (0%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M + + +H TTI+ VRKDG V +AGDGQ+++G ++KA KVRRL K +++ G
Sbjct: 1 MTTLANGTAFEPIHGTTIVCVRKDGSVAMAGDGQMTMGSQILKAGTVKVRRLYKDSVLVG 60
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
FAG++ADA TL++ L+KKLE+Y LLR++VEL K WR D+ LR+LEAM+L AD+ T++
Sbjct: 61 FAGTTADAMTLMDLLDKKLEEYSGNLLRAAVELTKTWRTDRMLRHLEAMMLAADREHTVL 120
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHN 179
I+G GDV+EPEN V AIGSGG +AL+A+RAL M + A++IA A+ IA++IC+YT+
Sbjct: 121 ISGAGDVVEPENDVAAIGSGGGFALAASRALMMGSSYDAKKIAETAIRIASEICIYTDDK 180
Query: 180 IVLETL 185
I +E L
Sbjct: 181 ITVEVL 186
>gi|227890940|ref|ZP_04008745.1| ATP-dependent protease peptidase subunit [Lactobacillus salivarius
ATCC 11741]
gi|301299311|ref|ZP_07205596.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|227867349|gb|EEJ74770.1| ATP-dependent protease peptidase subunit [Lactobacillus salivarius
ATCC 11741]
gi|300214645|gb|ADJ79061.1| ATP-dependent protease hslV [Lactobacillus salivarius CECT 5713]
gi|300853051|gb|EFK80650.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 175
Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats.
Identities = 90/173 (52%), Positives = 124/173 (71%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V+ +G IAGDGQV+LG+ V MK +ARKVRR+ + GFAG ADA L E+
Sbjct: 2 TTICAVKHNGKTAIAGDGQVTLGEKVIMKGSARKVRRIYNDKVAVGFAGGVADAINLEEK 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E KL +Y L R++VELA++WR D+ L+ LEAM+++ DK L+++G G+V+ P+NGV
Sbjct: 62 FENKLNEYSGNLERAAVELAQEWRGDRTLQKLEAMLIVIDKDNLLIVSGSGEVIAPDNGV 121
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YA +AA AL SA EIA+ A++IAADI ++TNHNI++E L
Sbjct: 122 LAIGSGGNYAQAAAVALSEYSKDMSAGEIAKAALNIAADIDIFTNHNIIVEEL 174
>gi|259046719|ref|ZP_05737120.1| heat shock protein HslV [Granulicatella adiacens ATCC 49175]
gi|259036615|gb|EEW37870.1| heat shock protein HslV [Granulicatella adiacens ATCC 49175]
Length = 176
Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats.
Identities = 85/174 (48%), Positives = 128/174 (73%), Gaps = 4/174 (2%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V+KD V +AGDGQV++G+ V MK ARK+RR+ ++ GFAG ADA TL E
Sbjct: 2 TTICAVKKDNQVAMAGDGQVTMGEKVIMKGTARKIRRIFDNQVLVGFAGGVADAITLEEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E KL+Q+ L R+++E+AK WR D+ L+ LEAM+++ +K L+++G G+V+EP++G+
Sbjct: 62 FEDKLKQFKGNLQRAAIEMAKQWRSDRGLQKLEAMLIVMNKEQVLLVSGTGEVIEPDDGI 121
Query: 135 MAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ IGSGG+YALSAAR L+ + +AE+IAR+++ IA++I ++TN NI+ ETL
Sbjct: 122 LTIGSGGNYALSAARGLLRFGDSNLTAEDIARESLKIASEIDIFTNDNIITETL 175
>gi|90961924|ref|YP_535840.1| ATP-dependent protease peptidase subunit [Lactobacillus salivarius
UCC118]
gi|122448947|sp|Q1WTI9|HSLV_LACS1 RecName: Full=ATP-dependent protease subunit HslV
gi|90821118|gb|ABD99757.1| ATP-dependent protease hslV [Lactobacillus salivarius UCC118]
Length = 175
Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats.
Identities = 90/173 (52%), Positives = 124/173 (71%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V+ +G IAGDGQV+LG+ V MK +ARKVRR+ + GFAG ADA L E+
Sbjct: 2 TTICAVKHNGKTAIAGDGQVTLGEKVIMKGSARKVRRIYNDKVAVGFAGGVADAINLEEK 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E KL +Y L R++VELA++WR D+ L+ LEAM+++ DK L+++G G+V+ P+NGV
Sbjct: 62 FENKLNEYSGNLERAAVELAQEWRGDRTLQKLEAMLIVIDKDNLLIVSGSGEVIVPDNGV 121
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YA +AA AL SA EIA+ A++IAADI ++TNHNI++E L
Sbjct: 122 LAIGSGGNYAQAAAVALSEYSKDMSAGEIAKAALNIAADIDIFTNHNIIVEEL 174
>gi|149194253|ref|ZP_01871350.1| ATP-dependent protease peptidase subunit [Caminibacter
mediatlanticus TB-2]
gi|149135428|gb|EDM23907.1| ATP-dependent protease peptidase subunit [Caminibacter
mediatlanticus TB-2]
Length = 182
Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats.
Identities = 87/179 (48%), Positives = 124/179 (69%), Gaps = 2/179 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ + ATTIL +KDGV VI GDGQV+ G V+K NA+KVR L G I+AGFAGS+ADAF
Sbjct: 2 GINLEATTILGYKKDGVAVIGGDGQVTFGNAVLKGNAKKVRTLYNGKILAGFAGSTADAF 61
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L + E L+ LL++ ++ AK+WR DKYLR LEAM+++ + +++G GDV+E
Sbjct: 62 ILFDMFENHLQNRKGDLLKAVIDFAKEWRQDKYLRRLEAMMIVLNTKHIFILSGSGDVVE 121
Query: 130 PENG-VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
PE+G + AIGSGG++A+SAARAL E + ++++ IA ++C+YTN NI L L+
Sbjct: 122 PEDGKLAAIGSGGNFAISAARALDRHANLDPESLVKESLQIAGELCIYTNTNITLLKLE 180
>gi|307720796|ref|YP_003891936.1| 20S proteasome A and subunit Bs [Sulfurimonas autotrophica DSM
16294]
gi|306978889|gb|ADN08924.1| 20S proteasome A and B subunits [Sulfurimonas autotrophica DSM
16294]
Length = 179
Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats.
Identities = 88/176 (50%), Positives = 120/176 (68%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL R VI GDGQV+ G +V+K NA K+R L G I+AGFAGS+ADAF L
Sbjct: 2 FDATTILAYRGKNKSVIGGDGQVTFGDSVLKGNATKIRTLYHGKILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E+ LE LL+S VE +K WR DK LR LEAM+++ +K ++TG GDV+EPE+
Sbjct: 62 DMFEEFLENKKGDLLKSVVEFSKAWRKDKVLRRLEAMMIVLNKEHIFILTGNGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + +IGSGG++A+SAARAL E++ ++++ IAAD+C+YTNHNI L+
Sbjct: 122 GEIASIGSGGNFAISAARALKKHASLDEEDLVKESLHIAADLCIYTNHNIKTLILE 177
>gi|167856215|ref|ZP_02478951.1| ATP-dependent protease peptidase subunit [Haemophilus parasuis
29755]
gi|219871414|ref|YP_002475789.1| ATP-dependent protease peptidase subunit [Haemophilus parasuis
SH0165]
gi|240947862|ref|ZP_04752302.1| ATP-dependent protease peptidase subunit [Actinobacillus minor
NM305]
gi|257464771|ref|ZP_05629142.1| ATP-dependent protease peptidase subunit [Actinobacillus minor 202]
gi|254802415|sp|B8F689|HSLV_HAEPS RecName: Full=ATP-dependent protease subunit HslV
gi|167852670|gb|EDS23948.1| ATP-dependent protease peptidase subunit [Haemophilus parasuis
29755]
gi|219691618|gb|ACL32841.1| ATP-dependent protease peptidase subunit [Haemophilus parasuis
SH0165]
gi|240297824|gb|EER48260.1| ATP-dependent protease peptidase subunit [Actinobacillus minor
NM305]
gi|257450431|gb|EEV24474.1| ATP-dependent protease peptidase subunit [Actinobacillus minor 202]
Length = 173
Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats.
Identities = 93/172 (54%), Positives = 128/172 (74%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG V K RKVRRL K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNCVEKGTVRKVRRLYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLVKSAVELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEFDVL 121
Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ T+ SA+EI +A+ IA DI +Y+NHN V+E +
Sbjct: 122 AIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDIDIYSNHNHVIEEV 173
>gi|258404688|ref|YP_003197430.1| ATP-dependent protease peptidase subunit [Desulfohalobium retbaense
DSM 5692]
gi|257796915|gb|ACV67852.1| 20S proteasome A and B subunits [Desulfohalobium retbaense DSM
5692]
Length = 181
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 102/176 (57%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TTIL VR+ V +AGDGQV++GQ V +K ARKVRR+ G I+AGFAGS+ADAFT
Sbjct: 4 GLRGTTILAVRRGDGVAMAGDGQVTMGQAVALKHTARKVRRMYHGKIVAGFAGSTADAFT 63
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ER E KLE++ LLRSSVELAK+WR DKYLR LEAM+++AD V+TG GDV+EP
Sbjct: 64 LFERFEAKLEEFRGNLLRSSVELAKEWRTDKYLRRLEAMLVVADAENIFVLTGTGDVIEP 123
Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++GV+ IGSGGSY +A L ++ A++IA +AM IAA++CVYTN ++VLET+
Sbjct: 124 DDGVVGIGSGGSYALAAARALLRHSELPAKDIAEQAMHIAAELCVYTNDSLVLETI 179
>gi|229086383|ref|ZP_04218559.1| ATP-dependent protease hslV [Bacillus cereus Rock3-44]
gi|228696899|gb|EEL49708.1| ATP-dependent protease hslV [Bacillus cereus Rock3-44]
Length = 161
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 90/161 (55%), Positives = 121/161 (75%), Gaps = 4/161 (2%)
Query: 29 IAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
+AGDGQV+ G VMK ARKVR+L +G ++AGFAGS ADAFTL E E KLE+Y L
Sbjct: 1 MAGDGQVTFGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTLFEMFEGKLEEYNGNLQ 60
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
R++VE+AK WR DK LR LEAM+++ D+T L+++G G+V+EP++G++AIGSGG YAL+A
Sbjct: 61 RAAVEMAKQWRGDKMLRQLEAMLIVMDQTTLLLVSGTGEVIEPDDGILAIGSGGHYALAA 120
Query: 148 ARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
RAL +A+ IA+ ++ IA DICVYTNHNI++E L
Sbjct: 121 GRALKQHASDHLTAKAIAKASLEIAGDICVYTNHNIIVEEL 161
>gi|303253152|ref|ZP_07339301.1| ATP-dependent protease peptidase subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307257825|ref|ZP_07539582.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307262229|ref|ZP_07543879.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|322513250|ref|ZP_08066374.1| ATP-dependent protease HslV [Actinobacillus ureae ATCC 25976]
gi|302647834|gb|EFL78041.1| ATP-dependent protease peptidase subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306863731|gb|EFM95657.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306868103|gb|EFM99929.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|322120957|gb|EFX92804.1| ATP-dependent protease HslV [Actinobacillus ureae ATCC 25976]
Length = 173
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 93/172 (54%), Positives = 128/172 (74%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG V K RKVRR+ K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNCVEKGTVRKVRRMYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLIKSAVELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEQDVL 121
Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ TQ SA+EI +A+ IA DI +Y+NHN V+E +
Sbjct: 122 AIGSGGNYAKAAALALLRTQNNLSAKEIVAEALKIAGDIDIYSNHNHVIEEV 173
>gi|262195486|ref|YP_003266695.1| 20S proteasome A and subunit betas [Haliangium ochraceum DSM 14365]
gi|262078833|gb|ACY14802.1| 20S proteasome A and B subunits [Haliangium ochraceum DSM 14365]
Length = 175
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 100/174 (57%), Positives = 130/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M ATTIL+VR+ VVIAGDGQVSLGQT+MKA+ARKVRR+ +G +AGFAGS+AD L
Sbjct: 1 MRATTILSVRRGNHVVIAGDGQVSLGQTIMKASARKVRRMNEGAAVAGFAGSAADGIALF 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERL+ KL + L R+ VE+AKDWR D+ LR LEAM++IAD+ T +++G GDV+EP++
Sbjct: 61 ERLDGKLRGHGGNLRRAVVEMAKDWRTDRVLRRLEAMLIIADREQTYLVSGTGDVIEPDD 120
Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
GV++IGSGG Y +A + T+ +IA AM IAADICVYTNH +V+E L
Sbjct: 121 GVVSIGSGGPYALAAARALIAKTELGVRDIAETAMGIAADICVYTNHKLVIEEL 174
>gi|223040633|ref|ZP_03610903.1| ATP-dependent protease HslV [Campylobacter rectus RM3267]
gi|222878091|gb|EEF13202.1| ATP-dependent protease HslV [Campylobacter rectus RM3267]
Length = 177
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 88/176 (50%), Positives = 121/176 (68%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R++ G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKIHGGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L+ LL++ +E +K+WR DKYLR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFENNLDHAKGDLLKAVIEFSKEWRKDKYLRKLEAMMLVLDREKIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + AIGSGG+YALSAARAL EE+ ++++ IA +IC+YTN NI L+
Sbjct: 122 GKIAAIGSGGNYALSAARALDKFARIDEEELVKESLKIAGEICIYTNTNIKTYVLE 177
>gi|114330627|ref|YP_746849.1| ATP-dependent protease peptidase subunit [Nitrosomonas eutropha
C91]
gi|122312891|sp|Q0AD36|HSLV_NITEC RecName: Full=ATP-dependent protease subunit HslV
gi|114307641|gb|ABI58884.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
family T01B [Nitrosomonas eutropha C91]
Length = 173
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 101/172 (58%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ V + GDGQV+LG V KA+ARKVRRL ++AGFAG +ADAFTL ER
Sbjct: 2 TTIVSVRRGRQVALGGDGQVTLGAVVAKASARKVRRLYHDKVLAGFAGGTADAFTLFERF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
E KLE++ LLRS+VELAKDWR D+ LR LEAM+++AD TL+ITG GDV+EPE G+
Sbjct: 62 EAKLEKHQGHLLRSAVELAKDWRTDRILRRLEAMLVVADHEATLIITGAGDVIEPEQGLA 121
Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
AIGSGG+YA +AARAL+ +T E KA++IA DIC+YTN V+E L
Sbjct: 122 AIGSGGAYAQAAARALLENTNLGPAETVAKALTIAGDICIYTNQVHVIEQLD 173
>gi|289523580|ref|ZP_06440434.1| ATP-dependent protease HslVU, peptidase subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503272|gb|EFD24436.1| ATP-dependent protease HslVU, peptidase subunit [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 178
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 90/177 (50%), Positives = 129/177 (72%), Gaps = 1/177 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI+ VR+ V +AGDGQV+L ++K A+KVRRL GN++AGFAGS+ADA TLL
Sbjct: 2 FKGTTIICVRRGDEVAMAGDGQVTLEHQIIKNGAKKVRRLVGGNVLAGFAGSTADAMTLL 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E+ LE + L+R++V+L K+WR DK LR LEAM+L+AD TL+++G GDVLEP++
Sbjct: 62 ERFERYLEGHSGNLMRAAVDLVKEWRTDKALRRLEAMMLVADLRQTLLLSGAGDVLEPDS 121
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
V +IGSG +AL+AA+A + + A EIA++++ IA+++C+YTN I LE +K
Sbjct: 122 DVASIGSGSGFALAAAKAFIEVSDMGAGEIAKRSLQIASELCIYTNDIITLEVIKGE 178
>gi|227510441|ref|ZP_03940490.1| T01 family HslV component of HslUV peptidase [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227524592|ref|ZP_03954641.1| T01 family HslV component of HslUV peptidase [Lactobacillus
hilgardii ATCC 8290]
gi|227088267|gb|EEI23579.1| T01 family HslV component of HslUV peptidase [Lactobacillus
hilgardii ATCC 8290]
gi|227190093|gb|EEI70160.1| T01 family HslV component of HslUV peptidase [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 185
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 88/185 (47%), Positives = 128/185 (69%), Gaps = 3/185 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFA 62
M + +K ATTI+ VR G + +AGDGQV++G+ V MK A KVRR+ G ++ GFA
Sbjct: 1 MKELIMPIKFEATTIVAVRHSGHLAMAGDGQVTMGEKVIMKGTAHKVRRIYGGKVVVGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
GS ADAF L ER EKKL QY L RS+VELA+DWR D+ L+ LEA++++ + L+++
Sbjct: 61 GSVADAFNLEERFEKKLSQYDGDLKRSAVELAQDWRGDQQLQKLEALLIVMNDKDLLLVS 120
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNI 180
G G+V+EP++ ++AIGSGG++AL+AA A+ SA EIA A+ IA +I ++TN N+
Sbjct: 121 GQGEVIEPDDDILAIGSGGNFALAAATAMKHHAQSMSAREIAEAAIHIAGNIDIFTNQNV 180
Query: 181 VLETL 185
+ E +
Sbjct: 181 ISEEI 185
>gi|28378505|ref|NP_785397.1| ATP-dependent protease peptidase subunit [Lactobacillus plantarum
WCFS1]
gi|254556719|ref|YP_003063136.1| ATP-dependent protease peptidase subunit [Lactobacillus plantarum
JDM1]
gi|300767451|ref|ZP_07077363.1| T01 family HslV component of HslUV peptidase [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308180662|ref|YP_003924790.1| ATP-dependent protease peptidase subunit [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|47605686|sp|Q88W25|HSLV_LACPL RecName: Full=ATP-dependent protease subunit HslV
gi|28271341|emb|CAD64246.1| ATP-dependent protease HslV [Lactobacillus plantarum WCFS1]
gi|254045646|gb|ACT62439.1| ATP-dependent protease peptidase subunit [Lactobacillus plantarum
JDM1]
gi|300495270|gb|EFK30426.1| T01 family HslV component of HslUV peptidase [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308046153|gb|ADN98696.1| ATP-dependent protease peptidase subunit [Lactobacillus plantarum
subsp. plantarum ST-III]
Length = 180
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 88/178 (49%), Positives = 129/178 (72%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
K ATTI VR++G +AGDGQV++G+ VMK A KVRR+ ++ GFAGS ADAF
Sbjct: 3 TKFEATTICAVRQNGHNAMAGDGQVTMGEKVVMKGTAHKVRRIYNDQVVVGFAGSVADAF 62
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L +R EKKL ++ L R++VELA++WR D+ L+ LEA++++ +K L+++G G+V+
Sbjct: 63 NLEDRFEKKLNEFSGNLQRAAVELAQEWRSDQALQKLEALLIVMNKDDMLLVSGSGEVIT 122
Query: 130 PENGVMAIGSGGSYALSAARA--LMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P+N V+AIGSGG++AL+AARA L + SA+E+A A+ IA DI ++TNHN++ ETL
Sbjct: 123 PDNDVLAIGSGGNFALAAARAMQLHAKDMSAKEVAEAAIHIAGDIDIFTNHNVISETL 180
>gi|315924467|ref|ZP_07920689.1| heat shock protein HslVU [Pseudoramibacter alactolyticus ATCC
23263]
gi|315622346|gb|EFV02305.1| heat shock protein HslVU [Pseudoramibacter alactolyticus ATCC
23263]
Length = 180
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 92/176 (52%), Positives = 126/176 (71%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ ATTI+ +R +G V IAGDGQV++G+ V MKA A+KVR L G ++AGFAGS ADAFTL
Sbjct: 2 LKATTIVGIRHNGEVAIAGDGQVTMGEAVIMKATAKKVRTLYNGKVLAGFAGSVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE Y L R++VELAKDWR DK +R LEA++++ D L+I+G G+V+EP+
Sbjct: 62 CELFEHKLETYNGNLKRAAVELAKDWRQDKIMRKLEALLIVMDADTLLIISGTGEVIEPD 121
Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ + AIGSGG+Y +A + SA++IA +A+ IA+ ICVYTN NI + TL+
Sbjct: 122 DEIAAIGSGGNYALAAARALKAHSDLSAKKIAHEALKIASQICVYTNDNIRVLTLE 177
>gi|32035736|ref|ZP_00135612.1| COG5405: ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126209200|ref|YP_001054425.1| ATP-dependent protease peptidase subunit [Actinobacillus
pleuropneumoniae L20]
gi|165977173|ref|YP_001652766.1| ATP-dependent protease peptidase subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|190151066|ref|YP_001969591.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307264430|ref|ZP_07546016.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|166221619|sp|A3N334|HSLV_ACTP2 RecName: Full=ATP-dependent protease subunit HslV
gi|238065805|sp|B3GYW3|HSLV_ACTP7 RecName: Full=ATP-dependent protease subunit HslV
gi|238065806|sp|B0BSG5|HSLV_ACTPJ RecName: Full=ATP-dependent protease subunit HslV
gi|126097992|gb|ABN74820.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|165877274|gb|ABY70322.1| ATP-dependent protease [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|189916197|gb|ACE62449.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306870246|gb|EFN02004.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 173
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 92/172 (53%), Positives = 128/172 (74%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG V K RKVRR+ K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNCVEKGTVRKVRRMYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLIKSAVELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEQDVL 121
Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ T+ SA+EI +A+ IA DI +Y+NHN V+E +
Sbjct: 122 AIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDIDIYSNHNHVIEEV 173
>gi|302812404|ref|XP_002987889.1| hypothetical protein SELMODRAFT_127041 [Selaginella moellendorffii]
gi|300144278|gb|EFJ10963.1| hypothetical protein SELMODRAFT_127041 [Selaginella moellendorffii]
Length = 201
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 106/176 (60%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M TT+L +RK+ VVI GDGQV++G ++K N RKVRR+G+ I AG++ADAFTL
Sbjct: 1 MIGTTVLCIRKNDSVVIIGDGQVTMGAEILKPNVRKVRRIGENVIGGFAAGATADAFTLF 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE++P L R++VELAK WR DK+LR L+A++++AD I+L ITG GDVLEP +
Sbjct: 61 ERLETKLEEHPGLLTRAAVELAKAWRTDKFLRRLDALMVVADAEISLTITGTGDVLEPYD 120
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
G++ IGSGGSYA +AARALM AE+IARKAM IAAD C+YTNHN LET+KV
Sbjct: 121 GIVGIGSGGSYASAAARALMDLPDMDAEKIARKAMKIAADCCIYTNHNFTLETIKV 176
>gi|242309066|ref|ZP_04808221.1| heat shock protein [Helicobacter pullorum MIT 98-5489]
gi|239524490|gb|EEQ64356.1| heat shock protein [Helicobacter pullorum MIT 98-5489]
Length = 178
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 86/177 (48%), Positives = 118/177 (66%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + + VI GDGQV+ G V+K NA K+R L G I++GFAGS+ADAFTL
Sbjct: 2 FEATTILAYKTEKGAVIGGDGQVTFGNCVLKGNATKIRTLYHGKILSGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E LE LL+S +E +K+WR DKYLR LEAM+++ DK +++G GDV+EPE+
Sbjct: 62 DMFEGILENKKGDLLKSVMEFSKEWRKDKYLRRLEAMMIVLDKEKIFILSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G + AIGSGG+YALSAARAL ++ +++ IA ++C+YTN NI + L
Sbjct: 122 GKIAAIGSGGNYALSAARALDRFGKGDMEPRDLVLESLKIAGELCIYTNQNIKILEL 178
>gi|118474850|ref|YP_892167.1| ATP-dependent protease peptidase subunit [Campylobacter fetus
subsp. fetus 82-40]
gi|166221633|sp|A0RPN4|HSLV_CAMFF RecName: Full=ATP-dependent protease subunit HslV
gi|118414076|gb|ABK82496.1| ATP-dependent protease HslV [Campylobacter fetus subsp. fetus
82-40]
Length = 180
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 90/180 (50%), Positives = 126/180 (70%), Gaps = 4/180 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + + +I GDGQVS G TV+K NA K+R+L G I+AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGNKGSIIGGDGQVSFGNTVLKGNAVKIRKLLGGKILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E+ LE LL++ +E +K+WR DK LR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMFERILESTKGDLLKAVIEFSKEWRKDKVLRKLEAMMLVLDREHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
G + AIGSGG+YAL+AARAL + EE+ ++++ IA +IC+YTN NI +T + DE
Sbjct: 122 GKIAAIGSGGNYALAAARALDKFADINEEELVKESLKIAGEICIYTNTNI--KTYALWDE 179
>gi|308271352|emb|CBX27960.1| ATP-dependent protease hslV [uncultured Desulfobacterium sp.]
Length = 194
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 93/181 (51%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
++ + H TTIL VR + +AGDGQV+L V+K A+KVRR+ II GFAG++
Sbjct: 14 QENEIMNFHGTTILAVRHKDKIAVAGDGQVTLNNMVVKHTAKKVRRIYNDTIIVGFAGAT 73
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADA L ERLE KLE+Y L RS+VELAKDWR DKYLR LEA+++ D T +I+G G
Sbjct: 74 ADALNLSERLEGKLERYNGNLTRSAVELAKDWRTDKYLRRLEALMIAVDNTRIFLISGNG 133
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLET 184
DV+EP+ G + IGSGG A +AA AL+ SA EI ++M IA+ +CVYTN I +E
Sbjct: 134 DVIEPDEGFIGIGSGGIGAQAAAAALIKHSNLSAREIVEESMKIASSLCVYTNDKITIEE 193
Query: 185 L 185
L
Sbjct: 194 L 194
>gi|225025432|ref|ZP_03714624.1| hypothetical protein EIKCOROL_02330 [Eikenella corrodens ATCC
23834]
gi|224941716|gb|EEG22925.1| hypothetical protein EIKCOROL_02330 [Eikenella corrodens ATCC
23834]
Length = 177
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 98/175 (56%), Positives = 132/175 (75%), Gaps = 1/175 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI++VR+ G V I GDGQVSLG T++KA ARKVR+L ++AGFAG +ADAFTL
Sbjct: 3 QFDGTTIVSVRRGGQVAIGGDGQVSLGNTIIKATARKVRKLYNNTVLAGFAGGTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+E E KL+++ +L S++ELAK+WR D+ LR LEAM+++ADK TL+ITG GDVLEPE
Sbjct: 63 IELFEAKLQKHQGRLTVSAIELAKEWRTDRALRRLEAMLIVADKDNTLIITGNGDVLEPE 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G+ AIGSGG++A +AARALM +T+ E + +KA+ IA IC+YTN +ETL
Sbjct: 123 GGIAAIGSGGAFAQAAARALMENTELPPETVVKKALEIAGSICIYTNDQHTVETL 177
>gi|78777573|ref|YP_393888.1| ATP-dependent protease peptidase subunit [Sulfurimonas
denitrificans DSM 1251]
gi|123550054|sp|Q30QS8|HSLV_SULDN RecName: Full=ATP-dependent protease subunit HslV
gi|78498113|gb|ABB44653.1| 20S proteasome, A and B subunits [Sulfurimonas denitrificans DSM
1251]
Length = 181
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 87/180 (48%), Positives = 122/180 (67%), Gaps = 2/180 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + VI GDGQV+ G +V+K NA K+R L G I+AGFAGS+ADAF L
Sbjct: 2 FDATTILAYKGKNRAVIGGDGQVTFGNSVLKGNATKIRTLYNGKILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E+ LE +L+S VE +K WR DK LR LEAM+++ + ++TG GDV+EPE+
Sbjct: 62 DMFEEFLEAKKGDILKSVVEFSKAWRKDKVLRRLEAMMIVLNSEHIFILTGNGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
G + +IGSGG++A+SAARAL + E + R+++SIAAD+C+YTNHNI + +L +
Sbjct: 122 GEIASIGSGGNFAISAARALKKHSSLDEEALVRESLSIAADLCIYTNHNIKVLSLDGEKK 181
>gi|34557657|ref|NP_907472.1| ATP-dependent protease peptidase subunit [Wolinella succinogenes
DSM 1740]
gi|47605631|sp|Q7M8Z6|HSLV_WOLSU RecName: Full=ATP-dependent protease subunit HslV
gi|34483374|emb|CAE10372.1| HEAT SHOCK PROTEIN [Wolinella succinogenes]
Length = 176
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 87/175 (49%), Positives = 120/175 (68%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + + VI GDGQV+ G V+K NA K+R L G I++GFAGS+ADAFTL
Sbjct: 2 FEATTILAYKGENHSVIGGDGQVTFGNCVLKGNATKIRMLYNGKILSGFAGSTADAFTLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E E+ LE L++S ++ +K+WR DKYLR LEAM+++ D+ +++G GDV+EPE+
Sbjct: 62 EMFERILENRKGDLVKSVIDFSKEWRKDKYLRRLEAMMIVMDRERLFILSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G + AIGSGG+YALSAARAL E+ R+++ IA ++C+YTN NI L L
Sbjct: 122 GKIAAIGSGGNYALSAARALDKFADLPESELVRESLLIAGELCIYTNTNIKLLEL 176
>gi|224418106|ref|ZP_03656112.1| ATP-dependent protease peptidase subunit [Helicobacter canadensis
MIT 98-5491]
gi|253827433|ref|ZP_04870318.1| ATP-dependent protease peptidase subunit [Helicobacter canadensis
MIT 98-5491]
gi|313141641|ref|ZP_07803834.1| ATP-dependent protease HslVU [Helicobacter canadensis MIT 98-5491]
gi|253510839|gb|EES89498.1| ATP-dependent protease peptidase subunit [Helicobacter canadensis
MIT 98-5491]
gi|313130672|gb|EFR48289.1| ATP-dependent protease HslVU [Helicobacter canadensis MIT 98-5491]
Length = 178
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 85/177 (48%), Positives = 120/177 (67%), Gaps = 4/177 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + + VI GDGQV+ G V+K NA K+R L G I++GFAGS+ADAF+L
Sbjct: 2 FEATTILAYKTENGAVIGGDGQVTFGNCVLKGNATKIRTLYHGQILSGFAGSTADAFSLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E LE LL+S +E +K+WR DKYLR LEAM+++ +K +++G GDV+EPE+
Sbjct: 62 DMFEGILENKKGDLLKSVIEFSKEWRKDKYLRRLEAMMIVLNKEKIFILSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G + AIGSGG+YALSAARAL Q +++ +++ IA ++C+YTN NI + L
Sbjct: 122 GRIAAIGSGGNYALSAARALDRFGGGQMQPKDLVLESLKIAGELCIYTNQNIKILEL 178
>gi|227513450|ref|ZP_03943499.1| T01 family HslV component of HslUV peptidase [Lactobacillus
buchneri ATCC 11577]
gi|227083323|gb|EEI18635.1| T01 family HslV component of HslUV peptidase [Lactobacillus
buchneri ATCC 11577]
Length = 185
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 88/185 (47%), Positives = 128/185 (69%), Gaps = 3/185 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFA 62
M + +K ATTI+ VR G + +AGDGQV++G+ V MK A KVRR+ G ++ GFA
Sbjct: 1 MKELIMPIKFEATTIVAVRHSGHLAMAGDGQVTMGEKVIMKGTAHKVRRIYGGKVVVGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
GS ADAF L ER EKKL QY L RS+VELA+DWR D+ L+ LEA++++ + L+++
Sbjct: 61 GSVADAFNLEERFEKKLSQYDGDLKRSAVELAQDWRGDQQLQKLEALLIVMNDKDLLLVS 120
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNI 180
G G+V+EP++ ++AIGSGG++AL+AA A+ SA EIA A+ IA +I ++TN N+
Sbjct: 121 GQGEVIEPDDDILAIGSGGNFALAAATAMKHNAQSMSAREIAEAAIHIAGNIDIFTNQNV 180
Query: 181 VLETL 185
+ E +
Sbjct: 181 ISEEI 185
>gi|301632118|ref|XP_002945138.1| PREDICTED: ATP-dependent hsl protease ATP-binding subunit hslU-like
[Xenopus (Silurana) tropicalis]
Length = 490
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 94/167 (56%), Positives = 127/167 (76%), Gaps = 6/167 (3%)
Query: 12 KMHATTILTVRK---DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+ H TTIL+VR+ DG V I GDGQV+LG V+K ARKVR+L G ++AGFAG++A
Sbjct: 3 QFHGTTILSVRRLRADGSTDVAIGGDGQVTLGNIVVKGTARKVRKLYHGKVLAGFAGATA 62
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ER E KLE++ L R+++EL KDWR D+ LR LEAM+ +AD +L+ITG GD
Sbjct: 63 DAFTLFERFEAKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADHCASLIITGNGD 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADI 172
VLEPE G++AIGSGG+YA SAA+AL+ +T+ AEE+ RK+++IA ++
Sbjct: 123 VLEPEQGIVAIGSGGAYAHSAAKALLANTELGAEEVVRKSLAIAGEL 169
>gi|307246665|ref|ZP_07528735.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307255650|ref|ZP_07537454.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307260101|ref|ZP_07541812.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306852365|gb|EFM84600.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306861327|gb|EFM93317.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865835|gb|EFM97712.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 173
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 92/172 (53%), Positives = 127/172 (73%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKD V I GDGQ +LG V K RKVRR+ K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDSKVAIGGDGQATLGNCVEKGTVRKVRRMYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLIKSAVELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEQDVL 121
Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ TQ SA+EI +A+ IA DI +Y+NHN V+E +
Sbjct: 122 AIGSGGNYAKAAALALLRTQNNLSAKEIVAEALKIAGDIDIYSNHNHVIEEV 173
>gi|296273491|ref|YP_003656122.1| 20S proteasome subunits AB [Arcobacter nitrofigilis DSM 7299]
gi|296097665|gb|ADG93615.1| 20S proteasome A and B subunits [Arcobacter nitrofigilis DSM 7299]
Length = 178
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 81/176 (46%), Positives = 118/176 (67%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + VI GDGQV+ G TV+K NA K+R L K I+AGFAGS+ADAF L
Sbjct: 2 FDATTILAYKAKDKAVIGGDGQVTFGNTVLKGNATKIRTLYKDKILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E LE LL++ + +K+WR DK LR LEAM+++ +K +++G GDV+EPE+
Sbjct: 62 DMFESHLENTKGDLLKAVIAFSKEWRKDKVLRRLEAMMIVLNKEHIFILSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + +IGSGG++A+SAARAL E++ ++++ IA ++C+YTN NI L ++
Sbjct: 122 GMIASIGSGGNFAISAARALQKHSNLDPEDLVKESLMIAGELCIYTNQNIKLLKIE 177
>gi|307297639|ref|ZP_07577445.1| 20S proteasome A and B subunits [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916899|gb|EFN47281.1| 20S proteasome A and B subunits [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 182
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 96/179 (53%), Positives = 132/179 (73%), Gaps = 1/179 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTIL +RK G VI GDGQ+++G TVMK ARKVR+LG G+++AGFAGS ADA TL
Sbjct: 4 FHGTTILVLRKKGKTVIVGDGQITIGDTVMKGTARKVRKLGDGSVLAGFAGSVADAMTLF 63
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E+KL + + L R++V LAKDWR +K L+NL+A++L+AD+ L+I+G G+V+EP+
Sbjct: 64 EKFEEKLHESNSNLKRAAVNLAKDWRTNKILKNLQALLLVADRESILLISGNGEVIEPDE 123
Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
V+AIGSGGSY +A L ++Q AEEIA K+M IA++IC+YTN N +ETL +
Sbjct: 124 EVLAIGSGGSYALAAARALLRNSQLEAEEIAVKSMEIASEICIYTNTNFTMETLGGEKQ 182
>gi|312969316|ref|ZP_07783518.1| ATP-dependent protease hslV [Escherichia coli 2362-75]
gi|312285863|gb|EFR13781.1| ATP-dependent protease hslV [Escherichia coli 2362-75]
gi|313648819|gb|EFS13258.1| ATP-dependent protease hslV [Shigella flexneri 2a str. 2457T]
gi|323177953|gb|EFZ63537.1| ATP-dependent protease hslV [Escherichia coli 1180]
Length = 154
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 88/151 (58%), Positives = 116/151 (76%), Gaps = 1/151 (0%)
Query: 37 LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD 96
+G TVMK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L++++VELAKD
Sbjct: 1 MGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKD 60
Query: 97 WRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQ 155
WR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +AARAL+ +T+
Sbjct: 61 WRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTE 120
Query: 156 NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
SA EIA KA+ IA DIC+YTNH +E L
Sbjct: 121 LSAREIAEKALDIAGDICIYTNHFHTIEELS 151
>gi|217978697|ref|YP_002362844.1| ATP-dependent protease peptidase subunit [Methylocella silvestris
BL2]
gi|217504073|gb|ACK51482.1| 20S proteasome A and B subunits [Methylocella silvestris BL2]
Length = 188
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 116/186 (62%), Positives = 143/186 (76%), Gaps = 5/186 (2%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + V H TTI+ V+KDG VI GDGQVS+GQT++K NA+KVRRL KG +I GFAG
Sbjct: 1 MTASDFPV-WHGTTIVLVKKDGRTVIGGDGQVSIGQTIVKGNAKKVRRLAKGEVIGGFAG 59
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADAFTL ERLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+AD LV+TG
Sbjct: 60 ATADAFTLFERLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADAKAALVLTG 119
Query: 124 MGDVLEPE----NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHN 179
GDVLEPE VM IGSGG+YAL+AARAL+ T A IAR+A+ IA++ICVYTN +
Sbjct: 120 NGDVLEPEATERGSVMGIGSGGNYALAAARALLDTDRDAAAIARRALEIASEICVYTNRS 179
Query: 180 IVLETL 185
+V+E +
Sbjct: 180 VVIEEI 185
>gi|303249979|ref|ZP_07336181.1| ATP-dependent protease peptidase subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307251033|ref|ZP_07532957.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307253409|ref|ZP_07535280.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302651042|gb|EFL81196.1| ATP-dependent protease peptidase subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306856863|gb|EFM88995.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306859088|gb|EFM91130.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 173
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 91/172 (52%), Positives = 127/172 (73%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKD V I GDGQ +LG V K RKVRR+ K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDSKVAIGGDGQATLGNCVEKGTVRKVRRMYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLIKSAVELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEQDVL 121
Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ T+ SA+EI +A+ IA DI +Y+NHN V+E +
Sbjct: 122 AIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDIDIYSNHNHVIEEV 173
>gi|119357348|ref|YP_911992.1| ATP-dependent protease peptidase subunit [Chlorobium
phaeobacteroides DSM 266]
gi|119354697|gb|ABL65568.1| 20S proteasome, A and B subunits [Chlorobium phaeobacteroides DSM
266]
Length = 183
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 93/183 (50%), Positives = 127/183 (69%), Gaps = 1/183 (0%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + + +TT+L V +DG + DGQ++LG TV+K + RK RRL G IIAGFAG
Sbjct: 1 MMKHDEQLLIRSTTVLGVIRDGKAALGSDGQMTLGNTVLKHSTRKTRRLYHGQIIAGFAG 60
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
++ADA TLL+R E+KLE + +L R++VELA+DWR DKYLR LEAM+ I L+I+G
Sbjct: 61 ATADAVTLLDRFEEKLEAFSGRLERAAVELARDWRTDKYLRRLEAMLAIVTAEKALIISG 120
Query: 124 MGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
GDV+EPE+G++AIGSG Y +A L T SA EI +++ IAADIC+YTN +IV+
Sbjct: 121 TGDVIEPEDGIVAIGSGSMYALAAARSLLAHTTLSAREIVHESLKIAADICIYTNDHIVI 180
Query: 183 ETL 185
E +
Sbjct: 181 EEV 183
>gi|254360689|ref|ZP_04976838.1| arginine ABC superfamily ATP binding cassette transporter, membrane
protein [Mannheimia haemolytica PHL213]
gi|1346417|sp|P49617|HSLV_PASHA RecName: Full=ATP-dependent protease subunit HslV; AltName:
Full=Protein lapC
gi|387856|gb|AAA25533.1| membrane protein [Mannheimia haemolytica]
gi|153091229|gb|EDN73234.1| arginine ABC superfamily ATP binding cassette transporter, membrane
protein [Mannheimia haemolytica PHL213]
Length = 173
Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats.
Identities = 91/172 (52%), Positives = 127/172 (73%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG + K RKVRRL K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNCIEKGTVRKVRRLYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+ + L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLVKSAVELAKEWRTERALRRLEAMMIVANDSEFLLVSGSGDVIEPEQDVL 121
Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ T+ SA+EI +A+ IA DI +Y+N+N V+E +
Sbjct: 122 AIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDIDIYSNYNHVIEEV 173
>gi|189028458|sp|A1BGP1|HSLV_CHLPD RecName: Full=ATP-dependent protease subunit HslV
Length = 182
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 92/174 (52%), Positives = 125/174 (71%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ +TT+L V +DG + DGQ++LG TV+K + RK RRL G IIAGFAG++ADA TLL
Sbjct: 9 IRSTTVLGVIRDGKAALGSDGQMTLGNTVLKHSTRKTRRLYHGQIIAGFAGATADAVTLL 68
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+R E+KLE + +L R++VELA+DWR DKYLR LEAM+ I L+I+G GDV+EPE+
Sbjct: 69 DRFEEKLEAFSGRLERAAVELARDWRTDKYLRRLEAMLAIVTAEKALIISGTGDVIEPED 128
Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSG Y +A L T SA EI +++ IAADIC+YTN +IV+E +
Sbjct: 129 GIVAIGSGSMYALAAARSLLAHTTLSAREIVHESLKIAADICIYTNDHIVIEEV 182
>gi|163781960|ref|ZP_02176960.1| ATP-dependent protease peptidase subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159883180|gb|EDP76684.1| ATP-dependent protease peptidase subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 176
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 102/176 (57%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
++ +TTIL VRK+G VI GDGQV++G +V+K +ARK+RRL K +I GFAGS+AD
Sbjct: 1 MESRSTTILAVRKNGETVIGGDGQVTVGSSVIKHSARKIRRLYKEQVIVGFAGSAADGLA 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L+ERLE+KLE++ LLR+SVELAKDWRMDKYLR LEA++L D+ L+++G GD++EP
Sbjct: 61 LMERLEQKLEEFRGNLLRASVELAKDWRMDKYLRRLEALLLAVDREHMLLLSGNGDIIEP 120
Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V+ IGSGG YA SAA AL +T SAEEI RK++ IA++ICVYTN ++V+E L
Sbjct: 121 DEPVLGIGSGGDYARSAALALYRNTDMSAEEIVRKSLEIASEICVYTNSSLVIEKL 176
>gi|308806509|ref|XP_003080566.1| COG5405: ATP-dependent protease HslVU (ISS) [Ostreococcus tauri]
gi|116059026|emb|CAL54733.1| COG5405: ATP-dependent protease HslVU (ISS) [Ostreococcus tauri]
Length = 391
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 100/179 (55%), Positives = 134/179 (74%), Gaps = 2/179 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ ATT+L +RK+GV I DGQV++G ++K N +KVR + G ++ GFAG++ADAFTL
Sbjct: 37 GVRATTVLCIRKNGVTTIMADGQVTMGSEIVKPNVKKVRVIEPG-VVGGFAGATADAFTL 95
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+RLE++LEQ+P QL R+ VELAK WR DK+LR LEA +++ADK + ITG GDVLEP
Sbjct: 96 FDRLEQQLEQHPGQLTRACVELAKQWRTDKFLRKLEATMIVADKESSFQITGSGDVLEPH 155
Query: 132 NGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
+GV+ IGSGGSYAL+AARAL+ S+ +IA+KAM+IAAD CVYTNHN + + D
Sbjct: 156 DGVIGIGSGGSYALAAARALVDVPGMSSFDIAKKAMTIAADTCVYTNHNFTWQIIGGDD 214
>gi|145348739|ref|XP_001418801.1| ClpYQ (HslUV)-type protease, proteolytic subunit HSLV (ClpQ)
[Ostreococcus lucimarinus CCE9901]
gi|144579031|gb|ABO97094.1| ClpYQ (HslUV)-type protease, proteolytic subunit HSLV (ClpQ)
[Ostreococcus lucimarinus CCE9901]
Length = 200
Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats.
Identities = 104/177 (58%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATT+L VRKDG VI DGQV++G ++K N +KVR + G ++ GFAG++ADAFTL E
Sbjct: 18 HATTVLCVRKDGETVIMADGQVTMGSEIVKPNVKKVRIIEPG-VVGGFAGATADAFTLFE 76
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE++LEQ+P QL R+ VELAK WR DK+LR LEA +++ADK + ITG GDVLEP +G
Sbjct: 77 RLEQQLEQHPGQLTRACVELAKQWRTDKFLRKLEATMIVADKESSFQITGSGDVLEPHDG 136
Query: 134 VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
V+ IGSGGSYAL+AARAL+ A +IA+KAM+IAAD CVYTNHN + + D
Sbjct: 137 VIGIGSGGSYALAAARALVDVPGMKAFDIAKKAMTIAADTCVYTNHNFTHQIIGGPD 193
>gi|323144076|ref|ZP_08078719.1| ATP-dependent protease HslVU, peptidase subunit [Succinatimonas
hippei YIT 12066]
gi|322416152|gb|EFY06843.1| ATP-dependent protease HslVU, peptidase subunit [Succinatimonas
hippei YIT 12066]
Length = 175
Score = 253 bits (648), Expect = 7e-66, Method: Composition-based stats.
Identities = 88/173 (50%), Positives = 129/173 (74%), Gaps = 2/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI++VR++ VV + GDGQV++GQ+ V+KANA KVRRL KG +IAGFAGS+ADAFTLL+
Sbjct: 2 TTIVSVRRNNVVAVGGDGQVTMGQSSVLKANAVKVRRLFKGKVIAGFAGSTADAFTLLDL 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E KLE++ L R+ V L K+WR D+ LR LEA++++ADK + +++G GDV+ ++ +
Sbjct: 62 FESKLEEHQGILERACVALVKNWRTDRALRKLEAILIVADKNASFLVSGTGDVVRMDDDI 121
Query: 135 MAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+A GSGG+Y +A + +T A+ I +K++ IA DICVYTN N V+ET++
Sbjct: 122 LATGSGGNYALAAARALVANTDLDAKTIVKKSLEIAGDICVYTNQNHVIETIE 174
>gi|157737217|ref|YP_001489900.1| ATP-dependent protease peptidase subunit [Arcobacter butzleri
RM4018]
gi|315636931|ref|ZP_07892155.1| ATP-dependent protease HslV [Arcobacter butzleri JV22]
gi|166918418|sp|A8ETF7|HSLV_ARCB4 RecName: Full=ATP-dependent protease subunit HslV
gi|157699071|gb|ABV67231.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
[Arcobacter butzleri RM4018]
gi|315478761|gb|EFU69470.1| ATP-dependent protease HslV [Arcobacter butzleri JV22]
Length = 178
Score = 253 bits (648), Expect = 7e-66, Method: Composition-based stats.
Identities = 83/176 (47%), Positives = 119/176 (67%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + VI GDGQV+ G TV+K NA K+R L K I+AGFAGS+ADAF L
Sbjct: 2 FDATTILAYKGKNKAVIGGDGQVTFGNTVLKGNATKIRTLYKDQILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E LE LL+S + +K+WR DK LR LEAM+++ +K +++G GDV+EPE+
Sbjct: 62 DMFEGHLEACKGDLLKSVIAFSKEWRKDKVLRRLEAMMIVLNKEKIFILSGNGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + +IGSGG++A+SAARAL + EE+ ++++ IA ++C+YTN NI + L+
Sbjct: 122 GAIASIGSGGNFAISAARALAKHSSLDEEELVKESLMIAGELCIYTNQNIKILKLE 177
>gi|163784237|ref|ZP_02179160.1| ATP-dependent protease peptidase subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159880490|gb|EDP74071.1| ATP-dependent protease peptidase subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 162
Score = 253 bits (648), Expect = 7e-66, Method: Composition-based stats.
Identities = 90/162 (55%), Positives = 122/162 (75%), Gaps = 1/162 (0%)
Query: 26 VVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQ 85
VIAGDGQV+LG +VMKA A+K+R+L G +I GFAGS+AD L+ERLE+KL +Y
Sbjct: 1 KTVIAGDGQVTLGNSVMKATAKKIRKLNDGKVIVGFAGSAADGLALMERLEEKLNKYGGN 60
Query: 86 LLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYAL 145
LLR+SVELAK+WRMDK+LR LEA+++ ADK L+I+G GDV++P+ ++A GSGG +A
Sbjct: 61 LLRASVELAKEWRMDKFLRRLEAVLIAADKEHMLLISGNGDVIQPDEPILATGSGGDFAR 120
Query: 146 SAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
SAA AL +T A +I +AM IA +IC+YTN NI +E ++
Sbjct: 121 SAALALYRNTDLDARKIVEEAMKIAGEICIYTNQNITIEEIQ 162
>gi|255994160|ref|ZP_05427295.1| ATP-dependent protease HslVU, peptidase subunit [Eubacterium
saphenum ATCC 49989]
gi|255993828|gb|EEU03917.1| ATP-dependent protease HslVU, peptidase subunit [Eubacterium
saphenum ATCC 49989]
Length = 184
Score = 253 bits (648), Expect = 8e-66, Method: Composition-based stats.
Identities = 88/184 (47%), Positives = 130/184 (70%), Gaps = 2/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFA 62
M + ++ TTI VR++G V I GDGQV++GQ ++MK NA KVR++ K +++GFA
Sbjct: 1 MNRRGDTMEFRGTTICAVRRNGKVCIGGDGQVTMGQHSIMKNNAVKVRKIYKDTVLSGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
GS ADAF+L E+ E KLE+ L +++V LA+ WR DK LR L+A++L+ADK L+I+
Sbjct: 61 GSVADAFSLTEKFENKLEENSGNLKKAAVALAQLWRSDKALRTLDALMLVADKDDILLIS 120
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIV 181
G G+V+EP+ AIGSGG+YA +AA AL +T+ A++I +K++ IA +ICVYTN +I
Sbjct: 121 GNGEVIEPDEDYTAIGSGGNYAYAAATALYNNTELEAKDIVKKSLEIAGNICVYTNEHIT 180
Query: 182 LETL 185
+ L
Sbjct: 181 VIEL 184
>gi|315453298|ref|YP_004073568.1| ATP-dependent protease [Helicobacter felis ATCC 49179]
gi|315132350|emb|CBY82978.1| ATP-dependent protease [Helicobacter felis ATCC 49179]
Length = 181
Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats.
Identities = 84/179 (46%), Positives = 118/179 (65%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
HATTIL + +I GDGQVS G V+K NA K+R L G I++GFAGS+ADA
Sbjct: 2 FHATTILGYKTHFEGKDYAIIGGDGQVSFGNCVLKGNATKIRTLYHGRILSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DK+LR LEAM+++ +K +++G GDV+
Sbjct: 62 FSLFDMFERILEGKKGDLFKSVVDFSKEWRKDKFLRRLEAMMIVLNKQSIFILSGTGDVV 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPE+G + AIGSGG+YALSAARAL + + +++ IA +IC+YTN NI + L
Sbjct: 122 EPEDGKIAAIGSGGNYALSAARALDQFAKLPPKTLVEESLKIAGEICIYTNTNIKILEL 180
>gi|261491847|ref|ZP_05988426.1| ATP-dependent protease peptidase subunit [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261494682|ref|ZP_05991162.1| ATP-dependent protease peptidase subunit [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261309647|gb|EEY10870.1| ATP-dependent protease peptidase subunit [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261312502|gb|EEY13626.1| ATP-dependent protease peptidase subunit [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 173
Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats.
Identities = 91/172 (52%), Positives = 126/172 (73%), Gaps = 2/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG + K RKVRRL K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNCIEKGTVRKVRRLYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLE + L++S+VELAK+WR ++ LR LEAM+++A+ + L+++G GDV+EPE V+
Sbjct: 62 EKKLELHQGHLVKSAVELAKEWRTERALRRLEAMMIVANDSEFLLVSGSGDVIEPEQDVL 121
Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSGG+YA +AA AL+ T+ SA+EI +A+ IA DI +Y+NH V+E +
Sbjct: 122 AIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDIDIYSNHKHVIEEV 173
>gi|331701474|ref|YP_004398433.1| ATP-dependent protease hslV [Lactobacillus buchneri NRRL B-30929]
gi|329128817|gb|AEB73370.1| ATP-dependent protease hslV [Lactobacillus buchneri NRRL B-30929]
Length = 180
Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats.
Identities = 84/179 (46%), Positives = 125/179 (69%), Gaps = 3/179 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADA 68
+K ATTI+ VR +G + +AGDGQV++G+ V MK A KVR + ++ GFAGS ADA
Sbjct: 2 PIKFEATTIVAVRHNGHLAMAGDGQVTMGEKVIMKGTAHKVRLIYDNQVVVGFAGSVADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F L ER EKKL Q+ L RS+VELA++WR D+ L+ LEA++++ + L+++G G+V+
Sbjct: 62 FNLEERFEKKLNQFDGDLKRSAVELAQEWRGDQQLQKLEALLIVMNDKDLLLVSGQGEVI 121
Query: 129 EPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EP++ ++AIGSGG++AL+AA A+ SA EIA A+ IA +I ++TN N++ E L
Sbjct: 122 EPDDDILAIGSGGNFALAAATAMKHHAQDMSAREIAEAAIHIAGNIDIFTNQNVISEEL 180
>gi|71897646|ref|ZP_00679891.1| 20S proteasome, A and B subunits [Xylella fastidiosa Ann-1]
gi|71732549|gb|EAO34602.1| 20S proteasome, A and B subunits [Xylella fastidiosa Ann-1]
Length = 183
Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats.
Identities = 109/184 (59%), Positives = 141/184 (76%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M + HATTI+ VR+ V IAGDGQV+LG TVMK+NARKVRRLG G ++AGFA
Sbjct: 1 MESSQMSNVFHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KLE++ QL R++VELAKDWR ++ L LEA++++ADK +LVI+
Sbjct: 61 GAAADAFTLFELFEGKLEKH-GQLSRAAVELAKDWRTERRLGKLEALLVVADKETSLVIS 119
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGGSYALSAARALM T A IA +A+ IA +IC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIVAIGSGGSYALSAARALMAHTALDARTIATEAIGIAGNICIYTNRNVV 179
Query: 182 LETL 185
++ L
Sbjct: 180 VDEL 183
>gi|193213900|ref|YP_001995099.1| ATP-dependent protease peptidase subunit [Chloroherpeton thalassium
ATCC 35110]
gi|193087377|gb|ACF12652.1| 20S proteasome A and B subunits [Chloroherpeton thalassium ATCC
35110]
Length = 175
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 89/174 (51%), Positives = 129/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M ATT++ V ++G + DGQ++ G T++K + K+R++ G II GFAG++ADA TLL
Sbjct: 1 MRATTVIGVLRNGKAALGSDGQMTYGNTILKHSTTKIRKMHDGKIIVGFAGATADALTLL 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E+KL+ Y +L RS+VELAK+WRMDKYLR LEAM+ + + L+I+G GDV+EPE+
Sbjct: 61 ERFEEKLQAYGGRLDRSAVELAKEWRMDKYLRRLEAMLAVVSREKALIISGTGDVIEPED 120
Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSG YALSAARAL+ N A+ I ++++IA +IC+YTN NI ++ +
Sbjct: 121 GIVAIGSGSMYALSAARALLKHTNCDAKTIVEESLNIAGEICIYTNTNIQIQEI 174
>gi|107104153|ref|ZP_01368071.1| hypothetical protein PaerPA_01005226 [Pseudomonas aeruginosa PACS2]
Length = 163
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 87/162 (53%), Positives = 121/162 (74%), Gaps = 2/162 (1%)
Query: 29 IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
+ GDGQVSLG TVMK NA+KVRRL G ++AGFAG++ADAFTL ER E++LE++ L+R
Sbjct: 1 MGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERFEQQLEKHQGHLVR 60
Query: 89 SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSY--ALS 146
++VELAKDWR D+ L LEAM+ +A+K +L+ITG GDV+EPE+G++A+GSGG + A +
Sbjct: 61 AAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLIAMGSGGGFAQAAA 120
Query: 147 AARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
A + + SA E+A A++IA ICV+TN N+ +E L
Sbjct: 121 LALLQHNAELSAREVAETALNIAGSICVFTNQNLTIEELDSA 162
>gi|77747654|ref|NP_778923.2| ATP-dependent protease peptidase subunit [Xylella fastidiosa
Temecula1]
gi|182681292|ref|YP_001829452.1| ATP-dependent protease peptidase subunit [Xylella fastidiosa M23]
gi|226704550|sp|B2IA19|HSLV_XYLF2 RecName: Full=ATP-dependent protease subunit HslV
gi|182631402|gb|ACB92178.1| 20S proteasome A and B subunits [Xylella fastidiosa M23]
Length = 183
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 109/184 (59%), Positives = 141/184 (76%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M + HATTI+ VR+ V IAGDGQV+LG TVMK+NARKVRRLG G ++AGFA
Sbjct: 1 MESSQMSNVFHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KLE++ QL R++VELAKDWR ++ L LEA++++ADK +LVI+
Sbjct: 61 GAAADAFTLFELFEAKLEKH-GQLSRAAVELAKDWRTERRLGKLEALLVVADKETSLVIS 119
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGGSYALSAARALM T A IA +A+ IA +IC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIVAIGSGGSYALSAARALMAHTALDARTIATEAIGIAGNICIYTNRNVV 179
Query: 182 LETL 185
++ L
Sbjct: 180 VDEL 183
>gi|77747549|ref|NP_298773.2| ATP-dependent protease peptidase subunit [Xylella fastidiosa 9a5c]
Length = 183
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 109/184 (59%), Positives = 141/184 (76%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M + HATTI+ VR+ V IAGDGQV+LG TVMK+NARKVRRLG G ++AGFA
Sbjct: 1 MEPSQMSNVFHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KLE++ QL R++VELAKDWR ++ L LEA++++ADK +LVI+
Sbjct: 61 GAAADAFTLFELFEAKLEKH-GQLSRAAVELAKDWRTERRLGKLEALLVVADKETSLVIS 119
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGGSYALSAARALM T A IA +A+ IA +IC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIVAIGSGGSYALSAARALMAHTALDARTIATEAIGIAGNICIYTNRNVV 179
Query: 182 LETL 185
++ L
Sbjct: 180 VDEL 183
>gi|71274747|ref|ZP_00651035.1| 20S proteasome, A and B subunits [Xylella fastidiosa Dixon]
gi|71901197|ref|ZP_00683300.1| 20S proteasome, A and B subunits [Xylella fastidiosa Ann-1]
gi|170730011|ref|YP_001775444.1| ATP-dependent protease peptidase subunit [Xylella fastidiosa M12]
gi|71164479|gb|EAO14193.1| 20S proteasome, A and B subunits [Xylella fastidiosa Dixon]
gi|71729041|gb|EAO31169.1| 20S proteasome, A and B subunits [Xylella fastidiosa Ann-1]
gi|167964804|gb|ACA11814.1| heat shock protein [Xylella fastidiosa M12]
Length = 183
Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats.
Identities = 108/184 (58%), Positives = 140/184 (76%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M + HATTI+ VR+ V IAGDGQV+LG TVMK+NARKVRRLG G ++AGFA
Sbjct: 1 MEPSQMSNVFHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KLE++ QL R++VELAKDWR ++ L LEA++++ DK +LVI+
Sbjct: 61 GAAADAFTLFELFEAKLEKH-GQLSRAAVELAKDWRTERRLGKLEALLVVVDKETSLVIS 119
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGGSYALSAARALM T A IA +A+ IA +IC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIVAIGSGGSYALSAARALMAHTALDARTIATEAIGIAGNICIYTNGNVV 179
Query: 182 LETL 185
++ L
Sbjct: 180 VDEL 183
>gi|91204119|emb|CAJ71772.1| strongly similar to ATP-dependent Hsl protease, peptidase subunit
[Candidatus Kuenenia stuttgartiensis]
Length = 178
Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats.
Identities = 94/172 (54%), Positives = 133/172 (77%), Gaps = 1/172 (0%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
+TTIL+VRK G V I GDGQV++ TV+K +A+K+RRL ++ GFAGSSAD+F L+ER
Sbjct: 7 STTILSVRKGGHVAIGGDGQVTMQATVVKHDAKKIRRLYHDKVLVGFAGSSADSFALMER 66
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
+ KLEQY +LRS+ ELA++WR DK LR LE+++++ DK + +I+G GDV+EP++G+
Sbjct: 67 FDAKLEQYQGNVLRSAHELAREWRTDKVLRRLESLLVVVDKQHSFLISGSGDVIEPDDGI 126
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ IGSGGSYA++AARAL T S +EI ++++IAADICVYTN NI +E +
Sbjct: 127 IGIGSGGSYAVAAARALAKHTPLSVKEIVAESLNIAADICVYTNKNIKVEEV 178
>gi|32265809|ref|NP_859841.1| ATP-dependent protease peptidase subunit [Helicobacter hepaticus
ATCC 51449]
gi|47605649|sp|Q7VJD3|HSLV_HELHP RecName: Full=ATP-dependent protease subunit HslV
gi|32261858|gb|AAP76907.1| ATP-dependent protease subunit HslV/ClpQ [Helicobacter hepaticus
ATCC 51449]
Length = 180
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 85/179 (47%), Positives = 120/179 (67%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL + +G +I GDGQV+ G V+K NA K+R L G I++GFAGS+ADA
Sbjct: 2 FEATTILGYKGEYNGKKCAIIGGDGQVTFGNCVLKNNATKIRTLYNGEILSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L+RS +E +K+WR DKYLR LEAM+++ + +++G GDV+
Sbjct: 62 FSLFDMFERILEGRKGDLVRSVLEFSKEWRKDKYLRKLEAMMIVLNTEHIYILSGTGDVV 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPE+G + AIGSGG+YALSAARAL + EI +++IA ++C+YTN NI + L
Sbjct: 122 EPEDGTIAAIGSGGNYALSAARALHNYASLPPREIVEHSLAIAGELCIYTNTNIKILEL 180
>gi|282856242|ref|ZP_06265525.1| ATP-dependent protease HslVU, peptidase subunit [Pyramidobacter
piscolens W5455]
gi|282586001|gb|EFB91286.1| ATP-dependent protease HslVU, peptidase subunit [Pyramidobacter
piscolens W5455]
Length = 180
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 89/176 (50%), Positives = 134/176 (76%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
V +H TTI+ VRK+G V + GDGQ++LG ++KA +KVR+L GN++ GFAG++ADA T
Sbjct: 5 VTIHGTTIVCVRKNGQVAMGGDGQMTLGNQIIKAGTKKVRKLYDGNVLVGFAGATADAMT 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L+E EKKL++Y L+R+SVELAK WR D+ L+ LEAM+L+AD+ T++++G GDV+EP
Sbjct: 65 LMELFEKKLQEYSGNLMRASVELAKMWRTDRMLQKLEAMLLVADREHTILLSGAGDVIEP 124
Query: 131 ENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EN ++GSG YAL+AARA + + A EIA++++ IA++IC+YT++ + +E L
Sbjct: 125 ENDAASVGSGSGYALAAARAYLDVSSLDAAEIAKRSLLIASEICIYTDNILTVEVL 180
>gi|82539122|ref|XP_723974.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23478455|gb|EAA15539.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 200
Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats.
Identities = 98/176 (55%), Positives = 129/176 (73%), Gaps = 9/176 (5%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H TTIL + GDG VS G ++K NA+K+RRL K NI+ GFAG++AD FT
Sbjct: 33 IPRHGTTILC-------CLIGDGMVSQGTMIVKGNAKKIRRL-KDNILMGFAGATADCFT 84
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LL++ E K+++YPNQLLRS VELAK WR D+YLR+LEA++++ADK L +TG GDVLEP
Sbjct: 85 LLDKFETKIDEYPNQLLRSCVELAKLWRTDRYLRHLEAVLIVADKDTLLEVTGNGDVLEP 144
Query: 131 ENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+ GSGG YA++AARAL + SA++IA KAM+IAAD+C +TNHN + ETL
Sbjct: 145 SGNVLGTGSGGPYAMAAARALYDIENLSAKDIAYKAMNIAADMCCHTNHNFICETL 200
>gi|237749803|ref|ZP_04580283.1| ATP-dependent protease subunit HslV/ClpQ [Helicobacter bilis ATCC
43879]
gi|229374553|gb|EEO24944.1| ATP-dependent protease subunit HslV/ClpQ [Helicobacter bilis ATCC
43879]
Length = 182
Score = 251 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 92/179 (51%), Positives = 125/179 (69%), Gaps = 6/179 (3%)
Query: 13 MHATTILTV--RKDGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
HATTIL +KDG VI GDGQVS G VMK NA K+R L G I++GFAGS+ADA
Sbjct: 2 FHATTILGYVGQKDGKPYGVIGGDGQVSFGNCVMKGNATKIRSLYNGKILSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE LL+S +E +K+WR DKYLR LEAM+++ + T V++G GDV+
Sbjct: 62 FSLFDMFERILEGKKGDLLKSVMEFSKEWRKDKYLRRLEAMMIVLNATHIYVLSGTGDVV 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPE+G + AIGSGG+YALSAARAL + + +++ +++ IA +IC+YTN NI L +
Sbjct: 122 EPEDGKIAAIGSGGNYALSAARALDKFSDIAPKDLVLESLKIAGEICIYTNTNIKLLEI 180
>gi|311747699|ref|ZP_07721484.1| heat shock protein HslVU, ATPase subunit HslV [Algoriphagus sp.
PR1]
gi|126575687|gb|EAZ79997.1| heat shock protein HslVU, ATPase subunit HslV [Algoriphagus sp.
PR1]
Length = 179
Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats.
Identities = 90/176 (51%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ +TT++ +R +G VVI DGQ +LG TV K+ +K+R L G I+ GFAGS+ADAFTL
Sbjct: 3 RIKSTTVVAIRHNGEVVIGADGQATLGNTVAKSTVKKLRVLQGGKIVTGFAGSTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LE+ E+KL + N + R++VELAK+WR D+ L LEAM+++AD+ L+I+G GDV+EP+
Sbjct: 63 LEKFEEKLGAFGNNMKRAAVELAKEWRTDRMLSKLEAMMIVADQDDILIISGTGDVIEPD 122
Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ IGSG YA SAARA+ + Q SAEE+ R++++IAAD+C+YTNHN+V+E +
Sbjct: 123 MEIATIGSGSMYAQSAARAMKQFAPQMSAEEMVRESLNIAADVCIYTNHNLVIEKV 178
>gi|254459093|ref|ZP_05072516.1| ATP-dependent protease HslV [Campylobacterales bacterium GD 1]
gi|207084364|gb|EDZ61653.1| ATP-dependent protease HslV [Campylobacterales bacterium GD 1]
Length = 180
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 90/178 (50%), Positives = 123/178 (69%), Gaps = 2/178 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + VI GDGQV+ G +V+K NA K+R L +G I+AGFAGS+ADAF L
Sbjct: 2 FDATTILAYKGKNKAVIGGDGQVTFGDSVLKGNATKIRTLHRGKILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E+ LE LL+S +E +K WR DK LR LEAM+++ + ++TG GDV+EPE+
Sbjct: 62 DMFEEFLEDKKGDLLKSVIEFSKAWRKDKVLRRLEAMMIVLNNDHIFILTGNGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
G + +IGSGG+YA+SAARAL Q EE+ R+++SIAAD+C+YTNH+I TL+
Sbjct: 122 GEIASIGSGGNYAISAARALKKHAQLDEEELVRESLSIAADLCIYTNHSIKTLTLEEN 179
>gi|209877204|ref|XP_002140044.1| proteasome A-type and B-type, ATP-dependent protease
[Cryptosporidium muris RN66]
gi|209555650|gb|EEA05695.1| proteasome A-type and B-type, ATP-dependent protease, putative
[Cryptosporidium muris RN66]
Length = 208
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 98/176 (55%), Positives = 131/176 (74%), Gaps = 4/176 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H+TTIL+VR +V+ GDGQVS G V+K NARK+R++ GNI+ GF+G++AD FTL+
Sbjct: 34 WHSTTILSVRTKNSLVMIGDGQVSQGNLVVKPNARKIRKI--GNIVLGFSGATADCFTLV 91
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KL+ Y QL R+ VELA+ WR +KYLR+L+A+I+ ADK +TL +TG GDVLE +
Sbjct: 92 ERLESKLDNYSGQLTRACVELARSWRTEKYLRHLQAVIIAADKNVTLQLTGNGDVLESYD 151
Query: 133 GVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+MAIGSGG YA +AARAL+ + + A +A AM IAAD+CV TNHN V+E +
Sbjct: 152 NIMAIGSGGPYAAAAARALVYSNLELDALYVATSAMKIAADMCVMTNHNFVIEEIS 207
>gi|54037331|sp|P65800|HSLV_XYLFT RecName: Full=ATP-dependent protease subunit HslV
gi|54041542|sp|P65799|HSLV_XYLFA RecName: Full=ATP-dependent protease subunit HslV
gi|9106511|gb|AAF84293.1|AE003978_1 heat shock protein [Xylella fastidiosa 9a5c]
gi|28056693|gb|AAO28572.1| heat shock protein [Xylella fastidiosa Temecula1]
gi|307579743|gb|ADN63712.1| ATP-dependent protease peptidase subunit [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 178
Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats.
Identities = 108/175 (61%), Positives = 139/175 (79%), Gaps = 3/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAFTL 71
HATTI+ VR+ V IAGDGQV+LG TVMK+NARKVRRLG G ++AGFAG++ADAFTL
Sbjct: 5 FHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFAGAAADAFTL 64
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E E KLE++ QL R++VELAKDWR ++ L LEA++++ADK +LVI+G GDV+EPE
Sbjct: 65 FELFEAKLEKH-GQLSRAAVELAKDWRTERRLGKLEALLVVADKETSLVISGTGDVIEPE 123
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+G++AIGSGGSYALSAARALM T A IA +A+ IA +IC+YTN N+V++ L
Sbjct: 124 DGIVAIGSGGSYALSAARALMAHTALDARTIATEAIGIAGNICIYTNRNVVVDEL 178
>gi|319785876|ref|YP_004145351.1| 20S proteasome A and subunit betas [Pseudoxanthomonas suwonensis
11-1]
gi|317464388|gb|ADV26120.1| 20S proteasome A and B subunits [Pseudoxanthomonas suwonensis 11-1]
Length = 183
Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats.
Identities = 104/184 (56%), Positives = 133/184 (72%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M HATTI+ VR+ V IAGDGQV+LG TVMK NARKVRRLG G ++AGFA
Sbjct: 1 MDPSQNPNVFHATTIVCVRRGDKVAIAGDGQVTLGHTVMKGNARKVRRLGRDGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KLE++ QL R++VELAKDWR ++ L LEA++ +AD+ +LVI+
Sbjct: 61 GAAADAFTLFELFEAKLEKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADRETSLVIS 119
Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGGSY +A L TQ A IA +A+ IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTQLDARTIATEAIGIAGDICIYTNRNVV 179
Query: 182 LETL 185
+E L
Sbjct: 180 VEEL 183
>gi|218961142|ref|YP_001740917.1| peptidase component of the HslUV protease [Candidatus Cloacamonas
acidaminovorans]
gi|167729799|emb|CAO80711.1| peptidase component of the HslUV protease [Candidatus Cloacamonas
acidaminovorans]
Length = 176
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 88/176 (50%), Positives = 132/176 (75%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ MH TTI+ + ++G I GDGQV++G ++K A+K+R++ G +I GFAG++ADAF+
Sbjct: 1 MIMHGTTIIGIHRNGKTAICGDGQVTMGDAIVKGKAQKIRKIYDGKVIVGFAGATADAFS 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LLER E+KL+ L +++++LAKDWR D+ LR LEAM++ DK L+I G GDVLEP
Sbjct: 61 LLERFEEKLKTNKGNLKKAAIDLAKDWRQDRILRRLEAMLIAGDKDSILLINGAGDVLEP 120
Query: 131 ENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++ ++AIGSGG+YAL+AARAL T+ A EIA +A++IA+ IC+YTN+N ++E +
Sbjct: 121 DDNIIAIGSGGNYALAAARALAHKTKLGASEIAVEALNIASGICIYTNNNYIVEEI 176
>gi|167630282|ref|YP_001680781.1| ATP-dependent protease hslv [Heliobacterium modesticaldum Ice1]
gi|167593022|gb|ABZ84770.1| ATP-dependent protease hslv [Heliobacterium modesticaldum Ice1]
Length = 186
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 92/182 (50%), Positives = 132/182 (72%), Gaps = 2/182 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+KM TTI+ V++ V +AGDGQ++ G T+MKA A+KVRRL +G +IAG AGS ADA
Sbjct: 4 MKMMGTTIVAVKRGTQVAVAGDGQITFGDRTIMKATAKKVRRLYQGKVIAGIAGSVADAL 63
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TLL++LE K++++ LLR+SV+LAK+WR D++LR LEAMI+ AD LVI+G G+V+E
Sbjct: 64 TLLDKLENKIQEFRGNLLRASVDLAKEWRTDRFLRRLEAMIIAADADHLLVISGNGEVIE 123
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
P++GV+AIGSGG Y +A + + EIAR+A+ +A++ICV+TN I LE ++
Sbjct: 124 PDDGVVAIGSGGPYALAAARALARHSDLAPGEIARQALVVASEICVFTNDRITLEEIEGT 183
Query: 189 DE 190
E
Sbjct: 184 GE 185
>gi|320101719|ref|YP_004177310.1| ATP dependent peptidase CodWX, CodW component [Isosphaera pallida
ATCC 43644]
gi|319749001|gb|ADV60761.1| ATP dependent peptidase CodWX, CodW component [Isosphaera pallida
ATCC 43644]
Length = 176
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 86/174 (49%), Positives = 124/174 (71%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTILT R+ V + GDGQV+LG T+MKA+A K+RRL G ++ GFAG +AD L+
Sbjct: 2 WRRTTILTARRGNRVALGGDGQVTLGATIMKADASKIRRLLDGKVLVGFAGGAADGLALV 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E KL+ +P+ L R++VELAK WR D+ LR LEAM++ AD +L+I+G GDV++P +
Sbjct: 62 EKFEAKLKDHPDNLPRAAVELAKLWRTDRLLRRLEAMLIAADARHSLLISGSGDVIQPND 121
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++A GSGG +AL+AARAL+ T + R+A++IAA I +YTN +++E L
Sbjct: 122 GLVAAGSGGMFALAAARALVKHTDLDPAALVREALTIAAGIDIYTNDQLIVEEL 175
>gi|154174723|ref|YP_001408328.1| ATP-dependent protease peptidase subunit [Campylobacter curvus
525.92]
gi|166221632|sp|A7GYN6|HSLV_CAMC5 RecName: Full=ATP-dependent protease subunit HslV
gi|112803190|gb|EAU00534.1| ATP-dependent protease HslV [Campylobacter curvus 525.92]
Length = 180
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 85/176 (48%), Positives = 122/176 (69%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HATTIL + VI GDGQVS G TV+K NA K+R++ G ++AGFAGS+ADAF L
Sbjct: 2 FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKIKDGKVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E+ LE LL++ +E +K WR DKYLR LEAM+L+ ++ +++G GDV+EPE+
Sbjct: 62 DMFEENLEHAKGDLLKAVIEFSKAWRKDKYLRKLEAMMLVLNREKIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
G + AIGSGG++ALSAARAL E++ +++++IA +IC+YTN NI ++
Sbjct: 122 GKIAAIGSGGNFALSAARALDKFADIDEEKLVKESLTIAGEICIYTNTNIKTYVIE 177
>gi|199599531|ref|ZP_03212919.1| ATP-dependent protease peptidase subunit [Lactobacillus rhamnosus
HN001]
gi|229552210|ref|ZP_04440935.1| T01 family HslV component of HslUV peptidase [Lactobacillus
rhamnosus LMS2-1]
gi|258508409|ref|YP_003171160.1| ATP-dependent protease peptidase subunit [Lactobacillus rhamnosus
GG]
gi|258539623|ref|YP_003174122.1| ATP-dependent protease peptidase subunit [Lactobacillus rhamnosus
Lc 705]
gi|199589572|gb|EDY97690.1| ATP-dependent protease peptidase subunit [Lactobacillus rhamnosus
HN001]
gi|229314432|gb|EEN80405.1| T01 family HslV component of HslUV peptidase [Lactobacillus
rhamnosus LMS2-1]
gi|257148336|emb|CAR87309.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
[Lactobacillus rhamnosus GG]
gi|257151299|emb|CAR90271.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
[Lactobacillus rhamnosus Lc 705]
gi|259649724|dbj|BAI41886.1| ATP-dependent protease peptidase subunit [Lactobacillus rhamnosus
GG]
Length = 174
Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats.
Identities = 86/172 (50%), Positives = 126/172 (73%), Gaps = 3/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI VRKDGV +AGDGQV+LG+ V MK NA+KVRR+ ++ GFAG ADAFTL +
Sbjct: 2 TTIAAVRKDGVTALAGDGQVTLGEKVIMKGNAQKVRRIYHDQVVIGFAGGVADAFTLQDW 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
EKKLE Y L RS+V LA+DWR D L+ LEAM+++ D+ L+++G G+V++P+ V
Sbjct: 62 FEKKLEHYSGNLRRSAVALAQDWRKDPTLQKLEAMMIVMDEHDLLLVSGSGEVIDPDEDV 121
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLET 184
+AIGSGG++A +AA A++ + +IA++A++IA +I ++TNHNI++E+
Sbjct: 122 VAIGSGGNFAQAAAIAMLRHSPDMTPADIAKEAVNIAGNIDIFTNHNIIVES 173
>gi|332799167|ref|YP_004460666.1| ATP-dependent protease hslV [Tepidanaerobacter sp. Re1]
gi|332696902|gb|AEE91359.1| ATP-dependent protease hslV [Tepidanaerobacter sp. Re1]
Length = 177
Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats.
Identities = 91/176 (51%), Positives = 130/176 (73%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
ATTIL + + IAGDGQV+ G T+MK +A+KVR++ G ++AGFAGS ADA TL
Sbjct: 2 FSATTILAMVNEKGAAIAGDGQVTFGQNTIMKHHAKKVRKIYNGEVLAGFAGSVADAITL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E+ E KLE+ L +++VELAK+WR DK L+ LEA+++ ADK LVI+G G+V+EP+
Sbjct: 62 FEKYEDKLEETHGNLEKAAVELAKEWRKDKMLQKLEALLITADKGHILVISGNGEVIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G+ AIGSGGSYAL+AARAL + A++I +++ IA++ICVYTN+ I +E+L+
Sbjct: 122 DGIAAIGSGGSYALAAARALNRYSDLPAQKIVEESLKIASEICVYTNNYISVESLR 177
>gi|197123190|ref|YP_002135141.1| ATP-dependent protease peptidase subunit [Anaeromyxobacter sp. K]
gi|220917979|ref|YP_002493283.1| 20S proteasome A and B subunits [Anaeromyxobacter dehalogenans
2CP-1]
gi|238065807|sp|B4UIH9|HSLV_ANASK RecName: Full=ATP-dependent protease subunit HslV
gi|254802326|sp|B8JES1|HSLV_ANAD2 RecName: Full=ATP-dependent protease subunit HslV
gi|196173039|gb|ACG74012.1| 20S proteasome A and B subunits [Anaeromyxobacter sp. K]
gi|219955833|gb|ACL66217.1| 20S proteasome A and B subunits [Anaeromyxobacter dehalogenans
2CP-1]
Length = 181
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 90/179 (50%), Positives = 124/179 (69%), Gaps = 5/179 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
MH TT+L VR++G VVIAGDGQV+L +TVMKA ARKVRRLG+G ++AGFAG++ADAF L
Sbjct: 3 PMHGTTVLCVRREGRVVIAGDGQVTLDKTVMKATARKVRRLGEGQVVAGFAGATADAFQL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E EKKL+++ L R++VELAK WR D+ LR LEA++L+AD+ LV++G GDV+EP+
Sbjct: 63 FELFEKKLKEHARSLPRAAVELAKQWRTDRMLRRLEALLLVADREHLLVLSGAGDVIEPD 122
Query: 132 N-----GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G +A L + A ++A +AM +AA+IC+YTN N+ +E L
Sbjct: 123 PVANGAAAAIGSGGPYALAAARALLAHSALDARQVAEEAMKLAAEICIYTNGNLTIEEL 181
>gi|325108995|ref|YP_004270063.1| ATP dependent peptidase CodWX, CodW component [Planctomyces
brasiliensis DSM 5305]
gi|324969263|gb|ADY60041.1| ATP dependent peptidase CodWX, CodW component [Planctomyces
brasiliensis DSM 5305]
Length = 188
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 86/173 (49%), Positives = 129/173 (74%), Gaps = 1/173 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
+TTILTVRK V IAGDGQV+ G ++K + RK+RR+ GN++ GFAGS+ADAF+LLE
Sbjct: 13 RSTTILTVRKGNQVAIAGDGQVTYGDAILKQDTRKIRRILDGNVLVGFAGSTADAFSLLE 72
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
R E K + +P + R++ ELA+DWR D+ LR LEAM+++ + +L++TG GDV+ P++G
Sbjct: 73 RFETKAKDFPGNIPRAATELARDWRTDRVLRKLEAMMVVINAEHSLLVTGQGDVVSPQDG 132
Query: 134 VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++ IGSGG+YA++AARAL + SA E+ ++ IA++I +YTN N+++E L
Sbjct: 133 IIGIGSGGNYAVAAARALTRYSDLSAREVVENSLKIASEIDIYTNDNLIVEEL 185
>gi|299536757|ref|ZP_07050065.1| ATP-dependent protease peptidase subunit [Lysinibacillus fusiformis
ZC1]
gi|298727769|gb|EFI68336.1| ATP-dependent protease peptidase subunit [Lysinibacillus fusiformis
ZC1]
Length = 181
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 101/178 (56%), Positives = 130/178 (73%), Gaps = 4/178 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
++HATTI V +G +AGDGQV+LG VMK ARKVRRL G ++AGFAGS ADAFT
Sbjct: 3 QIHATTIFAVHHNGGCAMAGDGQVTLGNAVVMKGTARKVRRLFNGQVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KL +Y L R++VE+AK WR DK LR LEAM+L+ DKT L+++G G+V+EP
Sbjct: 63 LFEMFEGKLNEYNGNLQRAAVEVAKQWRGDKMLRQLEAMLLVMDKTTLLLVSGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
++G++AIGSGG+YALSA RAL +A EIA A+ AA+ICV+TNHNI++E L
Sbjct: 123 DDGILAIGSGGNYALSAGRALKKYAGETMTAREIAEAALETAAEICVFTNHNIIVEAL 180
>gi|126654061|ref|ZP_01725887.1| ATP-dependent protease peptidase subunit [Bacillus sp. B14905]
gi|169827114|ref|YP_001697272.1| ATP-dependent protease peptidase subunit [Lysinibacillus sphaericus
C3-41]
gi|238065884|sp|B1HQJ5|HSLV_LYSSC RecName: Full=ATP-dependent protease subunit HslV
gi|126589441|gb|EAZ83588.1| ATP-dependent protease peptidase subunit [Bacillus sp. B14905]
gi|168991602|gb|ACA39142.1| ATP-dependent protease hslV [Lysinibacillus sphaericus C3-41]
Length = 181
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 100/179 (55%), Positives = 130/179 (72%), Gaps = 4/179 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
++HATTI V +G +AGDGQV+LG VMK A+KVRRL G ++AGFAGS ADAFT
Sbjct: 3 QIHATTIFAVHHNGGCAMAGDGQVTLGNAVVMKGTAKKVRRLFNGQVLAGFAGSVADAFT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E E KL +Y L R++VE+AK WR DK LR LEAM+L+ DKT L+++G G+V+EP
Sbjct: 63 LFEMFEGKLNEYNGNLQRAAVEVAKQWRGDKMLRQLEAMLLVMDKTTLLLVSGTGEVIEP 122
Query: 131 ENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
++G++AIGSGG+YALSA RAL +A EIA A+ AA+ICV+TNHNI++E L
Sbjct: 123 DDGILAIGSGGNYALSAGRALKKYAGETMTAREIAEAALETAAEICVFTNHNIIVEALS 181
>gi|224533762|ref|ZP_03674350.1| ATP-dependent protease HslV [Borrelia burgdorferi CA-11.2a]
gi|224513055|gb|EEF83418.1| ATP-dependent protease HslV [Borrelia burgdorferi CA-11.2a]
Length = 182
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 92/180 (51%), Positives = 133/180 (73%), Gaps = 4/180 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA T
Sbjct: 1 MSFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60
Query: 71 LLERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
L E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV
Sbjct: 61 LFEKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSNNILLISGTGDV 120
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+EPE V++IGSGG+YA SAA A M + + SA E+A K++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALKSLKIAARVCIYTNSNIVLEEIE 180
>gi|119953095|ref|YP_945304.1| ATP-dependent protease peptidase subunit [Borrelia turicatae
91E135]
gi|254802400|sp|A1QZ92|HSLV_BORT9 RecName: Full=ATP-dependent protease subunit HslV
gi|119861866|gb|AAX17634.1| ATP-dependent protease HslV [Borrelia turicatae 91E135]
Length = 180
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 91/180 (50%), Positives = 130/180 (72%), Gaps = 4/180 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TT++ +R+ G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA T
Sbjct: 1 MSFKGTTVIAIRRGGKTVVAADGQVTFGYTVLKSNAIKIRKLFNGKILAGFAGSTSDAIT 60
Query: 71 LLERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
L E+ E+K++ + + R++VELAKDWR DK L LEAM+L+AD L+I+G GDV
Sbjct: 61 LFEKFEEKVKAREDGIIDIKRAAVELAKDWRSDKILHKLEAMMLVADSENILLISGTGDV 120
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+EPE V++IGSGG+YA SAA A M + + SA +IA K++ +AA +C+YTN NIVLE +
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAADIAFKSLKVAARVCIYTNSNIVLEEIS 180
>gi|224532185|ref|ZP_03672817.1| ATP-dependent protease HslV [Borrelia valaisiana VS116]
gi|224511650|gb|EEF82056.1| ATP-dependent protease HslV [Borrelia valaisiana VS116]
Length = 182
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 92/180 (51%), Positives = 134/180 (74%), Gaps = 4/180 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA T
Sbjct: 1 MDFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGRILAGFAGSTSDAIT 60
Query: 71 LLERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
L E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV
Sbjct: 61 LFEKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSNNILLISGTGDV 120
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+EPE V++IGSGG+YA SAA A M + + SA E+AR+++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAFEVARRSLKIAARVCIYTNSNIVLEEIE 180
>gi|260583821|ref|ZP_05851569.1| heat shock protein HslV [Granulicatella elegans ATCC 700633]
gi|260158447|gb|EEW93515.1| heat shock protein HslV [Granulicatella elegans ATCC 700633]
Length = 175
Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats.
Identities = 82/174 (47%), Positives = 126/174 (72%), Gaps = 4/174 (2%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V+K IAGDGQ+++G+ +MK +ARK+RR+ G ++ GFAG ADA TL E
Sbjct: 2 TTICAVKKGNQSAIAGDGQITMGERIIMKGSARKIRRIFGGEVVVGFAGGVADAITLEEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E +L+Q+ L R+++ELAK WR D+ L+ LEAM+++ +K L+++G G+V+EP++G+
Sbjct: 62 FEDQLKQFKGNLQRAAIELAKQWRTDRTLQKLEAMLIVMNKDQLLLVSGTGEVIEPDDGI 121
Query: 135 MAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ IGSGG++ALSAARAL+ SAE+IAR+++ +A++I VYTN I+ E +
Sbjct: 122 LTIGSGGNFALSAARALLRFGDENLSAEDIARESLKVASEIDVYTNDAIITEVV 175
>gi|224437277|ref|ZP_03658249.1| ATP-dependent protease peptidase subunit [Helicobacter cinaedi CCUG
18818]
gi|313143732|ref|ZP_07805925.1| ATP-dependent protease hslV [Helicobacter cinaedi CCUG 18818]
gi|313128763|gb|EFR46380.1| ATP-dependent protease hslV [Helicobacter cinaedi CCUG 18818]
Length = 180
Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats.
Identities = 86/179 (48%), Positives = 118/179 (65%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK---DGVVVI-AGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL + I GDGQV+ G V+K NA K+R L G I++GFAGS+ADA
Sbjct: 2 FEATTILGYKGEFEGKKCAIIGGDGQVTFGNCVLKNNATKIRTLYNGQILSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L+RS +E +K+WR DKYLR LEAM+++ + +++G GDV+
Sbjct: 62 FSLFDMFERILEGRKGDLVRSVLEFSKEWRKDKYLRKLEAMMIVLNTEHIYILSGTGDVV 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPE+G + AIGSGG+YALSAARAL Q +E+ K++ IA ++CVYTN NI + L
Sbjct: 122 EPEDGRIAAIGSGGNYALSAARALDRYAQIPPKELVEKSLHIAGELCVYTNTNIRILEL 180
>gi|312130064|ref|YP_003997404.1| ATP dependent peptidase codwx, codw component [Leadbetterella
byssophila DSM 17132]
gi|311906610|gb|ADQ17051.1| ATP dependent peptidase CodWX, CodW component [Leadbetterella
byssophila DSM 17132]
Length = 180
Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats.
Identities = 89/173 (51%), Positives = 126/173 (72%), Gaps = 2/173 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ +TT+L V +G + + DGQ ++G TV K+N +K+R L G ++AGFAGS+ADAFTL
Sbjct: 3 KIKSTTVLGVFHNGKLALGADGQATMGNTVAKSNVKKIRTLAGGKVVAGFAGSTADAFTL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+E+ E+KL Y L R+++EL K+WR D+YL LEAM+++A+K LVI+G GDVLEP+
Sbjct: 63 IEKFEEKLNTYNGNLRRAAIELVKEWRTDRYLSKLEAMMIVANKEEMLVISGSGDVLEPD 122
Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVL 182
+ V AIGSG YA +AA AL SAEE+ R+ ++IAADIC+YTNHN ++
Sbjct: 123 SQVAAIGSGSMYAQAAALALKKHAPHLSAEEMVREGLTIAADICIYTNHNFII 175
>gi|257459458|ref|ZP_05624567.1| heat shock protein HslV [Campylobacter gracilis RM3268]
gi|257442883|gb|EEV18017.1| heat shock protein HslV [Campylobacter gracilis RM3268]
Length = 182
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 92/181 (50%), Positives = 126/181 (69%), Gaps = 5/181 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
ATTIL + VI GDGQV+ G TV+K NA K+R++GK GN++AGFAGS+ADAF L
Sbjct: 2 FEATTILAYKGAKGSVIGGDGQVTFGNTVLKGNATKIRKIGKEGNVLAGFAGSTADAFNL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ EK L+ LLR+ +E +K WR DKYLR LEAM+L+ D+ +++G GDV+EP+
Sbjct: 62 FDMFEKCLDGAKGDLLRAVIEFSKQWRKDKYLRKLEAMMLVLDRKNIFLLSGTGDVVEPD 121
Query: 132 NG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
+G + AIGSGG+YALSAARAL EE+ ++++ IA +IC+YTN NI +T + D
Sbjct: 122 DGKIAAIGSGGNYALSAARALDKFASLDEEELVKQSLKIAGEICIYTNENI--KTYAIWD 179
Query: 190 E 190
E
Sbjct: 180 E 180
>gi|1448947|gb|AAB04621.1| heat shock protein [Borrelia burgdorferi]
Length = 182
Score = 246 bits (630), Expect = 7e-64, Method: Composition-based stats.
Identities = 91/180 (50%), Positives = 134/180 (74%), Gaps = 4/180 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA T
Sbjct: 1 MSFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60
Query: 71 LLERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
L E+ E+K+++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV
Sbjct: 61 LFEKFEEKIKRKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSNNILLISGTGDV 120
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+EPE V++IGSGG+YA SAA A M + + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180
>gi|301063917|ref|ZP_07204392.1| ATP-dependent protease HslVU, peptidase subunit [delta
proteobacterium NaphS2]
gi|300441992|gb|EFK06282.1| ATP-dependent protease HslVU, peptidase subunit [delta
proteobacterium NaphS2]
Length = 187
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 98/185 (52%), Positives = 131/185 (70%), Gaps = 1/185 (0%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
+ K+ ATT+L VRK+G VI GDGQV+LG T+MK NA KVRR+ + ++AGFAG++
Sbjct: 2 NTDGLDKIRATTVLAVRKNGRCVIGGDGQVTLGDTIMKHNATKVRRMYQDTVLAGFAGAA 61
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
ADAF L ERLE KLE Y L++++VELAKDWR DK LR LEA++L AD+ L+I+G G
Sbjct: 62 ADAFNLFERLEGKLESYGGNLVKAAVELAKDWRTDKILRKLEALLLAADEQHMLIISGTG 121
Query: 126 DVLEPENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
DV+EP+ V AIGSGG YA +AA+AL + + A+ I ++ IAA IC+YTN +I +
Sbjct: 122 DVIEPDMSVAAIGSGGPYAQAAAQALTLHSDLEAKAIVEASLKIAASICLYTNEHITVLE 181
Query: 185 LKVGD 189
L D
Sbjct: 182 LNDDD 186
>gi|154148167|ref|YP_001406620.1| ATP-dependent protease peptidase subunit [Campylobacter hominis
ATCC BAA-381]
gi|166221634|sp|A7I279|HSLV_CAMHC RecName: Full=ATP-dependent protease subunit HslV
gi|153804176|gb|ABS51183.1| ATP-dependent protease HslV [Campylobacter hominis ATCC BAA-381]
Length = 181
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 85/171 (49%), Positives = 125/171 (73%), Gaps = 3/171 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTL 71
ATTIL + +I GDGQV+ G TV+K A K+R++GK G ++AGFAGS+ DAF L
Sbjct: 2 FKATTILAYKGKNGSIIGGDGQVTFGNTVLKGTATKIRKIGKDGKVLAGFAGSTTDAFNL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ EK LE N LL+++V+ +K+WR DKYLR LEAM+L+ D+ +++G+GDV+EP+
Sbjct: 62 FDMFEKCLESAKNDLLKAAVDFSKEWRKDKYLRKLEAMMLVLDREHIFLLSGVGDVVEPD 121
Query: 132 NG-VMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNI 180
+G + AIGSGG+YALSAARAL + EE+ ++++ IA++IC+YTN++I
Sbjct: 122 DGKIAAIGSGGNYALSAARALDKFGNLNEEELVKESLKIASEICIYTNNHI 172
>gi|15594641|ref|NP_212430.1| ATP-dependent protease peptidase subunit [Borrelia burgdorferi B31]
gi|195941350|ref|ZP_03086732.1| ATP-dependent protease peptidase subunit [Borrelia burgdorferi 80a]
gi|216264430|ref|ZP_03436422.1| ATP-dependent protease HslV [Borrelia burgdorferi 156a]
gi|218249363|ref|YP_002374819.1| ATP-dependent protease HslV [Borrelia burgdorferi ZS7]
gi|221217712|ref|ZP_03589180.1| ATP-dependent protease HslV [Borrelia burgdorferi 72a]
gi|223888893|ref|ZP_03623484.1| ATP-dependent protease HslV [Borrelia burgdorferi 64b]
gi|224533183|ref|ZP_03673783.1| ATP-dependent protease HslV [Borrelia burgdorferi WI91-23]
gi|225549025|ref|ZP_03770000.1| ATP-dependent protease HslV [Borrelia burgdorferi 94a]
gi|225550114|ref|ZP_03771074.1| ATP-dependent protease HslV [Borrelia burgdorferi 118a]
gi|225552106|ref|ZP_03773046.1| ATP-dependent protease HslV [Borrelia sp. SV1]
gi|226320597|ref|ZP_03796157.1| ATP-dependent protease HslV [Borrelia burgdorferi 29805]
gi|226321614|ref|ZP_03797140.1| ATP-dependent protease HslV [Borrelia burgdorferi Bol26]
gi|3913882|sp|Q57209|HSLV_BORBU RecName: Full=ATP-dependent protease subunit HslV
gi|226704537|sp|B7J1M4|HSLV_BORBZ RecName: Full=ATP-dependent protease subunit HslV
gi|1165280|gb|AAA85619.1| HsLV [Borrelia burgdorferi]
gi|1196313|gb|AAB51405.1| heat shock response protein [Borrelia burgdorferi]
gi|1234879|emb|CAA65467.1| heat shock protein [Borrelia burgdorferi]
gi|2688170|gb|AAC66652.1| heat shock protein (hslV) [Borrelia burgdorferi B31]
gi|215980903|gb|EEC21710.1| ATP-dependent protease HslV [Borrelia burgdorferi 156a]
gi|218164551|gb|ACK74612.1| ATP-dependent protease HslV [Borrelia burgdorferi ZS7]
gi|221192389|gb|EEE18608.1| ATP-dependent protease HslV [Borrelia burgdorferi 72a]
gi|223885709|gb|EEF56808.1| ATP-dependent protease HslV [Borrelia burgdorferi 64b]
gi|224511910|gb|EEF82311.1| ATP-dependent protease HslV [Borrelia burgdorferi WI91-23]
gi|225369226|gb|EEG98679.1| ATP-dependent protease HslV [Borrelia burgdorferi 118a]
gi|225370251|gb|EEG99689.1| ATP-dependent protease HslV [Borrelia burgdorferi 94a]
gi|225371104|gb|EEH00534.1| ATP-dependent protease HslV [Borrelia sp. SV1]
gi|226232803|gb|EEH31556.1| ATP-dependent protease HslV [Borrelia burgdorferi Bol26]
gi|226234016|gb|EEH32737.1| ATP-dependent protease HslV [Borrelia burgdorferi 29805]
gi|312148445|gb|ADQ31104.1| ATP-dependent protease HslV [Borrelia burgdorferi JD1]
gi|312148992|gb|ADQ29063.1| ATP-dependent protease HslV [Borrelia burgdorferi N40]
Length = 182
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 91/180 (50%), Positives = 133/180 (73%), Gaps = 4/180 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA T
Sbjct: 1 MSFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60
Query: 71 LLERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
L E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV
Sbjct: 61 LFEKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSNNILLISGTGDV 120
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+EPE V++IGSGG+YA SAA A M + + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180
>gi|262166684|ref|ZP_06034421.1| ATP-dependent protease HslV [Vibrio mimicus VM223]
gi|262170393|ref|ZP_06038071.1| ATP-dependent protease HslV [Vibrio mimicus MB-451]
gi|261891469|gb|EEY37455.1| ATP-dependent protease HslV [Vibrio mimicus MB-451]
gi|262026400|gb|EEY45068.1| ATP-dependent protease HslV [Vibrio mimicus VM223]
Length = 156
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 84/149 (56%), Positives = 113/149 (75%), Gaps = 1/149 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK NARKVRRL ++AGFAG +ADAFTL ER E KL+ + L +++VELAKDWR D+
Sbjct: 1 MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+T +L+ITG GDVL+PE+ ++AIGSGG+YA +AA AL+ +T A
Sbjct: 61 ALRRLEAILAVADETASLIITGNGDVLQPEHDLIAIGSGGNYAQAAAIALLENTDLDART 120
Query: 161 IARKAMSIAADICVYTNHNIVLETLKVGD 189
IA KA++IA DICV+TNHN +E L++
Sbjct: 121 IAEKALNIAGDICVFTNHNHTIEELEIPQ 149
>gi|260770841|ref|ZP_05879770.1| ATP-dependent protease HslV [Vibrio furnissii CIP 102972]
gi|260614078|gb|EEX39268.1| ATP-dependent protease HslV [Vibrio furnissii CIP 102972]
Length = 158
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 84/150 (56%), Positives = 115/150 (76%), Gaps = 1/150 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK NARKVRRL ++AGFAG +ADAFTL ER E KL+ + L +++VELAKDWR D+
Sbjct: 1 MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+T +L+ITG GDVL+PE+ ++AIGSGG++A +AA AL+ +T A E
Sbjct: 61 ALRRLEAILAVADETASLIITGNGDVLQPEHDLIAIGSGGNFAQAAAIALLENTDLDARE 120
Query: 161 IARKAMSIAADICVYTNHNIVLETLKVGDE 190
IA+KA+ IA DICV+TNH+ +E L++ E
Sbjct: 121 IAQKALKIAGDICVFTNHHHTIEELEIPPE 150
>gi|224534196|ref|ZP_03674774.1| ATP-dependent protease HslV [Borrelia spielmanii A14S]
gi|224514298|gb|EEF84614.1| ATP-dependent protease HslV [Borrelia spielmanii A14S]
Length = 182
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 91/180 (50%), Positives = 133/180 (73%), Gaps = 4/180 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA T
Sbjct: 1 MGFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60
Query: 71 LLERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
L E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV
Sbjct: 61 LFEKFEEKIKAKGDGLVDIKRAAVDLAKDWRSDKILHKLEAMMLVADSKNILLISGTGDV 120
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+EPE V++IGSGG+YA SAA A M + + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180
>gi|216264062|ref|ZP_03436056.1| ATP-dependent protease HslV [Borrelia afzelii ACA-1]
gi|215980106|gb|EEC20928.1| ATP-dependent protease HslV [Borrelia afzelii ACA-1]
Length = 182
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 91/180 (50%), Positives = 133/180 (73%), Gaps = 4/180 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA T
Sbjct: 1 MGFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60
Query: 71 LLERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
L E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV
Sbjct: 61 LFEKFEEKIKAKGDGLVDIKRAAVDLAKDWRSDKVLHKLEAMMLVADSKNILLISGTGDV 120
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+EPE V++IGSGG+YA SAA A M + + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVVSIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180
>gi|322380635|ref|ZP_08054787.1| ATP-dependent protease, peptidase subunit [Helicobacter suis HS5]
gi|321146957|gb|EFX41705.1| ATP-dependent protease, peptidase subunit [Helicobacter suis HS5]
Length = 180
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 80/179 (44%), Positives = 118/179 (65%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
HATTIL + +I GDGQVS ++K NA K+R L G +++GFAGS+ADA
Sbjct: 2 FHATTILGYKTHFEGKDCAIIGGDGQVSFNNCILKGNATKIRTLHHGQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DK+LR LEAM+++ +K +++G GDV+
Sbjct: 62 FSLFDMFERILEGKKGDLFKSVVDFSKEWRKDKFLRRLEAMMIVLNKQSIFILSGTGDVV 121
Query: 129 EPENG-VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPE+G + AIGSGG+YALSAARAL + + + +++ IA ++C+YTN NI + L
Sbjct: 122 EPEDGKIAAIGSGGNYALSAARALDLFAHLPPKTLVEESLKIAGNLCIYTNQNIKILEL 180
>gi|219684503|ref|ZP_03539446.1| ATP-dependent protease HslV [Borrelia garinii PBr]
gi|219685618|ref|ZP_03540433.1| ATP-dependent protease HslV [Borrelia garinii Far04]
gi|219671865|gb|EED28919.1| ATP-dependent protease HslV [Borrelia garinii PBr]
gi|219672806|gb|EED29830.1| ATP-dependent protease HslV [Borrelia garinii Far04]
Length = 182
Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats.
Identities = 91/180 (50%), Positives = 133/180 (73%), Gaps = 4/180 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA T
Sbjct: 1 MGFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60
Query: 71 LLERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
L E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV
Sbjct: 61 LFEKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSKNILLISGTGDV 120
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+EPE V++IGSGG+YA SAA A M + + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180
>gi|322378786|ref|ZP_08053215.1| ATP-dependent protease peptidase subunit [Helicobacter suis HS1]
gi|321148816|gb|EFX43287.1| ATP-dependent protease peptidase subunit [Helicobacter suis HS1]
Length = 180
Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats.
Identities = 82/179 (45%), Positives = 118/179 (65%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
HATTIL + +I GDGQVS ++K NA K+R L G I++GFAGS+ADA
Sbjct: 2 FHATTILGYKTHFEGKDCAIIGGDGQVSFNNCILKGNATKIRTLHHGQILSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DK+LR LEAM+++ +K +++G GDV+
Sbjct: 62 FSLFDMFERILEGKKGDLFKSVVDFSKEWRKDKFLRRLEAMMIVLNKQSIFILSGTGDVV 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
EPE+G + AIGSGG+YALSAARAL S + + +++ IA ++C+YTN NI + L
Sbjct: 122 EPEDGKIAAIGSGGNYALSAARALDSFAHLPPKTLVEESLKIAGNLCIYTNQNIKILEL 180
>gi|111115121|ref|YP_709739.1| ATP-dependent protease peptidase subunit [Borrelia afzelii PKo]
gi|122956394|sp|Q0SNL5|HSLV_BORAP RecName: Full=ATP-dependent protease subunit HslV
gi|110890395|gb|ABH01563.1| heat shock protein [Borrelia afzelii PKo]
Length = 182
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 91/180 (50%), Positives = 133/180 (73%), Gaps = 4/180 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TT++ ++K+G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA T
Sbjct: 1 MGFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60
Query: 71 LLERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
L E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV
Sbjct: 61 LFEKFEEKIKAKGDGLVDIKRAAVDLAKDWRSDKILHKLEAMMLVADSKNILLISGTGDV 120
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+EPE V++IGSGG+YA SAA A M + + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVVSIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180
>gi|308184322|ref|YP_003928455.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
SJM180]
gi|308060242|gb|ADO02138.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
SJM180]
Length = 180
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 82/179 (45%), Positives = 115/179 (64%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK---DGVVV-IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEFDNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHIFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG+YALSAARAL ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|116333447|ref|YP_794974.1| ATP-dependent protease peptidase subunit [Lactobacillus brevis ATCC
367]
gi|116098794|gb|ABJ63943.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
family T01B [Lactobacillus brevis ATCC 367]
Length = 180
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 81/179 (45%), Positives = 120/179 (67%), Gaps = 3/179 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADA 68
VK ATTI VR +G +AGDGQV++G+ V MK A K+RR+ ++ GFAGS ADA
Sbjct: 2 PVKFEATTICAVRHNGHNAMAGDGQVTMGEKVIMKGTAHKIRRIYNNQVVVGFAGSVADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F L E+ E +L +Y L R++VELAK WR D+ L+ LEA++++ DK L+++G G+V+
Sbjct: 62 FNLEEKFEAQLNEYSGNLQRAAVELAKQWRSDQALQKLEALLIVMDKDEMLLVSGSGEVI 121
Query: 129 EPENGVMAIGSGGSY--ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++ ++AIGSGG++ A + A +T SA+EIA A+ IA I ++TN N++ E L
Sbjct: 122 APDDDILAIGSGGNFALAAATALHHHATDMSAKEIAESAIHIAGGIDIFTNENVISEEL 180
>gi|169830787|ref|YP_001716769.1| ATP-dependent protease peptidase subunit [Candidatus Desulforudis
audaxviator MP104C]
gi|238065854|sp|B1I260|HSLV_DESAP RecName: Full=ATP-dependent protease subunit HslV
gi|169637631|gb|ACA59137.1| 20S proteasome, A and B subunits [Candidatus Desulforudis
audaxviator MP104C]
Length = 177
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 87/175 (49%), Positives = 123/175 (70%), Gaps = 2/175 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ TTI+ V++DG V +AGDGQV LG ++K +A K+RRL K ++AGFAGS ADAF
Sbjct: 1 MTFKGTTIVAVKRDGAVALAGDGQVGLGNGIIVKRDAVKLRRLYKDRVVAGFAGSVADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L ER E KLE+ L R++V+LAKDWR DKYLR LEA++++AD+ L+I+G G+V+E
Sbjct: 61 ALFERFEGKLEESQGNLRRAAVQLAKDWRTDKYLRRLEALLVVADREAVLLISGGGEVIE 120
Query: 130 PENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
P++G++A+GSGG +A T A +IAR+A+ IA+ ICV+TN I +E
Sbjct: 121 PDDGIIAVGSGGAFALAAARALARHTALPAVDIAREALQIASQICVHTNDRITVE 175
>gi|313681856|ref|YP_004059594.1| 20S proteasome a and b subunits [Sulfuricurvum kujiense DSM 16994]
gi|313154716|gb|ADR33394.1| 20S proteasome A and B subunits [Sulfuricurvum kujiense DSM 16994]
Length = 177
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 86/175 (49%), Positives = 123/175 (70%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + VI GDGQV+ GQTV+K NA K+R L G ++AGFAGS+ADAF L
Sbjct: 2 FDATTILAFKGKNKAVIGGDGQVTFGQTVLKNNATKIRTLYNGEVLAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E+ L Q +L+++ ++ +K WR DK LR LEAM+++ ++ ++TG GDV+EPE+
Sbjct: 62 DMFEEHLTQRKGELIKAVIDFSKAWRKDKVLRRLEAMMIVLNQKHIFILTGNGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G + AIGSGGSYA+SAARAL T E + ++++++AAD+C+YTNHNI +L
Sbjct: 122 GEIAAIGSGGSYAISAARALKKHTTLDEETLVKESLAVAADLCIYTNHNIKTLSL 176
>gi|116494890|ref|YP_806624.1| ATP-dependent protease peptidase subunit [Lactobacillus casei ATCC
334]
gi|191638401|ref|YP_001987567.1| ATP-dependent protease peptidase subunit [Lactobacillus casei BL23]
gi|301066450|ref|YP_003788473.1| ATP-dependent protease HslVU peptidase subunit [Lactobacillus casei
str. Zhang]
gi|122263692|sp|Q039E0|HSLV_LACC3 RecName: Full=ATP-dependent protease subunit HslV
gi|238693038|sp|B3WEA8|HSLV_LACCB RecName: Full=ATP-dependent protease subunit HslV
gi|116105040|gb|ABJ70182.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Lactobacillus casei ATCC 334]
gi|190712703|emb|CAQ66709.1| ATP-dependent protease hslV [Lactobacillus casei BL23]
gi|300438857|gb|ADK18623.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Lactobacillus casei str. Zhang]
gi|327382430|gb|AEA53906.1| HslV [Lactobacillus casei LC2W]
gi|327385629|gb|AEA57103.1| HslV [Lactobacillus casei BD-II]
Length = 174
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 85/172 (49%), Positives = 126/172 (73%), Gaps = 3/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI VRKDGV +AGDGQV+LG+ V MK NA+KVRR+ ++ GFAG ADAFTL +
Sbjct: 2 TTIAAVRKDGVTALAGDGQVTLGEKVIMKGNAQKVRRIYHDQVVIGFAGGVADAFTLQDW 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
EKKLE Y L RS+V LA+DWR D L+ LEAM+++ D+ L+++G G+V++P+ V
Sbjct: 62 FEKKLEHYAGNLRRSAVALAQDWRKDPTLQKLEAMMIVMDEHDLLLVSGSGEVIDPDEDV 121
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLET 184
+AIGSGG++A +AA A++ + +IA++A++IA +I ++TNHN+++E+
Sbjct: 122 VAIGSGGNFAQAAAIAMLRHAPDMTPADIAKEAVNIAGNIDIFTNHNVIVES 173
>gi|288573039|ref|ZP_06391396.1| 20S proteasome A and B subunits [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288568780|gb|EFC90337.1| 20S proteasome A and B subunits [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 175
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 92/174 (52%), Positives = 130/174 (74%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL VR+ V +AGDGQ++LG ++K+N KVRRL G ++AGFAGS+ADA TLL
Sbjct: 2 FEGTTILCVRQGDKVAMAGDGQMTLGNQIIKSNTVKVRRLHGGTVLAGFAGSTADAMTLL 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E EKKLE++ L+R++VEL K WR D+ LR LEAM+L+AD++ T++++G GD++EPE+
Sbjct: 62 ELFEKKLEEHGGNLMRAAVELGKQWRTDRMLRRLEAMMLVADRSHTILLSGAGDIIEPEH 121
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
AIGSG +YAL+AARA M + A++IARK++ IA+ IC+YT+ I +E L
Sbjct: 122 DAAAIGSGSAYALAAARAYMECSGWDADKIARKSLEIASSICIYTDDVISMEVL 175
>gi|223992737|ref|XP_002286052.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977367|gb|EED95693.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 169
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 92/162 (56%), Positives = 124/162 (76%), Gaps = 1/162 (0%)
Query: 30 AGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRS 89
GDG VS+G ++K NA+K+RR+ + GFAG++ADAFTLLERLE KL++YP QL RS
Sbjct: 1 MGDGMVSMGSVIVKPNAKKIRRIYPKTVGVGFAGTTADAFTLLERLEGKLDEYPGQLARS 60
Query: 90 SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAAR 149
VELAK WR DKYLR LEA +L+ADK + ITG GDVLE +GV+ +GSG S+A++AAR
Sbjct: 61 CVELAKGWRTDKYLRRLEASLLVADKKASFEITGNGDVLESHDGVLGVGSGSSFAIAAAR 120
Query: 150 ALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
ALM + SAE++ARKAM IA+++C+YTN N +E+L + ++
Sbjct: 121 ALMDNPDLSAEDVARKAMQIASEMCIYTNDNFTIESLAMVED 162
>gi|221633580|ref|YP_002522806.1| ATP-dependent protease peptidase subunit [Thermomicrobium roseum
DSM 5159]
gi|221156008|gb|ACM05135.1| heat shock protein HslV [Thermomicrobium roseum DSM 5159]
Length = 197
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 95/172 (55%), Positives = 122/172 (70%), Gaps = 1/172 (0%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL V +DG V IAGDGQV+ G V+K ARK+R L G ++AGFAG+ ADA TL E
Sbjct: 8 HGTTILGVLRDGRVAIAGDGQVTAGDVVLKHRARKIRALAGGKVLAGFAGAVADALTLFE 67
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
+ E+ L L R++VELAK+WR D+YLR LEA +L+AD L+I+G GDV+EP++G
Sbjct: 68 KFEQHLRTADGDLRRAAVELAKEWRSDRYLRRLEAQLLVADPRQLLMISGDGDVIEPDDG 127
Query: 134 VMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
V AIG+GG Y A +A L T+ SA EIAR AM +AAD+CVYTNH + + T
Sbjct: 128 VAAIGTGGPYAAAAARALLRHTRMSAAEIARAAMEVAADLCVYTNHAVTILT 179
>gi|114566379|ref|YP_753533.1| ATP-dependent protease peptidase subunit [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|122318543|sp|Q0AYP2|HSLV_SYNWW RecName: Full=ATP-dependent protease subunit HslV
gi|114337314|gb|ABI68162.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
family T01B [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 178
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 89/176 (50%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
ATTI+ VRK IAGDGQV+LG T+MK NA K+RRL +G +IAGFAG+ ADAFTL
Sbjct: 2 FQATTIIAVRKGQQTAIAGDGQVTLGQNTIMKQNATKIRRLYEGKVIAGFAGAVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
+ E+KL+Q L +++VE+A++WR D+ LR LEA++++AD +++G G+++EP+
Sbjct: 62 FAKFEEKLKQAGGNLSKAAVEIAREWRSDRILRRLEALLIVADAEKIFIVSGSGELIEPD 121
Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+G+ AIGSGG+YAL+AARAL + ++ +A EIA +++ IA+ ICVYTN I +E ++
Sbjct: 122 DGIAAIGSGGAYALAAARALNAFSELNAREIAVESLKIASGICVYTNEQISVEVIE 177
>gi|187918170|ref|YP_001883733.1| ATP-dependent protease peptidase subunit [Borrelia hermsii DAH]
gi|238689285|sp|B2S007|HSLV_BORHD RecName: Full=ATP-dependent protease subunit HslV
gi|119861018|gb|AAX16813.1| ATP-dependent protease HslV [Borrelia hermsii DAH]
Length = 180
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 90/180 (50%), Positives = 129/180 (71%), Gaps = 4/180 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TT++ +R+ G +A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA T
Sbjct: 1 MSFKGTTVIAIRRGGKTAVAADGQVTFGYTVLKSNAVKIRKLVNGRILAGFAGSTSDAIT 60
Query: 71 LLERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
L E+ E+K++ + + R++VELAKDWR DK L LEAM+L+AD L+I+G GDV
Sbjct: 61 LFEKFEEKVKAREDGIIDIKRAAVELAKDWRSDKILHKLEAMMLVADSENILLISGTGDV 120
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+EPE V++IGSGG+YA SAA A M + + SA +IA K++ +AA +C+YTN NIVLE +
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAADIAFKSLKVAAKVCIYTNSNIVLEEIS 180
>gi|15645142|ref|NP_207312.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
26695]
gi|11132781|sp|O25253|HSLV_HELPY RecName: Full=ATP-dependent protease subunit HslV
gi|2313630|gb|AAD07583.1| heat shock protein (hslV) [Helicobacter pylori 26695]
Length = 180
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVR----KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGELNHKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++GMGDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHIFILSGMGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG+YALSAARAL ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|227535112|ref|ZP_03965161.1| T01 family HslV component of HslUV peptidase [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|239631510|ref|ZP_04674541.1| ATP-dependent protease hslV [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|227187253|gb|EEI67320.1| T01 family HslV component of HslUV peptidase [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|239525975|gb|EEQ64976.1| ATP-dependent protease hslV [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 176
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 85/172 (49%), Positives = 126/172 (73%), Gaps = 3/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI VRKDGV +AGDGQV+LG+ V MK NA+KVRR+ ++ GFAG ADAFTL +
Sbjct: 4 TTIAAVRKDGVTALAGDGQVTLGEKVIMKGNAQKVRRIYHDQVVIGFAGGVADAFTLQDW 63
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
EKKLE Y L RS+V LA+DWR D L+ LEAM+++ D+ L+++G G+V++P+ V
Sbjct: 64 FEKKLEHYAGNLRRSAVALAQDWRKDPTLQKLEAMMIVMDEHDLLLVSGSGEVIDPDEDV 123
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLET 184
+AIGSGG++A +AA A++ + +IA++A++IA +I ++TNHN+++E+
Sbjct: 124 VAIGSGGNFAQAAAIAMLRHAPDMTPADIAKEAVNIAGNIDIFTNHNVIVES 175
>gi|317010765|gb|ADU84512.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
SouthAfrica7]
Length = 180
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEFNNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG+YALSAARAL +++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPKKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|21232923|ref|NP_638840.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66767004|ref|YP_241766.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
pv. campestris str. 8004]
gi|24211774|sp|Q8P551|HSLV_XANCP RecName: Full=ATP-dependent protease subunit HslV
gi|81307010|sp|Q4UYX7|HSLV_XANC8 RecName: Full=ATP-dependent protease subunit HslV
gi|21114759|gb|AAM42764.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66572336|gb|AAY47746.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
campestris pv. campestris str. 8004]
Length = 183
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 102/184 (55%), Positives = 138/184 (75%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG G ++AGFA
Sbjct: 1 MDPSQNPNVVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGRDGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+
Sbjct: 61 GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119
Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGGSY +A L T+ A+ IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVV 179
Query: 182 LETL 185
+E L
Sbjct: 180 VEEL 183
>gi|313901987|ref|ZP_07835403.1| ATP dependent peptidase CodWX, CodW component [Thermaerobacter
subterraneus DSM 13965]
gi|313467776|gb|EFR63274.1| ATP dependent peptidase CodWX, CodW component [Thermaerobacter
subterraneus DSM 13965]
Length = 182
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 94/177 (53%), Positives = 128/177 (72%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ H TTIL VR++G V +AGDGQV+L Q VMK ARKVRRL G ++AGFAGS ADA
Sbjct: 6 PRFHGTTILAVRRNGRVAMAGDGQVTLQQHMVMKHRARKVRRLYHGRVLAGFAGSVADAV 65
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L+ER E KLE++ QL+R++VELAKDWR D+ LR LEA++++AD L+++G G+VLE
Sbjct: 66 ALMERFEGKLEEHGGQLVRAAVELAKDWRTDRLLRRLEALLVVADADHLLLVSGSGEVLE 125
Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P++G++A+GSGG + +A T A I R+AM IAA++CVYTN +V+E L
Sbjct: 126 PDDGIVAVGSGGGFALAAARALARHTGLDAAAICREAMRIAAELCVYTNDQLVIEEL 182
>gi|313884886|ref|ZP_07818638.1| ATP-dependent protease HslVU, peptidase subunit [Eremococcus
coleocola ACS-139-V-Col8]
gi|312619577|gb|EFR31014.1| ATP-dependent protease HslVU, peptidase subunit [Eremococcus
coleocola ACS-139-V-Col8]
Length = 175
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 87/173 (50%), Positives = 128/173 (73%), Gaps = 4/173 (2%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI VRKD + +AGDGQV++G+TV MK ARK+RR+ ++ GFAG ADA TL E
Sbjct: 2 TTICAVRKDNQLAMAGDGQVTMGETVIMKGGARKLRRIYDDKVVVGFAGGVADAITLSEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E+KL + QL+R+++E+AK WR D+ L+ LEA++++ D L+++G G+V+EP++GV
Sbjct: 62 FEEKLRSHQGQLVRAAIEVAKQWRTDRSLQKLEALLIVMDNKDLLMVSGTGEVIEPDDGV 121
Query: 135 MAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
+ IGSGG+YAL+AARA++ + AEEIAR+A+ IA+ I VYTN NI++E+
Sbjct: 122 LTIGSGGNYALAAARAMLRQGNPDLKAEEIAREALLIASQIDVYTNDNILVES 174
>gi|47094601|ref|ZP_00232246.1| ATP-dependent protease HslV [Listeria monocytogenes str. 4b H7858]
gi|47017025|gb|EAL07913.1| ATP-dependent protease HslV [Listeria monocytogenes str. 4b H7858]
Length = 164
Score = 244 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 89/163 (54%), Positives = 120/163 (73%), Gaps = 4/163 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V+ DG +AGDGQV+LG++V MK A+KVRRL +IAGFAGS ADAF
Sbjct: 1 MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
TL E+ E KL +Y L R+SVELA+ WR D LR LEAM+++ DK L+++G G+V+E
Sbjct: 61 TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 120
Query: 130 PENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIA 169
P++G++AIGSGG+YAL+A RAL Q A++IAR A+ IA
Sbjct: 121 PDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIA 163
>gi|254779463|ref|YP_003057568.1| ATP-dependent protease peptidase subunit [Helicobacter pylori B38]
gi|254001374|emb|CAX29359.1| ATP-dependent protease HslV [Helicobacter pylori B38]
Length = 180
Score = 244 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R G +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHIFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG+YALSAARAL ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|188586010|ref|YP_001917555.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
family T01B [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350697|gb|ACB84967.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
family T01B [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 181
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 86/180 (47%), Positives = 125/180 (69%), Gaps = 2/180 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TTI + D IAGDGQ+++G T+ K +A+K+ +L KG ++AGFAGS ADA TL
Sbjct: 2 LDGTTIAACKTDKGTAIAGDGQITMGQNTIFKQSAKKIWKLYKGEVLAGFAGSVADAMTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
ER E KLEQ L ++SVELAK+WR DK LR LEA++L+A+ +I+G G+++EP+
Sbjct: 62 FERFEHKLEQEKGNLSKASVELAKEWRSDKVLRRLEALLLVANLDKMFIISGSGEIIEPD 121
Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
+ V AIGSGG+YALSA + L + + E+A +A++ AA+ICVYTN +I +E L+ +
Sbjct: 122 DNVAAIGSGGAYALSALKMLSKHSDLAPGEMACEALNTAAEICVYTNSHISVEELRAQGD 181
>gi|262401962|ref|ZP_06078527.1| ATP-dependent protease HslV [Vibrio sp. RC586]
gi|262351934|gb|EEZ01065.1| ATP-dependent protease HslV [Vibrio sp. RC586]
Length = 156
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 83/149 (55%), Positives = 115/149 (77%), Gaps = 1/149 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK NARKVRRL ++AGFAG +ADAFTL ER E KL+ + L +++VELAKDWR D+
Sbjct: 1 MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+T++L+ITG GDVL+PE+ ++AIGSGG+YA +AA AL+ +T+ A
Sbjct: 61 ALRRLEAILAVADETVSLIITGNGDVLQPEHDLIAIGSGGNYAQAAAIALLENTELDART 120
Query: 161 IARKAMSIAADICVYTNHNIVLETLKVGD 189
IA KA++IA DICV+TNH+ +E L++
Sbjct: 121 IAEKALNIAGDICVFTNHHHTIEELEIPQ 149
>gi|78046248|ref|YP_362423.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|289664008|ref|ZP_06485589.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
pv. vasculorum NCPPB702]
gi|325918372|ref|ZP_08180503.1| HslV component of HslUV peptidase [Xanthomonas vesicatoria ATCC
35937]
gi|325925417|ref|ZP_08186816.1| HslV component of HslUV peptidase [Xanthomonas perforans 91-118]
gi|325928768|ref|ZP_08189937.1| HslV component of HslUV peptidase [Xanthomonas perforans 91-118]
gi|123585935|sp|Q3BXU0|HSLV_XANC5 RecName: Full=ATP-dependent protease subunit HslV
gi|78034678|emb|CAJ22323.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|325535395|gb|EGD07260.1| HslV component of HslUV peptidase [Xanthomonas vesicatoria ATCC
35937]
gi|325540849|gb|EGD12422.1| HslV component of HslUV peptidase [Xanthomonas perforans 91-118]
gi|325544177|gb|EGD15561.1| HslV component of HslUV peptidase [Xanthomonas perforans 91-118]
Length = 183
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 102/184 (55%), Positives = 139/184 (75%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1 MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+
Sbjct: 61 GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119
Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGGSY +A L T+ A+ IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVV 179
Query: 182 LETL 185
+E L
Sbjct: 180 VEEL 183
>gi|108562914|ref|YP_627230.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
HPAG1]
gi|123247001|sp|Q1CU16|HSLV_HELPH RecName: Full=ATP-dependent protease subunit HslV
gi|107836687|gb|ABF84556.1| heat shock protein [Helicobacter pylori HPAG1]
gi|317009509|gb|ADU80089.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
India7]
gi|317012331|gb|ADU82939.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
Lithuania75]
Length = 180
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R G +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG+YALSAARAL ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|124516259|gb|EAY57767.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit HslV
[Leptospirillum rubarum]
gi|206603100|gb|EDZ39580.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Leptospirillum sp. Group II '5-way CG']
Length = 180
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 86/172 (50%), Positives = 125/172 (72%), Gaps = 1/172 (0%)
Query: 19 LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
++VR+ V + GDGQ++LG ++KA +RKVR L +G ++AGFAGS+ADA TL ER E
Sbjct: 1 MSVRRGDRVALGGDGQITLGTMIVKARSRKVRSLYQGRVLAGFAGSTADALTLFERFESM 60
Query: 79 LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIG 138
LE + + R+SV LAKDWR D+ LR LEA++ +A K T +I+G GDV+EPE G+++IG
Sbjct: 61 LESHQGHVGRASVALAKDWRTDRSLRRLEALLAVASKESTYLISGAGDVIEPEEGLLSIG 120
Query: 139 SGGSYALSAAR-ALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
SG SYAL++AR L T + EEI R+++S+AAD+ +YTNH + + +L G+
Sbjct: 121 SGSSYALASARVLLKHTALTPEEIVRESLSVAADLDIYTNHEMTVLSLPSGE 172
>gi|308063689|gb|ADO05576.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
Sat464]
Length = 180
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 117/179 (65%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R G +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG+YALSAARAL + ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDNFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|261211241|ref|ZP_05925530.1| ATP-dependent protease HslV [Vibrio sp. RC341]
gi|260839742|gb|EEX66353.1| ATP-dependent protease HslV [Vibrio sp. RC341]
Length = 156
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 83/149 (55%), Positives = 114/149 (76%), Gaps = 1/149 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK NARKVRRL ++AGFAG +ADAFTL ER E KL+ + L +++VELAKDWR D+
Sbjct: 1 MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+T +L+ITG GDVL+PE+ ++AIGSGG+YA +AA AL+ +T+ A
Sbjct: 61 ALRRLEAILAVADETASLIITGNGDVLQPEHDLIAIGSGGNYAQAAAIALLENTELDART 120
Query: 161 IARKAMSIAADICVYTNHNIVLETLKVGD 189
IA KA++IA DICV+TNH+ +E L++
Sbjct: 121 IAEKALNIAGDICVFTNHHHTIEELEIPQ 149
>gi|262170080|ref|ZP_06037769.1| ATP-dependent protease HslV [Vibrio cholerae RC27]
gi|262191442|ref|ZP_06049629.1| ATP-dependent protease HslV [Vibrio cholerae CT 5369-93]
gi|262021488|gb|EEY40200.1| ATP-dependent protease HslV [Vibrio cholerae RC27]
gi|262032682|gb|EEY51233.1| ATP-dependent protease HslV [Vibrio cholerae CT 5369-93]
Length = 158
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 83/149 (55%), Positives = 114/149 (76%), Gaps = 1/149 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK NARKVRRL ++AGFAG +ADAFTL ER E KL+ + L +++VELAKDWR D+
Sbjct: 1 MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+T +L+ITG GDVL+PE+ ++AIGSGG+YA +AA AL+ +T+ A
Sbjct: 61 ALRRLEAILAVADETASLIITGNGDVLQPEHDLIAIGSGGNYAQAAAIALLENTELDART 120
Query: 161 IARKAMSIAADICVYTNHNIVLETLKVGD 189
IA KA++IA DICV+TNH+ +E L++
Sbjct: 121 IAEKALNIAGDICVFTNHHHTIEELEIPQ 149
>gi|307637193|gb|ADN79643.1| ATP-dependent protease [Helicobacter pylori 908]
gi|325995782|gb|ADZ51187.1| ATP-dependent protease [Helicobacter pylori 2018]
gi|325997378|gb|ADZ49586.1| ATP-dependent protease peptidase subunit [Helicobacter pylori 2017]
Length = 180
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 81/179 (45%), Positives = 115/179 (64%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK---DGVVV-IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEFDNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHVFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG++ALSAARAL ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|308182669|ref|YP_003926796.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
PeCan4]
gi|308064854|gb|ADO06746.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
PeCan4]
Length = 180
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 115/179 (64%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R G I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFAFIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHVFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG+YALSAARAL ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|229824241|ref|ZP_04450310.1| hypothetical protein GCWU000282_01545 [Catonella morbi ATCC 51271]
gi|229786595|gb|EEP22709.1| hypothetical protein GCWU000282_01545 [Catonella morbi ATCC 51271]
Length = 174
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 84/172 (48%), Positives = 125/172 (72%), Gaps = 3/172 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V+KD + +AGDGQ+++GQ V MK +ARK+RR+ ++ GFAG ADA TL E
Sbjct: 2 TTICAVKKDNQLAMAGDGQITMGQQVIMKGSARKIRRIYHNQVLVGFAGGVADAITLSEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
E KL ++ QL R++VELAK WR D+ L+ LEA++++ DK L+++G G+V+EP++G+
Sbjct: 62 FETKLSEHQGQLTRAAVELAKSWRSDRTLQKLEALLIVMDKENLLMVSGTGEVIEPDDGI 121
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLET 184
+ IGSGG+YAL+AARAL + SA +IA++A+ IA++I V+TN I +E
Sbjct: 122 LTIGSGGNYALAAARALKRNAPELSAVDIAKQALQIASEIDVFTNDQIRVEE 173
>gi|325922227|ref|ZP_08184013.1| HslV component of HslUV peptidase [Xanthomonas gardneri ATCC 19865]
gi|325547297|gb|EGD18365.1| HslV component of HslUV peptidase [Xanthomonas gardneri ATCC 19865]
Length = 183
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 102/184 (55%), Positives = 138/184 (75%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1 MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+
Sbjct: 61 GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119
Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGGSY +A L T+ A+ IA +A+ IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTELDAKTIATEAIHIAGDICIYTNRNVV 179
Query: 182 LETL 185
+E L
Sbjct: 180 VEEL 183
>gi|109947436|ref|YP_664664.1| ATP-dependent protease peptidase subunit [Helicobacter acinonychis
str. Sheeba]
gi|123362637|sp|Q17XG1|HSLV_HELAH RecName: Full=ATP-dependent protease subunit HslV
gi|109714657|emb|CAJ99665.1| heat shock protein [Helicobacter acinonychis str. Sheeba]
Length = 180
Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEFNNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG+YALSAARAL +++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDCFAHLEPKKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|210134716|ref|YP_002301155.1| ATP-dependent protease peptidase subunit [Helicobacter pylori P12]
gi|238065876|sp|B6JL97|HSLV_HELP2 RecName: Full=ATP-dependent protease subunit HslV
gi|210132684|gb|ACJ07675.1| heat shock protein protease subunit [Helicobacter pylori P12]
Length = 180
Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R G I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFAFIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG+YALSAARAL +++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPKKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|294666816|ref|ZP_06732049.1| ATP-dependent protease peptidase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292603400|gb|EFF46818.1| ATP-dependent protease peptidase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 183
Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 103/184 (55%), Positives = 139/184 (75%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1 MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+
Sbjct: 61 GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119
Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGGSY +A L TQ A+ IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTQLDAKTIAAEAINIAGDICIYTNRNVV 179
Query: 182 LETL 185
+E L
Sbjct: 180 VEEL 183
>gi|203284217|ref|YP_002221957.1| hypothetical protein BDU_299 [Borrelia duttonii Ly]
gi|238690558|sp|B5RLC2|HSLV_BORDL RecName: Full=ATP-dependent protease subunit HslV
gi|201083660|gb|ACH93251.1| hslV gene product [Borrelia duttonii Ly]
Length = 180
Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 92/179 (51%), Positives = 130/179 (72%), Gaps = 4/179 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TT++ +R+ G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA T
Sbjct: 1 MNFKGTTVIAIRRAGKTVVAADGQVTFGYTVLKSNAVKIRKLVNGKILAGFAGSTSDAIT 60
Query: 71 LLERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
L E+ E+K++ + + R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV
Sbjct: 61 LFEKFEEKVKSREDGIIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSDNILLISGTGDV 120
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+EPE V++IGSGG+YA SAA A M + + SA +IA KA+ IAA +C+YTN NIVLE +
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAADIAFKALKIAARVCIYTNSNIVLEEI 179
>gi|294625643|ref|ZP_06704266.1| ATP-dependent protease peptidase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292600066|gb|EFF44180.1| ATP-dependent protease peptidase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 183
Score = 243 bits (622), Expect = 8e-63, Method: Composition-based stats.
Identities = 102/184 (55%), Positives = 138/184 (75%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1 MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KL+++ L R++VELAKDWR ++ L LEA++ +ADK +L+I+
Sbjct: 61 GAAADAFTLFELFEAKLDKH-GHLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119
Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGGSY +A L TQ A+ IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTQLDAKTIAAEAINIAGDICIYTNRNVV 179
Query: 182 LETL 185
+E L
Sbjct: 180 VEEL 183
>gi|261839653|gb|ACX99418.1| ATP-dependent protease peptidase subunit [Helicobacter pylori 52]
gi|308061842|gb|ADO03730.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
Cuz20]
Length = 180
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R G +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG++ALSAARAL + ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDNFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|15606773|ref|NP_214153.1| ATP-dependent protease peptidase subunit [Aquifex aeolicus VF5]
gi|11132846|sp|O67587|HSLV_AQUAE RecName: Full=ATP-dependent protease subunit HslV
gi|2984006|gb|AAC07551.1| heat shock protein HsLV [Aquifex aeolicus VF5]
Length = 176
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 93/176 (52%), Positives = 128/176 (72%), Gaps = 1/176 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+++ ATTIL VR+DG + GDGQV+LG +V+K ARK+R+L KG +I GFAGS+AD
Sbjct: 1 MEVKATTILAVRRDGKTAVGGDGQVTLGSSVIKHTARKIRKLYKGQVIVGFAGSAADGLA 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L+ERLE KLE+Y LL++SV+LAKDWRMDKYLR LEA++L D+ L+I+G GD++EP
Sbjct: 61 LMERLEAKLEEYRGNLLKASVQLAKDWRMDKYLRRLEALLLAVDREHMLLISGNGDIIEP 120
Query: 131 ENGVMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ V+AIGSGG +A +T SA EI K++ IA++IC+YTN V+E +
Sbjct: 121 DEPVLAIGSGGDYARAAALALYRNTDLSAREIVEKSLKIASEICIYTNDKFVIEEI 176
>gi|208434437|ref|YP_002266103.1| heat shock protein [Helicobacter pylori G27]
gi|217032970|ref|ZP_03438443.1| hypothetical protein HPB128_141g3 [Helicobacter pylori B128]
gi|298736226|ref|YP_003728752.1| HslV [Helicobacter pylori B8]
gi|238065879|sp|B5Z6N8|HSLV_HELPG RecName: Full=ATP-dependent protease subunit HslV
gi|208432366|gb|ACI27237.1| heat shock protein [Helicobacter pylori G27]
gi|216945299|gb|EEC23974.1| hypothetical protein HPB128_141g3 [Helicobacter pylori B128]
gi|298355416|emb|CBI66288.1| HslV [Helicobacter pylori B8]
Length = 180
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 84/179 (46%), Positives = 117/179 (65%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R G +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++GMGDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGMGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG+YALSAARAL ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|15611531|ref|NP_223182.1| ATP-dependent protease peptidase subunit [Helicobacter pylori J99]
gi|11133263|sp|Q9ZLW2|HSLV_HELPJ RecName: Full=ATP-dependent protease subunit HslV
gi|4155004|gb|AAD06045.1| HEAT SHOCK PROTEIN [Helicobacter pylori J99]
Length = 180
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 81/179 (45%), Positives = 115/179 (64%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK---DGVVV-IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEFDNKKFALIGGDGQVTLGNCVVKANAIKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHVFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG++ALSAARAL ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|261838241|gb|ACX98007.1| heat shock protein, protease subunit [Helicobacter pylori 51]
Length = 180
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R G +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNRVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG++ALSAARAL + ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDNFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|188527648|ref|YP_001910335.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
Shi470]
gi|238691931|sp|B2UTX3|HSLV_HELPS RecName: Full=ATP-dependent protease subunit HslV
gi|188143888|gb|ACD48305.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
Shi470]
Length = 180
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 84/179 (46%), Positives = 117/179 (65%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R G +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG+YALSAARAL S ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDSFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|21241408|ref|NP_640990.1| ATP-dependent protease peptidase subunit [Xanthomonas axonopodis
pv. citri str. 306]
gi|24211779|sp|Q8PPP8|HSLV_XANAC RecName: Full=ATP-dependent protease subunit HslV
gi|21106743|gb|AAM35526.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
axonopodis pv. citri str. 306]
Length = 183
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 103/184 (55%), Positives = 139/184 (75%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1 MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+
Sbjct: 61 GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119
Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGGSY +A L TQ A+ IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVVEPEDGIIAIGSGGSYALSAARALLAHTQLDAKTIAAEAINIAGDICIYTNRNVV 179
Query: 182 LETL 185
+E L
Sbjct: 180 VEEL 183
>gi|51598556|ref|YP_072744.1| ATP-dependent protease peptidase subunit [Borrelia garinii PBi]
gi|85542198|sp|Q661W9|HSLV_BORGA RecName: Full=ATP-dependent protease subunit HslV
gi|51573127|gb|AAU07152.1| heat shock protein [Borrelia garinii PBi]
Length = 182
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 91/180 (50%), Positives = 132/180 (73%), Gaps = 4/180 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TT++ ++K+G V+A DGQV G TV+K+NA K+R+L G I+AGFAGS++DA T
Sbjct: 1 MGFKGTTVIAIKKNGKTVVAADGQVLFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60
Query: 71 LLERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
L E+ E+K++ + L+ R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV
Sbjct: 61 LFEKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSKNILLISGTGDV 120
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+EPE V++IGSGG+YA SAA A M + + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180
>gi|289667445|ref|ZP_06488520.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
pv. musacearum NCPPB4381]
Length = 183
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 101/184 (54%), Positives = 137/184 (74%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1 MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+
Sbjct: 61 GAAADAFTLFGLFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119
Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGGSY +A L T+ A IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTELDARTIATEAINIAGDICIYTNRNVV 179
Query: 182 LETL 185
+E L
Sbjct: 180 VEEL 183
>gi|317013932|gb|ADU81368.1| ATP-dependent protease subunit HslV [Helicobacter pylori
Gambia94/24]
Length = 180
Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats.
Identities = 82/179 (45%), Positives = 116/179 (64%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK---DGVVV-IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R + I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEFDNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++GMGDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHVFILSGMGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG++ALSAARAL ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|262041702|ref|ZP_06014894.1| ATP-dependent protease HslVU [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330004457|ref|ZP_08304951.1| ATP-dependent protease HslVU, peptidase subunit [Klebsiella sp. MS
92-3]
gi|259040964|gb|EEW42043.1| ATP-dependent protease HslVU [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328536615|gb|EGF62942.1| ATP-dependent protease HslVU, peptidase subunit [Klebsiella sp. MS
92-3]
Length = 149
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 82/145 (56%), Positives = 109/145 (75%), Gaps = 1/145 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK N +KVRRL +IAGFAG +ADAFTL E E+KLE + L++++VELAKDWR D+
Sbjct: 1 MKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSGG YA +AARAL+ +T A +
Sbjct: 61 MLRKLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTDMGARD 120
Query: 161 IARKAMSIAADICVYTNHNIVLETL 185
IA KA+ IA DIC+YTNH +E L
Sbjct: 121 IAEKALDIAGDICIYTNHFHTIEEL 145
>gi|152993267|ref|YP_001358988.1| ATP-dependent protease peptidase subunit [Sulfurovum sp. NBC37-1]
gi|166223004|sp|A6QAX2|HSLV_SULNB RecName: Full=ATP-dependent protease subunit HslV
gi|151425128|dbj|BAF72631.1| ATP-dependent protease HslVU, peptidase subunit HslV [Sulfurovum
sp. NBC37-1]
Length = 176
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 82/175 (46%), Positives = 118/175 (67%), Gaps = 2/175 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
ATTIL + DG VI GDGQV+ G TV+K+NA K+R L +G I+AGFAGS+ADAF L
Sbjct: 2 FDATTILGYKADGKAVIGGDGQVTFGDTVLKSNATKIRTLYEGKILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E L + L +S + +K WR DK+LR LEAM+++ + +++G GDV+EP++
Sbjct: 62 DMFEGILAEKRGDLFKSVIGFSKMWRKDKHLRQLEAMMIVLNTEHIFILSGTGDVVEPQD 121
Query: 133 G-VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETL 185
G + AIGSGG+YA+SAARAL E+ ++++ +A D+C+YTN NI + L
Sbjct: 122 GKIAAIGSGGNYAISAARALDKHANLEPRELVQESLEVAGDLCIYTNKNIKILEL 176
>gi|317177647|dbj|BAJ55436.1| ATP-dependent protease peptidase subunit [Helicobacter pylori F16]
Length = 180
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R G I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFAFIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG++ALSAARAL S ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|315586804|gb|ADU41185.1| ATP-dependent protease HslVU [Helicobacter pylori 35A]
gi|332673694|gb|AEE70511.1| ATP-dependent protease HslVU [Helicobacter pylori 83]
Length = 180
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 117/179 (65%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R G +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG++ALSAARAL S ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|145640469|ref|ZP_01796053.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
R3021]
gi|145275055|gb|EDK14917.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
22.4-21]
Length = 150
Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats.
Identities = 94/149 (63%), Positives = 121/149 (81%), Gaps = 2/149 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR+ G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRKGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-V 134
E+KLE + LL+S+VELAKDWR D+ LR LEAM+++AD+ +L+ITG+GDV++PE +
Sbjct: 62 ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121
Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIA 162
+AIGSGG+YALSAARAL+ +T+ SA EI
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAXEIC 150
>gi|317181835|dbj|BAJ59619.1| ATP-dependent protease peptidase subunit [Helicobacter pylori F57]
Length = 180
Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 118/179 (65%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R G +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E+ LE L +S V+ +K+WR DKYLR LEAM+++ + +++GMGDVL
Sbjct: 62 FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGMGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG++ALSAARAL + ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDNFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|203287756|ref|YP_002222771.1| heat shock protein [Borrelia recurrentis A1]
gi|238690589|sp|B5RRB6|HSLV_BORRA RecName: Full=ATP-dependent protease subunit HslV
gi|201084976|gb|ACH94550.1| heat shock protein [Borrelia recurrentis A1]
Length = 180
Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 92/179 (51%), Positives = 130/179 (72%), Gaps = 4/179 (2%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TT++ +R+ G V+A DGQV+ G TV+K+NA K+R+L G I+AGFAGS++DA T
Sbjct: 1 MNFKGTTVIAIRRAGKTVVAADGQVTFGYTVLKSNAVKIRKLVNGKILAGFAGSTSDAIT 60
Query: 71 LLERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
L E+ E+K++ + + R++V+LAKDWR DK L LEAM+L+AD L+I+G GDV
Sbjct: 61 LFEKFEEKVKSREDGIIDIKRAAVDLAKDWRADKILHKLEAMMLVADSDNILLISGTGDV 120
Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+EPE V++IGSGG+YA SAA A M + + SA +IA KA+ IAA +C+YTN NIVLE +
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAADIAFKALKIAARVCIYTNSNIVLEEI 179
>gi|291276926|ref|YP_003516698.1| putative ATP-dependent protease [Helicobacter mustelae 12198]
gi|290964120|emb|CBG39964.1| putative ATP-dependent protease [Helicobacter mustelae 12198]
Length = 174
Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 78/162 (48%), Positives = 112/162 (69%), Gaps = 2/162 (1%)
Query: 27 VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
++ GDGQV+ G V+K+NA K+R+L I++GFAGS+ADAF L + E+ LE L
Sbjct: 13 AIVGGDGQVTFGNCVLKSNATKIRKLYNNRILSGFAGSTADAFWLFDMFEQILENKKGDL 72
Query: 87 LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-VMAIGSGGSYAL 145
+R +E +K WR DKYLR LEAM+++ DK +++G GDV+EPE+ + +IGSGG+YAL
Sbjct: 73 VRGVLEFSKLWRKDKYLRKLEAMMIVLDKDHIFILSGTGDVVEPEDNKIASIGSGGNYAL 132
Query: 146 SAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
SAARAL T E+ + A++IA +IC+YTN NI + L+
Sbjct: 133 SAARALDRFTSLHPRELVQNALNIAGEICIYTNTNIKILELE 174
>gi|284008946|emb|CBA75817.1| ATP-dependent protease HslV (heat shock protein) [Arsenophonus
nasoniae]
Length = 154
Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 87/151 (57%), Positives = 116/151 (76%), Gaps = 1/151 (0%)
Query: 37 LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD 96
+G TVMK N RKVRRL +IAGFAG +ADAFTL E E+KLE + L +++VELAKD
Sbjct: 1 MGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELFERKLELHQGHLTKAAVELAKD 60
Query: 97 WRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQ 155
WR D+ LR LEA++ +AD+ +L+ITG GDV++PEN ++AIGSGG+YA +AARAL+ +T+
Sbjct: 61 WRTDRMLRKLEALLAVADENSSLIITGNGDVIQPENDLIAIGSGGAYAQAAARALLENTE 120
Query: 156 NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
SA +I KA++IA+DIC+YTNHN E L
Sbjct: 121 MSARDITEKALNIASDICIYTNHNFNFEELS 151
>gi|296504325|ref|YP_003666025.1| ATP-dependent protease peptidase [Bacillus thuringiensis BMB171]
gi|296325377|gb|ADH08305.1| ATP-dependent protease peptidase [Bacillus thuringiensis BMB171]
Length = 153
Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 86/153 (56%), Positives = 116/153 (75%), Gaps = 4/153 (2%)
Query: 37 LGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAK 95
+G VMK ARKVR+L +G ++AGFAGS ADAFTL E E KLE+Y L R++VE+AK
Sbjct: 1 MGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTLFEMFEGKLEEYNGNLQRAAVEMAK 60
Query: 96 DWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST- 154
WR DK LR LEAM+++ DKT L+++G G+V+EP++G++AIGSGG+YALSA RAL
Sbjct: 61 QWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPDDGILAIGSGGNYALSAGRALKQYA 120
Query: 155 --QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 121 SEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 153
>gi|317179118|dbj|BAJ56906.1| ATP-dependent protease peptidase subunit [Helicobacter pylori F30]
Length = 180
Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R G +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEIGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFECILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG++ALSAARAL S ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|317180291|dbj|BAJ58077.1| ATP-dependent protease peptidase subunit [Helicobacter pylori F32]
Length = 180
Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 6/179 (3%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
ATTIL R G +I GDGQV+LG V+KANA K+R L +++GFAGS+ADA
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F+L + E LE L +S V+ +K+WR DKYLR LEAM+++ + +++G GDVL
Sbjct: 62 FSLFDMFECILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121
Query: 129 EPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
E E+ + AIGSGG++ALSAARAL S ++ +++ IA D+C+YTN NI + L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180
>gi|160903078|ref|YP_001568659.1| ATP-dependent protease peptidase subunit [Petrotoga mobilis SJ95]
gi|189036230|sp|A9BI45|HSLV_PETMO RecName: Full=ATP-dependent protease subunit HslV
gi|160360722|gb|ABX32336.1| 20S proteasome A and B subunits [Petrotoga mobilis SJ95]
Length = 177
Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 91/177 (51%), Positives = 127/177 (71%), Gaps = 1/177 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H TTIL V+++G VI GDGQV++G+T+ K NA+KVRRLG+G +I+GFAGS ADA
Sbjct: 1 MDFHGTTILGVKRNGKTVICGDGQVTMGETIFKGNAKKVRRLGEGKVISGFAGSVADALA 60
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L ER E K + L++++VEL K+WRMDK LR LEA++L+ADK +I+G G+V+EP
Sbjct: 61 LYERFEGKYKSSHGNLMKAAVELTKEWRMDKALRRLEALLLVADKENIFLISGNGEVMEP 120
Query: 131 ENGVMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ +AIGSGG +A L +T AEEIA+KA+ IA +IC+YTN NI +E ++
Sbjct: 121 QEDAIAIGSGGPYAYAAAMALLRNTDLDAEEIAQKAIKIAGEICIYTNDNITMEIIE 177
>gi|254516117|ref|ZP_05128177.1| ATP-dependent protease HslV [gamma proteobacterium NOR5-3]
gi|219675839|gb|EED32205.1| ATP-dependent protease HslV [gamma proteobacterium NOR5-3]
Length = 156
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 87/155 (56%), Positives = 116/155 (74%), Gaps = 1/155 (0%)
Query: 37 LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD 96
+G T+MK NARKVRRL K ++AGFAG +ADAFTL E E +LE++ QL+R++VELAK
Sbjct: 1 MGNTIMKGNARKVRRLYKDQVLAGFAGGTADAFTLFELFEAQLEKHNGQLVRAAVELAKA 60
Query: 97 WRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQ 155
WR ++ LR LEA++ +ADK +LVI+G GDV+EPEN ++AIGSGGS+A +AA AL+ +TQ
Sbjct: 61 WRTERSLRQLEALLAVADKETSLVISGNGDVIEPENNLIAIGSGGSFAQAAAMALLDNTQ 120
Query: 156 NSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
SA EI K + IAADIC+YTN +E L +
Sbjct: 121 LSAREIVEKGLGIAADICIYTNEQRTIEQLDYETD 155
>gi|168703140|ref|ZP_02735417.1| ATP-dependent protease peptidase subunit [Gemmata obscuriglobus UQM
2246]
Length = 178
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 93/176 (52%), Positives = 127/176 (72%), Gaps = 1/176 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++ ATTIL VR I GDGQV+LG VMKA+ARKVR+L G ++AGFAG++ADAF+L
Sbjct: 3 RIRATTILAVRTSNGAAIGGDGQVTLGNIVMKADARKVRKLYDGKVLAGFAGAAADAFSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
L+R E+KL + + +++ ELAK+WR D+ LR LEAM+++ D+ L+++G GDV+ P
Sbjct: 63 LDRFEQKLRDFQGSVPKAATELAKEWRTDRILRRLEAMLVVLDRDNLLLVSGTGDVISPT 122
Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ V+AIGSGG YALSAARALM TQ EI R + IA D+C+YTN NI ++ L
Sbjct: 123 DNVLAIGSGGPYALSAARALMQHTQLKPAEIVRAGLEIAGDLCIYTNRNIDVQELS 178
>gi|304384960|ref|ZP_07367306.1| ATP-dependent protease HslVU [Pediococcus acidilactici DSM 20284]
gi|304329154|gb|EFL96374.1| ATP-dependent protease HslVU [Pediococcus acidilactici DSM 20284]
Length = 189
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 87/181 (48%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFA 62
M + VK ATTI+ + +G +AGDGQV++G+ +MK ARKVRR+ G +I GFA
Sbjct: 1 MKENIMPVKFDATTIIAINHNGENAMAGDGQVTMGEKFIMKGTARKVRRIYDGKVIVGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
GS ADAF L E+ EKKL +Y L R+SVELAK WR D+ L+ LEAM+++ D+ +++
Sbjct: 61 GSVADAFNLEEKFEKKLSEYSGNLQRASVELAKIWRGDQQLQKLEAMLIVMDQKEMYLVS 120
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNI 180
G G+V+ P++G++AIGSGG++AL+AA+AL +A+EIA+ A+++A DI ++TNHN+
Sbjct: 121 GSGEVIAPDDGILAIGSGGNFALAAAKALKQHAKDMTAKEIAKTAINVAGDIDIFTNHNV 180
Query: 181 V 181
+
Sbjct: 181 I 181
>gi|303272345|ref|XP_003055534.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463508|gb|EEH60786.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 230
Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats.
Identities = 105/178 (58%), Positives = 131/178 (73%), Gaps = 2/178 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATT+L VRK VV+ DGQV+LG V+K N +KVRRL G + AG++ADAFTL E
Sbjct: 28 HATTVLCVRKGDEVVVMADGQVTLGSQVIKPNVKKVRRLSGGVVGGF-AGATADAFTLFE 86
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
RLE KLE++P QL R++VELAK WR DKYLR LEA +++ADK T ITG GDV+EP +G
Sbjct: 87 RLEMKLEEHPGQLTRAAVELAKAWRNDKYLRRLEATMIVADKDHTFQITGGGDVIEPHDG 146
Query: 134 VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
V+ IGSGGS+A +AARALM A +IA K+M+IAAD CVYTNHN + ET+ D+
Sbjct: 147 VVGIGSGGSFATAAARALMDIDGMDALKIATKSMNIAADACVYTNHNFITETIGPNDD 204
>gi|58428210|gb|AAW77247.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
oryzae pv. oryzae KACC10331]
Length = 190
Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 100/184 (54%), Positives = 137/184 (74%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 8 MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 67
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+
Sbjct: 68 GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 126
Query: 123 GMGDVLEPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGG +A L T+ A+ IA +A++IA DIC+YTN N+V
Sbjct: 127 GTGDVIEPEDGIIAIGSGGAYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVV 186
Query: 182 LETL 185
+E L
Sbjct: 187 VEEL 190
>gi|304320678|ref|YP_003854321.1| Multispecific proteasome protease [Parvularcula bermudensis
HTCC2503]
gi|303299580|gb|ADM09179.1| Multispecific proteasome protease [Parvularcula bermudensis
HTCC2503]
Length = 180
Score = 239 bits (612), Expect = 9e-62, Method: Composition-based stats.
Identities = 97/176 (55%), Positives = 132/176 (75%), Gaps = 6/176 (3%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTIL V++ V + GDGQV+LG+ V+ K +A+KVRRL G +++GFAG +ADAFTLLER
Sbjct: 2 TTILAVQRGREVAVGGDGQVTLGERVVSKGDAKKVRRLADGAVLSGFAGGTADAFTLLER 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN-- 132
LE KLEQY QLLRS+VELAKDWR D+YLR LEAM+++AD + L+++G+GDV+EPE
Sbjct: 62 LEGKLEQYRGQLLRSAVELAKDWRTDRYLRRLEAMLIVADASQMLMVSGLGDVIEPEKTG 121
Query: 133 --GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
G++AIGSGGSY +A +T SA EI K++ IA+ + V+TN +++ETL
Sbjct: 122 DVGILAIGSGGSYAQAAATALAQNTDLSAREIVEKSLIIASGLDVFTNDRLIVETL 177
>gi|84625421|ref|YP_452793.1| ATP-dependent protease peptidase subunit [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|122879308|ref|YP_202632.6| ATP-dependent protease peptidase subunit [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|229358032|ref|YP_001912064.2| ATP-dependent protease peptidase subunit [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|123520883|sp|Q2NYV8|HSLV_XANOM RecName: Full=ATP-dependent protease subunit HslV
gi|84369361|dbj|BAE70519.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
oryzae pv. oryzae MAFF 311018]
Length = 183
Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 100/184 (54%), Positives = 137/184 (74%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1 MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I+
Sbjct: 61 GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119
Query: 123 GMGDVLEPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGG +A L T+ A+ IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGAYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVV 179
Query: 182 LETL 185
+E L
Sbjct: 180 VEEL 183
>gi|270290226|ref|ZP_06196451.1| ATP-dependent protease hslV [Pediococcus acidilactici 7_4]
gi|270281007|gb|EFA26840.1| ATP-dependent protease hslV [Pediococcus acidilactici 7_4]
Length = 184
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 86/175 (49%), Positives = 128/175 (73%), Gaps = 3/175 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADA 68
VK ATTI+ + +G +AGDGQV++G+ +MK ARKVRR+ G +I GFAGS ADA
Sbjct: 2 PVKFDATTIIAINHNGENAMAGDGQVTMGEKFIMKGTARKVRRIYDGKVIVGFAGSVADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F L E+ EKKL +Y L R+SVELAK WR D+ L+ LEAM+++ D+ +++G G+V+
Sbjct: 62 FNLEEKFEKKLSEYSGNLQRASVELAKIWRGDQQLQKLEAMLIVMDQKEMYLVSGSGEVI 121
Query: 129 EPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIV 181
P++G++AIGSGG++AL+AA+AL +A+EIA+ A+++A DI ++TNHN++
Sbjct: 122 APDDGILAIGSGGNFALAAAKALKQHAKDMTAKEIAKTAINVAGDIDIFTNHNVI 176
>gi|116492726|ref|YP_804461.1| ATP-dependent protease peptidase subunit [Pediococcus pentosaceus
ATCC 25745]
gi|122265810|sp|Q03FK3|HSLV_PEDPA RecName: Full=ATP-dependent protease subunit HslV
gi|116102876|gb|ABJ68019.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
MEROPS family T01B [Pediococcus pentosaceus ATCC 25745]
Length = 184
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 86/183 (46%), Positives = 128/183 (69%), Gaps = 3/183 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADA 68
VK ATTI+ + +G +AGDGQV++G+ +MK ARKVRR+ G +I GFAGS ADA
Sbjct: 2 PVKFDATTIIAISHNGENAMAGDGQVTMGEKFIMKGTARKVRRIYDGKVIVGFAGSVADA 61
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F L E+ EKKL +Y L R+SVELAK WR D+ L+ LEAM+++ D+ +++G G+V+
Sbjct: 62 FNLEEKFEKKLSEYSGNLQRASVELAKIWRGDQQLQKLEAMLIVMDEKEMYLVSGSGEVI 121
Query: 129 EPENGVMAIGSGGSY--ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
P++G++AIGSGG++ A + A +TQ SA+E+A+ A+++A DI ++TNHN++ K
Sbjct: 122 APDDGILAIGSGGNFALAAAKALKKHATQVSAKEMAKTAINVAGDIDIFTNHNVIALDFK 181
Query: 187 VGD 189
D
Sbjct: 182 EED 184
>gi|149919852|ref|ZP_01908328.1| ATP-dependent protease peptidase subunit [Plesiocystis pacifica
SIR-1]
gi|149819299|gb|EDM78732.1| ATP-dependent protease peptidase subunit [Plesiocystis pacifica
SIR-1]
Length = 179
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 82/177 (46%), Positives = 121/177 (68%), Gaps = 1/177 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ +TT+L VR+DG V + DGQVS+G T++K +A KVR L +G I+AGFAGS+AD TL
Sbjct: 2 IRSTTVLCVRRDGRVALGADGQVSMGNTIVKGSASKVRALARGKILAGFAGSAADGLTLC 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E LE KLE R+ VELAKDWR+D+ R LEA++++ADK +L+++G GDV+E E+
Sbjct: 62 ELLEAKLEAVGGNFTRACVELAKDWRLDRRYRRLEALLIVADKDRSLLLSGTGDVIEAED 121
Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
G++AIGSGG+Y +A L ++ A + + +A +ICV+TNH+ + L+
Sbjct: 122 GILAIGSGGNYALAAARALLRHSEMDARGLVEAGLQVAGEICVFTNHSATVLELEAN 178
>gi|297566079|ref|YP_003685051.1| 20S proteasome subunits A/B [Meiothermus silvanus DSM 9946]
gi|296850528|gb|ADH63543.1| 20S proteasome A and B subunits [Meiothermus silvanus DSM 9946]
Length = 182
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 93/179 (51%), Positives = 127/179 (70%), Gaps = 2/179 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAFT 70
MHATTIL VRK+G IAGDGQV+LGQT+MK +A KVRRL G+ I+ GFAG+ ADA T
Sbjct: 3 PMHATTILAVRKNGQTAIAGDGQVTLGQTIMKTSAIKVRRLEVGSGILVGFAGAVADALT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LLE+ E+ L L R++VE K WR D+ LRNLEAM+++AD L+++G G+VL P
Sbjct: 63 LLEKFEEALGIAKGNLPRAAVETVKRWRTDRVLRNLEAMLIVADVENLLLLSGNGEVLSP 122
Query: 131 ENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+ V+A+GSGG YALSAA+AL+ ++ A +IAR+++ IA +I +YT N + + G
Sbjct: 123 DEPVLAVGSGGPYALSAAKALLRYSELPAADIARESIQIAGEIDLYTTGNPTVLVVGEG 181
>gi|269792952|ref|YP_003317856.1| 20S proteasome A and B subunits [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100587|gb|ACZ19574.1| 20S proteasome A and B subunits [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 178
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 94/174 (54%), Positives = 128/174 (73%), Gaps = 2/174 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TT++ VR+ G V +AGDGQV+LG V+K ARKVRRL K +++AGFAGS+ADA TL
Sbjct: 4 LKGTTVVCVRRGGRVAMAGDGQVTLGAQVVKTRARKVRRL-KWDVLAGFAGSTADAMTLF 62
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E+ L+ + +LR+SVEL K+WR D+ LR LEAM+L+AD TL+++G GDVLE E
Sbjct: 63 ERFERALDAHKGDVLRASVELVKEWRTDRVLRRLEAMMLVADLDRTLLLSGAGDVLEMEE 122
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+IGSG YAL+AARAL+ T A +AR+++ IAA+IC+YTN N+ LE +
Sbjct: 123 MCASIGSGSGYALAAARALLEGTDWDAPAVARRSLEIAAEICIYTNSNVTLEEI 176
>gi|294102501|ref|YP_003554359.1| 20S proteasome A and B subunits [Aminobacterium colombiense DSM
12261]
gi|293617481|gb|ADE57635.1| 20S proteasome A and B subunits [Aminobacterium colombiense DSM
12261]
Length = 180
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 98/174 (56%), Positives = 132/174 (75%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTIL VR++ V +AGDGQV+LG ++KA ARKVRRL KG ++AGFAGS+ADA TLL
Sbjct: 5 FKGTTILCVRQENSVAMAGDGQVTLGDQIIKAGARKVRRLYKGKVLAGFAGSTADAMTLL 64
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E +LE+ L+R++V L K+WR+D+ LR LEA++L+AD+ TL+++G GDVLEPEN
Sbjct: 65 ERFEARLEENSGDLMRAAVSLVKEWRLDRALRKLEALMLVADEEHTLLLSGAGDVLEPEN 124
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V AIGSG +AL+AARA M + A +IAR+A+ IAADIC+YT+ I +E +
Sbjct: 125 NVAAIGSGAGFALAAARAFMESSDKKASDIARRAIEIAADICIYTDKEITVEVI 178
>gi|253583754|ref|ZP_04860952.1| ATP-dependent protease peptidase subunit [Fusobacterium varium ATCC
27725]
gi|251834326|gb|EES62889.1| ATP-dependent protease peptidase subunit [Fusobacterium varium ATCC
27725]
Length = 177
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 95/176 (53%), Positives = 139/176 (78%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ ATTI+ V+KDG V +AGDGQV+ G+ V K+NA+K+R++G ++AGFAG++ADAF L+
Sbjct: 2 IRATTIIAVKKDGKVAVAGDGQVTFGEVVFKSNAKKIRKIGNYEVLAGFAGAAADAFALM 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
++ E KL+++ L ++SVELAKDWR DK LR L+AM+++ADK + L+++G GDV+EP+
Sbjct: 62 DKFENKLDEFGGNLKKASVELAKDWRTDKALRVLDAMLIVADKNMILILSGNGDVIEPDG 121
Query: 133 GVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
V AIGSGG+YA +AARAL+ + + SAEEIA +AM+IA ++C+YTN NIV + L
Sbjct: 122 DVAAIGSGGNYAYAAARALVRNNKEMSAEEIAVEAMNIAGEMCIYTNLNIVYDVLS 177
>gi|166710519|ref|ZP_02241726.1| ATP-dependent protease peptidase subunit [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 183
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 100/184 (54%), Positives = 136/184 (73%), Gaps = 3/184 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
M +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1 MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
G++ADAFTL E E KL+++ QL R++VELAKDWR ++ L LEA++ +ADK +L+I
Sbjct: 61 GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIG 119
Query: 123 GMGDVLEPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
G GDV+EPE+G++AIGSGG +A L T+ A+ IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGAYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVV 179
Query: 182 LETL 185
+E L
Sbjct: 180 VEEL 183
>gi|257469327|ref|ZP_05633421.1| ATP-dependent protease peptidase subunit [Fusobacterium ulcerans
ATCC 49185]
gi|317063574|ref|ZP_07928059.1| ATP-dependent protease peptidase subunit [Fusobacterium ulcerans
ATCC 49185]
gi|313689250|gb|EFS26085.1| ATP-dependent protease peptidase subunit [Fusobacterium ulcerans
ATCC 49185]
Length = 177
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 95/176 (53%), Positives = 136/176 (77%), Gaps = 2/176 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ ATTI+ V+KDG V +AGDGQV+ G+ V K NA+K+R++G ++AGFAG++ADAF L+
Sbjct: 2 IRATTIIAVKKDGKVAVAGDGQVTFGEVVFKGNAKKIRKIGDYEVLAGFAGAAADAFALM 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
++ E KL+++ L ++SVELAKDWR DK LR L+AM+++ADK + L+++G GDV+EP+
Sbjct: 62 DKFENKLDEFGGNLKKASVELAKDWRTDKALRVLDAMLIVADKNMILILSGNGDVIEPDG 121
Query: 133 GVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
V AIGSGG+YA +AARAL+ + SAEEIA +AM IA ++C+YTN NIV + L
Sbjct: 122 DVAAIGSGGNYAYAAARALIRNNKDMSAEEIAVEAMEIAGEMCIYTNLNIVYDVLS 177
>gi|68070411|ref|XP_677117.1| heat shock protein hslv [Plasmodium berghei strain ANKA]
gi|70936596|ref|XP_739221.1| heat shock protein hslv [Plasmodium chabaudi chabaudi]
gi|56497106|emb|CAH97956.1| heat shock protein hslv, putative [Plasmodium berghei]
gi|56516054|emb|CAH79397.1| heat shock protein hslv, putative [Plasmodium chabaudi chabaudi]
Length = 158
Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats.
Identities = 93/159 (58%), Positives = 123/159 (77%), Gaps = 2/159 (1%)
Query: 28 VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
+ GDG VS G ++K NA+K+RRL K NI+ GFAG++AD FTLL++ E K+++YPNQLL
Sbjct: 1 CLIGDGMVSQGTMIVKGNAKKIRRL-KDNILMGFAGATADCFTLLDKFETKIDEYPNQLL 59
Query: 88 RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
RS VELAK WR D+YLR+LEA++++ADK L +TG GDVLEP V+ GSGG YA++A
Sbjct: 60 RSCVELAKLWRTDRYLRHLEAVLIVADKDTLLEVTGNGDVLEPSGNVLGTGSGGPYAIAA 119
Query: 148 ARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETL 185
ARAL + SA++IA KAM+IAAD+C +TNHN + ETL
Sbjct: 120 ARALYDIENLSAKDIAYKAMNIAADMCCHTNHNFICETL 158
>gi|320155144|ref|YP_004187523.1| ATP-dependent protease HslV [Vibrio vulnificus MO6-24/O]
gi|319930456|gb|ADV85320.1| ATP-dependent protease HslV [Vibrio vulnificus MO6-24/O]
Length = 157
Score = 236 bits (604), Expect = 8e-61, Method: Composition-based stats.
Identities = 86/150 (57%), Positives = 116/150 (77%), Gaps = 1/150 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK NARKVRRL ++AGFAG +ADAFTL ER E KL+ + L +++VELAKDWR D+
Sbjct: 1 MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG+YA +AA AL+ +T+ A E
Sbjct: 61 ALRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGAYAQAAATALLENTELDARE 120
Query: 161 IARKAMSIAADICVYTNHNIVLETLKVGDE 190
IA KA++IA DICV+TNHN +E L++ E
Sbjct: 121 IAEKALNIAGDICVFTNHNHTIEELEIPAE 150
>gi|332187360|ref|ZP_08389098.1| proteasome A-type and B-type family protein [Sphingomonas sp. S17]
gi|332012521|gb|EGI54588.1| proteasome A-type and B-type family protein [Sphingomonas sp. S17]
Length = 153
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 104/150 (69%), Positives = 128/150 (85%)
Query: 37 LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD 96
+GQTVMK NARKVRRLG G++I GFAG++ADAFTL ERLE KLE++ QLLR++VELAKD
Sbjct: 1 MGQTVMKPNARKVRRLGDGSVIGGFAGATADAFTLFERLEAKLERHNGQLLRAAVELAKD 60
Query: 97 WRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
WR DK+LRNLEAM+++ADK +TL++TG GDVLEPENG+ AIGSGG+YAL+AARAL +
Sbjct: 61 WRTDKFLRNLEAMMIVADKDVTLILTGNGDVLEPENGICAIGSGGNYALAAARALDDYEQ 120
Query: 157 SAEEIARKAMSIAADICVYTNHNIVLETLK 186
AE IARKAM+IAAD+CVYTN + LE +
Sbjct: 121 DAETIARKAMAIAADVCVYTNDRVTLEAID 150
>gi|295111499|emb|CBL28249.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Synergistetes bacterium SGP1]
Length = 180
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 92/174 (52%), Positives = 125/174 (71%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI+ VR V +AGDGQV+LG ++K+ ARKVR L G I+ GFAGS+ADA TLL
Sbjct: 5 FTGTTIVCVRDGARVAMAGDGQVTLGSQIIKSGARKVRPLLGGKILTGFAGSTADAMTLL 64
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ER E LEQ L++ +V+L ++WRMDK LR LEAM+L AD+++TL+++G GD+LEPE
Sbjct: 65 ERFENCLEQEKGDLMKGAVKLVREWRMDKALRRLEAMMLAADRSMTLLLSGAGDILEPEG 124
Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V +IGSG YAL+A RAL T S + IAR+A+ +A++IC+YT+ + LE L
Sbjct: 125 DVASIGSGSGYALAAGRALREATDWSPDRIARRAIELASEICIYTDSVVTLEVL 178
>gi|207092708|ref|ZP_03240495.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
HPKX_438_AG0C1]
Length = 169
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 76/159 (47%), Positives = 108/159 (67%), Gaps = 2/159 (1%)
Query: 29 IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
I GDGQV+LG V+KANA K+R L +++GFAGS+ADAF+L + E+ LE L +
Sbjct: 11 IGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADAFSLFDMFERILESKKGDLFK 70
Query: 89 SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-VMAIGSGGSYALSA 147
S V+ +K+WR DKYLR LEAM+++ + +++G GDVLE E+ + AIGSGG+YALSA
Sbjct: 71 SVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVLEAEDNKIAAIGSGGNYALSA 130
Query: 148 ARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
ARAL ++ +++ IA D+C+YTN NI + L
Sbjct: 131 ARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 169
>gi|218296679|ref|ZP_03497397.1| 20S proteasome A and B subunits [Thermus aquaticus Y51MC23]
gi|218242992|gb|EED09525.1| 20S proteasome A and B subunits [Thermus aquaticus Y51MC23]
Length = 194
Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats.
Identities = 92/177 (51%), Positives = 129/177 (72%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAF 69
V++H TTIL VRK GV +AGDGQV+LGQTV+K A KVRRL G ++ GFAG ADA
Sbjct: 15 VEIHGTTILAVRKGGVTALAGDGQVTLGQTVLKRAAVKVRRLEVGEGVLVGFAGGVADAL 74
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
LLER E+KL++ LL+ +VE AK WR D+ LR+LEAMI+ AD+ ++++G G+V+
Sbjct: 75 ALLERFEEKLKEAKGNLLKGAVETAKLWRTDRVLRHLEAMIVAADRENMVLLSGSGEVIA 134
Query: 130 PENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
PE ++A+GSGG YAL+AA+AL + SA+EIA +A+ IAA++ +YT+ + + TL
Sbjct: 135 PEEPLLAVGSGGPYALAAAKALFRHSALSAKEIAEEALKIAAEVDLYTSGQVTVLTL 191
>gi|302824784|ref|XP_002994032.1| hypothetical protein SELMODRAFT_431977 [Selaginella moellendorffii]
gi|300138135|gb|EFJ04914.1| hypothetical protein SELMODRAFT_431977 [Selaginella moellendorffii]
Length = 619
Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 96/186 (51%), Positives = 123/186 (66%), Gaps = 23/186 (12%)
Query: 2 VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
V +H M TT+L +RK+ VVI GDGQV++G ++K N RKVRR+G+ N+I GF
Sbjct: 24 VARRMQHSDKGMIGTTVLCIRKNDSVVIIGDGQVTMGAEILKPNVRKVRRIGE-NVIGGF 82
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
A QL R++VELAK WR DK+LR L+A++++AD I+L I
Sbjct: 83 A---------------------GQLTRAAVELAKAWRTDKFLRRLDALMVVADAEISLTI 121
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNI 180
TG GDVLEP +G++ IGSGGSYA +AARALM AE+IARKAM IAAD C+YTNHN
Sbjct: 122 TGTGDVLEPYDGIVGIGSGGSYASAAARALMDLPDMDAEKIARKAMKIAADCCIYTNHNF 181
Query: 181 VLETLK 186
LET+K
Sbjct: 182 TLETIK 187
>gi|262392522|ref|YP_003284376.1| ATP-dependent protease HslV [Vibrio sp. Ex25]
gi|262336116|gb|ACY49911.1| ATP-dependent protease HslV [Vibrio sp. Ex25]
Length = 156
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 83/146 (56%), Positives = 112/146 (76%), Gaps = 1/146 (0%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
MK NARKVRRL ++AGFAG +ADAFTL ER E KL+ + L +++VELAKDWR D+
Sbjct: 1 MKGNARKVRRLYNNQVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60
Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
LR LEA++ +AD+T +L+ITG GDV++PE+ ++AIGSGG+YA +AA AL+ +T A E
Sbjct: 61 ALRKLEALLAVADETASLIITGNGDVVQPEHDLIAIGSGGAYAQAAATALLENTDLDARE 120
Query: 161 IARKAMSIAADICVYTNHNIVLETLK 186
IA KA++IA DICV+TNH+ +E L
Sbjct: 121 IAEKALNIAGDICVFTNHHHTVEELD 146
>gi|258590895|emb|CBE67190.1| ATP-dependent protease hslV (protease subunit of a proteasome-like
degradation complex) [NC10 bacterium 'Dutch sediment']
Length = 159
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 92/158 (58%), Positives = 118/158 (74%), Gaps = 1/158 (0%)
Query: 29 IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
+AGDGQVS G+TVMK ARKVRRL +IAGFAG++ADAF L R E KLE + L R
Sbjct: 2 VAGDGQVSFGETVMKQTARKVRRLWNDRVIAGFAGAAADAFALQSRFEAKLEAFSGNLPR 61
Query: 89 SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA 148
++VELAKDWR D+ LR LEA+++ D+ +LVI+G GDV+EP++GV+ IGSGG YA++AA
Sbjct: 62 AAVELAKDWRTDRALRRLEALLVAVDREHSLVISGTGDVIEPDDGVVGIGSGGQYAVAAA 121
Query: 149 RALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
RAL+ ++ A IA +AM IAA ICVYTN I +E L
Sbjct: 122 RALIGFSELDARRIAEEAMKIAASICVYTNDTITIEEL 159
>gi|255080038|ref|XP_002503599.1| predicted protein [Micromonas sp. RCC299]
gi|226518866|gb|ACO64857.1| predicted protein [Micromonas sp. RCC299]
Length = 180
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 97/162 (59%), Positives = 123/162 (75%), Gaps = 2/162 (1%)
Query: 30 AGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRS 89
DGQV+LG V+K N +KVRRL +G ++ GFAG++ADAFTL ERLE KLE++P QL R+
Sbjct: 1 MADGQVTLGSQVIKPNVKKVRRL-QGGVVGGFAGATADAFTLFERLEMKLEEHPGQLTRA 59
Query: 90 SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAAR 149
+VELAK WR DKYLR LEA +++ADK T ITG GDV+EP +GV+ IGSGG YA +AAR
Sbjct: 60 AVELAKAWRNDKYLRRLEATMVVADKHHTFQITGGGDVIEPHDGVIGIGSGGPYATAAAR 119
Query: 150 ALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
AL+ A IA+KAM+IAAD CVYTNHN ++E++ DE
Sbjct: 120 ALVDIDGMDAMAIAKKAMNIAADTCVYTNHNFIIESIGPNDE 161
>gi|300812250|ref|ZP_07092688.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
gi|300496764|gb|EFK31848.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
delbrueckii subsp. bulgaricus PB2003/044-T3-4]
gi|325686013|gb|EGD28072.1| heat shock protein HslV [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 177
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 81/174 (46%), Positives = 121/174 (69%), Gaps = 3/174 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +V+ +G IAGDGQV+LG++++ K A+K+RR+ ++ GFAG ADA +L E
Sbjct: 2 TTICSVKYNGQTAIAGDGQVTLGKSIIAKTTAKKIRRIYHDQVVIGFAGGVADAVSLQEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ LEAM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQSWRKDPTLQKLEAMVIAFNDQDLLLISGNGEVLEPDESV 121
Query: 135 MAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+AIGSGG YA +AA ++ +A EIA++A++IAADI V+T+H IV + ++
Sbjct: 122 VAIGSGGYYAQAAAVGMLRHASGMTASEIAKEAVNIAADIDVFTDHEIVTDEIE 175
>gi|104774157|ref|YP_619137.1| ATP-dependent protease peptidase subunit [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116514250|ref|YP_813156.1| ATP-dependent protease peptidase subunit [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|103423238|emb|CAI98071.1| ATP-dependent protease HslVU (ClpYQ), peptidasesubunit
[Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
gi|116093565|gb|ABJ58718.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|325125939|gb|ADY85269.1| ATP-dependent protease hslV [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 177
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 81/174 (46%), Positives = 121/174 (69%), Gaps = 3/174 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +V+ +G IAGDGQV+LG++++ K A+K+RR+ ++ GFAG ADA +L E
Sbjct: 2 TTICSVKYNGQTAIAGDGQVTLGKSIIAKTTAKKIRRIYHDQVVIGFAGGVADAVSLQEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ LEAM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQSWRKDPALQKLEAMVIAFNDQDLLLISGNGEVLEPDESV 121
Query: 135 MAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+AIGSGG YA +AA ++ +A EIA++A++IAADI V+T+H IV + ++
Sbjct: 122 VAIGSGGYYAQAAAVGMLRHASGMTASEIAKEAVNIAADIDVFTDHEIVTDEIE 175
>gi|313123910|ref|YP_004034169.1| ATP-dependent protease hslv [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|11133031|sp|Q48734|HSLV_LACLE RecName: Full=ATP-dependent protease subunit HslV
gi|1359911|emb|CAA59019.1| heat shock induced protein HtpI [Lactobacillus leichmannii]
gi|312280473|gb|ADQ61192.1| ATP-dependent protease hslV [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 177
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 81/174 (46%), Positives = 122/174 (70%), Gaps = 3/174 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +V+ +G IAGDGQV+LG++++ K A+K+RR+ ++ GFAG ADA +L E
Sbjct: 2 TTICSVKYNGQTAIAGDGQVTLGKSIIAKTTAKKIRRIYHDQVVIGFAGGVADAVSLQEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D+ L+ LEAM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQSWRKDQTLQKLEAMVIAFNDQDLLLISGNGEVLEPDESV 121
Query: 135 MAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+AIGSGG YA +AA ++ +A EIA++A++IAADI V+T+H IV + ++
Sbjct: 122 VAIGSGGYYAQAAAVGMLRHASGMTASEIAKEAVNIAADIDVFTDHEIVTDEIE 175
>gi|322829064|gb|EFZ32621.1| hslvu complex proteolytic subunit-like, putative [Trypanosoma
cruzi]
Length = 265
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 88/179 (49%), Positives = 130/179 (72%), Gaps = 4/179 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
A + TTIL+VRK VV+ GD QV+LG+ ++ K++A K+R++ +I+ GFAGS+ADA
Sbjct: 70 ACQSRQTTILSVRKGDTVVLIGDRQVTLGERIVAKSSACKLRKI-NDDIVIGFAGSTADA 128
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
L+E+LE K+ ++P QL R++VELAKDWR D+ LR LEA +++ + TL I G G+V+
Sbjct: 129 IALMEKLENKVGEFPQQLTRAAVELAKDWRTDRALRRLEASLIVCGREETLEIDGQGNVI 188
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
PE +G++AIGSGG++A +AARAL+ AE+IARKAM IA +I V++N + +E L
Sbjct: 189 TPESDGIVAIGSGGTFAKAAARALIDVDGYDAEKIARKAMRIATEIDVFSNEHWDVEIL 247
>gi|218680180|ref|ZP_03528077.1| ATP-dependent protease peptidase subunit [Rhizobium etli CIAT 894]
Length = 138
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 110/137 (80%), Positives = 126/137 (91%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121
Query: 136 AIGSGGSYALSAARALM 152
AIGSGG++A +AARALM
Sbjct: 122 AIGSGGNFAFAAARALM 138
>gi|313680129|ref|YP_004057868.1| ATP dependent peptidase codwx, codw component [Oceanithermus
profundus DSM 14977]
gi|313152844|gb|ADR36695.1| ATP dependent peptidase CodWX, CodW component [Oceanithermus
profundus DSM 14977]
Length = 177
Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats.
Identities = 89/171 (52%), Positives = 120/171 (70%), Gaps = 2/171 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MH TTIL V KDG IAGDGQV+ G TVMK A KVR+L + +++ GFAG+ ADA TLL
Sbjct: 1 MHGTTILAVHKDGETAIAGDGQVTFGDTVMKQGAVKVRKL-EDDVLVGFAGAVADALTLL 59
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E++LE L R++VE K WR D+ LR LEAM+++AD L+++G G+V+ P+
Sbjct: 60 EKFEEQLEIAKGSLKRAAVETVKLWRTDRILRQLEAMLIVADAREILLLSGTGEVIAPDE 119
Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVL 182
++A+GSG YALSAA+AL T+ A EIA KA+ IAA+I +YTN N +
Sbjct: 120 PLVAVGSGAPYALSAAKALYRETRLGAAEIAEKALGIAAEIDLYTNGNATV 170
>gi|256851128|ref|ZP_05556517.1| heat shock induced protein HtpI [Lactobacillus jensenii 27-2-CHN]
gi|260660552|ref|ZP_05861467.1| heat shock induced protein HtpI [Lactobacillus jensenii 115-3-CHN]
gi|282932233|ref|ZP_06337677.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
jensenii 208-1]
gi|297205993|ref|ZP_06923388.1| ATP-dependent protease peptidase subunit [Lactobacillus jensenii
JV-V16]
gi|256616190|gb|EEU21378.1| heat shock induced protein HtpI [Lactobacillus jensenii 27-2-CHN]
gi|260548274|gb|EEX24249.1| heat shock induced protein HtpI [Lactobacillus jensenii 115-3-CHN]
gi|281303628|gb|EFA95786.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
jensenii 208-1]
gi|297149119|gb|EFH29417.1| ATP-dependent protease peptidase subunit [Lactobacillus jensenii
JV-V16]
Length = 176
Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats.
Identities = 79/173 (45%), Positives = 118/173 (68%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI++V+ +G IAGDGQV+LG+ + K +A+K+RR+ ++ GFAG ADA +L E
Sbjct: 2 TTIVSVKHNGKTAIAGDGQVTLGEKYISKKSAKKIRRIYNNQVVIGFAGGVADAVSLEEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L+AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQSWRKDPTLQKLQAMLIAFNDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG +A +AA A+ A EIA++A+ IAADI V+T+H I+ + +
Sbjct: 122 VAIGSGGYFAQAAAVAMTRHAKDMDASEIAKEAVGIAADIDVFTDHEIITDEI 174
>gi|238855699|ref|ZP_04645996.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
jensenii 269-3]
gi|260664454|ref|ZP_05865306.1| heat shock induced protein HtpI [Lactobacillus jensenii SJ-7A-US]
gi|282932213|ref|ZP_06337660.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
jensenii 208-1]
gi|313472146|ref|ZP_07812638.1| heat shock protein HslV [Lactobacillus jensenii 1153]
gi|238831684|gb|EEQ24024.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
jensenii 269-3]
gi|239529517|gb|EEQ68518.1| heat shock protein HslV [Lactobacillus jensenii 1153]
gi|260561519|gb|EEX27491.1| heat shock induced protein HtpI [Lactobacillus jensenii SJ-7A-US]
gi|281303663|gb|EFA95818.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
jensenii 208-1]
Length = 176
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 79/173 (45%), Positives = 120/173 (69%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI++V+ +G IAGDGQV+LG+ + K +A+K+RR+ ++ GFAG ADA +L E
Sbjct: 2 TTIVSVKHNGKTAIAGDGQVTLGEKYISKKSAKKIRRIYNNQVVIGFAGGVADAVSLEEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L+AM++ ++ L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQSWRKDPTLQKLQAMLIAFNEKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG +A +AA A+ + A EIA++A+ IAADI V+T+H I+ + +
Sbjct: 122 VAIGSGGYFAQAAAVAMTRHAKEMDASEIAKEAVGIAADIDVFTDHEIITDEI 174
>gi|161507475|ref|YP_001577429.1| ATP-dependent protease peptidase subunit [Lactobacillus helveticus
DPC 4571]
gi|160348464|gb|ABX27138.1| ATP-dependent heat shock protein [Lactobacillus helveticus DPC
4571]
gi|323466639|gb|ADX70326.1| ATP-dependent protease HslVU [Lactobacillus helveticus H10]
Length = 178
Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 82/178 (46%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAF 69
++ + TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ +I GFAG ADA
Sbjct: 1 MRFNMTTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVIIGFAGGVADAV 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+L + LE KLE Y L R++VE+A+ WR D L+ L AM++ + L+I+G G+VLE
Sbjct: 61 SLQDMLEGKLEAYNGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFNDKDLLLISGNGEVLE 120
Query: 130 PENGVMAIGSGGSYALSAARALMSTQNS--AEEIARKAMSIAADICVYTNHNIVLETL 185
P+ V+AIGSGG++A +AA A+ N A+EIA +A+ IA+ I V+T+ +IV + +
Sbjct: 121 PDENVVAIGSGGNFAQAAAIAMTRHANDMQADEIAHEAVKIASGIDVFTDDHIVTDEI 178
>gi|261884678|ref|ZP_06008717.1| ATP-dependent protease peptidase subunit [Campylobacter fetus
subsp. venerealis str. Azul-94]
Length = 180
Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats.
Identities = 86/180 (47%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
HA TIL + +I GDGQVS TV+K NA K+R+L G I+AGFAGS+ADAF L
Sbjct: 2 FHARTILAYKGTKGSIIGGDGQVSFVHTVLKGNAVKIRKLLGGRILAGFAGSTADAFNLF 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
+ E+ L LL + + +K+WR DK LR LEAM+L+ D+ +++G GDV+EPE+
Sbjct: 62 DMSERILVSTKGDLLPAVMAFSKEWRKDKVLRKLEAMMLVLDRVHIFLLSGTGDVVEPED 121
Query: 133 G-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
G + AIGSGG+YAL+AARAL + EE+ ++++ IA +IC+YTN NI +T + DE
Sbjct: 122 GTIAAIGSGGNYALAAARALDKFADINEEELVKESLKIAGEICIYTNTNI--KTYALWDE 179
>gi|81428596|ref|YP_395596.1| ATP-dependent protease peptidase subunit [Lactobacillus sakei
subsp. sakei 23K]
gi|78610238|emb|CAI55287.1| ATP-dependent Hsl protease, proteolytic subunit HslV [Lactobacillus
sakei subsp. sakei 23K]
Length = 181
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 79/179 (44%), Positives = 120/179 (67%), Gaps = 10/179 (5%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V+ +G IAGDGQV++G+ V K +A+K+RR+ + GFAG ADAFTL E
Sbjct: 2 TTICAVKHNGRTAIAGDGQVTMGEKFVTKDSAKKIRRIYDNKVAIGFAGGVADAFTLQEW 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE--- 131
E+KLE+Y L ++V LA+DWR D L+ LEAM++ ++T L+I+G G+V+ P+
Sbjct: 62 FEQKLEKYSGDLQHAAVALAQDWRKDPTLQKLEAMLIAINETDILLISGNGEVITPDTLA 121
Query: 132 ---NGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
+ V+A+GSGG++A +AA AL+ + +AE+I ++IA I VYTNHN+++E+
Sbjct: 122 ESGDQVIAVGSGGNFAQAAATALILEGKPELTAEKIVETGVNIAGGIDVYTNHNVIVES 180
>gi|118382535|ref|XP_001024425.1| peptidase, T1 family protein [Tetrahymena thermophila]
gi|89306192|gb|EAS04180.1| peptidase, T1 family protein [Tetrahymena thermophila SB210]
Length = 229
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 95/177 (53%), Positives = 124/177 (70%), Gaps = 7/177 (3%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K TTIL V+K+ + I GDGQVSLG TV+K + RKVR+L G+I GFAGS ADAFTL
Sbjct: 28 KWRQTTILAVKKNNEICIVGDGQVSLGSTVVKTDGRKVRKLANGSI-CGFAGSLADAFTL 86
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE-P 130
+E LE + + P L++ + AK WR K LR+LEA +L+ DK + + + G G+VLE P
Sbjct: 87 MEGLENIMTKQPT--LKACITYAKQWRTGKALRHLEATLLVVDKDLIVELDGTGNVLEIP 144
Query: 131 ENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
E V+ IGSGG++A AARAL+ SA++IA K+M IAAD C+YTNHN V+ETLK
Sbjct: 145 E--VIGIGSGGAFAECAARALIDIDGMSAKDIALKSMKIAADKCIYTNHNWVVETLK 199
>gi|293380241|ref|ZP_06626322.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
crispatus 214-1]
gi|312977300|ref|ZP_07789048.1| heat shock protein HslV [Lactobacillus crispatus CTV-05]
gi|290923208|gb|EFE00130.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
crispatus 214-1]
gi|310895731|gb|EFQ44797.1| heat shock protein HslV [Lactobacillus crispatus CTV-05]
Length = 178
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 81/178 (45%), Positives = 119/178 (66%), Gaps = 3/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAF 69
++ + TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ ++ GFAG ADA
Sbjct: 1 MRFNMTTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAGGVADAV 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+L + LE KLE Y L R++VE+A+ WR D L+ L AM++ D L+I+G G+VLE
Sbjct: 61 SLQDMLEGKLESYSGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFDDKDLLLISGNGEVLE 120
Query: 130 PENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
P+ V+AIGSGG++A +AA A+ A+EIA +A+ IA+ I V+T+ IV + +
Sbjct: 121 PDENVVAIGSGGNFAQAAAIAMTRHAKDMKADEIAHEAVKIASGIDVFTDDKIVTDEI 178
>gi|116629574|ref|YP_814746.1| ATP-dependent protease peptidase subunit [Lactobacillus gasseri
ATCC 33323]
gi|238853067|ref|ZP_04643459.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
gasseri 202-4]
gi|282852047|ref|ZP_06261405.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
gasseri 224-1]
gi|300361601|ref|ZP_07057778.1| ATP-dependent protease HslVU [Lactobacillus gasseri JV-V03]
gi|311110783|ref|ZP_07712180.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
gasseri MV-22]
gi|116095156|gb|ABJ60308.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
[Lactobacillus gasseri ATCC 33323]
gi|238834315|gb|EEQ26560.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
gasseri 202-4]
gi|282556807|gb|EFB62411.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
gasseri 224-1]
gi|300354220|gb|EFJ70091.1| ATP-dependent protease HslVU [Lactobacillus gasseri JV-V03]
gi|311065937|gb|EFQ46277.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
gasseri MV-22]
Length = 174
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 78/173 (45%), Positives = 116/173 (67%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR + IAGDGQV+LG+ V+ KA A+K+RR+ ++ GFAG ADA +L +
Sbjct: 2 TTICSVRYNNQTAIAGDGQVTLGEKVIAKATAKKIRRIYHDQVVIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L L+AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLETYSGDLRRAAVEMAQSWRKDPTLAKLQAMVIAFNDKDLLLISGNGEVLEPDEDV 121
Query: 135 MAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ SA EIA++A+ IA+ I V+T+ +I + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHSSGMSASEIAKEAVKIASGIDVFTDDHITTDEI 174
>gi|42519037|ref|NP_964967.1| ATP-dependent protease peptidase subunit [Lactobacillus johnsonii
NCC 533]
gi|227889899|ref|ZP_04007704.1| T01 family HslV component of HslUV peptidase [Lactobacillus
johnsonii ATCC 33200]
gi|268319570|ref|YP_003293226.1| ATP-dependent protease peptidase subunit HslV [Lactobacillus
johnsonii FI9785]
gi|41583324|gb|AAS08933.1| ATP-dependent protease HslV [Lactobacillus johnsonii NCC 533]
gi|227849343|gb|EEJ59429.1| T01 family HslV component of HslUV peptidase [Lactobacillus
johnsonii ATCC 33200]
gi|262397945|emb|CAX66959.1| ATP-dependent protease peptidase subunit HslV [Lactobacillus
johnsonii FI9785]
gi|329667429|gb|AEB93377.1| ATP-dependent protease [Lactobacillus johnsonii DPC 6026]
Length = 174
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 78/173 (45%), Positives = 116/173 (67%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR + IAGDGQV+LG+ V+ KA A+K+RR+ ++ GFAG ADA +L +
Sbjct: 2 TTICSVRYNNKTAIAGDGQVTLGEKVIAKATAKKIRRIYHDQVVIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L L+AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLETYSGDLRRAAVEMAQSWRKDPTLAKLQAMVIAFNDKDLLLISGNGEVLEPDEDV 121
Query: 135 MAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ SA EIA++A+ IA+ I V+T+ +I + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHSNGMSASEIAKEAVKIASGIDVFTDDHITTDEI 174
>gi|315038213|ref|YP_004031781.1| ATP-dependent protease peptidase subunit [Lactobacillus amylovorus
GRL 1112]
gi|325956668|ref|YP_004292080.1| ATP-dependent protease subunit HslV [Lactobacillus acidophilus
30SC]
gi|312276346|gb|ADQ58986.1| ATP-dependent protease peptidase subunit [Lactobacillus amylovorus
GRL 1112]
gi|325333233|gb|ADZ07141.1| ATP-dependent protease subunit HslV [Lactobacillus acidophilus
30SC]
gi|327183491|gb|AEA31938.1| ATP-dependent protease subunit HslV [Lactobacillus amylovorus GRL
1118]
Length = 174
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 81/173 (46%), Positives = 117/173 (67%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ ++ GFAG ADA +L E
Sbjct: 2 TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAGGVADAVSLQEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+DWR D L+ L AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQDWRKDPALQKLNAMLIAFNDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ A+EIA +A+ IA+ I V+T+ I+ + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHAKDMKADEIAHEAVKIASGIDVFTDDQIITDEI 174
>gi|146103656|ref|XP_001469616.1| hs1vu complex proteolytic subunit-like; hs1vu complex proteolytic
subunit-like,threonine peptidase, Clan T(1), family T1B
[Leishmania infantum]
gi|25956176|emb|CAC82584.1| HslVU complex proteolytic subunit [Leishmania infantum]
gi|134073986|emb|CAM72726.1| hs1vu complex proteolytic subunit-like [Leishmania infantum JPCM5]
gi|322503769|emb|CBZ38855.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 220
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 95/179 (53%), Positives = 130/179 (72%), Gaps = 4/179 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
AV+ TTIL+VRK V++ GD QV+LG+ ++ K++A K+R+L N++ GFAGS+ADA
Sbjct: 17 AVQARHTTILSVRKGNKVILIGDRQVTLGERIVAKSSACKLRKL-NDNVVIGFAGSTADA 75
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F L+E+LE KL +P QL R++VELAKDWR D+ LR LEA +++ K TL I G G+V+
Sbjct: 76 FALMEKLENKLNDFPEQLSRAAVELAKDWRTDRALRRLEASLIVCSKEETLEIDGQGNVI 135
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
PE +G++AIGSGG+YA +AARAL+ AE IARKAM IA DI V++N N +E L
Sbjct: 136 TPEADGIIAIGSGGTYAKAAARALIDVDGYDAERIARKAMRIATDIDVFSNSNWDVEIL 194
>gi|297624296|ref|YP_003705730.1| 20S proteasome A and subunit Bs [Truepera radiovictrix DSM 17093]
gi|297165476|gb|ADI15187.1| 20S proteasome A and B subunits [Truepera radiovictrix DSM 17093]
Length = 202
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 89/178 (50%), Positives = 117/178 (65%), Gaps = 3/178 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
MH TTI+ V KDGV IAGDGQV+LG T++K A KVR L G +I GFAG+ +DAFTLL
Sbjct: 1 MHGTTIVAVHKDGVTAIAGDGQVTLGDTIVKKGATKVRSLMDGRVITGFAGAVSDAFTLL 60
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
E+ E L Y L+R++VE K+WR D+ LRNLEAM+++AD L ++G GDV+ P+
Sbjct: 61 EKFEGYLSTYRGNLMRAAVETVKEWRTDRMLRNLEAMLIVADAEQILTLSGAGDVIAPDE 120
Query: 133 GVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
+ A+GSGG +A L + SA EIA A+ IAADI +YT+ + LKV D
Sbjct: 121 PIAAVGSGGAYAQAAATALLRHSDMSAAEIAETALLIAADIDIYTSGTATV--LKVPD 176
>gi|295426271|ref|ZP_06818931.1| ATP-dependent protease HslVU [Lactobacillus amylolyticus DSM 11664]
gi|295064010|gb|EFG54958.1| ATP-dependent protease HslVU [Lactobacillus amylolyticus DSM 11664]
Length = 174
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 81/173 (46%), Positives = 117/173 (67%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +V+ +G IAGDGQV+LG+ V+ KA+A+K+RR+ ++ GFAG ADA +L E
Sbjct: 2 TTICSVKFNGKTAIAGDGQVTLGEKVIAKASAKKIRRIFHDRVVIGFAGGVADAVSLQEM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L AM++ D L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMARSWRKDPTLQKLNAMLIAFDDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YA +AA A+ + SA +IA +A+ IA+ I V+T+ I + L
Sbjct: 122 VAIGSGGNYAQAAAIAMTRHAKEMSASDIAHEAVKIASGIDVFTDDQITTDEL 174
>gi|322490991|emb|CBZ26255.1| hs1vu complex proteolytic subunit-like,hs1vu complex proteolytic
subunit-like, threonine peptidase, Clan T(1), family T1B
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 226
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 95/183 (51%), Positives = 131/183 (71%), Gaps = 4/183 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
AV+ TTIL+VRK V++ GD QV+LG+ ++ K++A K+R+L N++ GFAGS+ADA
Sbjct: 17 AVQARHTTILSVRKGNKVILIGDRQVTLGERIVAKSSACKLRKL-NDNVVIGFAGSTADA 75
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F L+E+LE KL +P QL R++VELAKDWR D+ LR LEA +++ K TL I G G+V+
Sbjct: 76 FALMEKLENKLNDFPEQLSRAAVELAKDWRTDRALRRLEASLIVCSKEETLEIDGQGNVI 135
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
PE +G++AIGSGG+YA +AARAL+ AE IARKAM IA DI V++N N +E L
Sbjct: 136 TPEADGIIAIGSGGTYAKAAARALIDVDGYDAERIARKAMRIATDIDVFSNSNWDVEILT 195
Query: 187 VGD 189
+
Sbjct: 196 REE 198
>gi|154346210|ref|XP_001569042.1| hs1vu complex proteolytic subunit-like [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066384|emb|CAM44175.1| hs1vu complex proteolytic subunit-like,threonine peptidase, Clan
T(1), family T1B [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 217
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 94/179 (52%), Positives = 130/179 (72%), Gaps = 4/179 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
AV+ +TTIL+VRK V++ GD QV+LG+ ++ K++A K+R+L N+ GFAGS+ADA
Sbjct: 17 AVQRRSTTILSVRKGNKVILIGDRQVTLGERIVAKSSACKLRKL-NDNVAIGFAGSTADA 75
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F L+E+LE KL +P+QL R++VELAKDWR D+ LR LEA +++ K TL I G G+V+
Sbjct: 76 FALMEKLENKLNDFPDQLSRAAVELAKDWRTDRALRRLEASLIVCSKEETLEIDGQGNVI 135
Query: 129 EP-ENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
P E+G++AIGSGG+YA +AARAL+ AE IA KAM IA DI V++N N +E L
Sbjct: 136 TPEEDGIIAIGSGGTYAKAAARALIDVDGYDAERIALKAMKIATDIDVFSNSNWDVEML 194
>gi|157877319|ref|XP_001686982.1| hs1vu complex proteolytic subunit-like; hs1vu complex proteolytic
subunit-like, threonine peptidase, Clan T(1), family T1B
[Leishmania major]
gi|68130057|emb|CAJ09365.1| hs1vu complex proteolytic subunit-like [Leishmania major strain
Friedlin]
Length = 214
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 96/184 (52%), Positives = 132/184 (71%), Gaps = 4/184 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
AV+ TTIL+VRK V++ GD QV+LG+ ++ K++A K+R+L N++ GFAGS+ADA
Sbjct: 17 AVQARHTTILSVRKGSKVILIGDRQVTLGERIVAKSSACKLRKL-NDNVVIGFAGSTADA 75
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
F L+E+LE KL +P QL R++VELAKDWR D+ LR LEA +++ K TL I G G+V+
Sbjct: 76 FALMEKLENKLNDFPEQLSRAAVELAKDWRTDRALRRLEASLIVCSKEETLEIDGQGNVI 135
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
PE +G++AIGSGG+YA +AARAL+ AE IARKAM IA DI V++N N +E L
Sbjct: 136 TPEADGIIAIGSGGTYAKAAARALIDVDGYDAERIARKAMRIATDIDVFSNSNWDVEILT 195
Query: 187 VGDE 190
+E
Sbjct: 196 RDEE 199
>gi|58337281|ref|YP_193866.1| ATP-dependent protease peptidase subunit [Lactobacillus acidophilus
NCFM]
gi|58254598|gb|AAV42835.1| ATP-dependent heat shock protease [Lactobacillus acidophilus NCFM]
Length = 174
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 81/173 (46%), Positives = 118/173 (68%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ ++ GFAG ADA +L +
Sbjct: 2 TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L AM++ D L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFDDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ + A+EIA +A+ IA+ I V+T+ +IV + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHAKEMKADEIAHEAVKIASGIDVFTDDHIVTDEI 174
>gi|260101612|ref|ZP_05751849.1| ATP-dependent protease HslVU [Lactobacillus helveticus DSM 20075]
gi|260084575|gb|EEW68695.1| ATP-dependent protease HslVU [Lactobacillus helveticus DSM 20075]
Length = 174
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 82/173 (47%), Positives = 119/173 (68%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ +I GFAG ADA +L +
Sbjct: 2 TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVIIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L AM++ ++ L+I+G G+VLEP+ V
Sbjct: 62 LEGKLEAYNGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFNEKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALMSTQNS--AEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ N A+EIA +A+ IA+ I V+T+ +IV + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHANDMQADEIAHEAVKIASGIDVFTDDHIVTDEI 174
>gi|112148387|gb|ABI13540.1| ATP-dependent protease Hs IVU peptidase subunit-like protein
[Lactobacillus helveticus CNRZ32]
gi|328467377|gb|EGF38455.1| ATP-dependent protease subunit HslV [Lactobacillus helveticus MTCC
5463]
Length = 174
Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats.
Identities = 82/173 (47%), Positives = 118/173 (68%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ +I GFAG ADA +L +
Sbjct: 2 TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVIIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLEAYNGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFNDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALMSTQNS--AEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ N A+EIA +A+ IA+ I V+T+ +IV + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHANDMQADEIAHEAVKIASGIDVFTDDHIVTDEI 174
>gi|74025044|ref|XP_829088.1| HslVU complex proteolytic subunit [Trypanosoma brucei TREU927]
gi|70834474|gb|EAN79976.1| hslVU complex proteolytic subunit, putative [Trypanosoma brucei]
gi|261335037|emb|CBH18031.1| hslVU complex proteolytic subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 209
Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats.
Identities = 91/184 (49%), Positives = 134/184 (72%), Gaps = 4/184 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
A ++ TTIL+VRK VV+ GD QV+LG+ ++ K++A K+RR+ +++ GFAGS+ADA
Sbjct: 14 ACQLRHTTILSVRKGDTVVLLGDRQVTLGERIVAKSSACKLRRI-NDDVVIGFAGSTADA 72
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
+L+E+LE K+ ++PNQL R++VELAK+WR D+ LR LEA +++ TL I G G+V+
Sbjct: 73 ISLMEKLENKIGEFPNQLTRAAVELAKEWRTDRALRRLEASLIVCSAEETLEIDGQGNVI 132
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETLK 186
PE +G++AIGSGG++A +AARAL+ AE+IARKAM IA DI V++N + +E LK
Sbjct: 133 TPEADGIVAIGSGGTFAKAAARALIDVDGYDAEKIARKAMRIATDIDVFSNEHWDVEVLK 192
Query: 187 VGDE 190
E
Sbjct: 193 RKSE 196
>gi|227893508|ref|ZP_04011313.1| ATP-dependent protease peptidase subunit [Lactobacillus ultunensis
DSM 16047]
gi|227864678|gb|EEJ72099.1| ATP-dependent protease peptidase subunit [Lactobacillus ultunensis
DSM 16047]
Length = 174
Score = 226 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 80/173 (46%), Positives = 116/173 (67%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ +I GFAG ADA +L +
Sbjct: 2 TTICSVRYNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVIIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFNDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ A+EIA +A+ IA+ I V+T+ I+ + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHAKDMKADEIAHEAVKIASGIDVFTDDQIITDEI 174
>gi|259500640|ref|ZP_05743542.1| ATP-dependent protease HslVU [Lactobacillus iners DSM 13335]
gi|302191329|ref|ZP_07267583.1| ATP-dependent protease peptidase subunit [Lactobacillus iners AB-1]
gi|309805691|ref|ZP_07699731.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LactinV 09V1-c]
gi|309805937|ref|ZP_07699967.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LactinV 03V1-b]
gi|309809277|ref|ZP_07703146.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners SPIN 2503V10-D]
gi|312871403|ref|ZP_07731498.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 3008A-a]
gi|312872284|ref|ZP_07732354.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 2062A-h1]
gi|312873945|ref|ZP_07733981.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 2052A-d]
gi|312875461|ref|ZP_07735464.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 2053A-b]
gi|315653525|ref|ZP_07906446.1| ATP-dependent protease HslVU [Lactobacillus iners ATCC 55195]
gi|325912008|ref|ZP_08174410.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners UPII 143-D]
gi|325912842|ref|ZP_08175220.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners UPII 60-B]
gi|329921341|ref|ZP_08277779.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners SPIN 1401G]
gi|259168024|gb|EEW52519.1| ATP-dependent protease HslVU [Lactobacillus iners DSM 13335]
gi|308164944|gb|EFO67187.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LactinV 09V1-c]
gi|308167676|gb|EFO69825.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LactinV 03V1-b]
gi|308170390|gb|EFO72414.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners SPIN 2503V10-D]
gi|311088972|gb|EFQ47413.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 2053A-b]
gi|311090494|gb|EFQ48902.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 2052A-d]
gi|311092107|gb|EFQ50481.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 2062A-h1]
gi|311093056|gb|EFQ51405.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LEAF 3008A-a]
gi|315489216|gb|EFU78857.1| ATP-dependent protease HslVU [Lactobacillus iners ATCC 55195]
gi|325476193|gb|EGC79357.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners UPII 143-D]
gi|325477835|gb|EGC80969.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners UPII 60-B]
gi|328934633|gb|EGG31137.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners SPIN 1401G]
Length = 174
Score = 226 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 80/173 (46%), Positives = 115/173 (66%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI VR G + IAGDGQV+LG+ V+ K+ A+KVRR+ ++ GFAG ADA +L +
Sbjct: 2 TTICAVRHKGKIAIAGDGQVTLGEKVIAKSTAKKVRRIYHNQVVVGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L RS+VE+A+ WR D L L+AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLETYSGDLRRSTVEMAQGWRKDPTLAKLQAMMIAFNDKDLLLISGNGEVLEPDEDV 121
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YA +AA A++ A +IA++A+ IAA I V+T+ I + +
Sbjct: 122 VAIGSGGNYAQAAALAMIRHSSDMDACDIAKEAVLIAAGIDVFTDDKITSDEI 174
>gi|291296103|ref|YP_003507501.1| 20S proteasome A and B subunits [Meiothermus ruber DSM 1279]
gi|290471062|gb|ADD28481.1| 20S proteasome A and B subunits [Meiothermus ruber DSM 1279]
Length = 183
Score = 226 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 89/172 (51%), Positives = 126/172 (73%), Gaps = 2/172 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAFT 70
+MH TTI+ VR+DGV IAGDGQV+LGQT+MK +A KVRRL +G+ I+ GFAG+ ADA T
Sbjct: 3 RMHGTTIVAVRRDGVTAIAGDGQVTLGQTIMKTSAVKVRRLEQGDGILVGFAGAVADALT 62
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
LLE+ E L L R+++E AK WR D+ LR+LEAM+++AD+ L+++G G+VL P
Sbjct: 63 LLEKFEGALSGAKGNLPRAAIETAKLWRTDRVLRSLEAMLVLADRDHLLLLSGNGEVLNP 122
Query: 131 ENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIV 181
+ V+A+GSGG YAL+AA+AL+ + SA +IA +A+ IA +I +YT+
Sbjct: 123 DEPVIAVGSGGPYALAAAKALLRYSSLSAPQIAEQAIRIAGEIDLYTSGQAT 174
>gi|309804147|ref|ZP_07698225.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LactinV 11V1-d]
gi|308163730|gb|EFO65999.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
iners LactinV 11V1-d]
Length = 174
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 80/173 (46%), Positives = 116/173 (67%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI VR G + IAGDGQV+LG+ V+ K+ A+KVRR+ ++ GFAG ADA +L +
Sbjct: 2 TTICAVRHKGKIAIAGDGQVTLGEKVIAKSTAKKVRRIYHNQVVVGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L RS+VE+A+ WR D L L+AM++ + L+I+G G+VLEP+ V
Sbjct: 62 LEGKLETYSGDLRRSTVEMAQGWRKDPTLAKLQAMMIAFNDKDLLLISGNGEVLEPDEDV 121
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG+YA +AA A++ A +IA++A+ IAA I V+T+ I+ + +
Sbjct: 122 VAIGSGGNYAQAAALAMIRHSSDMDACDIAKEAVLIAAGIDVFTDDKIISDEI 174
>gi|227879132|ref|ZP_03997016.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
JV-V01]
gi|256843165|ref|ZP_05548653.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
125-2-CHN]
gi|256850236|ref|ZP_05555665.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
MV-1A-US]
gi|262046372|ref|ZP_06019334.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
MV-3A-US]
gi|295692921|ref|YP_003601531.1| ATP-dependent protease hslvu, proteolytic subunit hslv
[Lactobacillus crispatus ST1]
gi|227861289|gb|EEJ68924.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
JV-V01]
gi|256614585|gb|EEU19786.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
125-2-CHN]
gi|256712873|gb|EEU27865.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
MV-1A-US]
gi|260573243|gb|EEX29801.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
MV-3A-US]
gi|295031027|emb|CBL50506.1| ATP-dependent protease HslVU, proteolytic subunit HslV
[Lactobacillus crispatus ST1]
Length = 174
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 81/173 (46%), Positives = 116/173 (67%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ ++ GFAG ADA +L +
Sbjct: 2 TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR D L+ L AM++ D L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFDDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ A+EIA +A+ IA+ I V+T+ IV + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHAKDMKADEIAHEAVKIASGIDVFTDDKIVTDEI 174
>gi|328950839|ref|YP_004368174.1| ATP-dependent protease HslVU, peptidase subunit [Marinithermus
hydrothermalis DSM 14884]
gi|328451163|gb|AEB12064.1| ATP-dependent protease HslVU, peptidase subunit [Marinithermus
hydrothermalis DSM 14884]
Length = 178
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 85/175 (48%), Positives = 122/175 (69%), Gaps = 2/175 (1%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
++H TTI+ VRK+GV IAGDGQV+LG TVMK A KVR+L +G+++ GFAG+ ADAFTL
Sbjct: 3 RLHGTTIIAVRKEGVTAIAGDGQVTLGHTVMKHGAVKVRKL-EGDVLVGFAGAVADAFTL 61
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
LE+ E++L + L R++VE K WR D+ LR+LEAM++ ADK L+++G G+V+ P+
Sbjct: 62 LEKFEEQLREAKGNLARAAVETVKLWRTDRVLRHLEAMLIAADKEQLLLLSGTGEVIAPD 121
Query: 132 NGVMAIGSG-GSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+A+GSG +A L + A EIAR+A+ IA +I +YTN N + T+
Sbjct: 122 EPVLAVGSGAAYALAAAKALLAHSALPAPEIAREALRIAGEIDLYTNGNATVLTV 176
>gi|315158156|gb|EFU02173.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
faecalis TX0312]
Length = 170
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 71/143 (49%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ H+TTI V KDG +AGDGQV++G++V MK A+KVRR+ ++ GFAGS ADAFT
Sbjct: 17 QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 76
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L E+ E KL +Y L R++VELA++WR + ++ LEAM+++ +K L+++G G+V+ P
Sbjct: 77 LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 136
Query: 131 ENGVMAIGSGGSYALSAARALMS 153
++G++AIGSGG++ALSAARA+ +
Sbjct: 137 DDGILAIGSGGNFALSAARAMKN 159
>gi|227903867|ref|ZP_04021672.1| ATP-dependent protease peptidase subunit [Lactobacillus acidophilus
ATCC 4796]
gi|227868258|gb|EEJ75679.1| ATP-dependent protease peptidase subunit [Lactobacillus acidophilus
ATCC 4796]
Length = 174
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 80/173 (46%), Positives = 117/173 (67%), Gaps = 3/173 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +VR +G IAGDGQV+LG+ V+ KA ARK+RR+ ++ GFAG ADA +L +
Sbjct: 2 TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAGGVADAVSLQDM 61
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
LE KLE Y L R++VE+A+ WR L+ L AM++ D L+I+G G+VLEP+ V
Sbjct: 62 LEGKLESYSGDLRRAAVEMAQAWRKYPTLQKLNAMLIAFDDKDLLLISGNGEVLEPDENV 121
Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+AIGSGG++A +AA A+ + A+EIA +A+ IA+ I V+T+ +IV + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHAKEMKADEIAHEAVKIASGIDVFTDDHIVTDEI 174
>gi|320450078|ref|YP_004202174.1| ATP-dependent protease HslVU, peptidase subunit [Thermus
scotoductus SA-01]
gi|320150247|gb|ADW21625.1| ATP-dependent protease HslVU, peptidase subunit [Thermus
scotoductus SA-01]
Length = 180
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 85/177 (48%), Positives = 122/177 (68%), Gaps = 2/177 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAF 69
+++H TTIL VRKDGV +AGDGQV+ GQTV+K A KVRRL G I+ GFAG ADA
Sbjct: 1 MEIHGTTILAVRKDGVTALAGDGQVTFGQTVLKRGAVKVRRLEVGEGILVGFAGGVADAL 60
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+LLER E+KL++ LL+ +VE AK WR D+ LR+L+AMI+ AD+ ++++G G+V+
Sbjct: 61 SLLERFEEKLKEAKGNLLKGAVETAKLWRTDRVLRHLQAMIIAADREGMVLLSGSGEVIT 120
Query: 130 PENGVMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
PE ++A+GSGG +A + SA EIA +A+ IAA++ +YT+ + + TL
Sbjct: 121 PEEPLLAVGSGGPYALAAAKALYRHSSLSAREIAEEALRIAAEVDLYTSGQVTVLTL 177
>gi|71416273|ref|XP_810173.1| hslvu complex proteolytic subunit-like [Trypanosoma cruzi strain CL
Brener]
gi|71664447|ref|XP_819204.1| hslvu complex proteolytic subunit-like [Trypanosoma cruzi strain CL
Brener]
gi|70874668|gb|EAN88322.1| hslvu complex proteolytic subunit-like, putative [Trypanosoma
cruzi]
gi|70884495|gb|EAN97353.1| hslvu complex proteolytic subunit-like, putative [Trypanosoma
cruzi]
Length = 209
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 88/179 (49%), Positives = 130/179 (72%), Gaps = 4/179 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
A + TTIL+VRK VV+ GD QV+LG+ ++ K++A K+R++ +I+ GFAGS+ADA
Sbjct: 14 ACQSRQTTILSVRKGDTVVLIGDRQVTLGERIVAKSSACKLRKI-NDDIVIGFAGSTADA 72
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
L+E+LE K+ ++P QL R++VELAKDWR D+ LR LEA +++ + TL I G G+V+
Sbjct: 73 IALMEKLENKVGEFPQQLTRAAVELAKDWRTDRALRRLEASLIVCGREETLEIDGQGNVI 132
Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
PE +G++AIGSGG++A +AARAL+ AE+IARKAM IA +I V++N + +E L
Sbjct: 133 TPESDGIVAIGSGGTFAKAAARALIDVDGYDAEKIARKAMRIATEIDVFSNEHWDVEIL 191
>gi|237736958|ref|ZP_04567439.1| ATP-dependent protease peptidase subunit [Fusobacterium mortiferum
ATCC 9817]
gi|229420820|gb|EEO35867.1| ATP-dependent protease peptidase subunit [Fusobacterium mortiferum
ATCC 9817]
Length = 182
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 95/178 (53%), Positives = 136/178 (76%), Gaps = 2/178 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ + ATTI+ V+KDG V +AGDGQV+ G+ V K+NA+K+R++ K NI+AGFAG++ADAF
Sbjct: 5 IMIKATTIIAVKKDGKVAMAGDGQVTFGEVVFKSNAKKIRKIEKYNIMAGFAGAAADAFA 64
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
L+++ E KLE++ L +S+VELAKDWR DK LR L+AM+++ADK LV++G GDV+EP
Sbjct: 65 LMDKFESKLEEFGGNLKKSAVELAKDWRNDKALRVLDAMLIVADKDTILVLSGNGDVIEP 124
Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
+ + AIGSGGSYA +AARAL+ E+IA +AM+IA ++C+YTN NI + +K
Sbjct: 125 DGDIAAIGSGGSYAYAAARALLLHGKDMPVEQIAIEAMAIAGEMCIYTNSNITYDVIK 182
>gi|219121376|ref|XP_002185913.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582762|gb|ACI65383.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 174
Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 90/162 (55%), Positives = 119/162 (73%), Gaps = 8/162 (4%)
Query: 29 IAGDGQVSLGQTVMKANARKVRRL-GKGN------IIAGFAGSSADAFTLLERLEKKLEQ 81
+ GDG VS G +K NA K+RR+ KG+ I GFAGS+ADAFTLLERLE KL++
Sbjct: 1 MMGDGMVSQGSIQVKPNAVKIRRIPHKGDDKEHQGTIVGFAGSTADAFTLLERLEMKLDE 60
Query: 82 YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
YP QL RS VELAK WR DKYLR LEA +++AD T++L +TG GDV+E +G++ +GSG
Sbjct: 61 YPGQLARSCVELAKGWRTDKYLRRLEASLIVADATVSLELTGNGDVIESHDGILGVGSGS 120
Query: 142 SYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVL 182
+A++AARALM + AE +ARKAM+IAAD+C+YTN ++
Sbjct: 121 PFAIAAARALMDSSDLDAEAVARKAMNIAADMCIYTNKEFLV 162
>gi|55980600|ref|YP_143897.1| ATP-dependent protease peptidase subunit [Thermus thermophilus HB8]
gi|55772013|dbj|BAD70454.1| heat shock protein HslV [Thermus thermophilus HB8]
Length = 188
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 84/179 (46%), Positives = 122/179 (68%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSAD 67
V++H TTIL VRKDGV +AGDGQV+ GQTV+K A KVR+L G ++ GFAG AD
Sbjct: 7 GGVEIHGTTILAVRKDGVTALAGDGQVTFGQTVLKRGAVKVRKLEVGEGVLVGFAGGVAD 66
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
A LLER E++L++ LL+ +VE AK WR D+ LR+L+AMI+ AD+ ++++G G+V
Sbjct: 67 ALALLERFEERLKEAKGNLLKGAVETAKLWRTDRVLRHLQAMIVAADRESMVLLSGSGEV 126
Query: 128 LEPENGVMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ PE ++A+GSGG +A T SA+EIA +A+ IAA++ +YT+ + + TL
Sbjct: 127 ITPEEPLLAVGSGGPYALAAAKALYRHTGLSAKEIATEALRIAAEVDLYTSGQVTVLTL 185
>gi|46198573|ref|YP_004240.1| ATP-dependent protease peptidase subunit [Thermus thermophilus
HB27]
gi|46196195|gb|AAS80613.1| ATP-dependent protease hslV [Thermus thermophilus HB27]
Length = 188
Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats.
Identities = 84/179 (46%), Positives = 122/179 (68%), Gaps = 2/179 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSAD 67
V++H TTIL VRKDGV +AGDGQV+ GQTV+K A KVR+L G ++ GFAG AD
Sbjct: 7 GGVEIHGTTILAVRKDGVTALAGDGQVTFGQTVLKRGAVKVRKLEVGEGVLVGFAGGVAD 66
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
A LLER E++L++ LL+ +VE AK WR D+ LR+L+AMI+ AD+ ++++G G+V
Sbjct: 67 AMALLERFEERLKEAKGNLLKGAVETAKLWRTDRVLRHLQAMIVAADRESMVLLSGSGEV 126
Query: 128 LEPENGVMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ PE ++A+GSGG +A T SA+EIA +A+ IAA++ +YT+ + + TL
Sbjct: 127 ITPEEPLLAVGSGGPYALAAAKALYRHTGLSAKEIATEALRIAAEVDLYTSGQVTVLTL 185
>gi|302841071|ref|XP_002952081.1| hypothetical protein VOLCADRAFT_92617 [Volvox carteri f.
nagariensis]
gi|300262667|gb|EFJ46872.1| hypothetical protein VOLCADRAFT_92617 [Volvox carteri f.
nagariensis]
Length = 390
Score = 216 bits (552), Expect = 9e-55, Method: Composition-based stats.
Identities = 82/162 (50%), Positives = 108/162 (66%), Gaps = 27/162 (16%)
Query: 27 VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
VV+ GDGQVS+G +K N RKVRR+G+G ++AGFAG++AD +LLERLE KLE++P QL
Sbjct: 2 VVMIGDGQVSVGTVTVKPNVRKVRRIGEG-VVAGFAGTAADGLSLLERLEMKLEEHPGQL 60
Query: 87 LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
LR++VELAK WR DK LR L+A +L+AD + TL I+G GDVLEP +GVM
Sbjct: 61 LRAAVELAKQWRQDKALRFLQAELLVADASTTLTISGNGDVLEPHDGVM----------- 109
Query: 147 AARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+KAM IAAD+C+YTN N +E++ V
Sbjct: 110 ---------------GKKAMKIAADMCIYTNDNFTVESISVE 136
>gi|158522507|ref|YP_001530377.1| ATP-dependent protease peptidase subunit [Desulfococcus oleovorans
Hxd3]
gi|158511333|gb|ABW68300.1| 20S proteasome A and B subunits [Desulfococcus oleovorans Hxd3]
Length = 185
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 88/174 (50%), Positives = 121/174 (69%), Gaps = 1/174 (0%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M +TTIL VR GV V+AGDGQV++ TV+K A+KVRR+ I+ G AG++ADA L
Sbjct: 12 MRSTTILAVRHRGVTVVAGDGQVTMEATVIKHGAKKVRRIYNDRIVVGIAGATADAMALS 71
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
ERLE KLE+Y L R++VELA++WR DKYL+ LEA+++ AD+ + +I+G GDV+EP+
Sbjct: 72 ERLESKLERYNGSLTRAAVELAREWRTDKYLKRLEALMIAADQEVMYLISGTGDVIEPDA 131
Query: 133 GVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+AIGSG + +A + + A IA+ AM+IAA ICVYTN I +E L
Sbjct: 132 PVLAIGSGSVAARAAALALVEHSDLDAAGIAKAAMAIAAAICVYTNDQITVEEL 185
>gi|218674879|ref|ZP_03524548.1| ATP-dependent protease peptidase subunit [Rhizobium etli GR56]
Length = 125
Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats.
Identities = 101/124 (81%), Positives = 114/124 (91%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G
Sbjct: 62 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121
Query: 136 AIGS 139
AIGS
Sbjct: 122 AIGS 125
>gi|68171726|ref|ZP_00545079.1| 20S proteasome, A and B subunits [Ehrlichia chaffeensis str.
Sapulpa]
gi|67998848|gb|EAM85547.1| 20S proteasome, A and B subunits [Ehrlichia chaffeensis str.
Sapulpa]
Length = 137
Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 70/119 (58%), Positives = 95/119 (79%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
+ M+ TTIL +R+ V+IAGDGQVSLG TV+K +A+K++RL +I GFAG++
Sbjct: 2 EHKDNSTMYGTTILCIRRGNKVIIAGDGQVSLGHTVIKNSAKKIKRLANDTVITGFAGAT 61
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
ADAFTL ERLE KLE++P QLLR+ VELAKDWRMD+YLR LEAM+++ADK+++L+I+G
Sbjct: 62 ADAFTLFERLESKLEKHPGQLLRACVELAKDWRMDRYLRRLEAMMIVADKSVSLIISGQ 120
>gi|297520978|ref|ZP_06939364.1| ATP-dependent protease peptidase subunit [Escherichia coli OP50]
Length = 113
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 68/112 (60%), Positives = 89/112 (79%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL +IAGFAG +ADAFTL E
Sbjct: 2 TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
E+KLE + L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV
Sbjct: 62 ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDV 113
>gi|217034383|ref|ZP_03439798.1| hypothetical protein HP9810_889g28 [Helicobacter pylori 98-10]
gi|216943178|gb|EEC22648.1| hypothetical protein HP9810_889g28 [Helicobacter pylori 98-10]
Length = 143
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 63/141 (44%), Positives = 95/141 (67%), Gaps = 2/141 (1%)
Query: 47 RKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL 106
+K+R L +++GFAGS+ADAF+L + E+ LE L +S V+ +K+WR DKYLR L
Sbjct: 3 QKIRSLYHNQVLSGFAGSTADAFSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRL 62
Query: 107 EAMILIADKTITLVITGMGDVLEPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARK 164
EAM+++ + +++G GDVLE E+ + AIGSGG++ALSAARAL S ++ +
Sbjct: 63 EAMMIVLNLDHIFILSGTGDVLEAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEE 122
Query: 165 AMSIAADICVYTNHNIVLETL 185
++ IA D+C+YTN NI + L
Sbjct: 123 SLKIAGDLCIYTNTNIKILEL 143
>gi|207108495|ref|ZP_03242657.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
HPKX_438_CA4C1]
Length = 147
Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats.
Identities = 66/139 (47%), Positives = 94/139 (67%), Gaps = 2/139 (1%)
Query: 29 IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
I GDGQV+LG V+KANA K+R L +++GFAGS+ADAF+L + E+ LE L +
Sbjct: 9 IGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADAFSLFDMFERILESKKGDLFK 68
Query: 89 SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-VMAIGSGGSYALSA 147
S V+ +K+WR DKYLR LEAM+++ + +++G GDVLE E+ + AIGSGG+YALSA
Sbjct: 69 SVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVLEAEDNKIAAIGSGGNYALSA 128
Query: 148 ARALMS-TQNSAEEIARKA 165
ARAL ++ ++
Sbjct: 129 ARALDHFAHLEPRKLVEES 147
>gi|255029340|ref|ZP_05301291.1| hypothetical protein LmonL_09813 [Listeria monocytogenes LO28]
Length = 450
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 62/110 (56%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
+++HATTI V+ DG +AGDGQV+LG++V MK A+KVRRL +IAGFAGS ADAF
Sbjct: 309 MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 368
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
TL E+ E KL +Y L R+SVELA+ WR D LR LEAM+++ DK L
Sbjct: 369 TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLL 418
>gi|297379707|gb|ADI34594.1| ATP-dependent protease hslV [Helicobacter pylori v225d]
Length = 136
Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats.
Identities = 60/136 (44%), Positives = 91/136 (66%), Gaps = 2/136 (1%)
Query: 52 LGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL 111
+ +++GFAGS+ADAF+L + E+ LE L +S V+ +K+WR DKYLR LEAM++
Sbjct: 1 MYHNQVLSGFAGSTADAFSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMI 60
Query: 112 IADKTITLVITGMGDVLEPENG-VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIA 169
+ + +++G GDVLE E+ + AIGSGG++ALSAARAL S ++ +++ IA
Sbjct: 61 VLNLDHIFILSGTGDVLEAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEESLKIA 120
Query: 170 ADICVYTNHNIVLETL 185
D+C+YTN NI + L
Sbjct: 121 GDLCIYTNTNIKILEL 136
>gi|289672015|ref|ZP_06492905.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
syringae FF5]
Length = 128
Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats.
Identities = 65/122 (53%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
ADAFTL ER E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG
Sbjct: 2 PPADAFTLFERFEAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITG 61
Query: 124 MGDVLEPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
GDV+EPE+G++A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +
Sbjct: 62 NGDVVEPEDGLIAMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITI 121
Query: 183 ET 184
E
Sbjct: 122 EE 123
>gi|229092870|ref|ZP_04224004.1| ATP-dependent protease hslV [Bacillus cereus Rock3-42]
gi|228690492|gb|EEL44275.1| ATP-dependent protease hslV [Bacillus cereus Rock3-42]
Length = 115
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 62/115 (53%), Positives = 87/115 (75%), Gaps = 3/115 (2%)
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
E KLE+Y L R++VE+AK WR DK LR LEAM+++ DKT L+++G G+V+EP++G
Sbjct: 1 MFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPDDG 60
Query: 134 VMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++AIGSGG+YALSA RAL +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 61 ILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 115
>gi|188519587|gb|ACD57532.1| ATP-dependent protease HslV [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 145
Score = 182 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 80/146 (54%), Positives = 111/146 (76%), Gaps = 3/146 (2%)
Query: 42 MKANARKVRRLG-KGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD 100
MK NARKVRRLG +G ++AGFAG++ADAFTL E E KL+++ QL R++VELAKDWR +
Sbjct: 1 MKGNARKVRRLGREGQVLAGFAGAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTE 59
Query: 101 KYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG-SYALSAARALMSTQNSAE 159
+ L LEA++ +ADK +L+I+G GDV+EPE+G++AIGSGG +A L T+ A+
Sbjct: 60 RRLGKLEALLAVADKETSLIISGTGDVIEPEDGIIAIGSGGAYALSAARALLAHTELDAK 119
Query: 160 EIARKAMSIAADICVYTNHNIVLETL 185
IA +A++IA DIC+YTN N+V+E L
Sbjct: 120 TIATEAINIAGDICIYTNRNVVVEEL 145
>gi|330886167|gb|EGH20068.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv. mori
str. 301020]
Length = 124
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 64/119 (53%), Positives = 87/119 (73%), Gaps = 1/119 (0%)
Query: 67 DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
DAFTL ER E +LE++ L+R++VELAKDWR D+ L LEAM+ +A+K +L+ITG GD
Sbjct: 1 DAFTLFERFEAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGD 60
Query: 127 VLEPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
V+EPE+G++A+GSGG +A L+ T SA EIA ++ IA DICV+TNHNI +E
Sbjct: 61 VVEPEDGLIAMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEE 119
>gi|75763960|ref|ZP_00743587.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74488553|gb|EAO52142.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 132
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 63/117 (53%), Positives = 78/117 (66%), Gaps = 5/117 (4%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
HATTI V +G +AGDGQV++G VMK ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRRLFQGKVLAGFAGSVADAFTL 63
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI----TLVITGM 124
E E KLE+Y L R++VE+AK WR DK LR LEAM + + I +LV+ G
Sbjct: 64 FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMAPLFNGLIPTYGSLVVQGT 120
>gi|25956178|emb|CAC82730.1| HslVU complex proteolytic subunit [Trypanosoma cruzi]
Length = 117
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 52/104 (50%), Positives = 78/104 (75%), Gaps = 2/104 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADA 68
A + TTIL+VRK VV+ GD QV+LG+ ++ K++A K+R++ +I+ GFAGS+ADA
Sbjct: 14 ACQSRQTTILSVRKGDTVVLIGDRQVTLGERIVAKSSACKLRKI-NDDIVIGFAGSTADA 72
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI 112
L+E+LE K+ ++P QL R++VELAKDWR D+ LR LEA +++
Sbjct: 73 IALMEKLENKVGEFPQQLTRAAVELAKDWRTDRALRRLEASLIV 116
>gi|309807627|ref|ZP_07701571.1| putative ATP-dependent protease HslVU, peptidase subunit
[Lactobacillus iners LactinV 01V1-a]
gi|308169124|gb|EFO71198.1| putative ATP-dependent protease HslVU, peptidase subunit
[Lactobacillus iners LactinV 01V1-a]
Length = 114
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
LE KLE Y L RS+VE+A+ WR D L L+AM++ + L+I+G G+VLEP+
Sbjct: 1 MLEGKLETYSGDLRRSTVEMAQGWRKDPTLAKLQAMMIAFNDKDLLLISGNGEVLEPDED 60
Query: 134 VMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
V+AIGSGG+YA +AA A++ A +IA++A+ IAA I V+T+ I + +
Sbjct: 61 VVAIGSGGNYAQAAALAMIRHSSDMDACDIAKEAVLIAAGIDVFTDDKITSDEI 114
>gi|307248793|ref|ZP_07530806.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306854720|gb|EFM86910.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 97
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 51/97 (52%), Positives = 76/97 (78%), Gaps = 2/97 (2%)
Query: 91 VELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARA 150
+ELAK+WR ++ LR LEAM+++A+++ L+++G GDV+EPE V+AIGSGG+YA +AA A
Sbjct: 1 MELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEQDVLAIGSGGNYAKAAALA 60
Query: 151 LMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
L+ TQ SA+EI +A+ IA DI +Y+NHN V+E +
Sbjct: 61 LLRTQNNLSAKEIVAEALKIAGDIDIYSNHNHVIEEV 97
>gi|167041854|gb|ABZ06595.1| hypothetical protein ALOHA_HF4000097M14ctg1g39 [uncultured marine
microorganism HF4000_097M14]
Length = 80
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 47/74 (63%), Positives = 59/74 (79%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
H TTI+ +RKD VV+AGDGQVSLG TV+K+ A KVR++ K N+IAGFAGS+ADAFTL
Sbjct: 7 WHGTTIVLIRKDKDVVVAGDGQVSLGNTVIKSTANKVRKIEKRNVIAGFAGSTADAFTLF 66
Query: 73 ERLEKKLEQYPNQL 86
ERLE KLE++ +
Sbjct: 67 ERLEAKLEKHAGNV 80
>gi|270603325|ref|ZP_06221603.1| ATP-dependent protease HslV [Haemophilus influenzae HK1212]
gi|270318187|gb|EFA29402.1| ATP-dependent protease HslV [Haemophilus influenzae HK1212]
Length = 58
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/57 (70%), Positives = 47/57 (82%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI++VR+ G VV+ GDGQVSLG TVMK NARKVRRL G ++AGFAG +ADAFTL
Sbjct: 2 TTIVSVRRKGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLF 58
>gi|297522054|ref|ZP_06940440.1| ATP-dependent protease peptidase subunit [Escherichia coli OP50]
Length = 69
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNI 180
TG GDV++PEN ++AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH
Sbjct: 1 TGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFH 60
Query: 181 VLETLK 186
+E L
Sbjct: 61 TIEELS 66
>gi|307248794|ref|ZP_07530807.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306854721|gb|EFM86911.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 71
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/64 (59%), Positives = 45/64 (70%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ VRKDG V I GDGQ +LG V K RKVRR+ K ++ GFAGS+ADAF L +
Sbjct: 2 TTIVCVRKDGKVAIGGDGQATLGNCVEKGTVRKVRRMYKDKVVTGFAGSTADAFILRDLF 61
Query: 76 EKKL 79
EKKL
Sbjct: 62 EKKL 65
>gi|330893830|gb|EGH26491.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
mori str. 301020]
Length = 54
Score = 99.4 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/53 (73%), Positives = 45/53 (84%)
Query: 22 RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
R+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++ADAFTL ER
Sbjct: 2 RRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFER 54
>gi|330893400|gb|EGH26061.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
mori str. 301020]
Length = 51
Score = 95.1 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 35/50 (70%), Positives = 43/50 (86%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG++
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGAT 51
>gi|289672016|ref|ZP_06492906.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae
pv. syringae FF5]
Length = 50
Score = 94.4 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL G +IAGFAG+
Sbjct: 2 TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGA 50
>gi|218659908|ref|ZP_03515838.1| ATP-dependent protease peptidase subunit [Rhizobium etli IE4771]
Length = 54
Score = 86.7 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/53 (71%), Positives = 46/53 (86%)
Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
AIGSGG++A +AARALM T SAEEIAR+A+ IAADICVYTNHN+V+E+L V
Sbjct: 1 AIGSGGNFAFAAARALMDTDKSAEEIARRALEIAADICVYTNHNLVVESLDVE 53
>gi|229092871|ref|ZP_04224005.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
[Bacillus cereus Rock3-42]
gi|228690493|gb|EEL44276.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
[Bacillus cereus Rock3-42]
Length = 49
Score = 79.0 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGN 56
HATTI V +G +AGDGQV++G VMK ARKVR+L +G
Sbjct: 4 FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGK 48
>gi|153880554|ref|ZP_02005004.1| ATP-dependent protease hslV [Beggiatoa sp. PS]
gi|152062982|gb|EDN64996.1| ATP-dependent protease hslV [Beggiatoa sp. PS]
Length = 40
Score = 68.6 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 151 LMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
+ +T SA+EI KA+ IAADIC+YTNHN+ +E+L
Sbjct: 1 MNNTTLSAQEIVEKALHIAADICIYTNHNLTIESLTTE 38
>gi|262202389|ref|YP_003273597.1| 20S proteasome A and subunit Bs [Gordonia bronchialis DSM 43247]
gi|302595826|sp|D0LDT1|PSB_GORB4 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|262085736|gb|ACY21704.1| 20S proteasome A and B subunits [Gordonia bronchialis DSM 43247]
Length = 292
Score = 65.1 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 30/183 (16%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + ++G + + +KV + AG AG++ A ++
Sbjct: 61 HGTTIVAVSYPGGVILAGDRRATMGNLIATRDVKKV-YITDEYSAAGIAGTAGIAIEMVR 119
Query: 74 RLEKKLEQYP----------NQLLRSSVELAKDWRMD--KYLRNLEA--MILIADKTI-- 117
+LE Y ++ R LA R + L+ L A +++ D
Sbjct: 120 LFAVELEHYEKLEGVPLTLDGKVSR----LASMVRGNLGAALQGLAAVPLLVGYDIDHDD 175
Query: 118 ------TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSI 168
GD E G AIGSG +A S+ + L A IA +A+
Sbjct: 176 PTERGRIFSFDVAGDRHEEFGGYQAIGSGSVFAKSSLKKLYRHDLDEASALAIAVEALYD 235
Query: 169 AAD 171
AAD
Sbjct: 236 AAD 238
>gi|149912217|ref|ZP_01900796.1| ATP-dependent protease peptidase subunit [Moritella sp. PE36]
gi|149804697|gb|EDM64748.1| ATP-dependent protease peptidase subunit [Moritella sp. PE36]
Length = 41
Score = 63.6 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 147 AARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
A L +T+ AEEIA+KA++IA +ICV+TN +ET+
Sbjct: 1 AMALLENTELDAEEIAKKALTIAGNICVFTNGFHTIETID 40
>gi|225716290|gb|ACO13991.1| Proteasome subunit beta type-9 precursor [Esox lucius]
Length = 216
Score = 62.0 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 17 GTTIIAVEFNGGVVLGSDSRVSAGETVVNRVMNKL-SLLHDKIYCALSGSAADAQTIAEM 75
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ +L+ + ++ +RS+ L K+ KY L A +++A G G V
Sbjct: 76 VNYQLDVHSIEIGEDPQVRSAATLVKN-ISYKYKEELSAHLIVAGWDR----RGGGQVFV 130
Query: 130 PENGV------MAIGSGGSYALSAARALMSTQNSAEE 160
NG+ GSG SY A S E+
Sbjct: 131 TLNGLLSRQPFAVGGSGSSYVYGFVDAEYQKGMSKED 167
>gi|225704686|gb|ACO08189.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
Length = 217
Score = 60.1 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKL-SLLHDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ +L+ + ++ +RS+ L K+ KY L A +++A G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKN-ISYKYKEELSAHLIVAGWDK----RGGGQVYV 131
Query: 130 PENGV------MAIGSGGSYALSAARALMSTQNSAEE 160
NG+ GSG SY A S E+
Sbjct: 132 TLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKED 168
>gi|59275971|dbj|BAD89557.1| proteasome subunit [Oncorhynchus mykiss]
Length = 217
Score = 60.1 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKL-SLLHDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ +L+ + ++ +RS+ L K+ KY L A +++A G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKN-ISYKYKEELSAHLIVAGWDK----RGGGQVYV 131
Query: 130 PENGV------MAIGSGGSYALSAARALMSTQNSAEE 160
NG+ GSG SY A S E+
Sbjct: 132 TLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKED 168
>gi|306494799|gb|ADM95871.1| PSMB9 [Oncorhynchus mykiss]
Length = 217
Score = 60.1 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKL-SLLHDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ +L+ + ++ +RS+ L K+ KY L A +++A G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKN-ISYKYKEELSAHLIVAGWDK----RGGGQVYV 131
Query: 130 PENGV------MAIGSGGSYALSAARALMSTQNSAEE 160
NG+ GSG SY A S E+
Sbjct: 132 TLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKED 168
>gi|59275960|dbj|BAD89547.1| proteasome subunit [Oncorhynchus mykiss]
gi|225704848|gb|ACO08270.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
Length = 217
Score = 60.1 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKL-SLLHDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ +L+ + ++ +RS+ L K+ KY L A +++A G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKN-ISYKYKEELSAHLIVAGWDK----RGGGQVYV 131
Query: 130 PENGV------MAIGSGGSYALSAARALMSTQNSAEE 160
NG+ GSG SY A S E+
Sbjct: 132 TLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKED 168
>gi|225705198|gb|ACO08445.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
Length = 217
Score = 59.7 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIELDGGVVLGSDSRVSAGETVVNRVMNKL-SLLHDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ +L+ + ++ +RS+ L K+ KY L A +++A G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKN-ISYKYKEELSAHLIVAGWDK----RGGGQVYV 131
Query: 130 PENGV------MAIGSGGSYALSAARALMSTQNSAEE 160
NG+ GSG SY A S E+
Sbjct: 132 TLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKED 168
>gi|185133857|ref|NP_001117174.1| proteasome subunit beta type-9 precursor [Salmo salar]
gi|185136351|ref|NP_001117186.1| proteasome subunit beta type-9 precursor [Salmo salar]
gi|21263915|sp|Q9DD33|PSB9_SALSA RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; Flags: Precursor
gi|12003001|gb|AAG43434.1|AF184932_1 low molecular mass protein 2 [Salmo salar]
gi|12003003|gb|AAG43435.1|AF184933_1 low molecular mass protein 2 [Salmo salar]
gi|12003005|gb|AAG43436.1|AF184934_1 low molecular mass protein 2 [Salmo salar]
gi|12003007|gb|AAG43437.1|AF184935_1 low molecular mass protein 2 [Salmo salar]
gi|12003009|gb|AAG43438.1|AF184936_1 low molecular mass protein 2 [Salmo salar]
gi|146147388|gb|ABQ01991.1| proteosome subunit beta type 9 [Salmo salar]
gi|148362122|gb|ABQ59649.1| PSMB9 [Salmo salar]
gi|148362160|gb|ABQ59682.1| PSMB9 [Salmo salar]
gi|209733640|gb|ACI67689.1| Proteasome subunit beta type-9 precursor [Salmo salar]
gi|209734580|gb|ACI68159.1| Proteasome subunit beta type-9 precursor [Salmo salar]
gi|262189357|gb|ACY30375.1| PSMB9 [Salmo salar]
Length = 217
Score = 59.7 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKL-SLLHDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ +L+ + ++ +RS+ L K+ KY L A +++A G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKN-ISYKYKEELSAHLIVAGWDK----RGGGQVYV 131
Query: 130 PENGV------MAIGSGGSYALSAARALMSTQNSAEE 160
NG+ GSG +Y A S E+
Sbjct: 132 TLNGLLSRQPFAVGGSGSAYVYGFVDAEYRKAMSKED 168
>gi|21263928|sp|Q9PT26|PSB9_ONCMY RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; Flags: Precursor
gi|5823094|gb|AAD53038.1|AF115541_1 low molecular mass protein 2 [Oncorhynchus mykiss]
Length = 217
Score = 59.7 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKL-SLLHDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ +L+ + ++ +RS+ L K+ KY +L A +++A G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKN-ISYKYKEDLSAHLIVAGWDK----RGGGQVYV 131
Query: 130 PENGV------MAIGSGGSYALSAARALMSTQNSAEE 160
NG+ GSG SY A S E+
Sbjct: 132 TLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKED 168
>gi|156617988|gb|ABU87864.1| proteasome subunit beta type 9 protein [Clupea pallasii]
Length = 217
Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 12/165 (7%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G +V+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIGIEYDGGVVLGSDSRVSAGASVVNRVMNKL-SLLHDKIYCALSGSAADAQTIAEI 76
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + + L+RS+ L K+ KY L A +++A D+ +
Sbjct: 77 VNYQLDVHSVELGEDSLVRSAATLVKN-ISYKYKEELSAHLIVAGWDRKKKGQVYVTMSG 135
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIA 169
L GSG SY A S E A+++A
Sbjct: 136 LLSRQPFAVGGSGSSYVYGFVDAEYRKDMSRRECQEFVVNALTLA 180
>gi|209737824|gb|ACI69781.1| Proteasome subunit beta type-9 precursor [Salmo salar]
gi|209738640|gb|ACI70189.1| Proteasome subunit beta type-9 precursor [Salmo salar]
Length = 217
Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKL-SLLHDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ +L+ + ++ +RS+ L K+ KY L A +++A G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKN-ISYKYKEELSAHLIVAGWDK----RGGGQVYV 131
Query: 130 PENGV------MAIGSGGSYALSAARALMSTQNSAEE 160
NG+ GSG +Y A S E+
Sbjct: 132 TLNGLLSRQSFAVGGSGSAYVYGFVDAEYRKAMSKED 168
>gi|185133551|ref|NP_001117730.1| proteasome subunit beta type-9 precursor [Oncorhynchus mykiss]
gi|4741816|gb|AAD28715.1|AF112117_1 low molecular mass polypeptide complex subunit 2 [Oncorhynchus
mykiss]
Length = 217
Score = 58.9 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+AD+ T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKL-SLLHDKIYCALSGSAADSQTIAEM 76
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ +L+ + ++ +RS+ L K+ KY L A +++A G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKN-ISYKYKEELSAHLIVAGWDK----RGGGQVYV 131
Query: 130 PENGV------MAIGSGGSYALSAARALMSTQNSAEE 160
NG+ GSG SY A S E+
Sbjct: 132 TLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKED 168
>gi|294628476|ref|ZP_06707036.1| 20S proteasome beta-subunit [Streptomyces sp. e14]
gi|292831809|gb|EFF90158.1| 20S proteasome beta-subunit [Streptomyces sp. e14]
Length = 281
Score = 58.5 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 71/179 (39%), Gaps = 27/179 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ V G VV+AGD + ++G + + + KV IAG AG + + L
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--ILIA----------DK 115
E E K+E L + L+ R + + AM + + DK
Sbjct: 112 FQLELEHFE-KVEGAQLSLEGKANRLSTMIRSNLGM----AMQGLAVVPLFAGYDVDRDK 166
Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E+G A GSG +A A + L S A + +A+ AAD
Sbjct: 167 GRIFSYDVTGGRSE-EHGYAATGSGSIFARGAMKKLYREDLSEAEATTLVVQALYDAAD 224
>gi|225709296|gb|ACO10494.1| Proteasome subunit beta type-9 precursor [Caligus rogercresseyi]
Length = 217
Score = 58.2 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKL-SLLHDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ +L+ + ++ +RS+ L K+ KY L A +++A G G V
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKN-ISYKYKEELSAHLIVAGWDK----RGGGQVYV 131
Query: 130 PENGV------MAIGSGGSY 143
NG+ GSG +Y
Sbjct: 132 TLNGLLSRQPFAVGGSGSAY 151
>gi|317124897|ref|YP_004099009.1| proteasome endopeptidase complex, beta component [Intrasporangium
calvum DSM 43043]
gi|315588985|gb|ADU48282.1| proteasome endopeptidase complex, beta component [Intrasporangium
calvum DSM 43043]
Length = 277
Score = 58.2 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+++ DG VV+AGD + ++G + + KV + G + G AG++ A L+
Sbjct: 52 HGTTIVSLLHDGGVVMAGDRRATMGNIIANRDMEKV-FIADGYSVVGIAGTAGIAVELIR 110
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 111 LYQVELEHY 119
>gi|108800096|ref|YP_640293.1| proteasome subunit beta [Mycobacterium sp. MCS]
gi|119869223|ref|YP_939175.1| proteasome subunit beta [Mycobacterium sp. KMS]
gi|126435720|ref|YP_001071411.1| proteasome subunit beta [Mycobacterium sp. JLS]
gi|123070021|sp|Q1B797|PSB_MYCSS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|302595769|sp|A3Q193|PSB_MYCSJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|302595770|sp|A1UHS7|PSB_MYCSK RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|108770515|gb|ABG09237.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01B [Mycobacterium sp. MCS]
gi|119695312|gb|ABL92385.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01B [Mycobacterium sp. KMS]
gi|126235520|gb|ABN98920.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01B [Mycobacterium sp. JLS]
Length = 304
Score = 58.2 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ ++ G VV+AGD + + G + + +KV + G AG++A A
Sbjct: 64 HGTTIVALKFPGGVVMAGDRRATQGNMIASRDVQKV-YITDDYTATGIAGTAAIAVEFAR 122
Query: 74 RLEKKLEQYPNQLLRSSVELA-KDWRMDKYLR-NLEA---------MILIADKTI----- 117
+LE Y +L ++ A K R+ +R NL A ++ D
Sbjct: 123 LYAVELEHYE-KLEGVALTFAGKVNRLATMVRGNLGAALQGFVALPLLAGFDLDDPDPQA 181
Query: 118 -----TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIA 169
+ G G LE E G ++GSG +A S+ + L +SA +A +A+ A
Sbjct: 182 AGRIVSFDAAG-GHNLE-EEGFQSVGSGSIFAKSSMKKLYHQVTDADSALRVAVEALYDA 239
Query: 170 AD 171
AD
Sbjct: 240 AD 241
>gi|323307196|gb|EGA60479.1| Pup1p [Saccharomyces cerevisiae FostersO]
Length = 261
Score = 57.8 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 21/168 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ + VVIA D + + G V N K+ R+ I AG++AD + +
Sbjct: 29 GTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISP-KIWCAGAGTAADTEAVTQL 87
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TG 123
+ +E + R S++++ K + KY ++ A +++A + I G
Sbjct: 88 IGSNIELHSLYTSREPRVVSALQMLKQ-HLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
DV +++GSG A++ + + EE A+ +A+D
Sbjct: 147 STDV----GYYLSLGSGSLAAMAVLESHWKQDLTKEE----AIKLASD 186
>gi|151945775|gb|EDN64016.1| putative proteasome subunit [Saccharomyces cerevisiae YJM789]
gi|190407475|gb|EDV10742.1| proteasome subunit [Saccharomyces cerevisiae RM11-1a]
gi|207341103|gb|EDZ69250.1| YOR157Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272796|gb|EEU07767.1| Pup1p [Saccharomyces cerevisiae JAY291]
gi|259149640|emb|CAY86444.1| Pup1p [Saccharomyces cerevisiae EC1118]
gi|323302911|gb|EGA56715.1| Pup1p [Saccharomyces cerevisiae FostersB]
gi|323331511|gb|EGA72926.1| Pup1p [Saccharomyces cerevisiae AWRI796]
gi|323335547|gb|EGA76832.1| Pup1p [Saccharomyces cerevisiae Vin13]
gi|323346562|gb|EGA80849.1| Pup1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352117|gb|EGA84654.1| Pup1p [Saccharomyces cerevisiae VL3]
Length = 261
Score = 57.8 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 21/168 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ + VVIA D + + G V N K+ R+ I AG++AD + +
Sbjct: 29 GTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISP-KIWCAGAGTAADTEAVTQL 87
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TG 123
+ +E + R S++++ K + KY ++ A +++A + I G
Sbjct: 88 IGSNIELHSLYTSREPRVVSALQMLKQ-HLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
DV +++GSG A++ + + EE A+ +A+D
Sbjct: 147 STDV----GYYLSLGSGSLAAMAVLESHWKQDLTKEE----AIKLASD 186
>gi|6324731|ref|NP_014800.1| Pup1p [Saccharomyces cerevisiae S288c]
gi|130879|sp|P25043|PSB7_YEAST RecName: Full=Proteasome component PUP1; AltName: Full=Macropain
subunit PUP1; AltName: Full=Multicatalytic endopeptidase
complex subunit PUP1; AltName: Full=Proteinase YSCE
subunit PUP1; Flags: Precursor
gi|323462943|pdb|3NZJ|H Chain H, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462957|pdb|3NZJ|V Chain V, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462971|pdb|3NZW|H Chain H, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462985|pdb|3NZW|V Chain V, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462999|pdb|3NZX|H Chain H, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463013|pdb|3NZX|V Chain V, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|4250|emb|CAA43492.1| PUP1 [Saccharomyces cerevisiae]
gi|1293717|gb|AAC49643.1| Pup1p [Saccharomyces cerevisiae]
gi|1420391|emb|CAA99363.1| PUP1 [Saccharomyces cerevisiae]
gi|285815037|tpg|DAA10930.1| TPA: Pup1p [Saccharomyces cerevisiae S288c]
Length = 261
Score = 57.8 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 21/168 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ + VVIA D + + G V N K+ R+ I AG++AD + +
Sbjct: 29 GTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISP-KIWCAGAGTAADTEAVTQL 87
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TG 123
+ +E + R S++++ K + KY ++ A +++A + I G
Sbjct: 88 IGSNIELHSLYTSREPRVVSALQMLKQ-HLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
DV +++GSG A++ + + EE A+ +A+D
Sbjct: 147 STDV----GYYLSLGSGSLAAMAVLESHWKQDLTKEE----AIKLASD 186
>gi|225705212|gb|ACO08452.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
Length = 156
Score = 57.4 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G+TV+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKL-SLLHDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA 113
+ +L+ + ++ +RS+ L K+ KY L A +++A
Sbjct: 77 VNYQLDVHSIEVGEDPQVRSAATLVKN-ISYKYKEELSAHLIVA 119
>gi|255717793|ref|XP_002555177.1| KLTH0G03168p [Lachancea thermotolerans]
gi|238936561|emb|CAR24740.1| KLTH0G03168p [Lachancea thermotolerans]
Length = 263
Score = 57.4 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG V+IA D + + G V N K+ R+ I AG++AD + +
Sbjct: 29 GTTIVGVKYDGGVLIAADTRSTQGPIVANKNCAKLHRISP-KIWCAGAGTAADTEEVTKL 87
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKT----ITLVITGMG 125
+ LE + R S++++ K + KY ++ A +++A I G
Sbjct: 88 IGSNLELHSMYASREPRVVSALQMLKQ-HLFKYQGHIGAYLIVAGADPTGTHLFSIHAHG 146
Query: 126 DVLEPENGVM-AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
+ G ++GSG A++ A EE AM +A+D
Sbjct: 147 ST---DVGFYQSLGSGSLAAMAVLEANWRPDLKKEE----AMQLASD 186
>gi|302561549|ref|ZP_07313891.1| 20S proteasome, beta subunit [Streptomyces griseoflavus Tu4000]
gi|302479167|gb|EFL42260.1| 20S proteasome, beta subunit [Streptomyces griseoflavus Tu4000]
Length = 281
Score = 57.0 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 70/179 (39%), Gaps = 27/179 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ V G VV+AGD + ++G + + + KV IAG AG + + L
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--ILIA----------DK 115
E E K+E L + L+ R + + AM + + DK
Sbjct: 112 FQLELEHFE-KVEGAQLSLEGKANRLSTMIRSNLGM----AMQGLAVVPLFAGYDVDRDK 166
Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E G A GSG +A A + L S A + +A+ AAD
Sbjct: 167 GRIFSYDVTGGRSE-EQGYAATGSGSIFARGAMKKLFRDDLSESEATTLVVQALYDAAD 224
>gi|50302329|ref|XP_451099.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640230|emb|CAH02687.1| KLLA0A02233p [Kluyveromyces lactis]
Length = 262
Score = 57.0 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 21/168 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ +G V+IA D + + G V N K+ R+ I AG++AD + +
Sbjct: 30 GTTIVGVKFNGGVIIAADTRSTQGPIVADKNCEKLHRIAP-RIWCAGAGTAADTEAVTQL 88
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKT----ITLVI--TG 123
+ +E + + R SS+++ K + KY ++ A +++A I G
Sbjct: 89 ISSNIELHSLYTGREPRVVSSLQMLKQ-HLFKYQGHIGAYLIVAGVDPTGAHLFSIHAHG 147
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
DV ++GSG A++ A + S EE A+ +A+D
Sbjct: 148 STDV----GYYQSLGSGSLAAMAVLEANWNQDLSKEE----AIKLASD 187
>gi|254819642|ref|ZP_05224643.1| PrcB [Mycobacterium intracellulare ATCC 13950]
Length = 292
Score = 57.0 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 37/187 (19%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ ++ G VV+AGD + + G + + +KV + G AG++A A
Sbjct: 56 HGTTIVALKYPGGVVLAGDRRSTQGNMIAGRDVKKV-YITDDYTATGIAGTAAIAVEFAR 114
Query: 74 RLEKKLEQYP----------NQLLRSSV----ELAKDWRMDKYLRNLEAM-ILI------ 112
+LE Y ++ R ++ LA ++ L A+ +L+
Sbjct: 115 LYAVELEHYEKLEGVPLTFAGKVNRLAIMVRGNLAA------AMQGLVALPLLVGYDIDA 168
Query: 113 -----ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARK 164
A + ++ G + LE E G ++GSG +A S+ + L S +SA +A +
Sbjct: 169 PDPEGAGRIVSFDAAGGWN-LEEEEGYQSVGSGSIFAKSSMKKLYSQVTDADSAVRVAIE 227
Query: 165 AMSIAAD 171
A+ AAD
Sbjct: 228 ALYDAAD 234
>gi|58220850|dbj|BAB83845.1| PSMB9 [Oryzias latipes]
gi|295901522|dbj|BAJ07278.1| proteasome subunit, beta type 9 [Oryzias latipes]
Length = 216
Score = 57.0 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + +G VV+ D +VS G +V+ K+ L I +GS+ADA T+ E
Sbjct: 17 GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEM 75
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA-----DKTITLVITGM 124
+ +L+ + ++ +RS+ L K+ KY L A +++A D G
Sbjct: 76 VNYQLDVHSLEIDEDPQVRSAATLVKN-ISYKYKEELSAHLIVAGWDRRDGGQVFATLGG 134
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+P GSG SY A + EE
Sbjct: 135 LLTRQP---FAIGGSGSSYVYGFVDAEYRRGMTKEE 167
>gi|10803373|emb|CAC13120.1| low molecular mass polypeptide subunit PSMB9 [Takifugu rubripes]
Length = 216
Score = 57.0 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V D VV+ D +VS G+ V+ K+ L I +GS+ADA T+ E
Sbjct: 17 GTTIIAVEFDDGVVLGSDSRVSAGKAVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEI 75
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + + L+RS+ L K+ KY L A +++A DK + +
Sbjct: 76 VNYQLDVHSVEIGEDPLVRSAANLVKN-ISYKYKEELMAHLIVAGWDKRKGGQVFATLNG 134
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
L GSG SY A S EE
Sbjct: 135 LLTRQPFAVGGSGSSYVYGFVDAEYRKGMSKEE 167
>gi|21263862|sp|Q8UW64|PSB9_ORYLA RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; Flags: Precursor
gi|18478982|dbj|BAB84548.1| PSMB9 [Oryzias latipes]
gi|62122593|dbj|BAD93261.1| PSMB9 [Oryzias latipes]
gi|295901494|dbj|BAJ07258.1| proteasome subunit, beta type 9 [Oryzias latipes]
gi|295901520|dbj|BAJ07277.1| proteasome subunit, beta type 9 [Oryzias latipes]
gi|295901524|dbj|BAJ07279.1| proteasome subunit, beta type 9 [Oryzias latipes]
Length = 217
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + +G VV+ D +VS G +V+ K+ L I +GS+ADA T+ E
Sbjct: 18 GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEM 76
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA-----DKTITLVITGM 124
+ +L+ + ++ +RS+ L K+ KY L A +++A D G
Sbjct: 77 VNYQLDVHSLEIDEDPQVRSAATLVKN-ISYKYKEELSAHLIVAGWDRRDGGQVFATLGG 135
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+P GSG SY A + EE
Sbjct: 136 LLTRQP---FAIGGSGSSYVYGFVDAEYRRGMTKEE 168
>gi|309807631|ref|ZP_07701575.1| ATP-dependent protease subunit ClpQ domain protein [Lactobacillus
iners LactinV 01V1-a]
gi|308169128|gb|EFO71202.1| ATP-dependent protease subunit ClpQ domain protein [Lactobacillus
iners LactinV 01V1-a]
Length = 41
Score = 56.6 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARK 48
TTI VR G + IAGDGQV+LG+ V+ K+ A+K
Sbjct: 2 TTICAVRHKGKIAIAGDGQVTLGEKVIAKSTAKK 35
>gi|224473831|gb|ACN49170.1| antigen processing proteasome-associated protein [Oryzias
luzonensis]
Length = 216
Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + +G VV+ D +VS G +V+ K+ L I +GS+ADA T+ E
Sbjct: 17 GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEM 75
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA-----DKTITLVITGM 124
+ +L+ + ++ +RS+ L K+ KY L A +++A D G
Sbjct: 76 VNYQLDVHSLEIGEDPQVRSAATLVKN-ISYKYKEELSAHLIVAGWDRRDGGQVFATLGG 134
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+P GSG SY A + EE
Sbjct: 135 LLTRQP---FAIGGSGSSYVYGFVDAEYRRGMTKEE 167
>gi|2055311|dbj|BAA19766.1| LMP2 [Oryzias latipes]
Length = 213
Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + +G VV+ D +VS G +V+ K+ L I +GS+ADA T+ E
Sbjct: 14 GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPL-HDRIYCALSGSAADAQTIAEM 72
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA-----DKTITLVITGM 124
+ +L+ + ++ +RS+ L K+ KY L A +++A D G
Sbjct: 73 VNYQLDVHSLEIDEDPQVRSAATLVKN-ISYKYKEELSAHLIVAGWDRRDGGQVFATLGG 131
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+P GSG SY A + EE
Sbjct: 132 LLTRQP---FAIGGSGSSYVYGFVDAEYRRGMTKEE 164
>gi|307330758|ref|ZP_07609894.1| 20S proteasome A and B subunits [Streptomyces violaceusniger Tu
4113]
gi|306883561|gb|EFN14611.1| 20S proteasome A and B subunits [Streptomyces violaceusniger Tu
4113]
Length = 281
Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 67/187 (35%), Gaps = 43/187 (22%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G VV+AGD + ++G + + + KV G AG++ A +++
Sbjct: 52 HGTTIVAVSFPGGVVLAGDRRATMGNVIAQRDIEKVFP-ADEYSAVGIAGTAGIAVEMVK 110
Query: 74 RLEKKLEQY---------------------PNQLLR-----SSVELAKDWRMDKYLRNLE 107
+ +LE + L + V L W +D+
Sbjct: 111 LFQLELEHFEKVEGTVLSLEGKANRLSTMIRGNLGMAMQGLAVVPLFAGWDVDR------ 164
Query: 108 AMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARK 164
+K G E E G A GSG +A A + L + A +
Sbjct: 165 ------EKGRIFSYDVTGGRSE-ERGFAATGSGSMFARGALKKLYRQDLTEEQAATAVLQ 217
Query: 165 AMSIAAD 171
A+ AAD
Sbjct: 218 ALYDAAD 224
>gi|289643904|ref|ZP_06476008.1| 20S proteasome A and B subunits [Frankia symbiont of Datisca
glomerata]
gi|289506290|gb|EFD27285.1| 20S proteasome A and B subunits [Frankia symbiont of Datisca
glomerata]
Length = 274
Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 21/176 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + ++G + + + KV G+AG++ L+
Sbjct: 51 HGTTIVAVTYPGGVMMAGDRRATMGNVIAQRDVEKVFH-ADEYSCVGYAGTAGIGADLVR 109
Query: 74 RLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLRN-----LEAMILI---------ADKTIT 118
+ +LE Y ++ S++ L AK R+ ++N L+ + +I A K
Sbjct: 110 LFQVELEHYE-KIEGSTLSLHAKANRLSFMIKNNLGLALQGLAVIPLYAGYDLDAGKGRI 168
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAAD 171
G E E+G AIGSG +A A + + + +E R +A+ AAD
Sbjct: 169 FSYDITGSRAE-EHGFQAIGSGSVFARGALKKKVRDDLTQDETVRVAVEALYDAAD 223
>gi|120404421|ref|YP_954250.1| 20S proteasome, A and B subunits [Mycobacterium vanbaalenii PYR-1]
gi|302595775|sp|A1TAP4|PSB_MYCVP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|119957239|gb|ABM14244.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01B [Mycobacterium vanbaalenii
PYR-1]
Length = 306
Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 30/183 (16%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL-- 71
H TTI+ ++ G VV+AGD + + G + + +KV + + G AG++A A
Sbjct: 66 HGTTIVALKCPGGVVMAGDRRATQGNMIASRDVQKV-YITDDYTVTGIAGTAAIAVEFAR 124
Query: 72 --------LERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIADKT----- 116
E+LE +P ++ R LA R + L+ A+ L+A
Sbjct: 125 LYAVELEHYEKLEGVALTFPGKVNR----LATMVRGNLGAALQGFVALPLLAGYDLDDPN 180
Query: 117 -----ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSI 168
+ G E G ++GSG +A S+ + L S AE +A +A+
Sbjct: 181 PEAAGRIVSFDAAGGWNFEEEGYQSVGSGSIFAKSSMKKLYSQVTDAESALRVAVEALYD 240
Query: 169 AAD 171
AAD
Sbjct: 241 AAD 243
>gi|18859275|ref|NP_571466.1| proteasome subunit beta type-9 [Danio rerio]
gi|5833461|gb|AAD53519.1|AF155579_1 proteasome subunit beta 9A [Danio rerio]
gi|29561856|emb|CAD87789.1| proteasome (prosome, macropain) subunit, beta type, 9a [Danio
rerio]
gi|50416819|gb|AAH78384.1| Proteasome (prosome, macropain) subunit, beta type, 9a [Danio
rerio]
gi|94732367|emb|CAK04958.1| proteasome (prosome, macropain) subunit, beta type, 9a [Danio
rerio]
Length = 218
Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 24/171 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D +VS G++V+ K+ L I +GS+ADA T+ E
Sbjct: 19 GTTIIAVTFDGGVVIGSDSRVSAGESVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEI 77
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + + L+ S+ L K+ KY L A +++A DK G G V
Sbjct: 78 VNYQLDVHSIEVEDDPLVCSAATLVKN-ISYKYKEELSAHLIVAGWDKK------GGGQV 130
Query: 128 LEPENGV------MAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIA 169
+G+ GSG Y A + E A+++A
Sbjct: 131 YATLSGLLTKQPFAIGGSGSFYINGFVDAEYKKNMTKRECQEFVVNALTLA 181
>gi|145223664|ref|YP_001134342.1| 20S proteasome, A and B subunits [Mycobacterium gilvum PYR-GCK]
gi|315443990|ref|YP_004076869.1| proteasome endopeptidase complex, beta component [Mycobacterium sp.
Spyr1]
gi|302595765|sp|A4TB64|PSB_MYCGI RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|145216150|gb|ABP45554.1| proteasome endopeptidase complex, beta component. Threonine
peptidase. MEROPS family T01B [Mycobacterium gilvum
PYR-GCK]
gi|315262293|gb|ADT99034.1| proteasome endopeptidase complex, beta component [Mycobacterium sp.
Spyr1]
Length = 303
Score = 56.2 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 34/185 (18%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL-- 71
H TTI+ ++ G VV+AGD + + G + + +KV + + G AG++A A
Sbjct: 63 HGTTIVALKFPGGVVMAGDRRATQGHMIASRDVQKV-YITDDYTVTGIAGTAAIAVEFAR 121
Query: 72 --------LERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIA--DKTI-- 117
E+LE +P ++ R LA R + L+ A+ L+A D
Sbjct: 122 LYAVELEHYEKLEGVALTFPGKVNR----LATMVRGNLGAALQGFVALPLLAGYDLDDPN 177
Query: 118 --------TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAM 166
+ G G LE E G ++GSG +A S+ + L S +SA +A +A+
Sbjct: 178 PEGAGRIVSFDAAG-GHNLE-EEGYQSVGSGSIFAKSSMKKLYSQVTDADSALRVAIEAL 235
Query: 167 SIAAD 171
AAD
Sbjct: 236 YDAAD 240
>gi|290961684|ref|YP_003492866.1| 20S proteasome subunit beta precursor [Streptomyces scabiei 87.22]
gi|302595789|sp|C9Z4D0|PSB_STRSW RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|260651210|emb|CBG74332.1| 20S proteasome beta-subunit precursor [Streptomyces scabiei 87.22]
Length = 281
Score = 55.9 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 27/179 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ V G VV+AGD + ++G + + + KV IAG AG + + L
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--ILIA----------DK 115
E E K+E L + L+ R + + AM + + ++
Sbjct: 112 FQLELEHFE-KVEGAQLSLEGKANRLSTMIRSNLGM----AMQGLAVVPLFAGYDVDRNR 166
Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD 171
G E E+G A GSG +A A + L A + +A+ AAD
Sbjct: 167 GRIFSYDVTGGRSE-ESGYAATGSGSIFARGAMKKLFRADLSEADATTLVVQALYDAAD 224
>gi|117928395|ref|YP_872946.1| proteasome subunit beta [Acidothermus cellulolyticus 11B]
gi|302595815|sp|A0LU50|PSB_ACIC1 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|117648858|gb|ABK52960.1| proteasome endopeptidase complex, beta component [Acidothermus
cellulolyticus 11B]
Length = 290
Score = 55.9 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 25/180 (13%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G VV+AGD + ++G + + + KV + + + + G AGS+ A ++
Sbjct: 57 HGTTIVAVAYQGGVVMAGDRRATMGNVIAQRDIEKVFQTDEHSCV-GIAGSAGIALEVVR 115
Query: 74 RLEKKLEQY---PN---QLLRSSVELAKDWRMDKYLRNLEAMILI---------AD---- 114
+ +LE Y L + LA R + + L+ + ++ AD
Sbjct: 116 LFQVELEHYEKLQGTTLSLEGKANRLAMMIRANLPMA-LQGLAVVPLFAGYDLFADDPQR 174
Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAAD 171
G E E+ A+GSG ++A A + L R +A+ AAD
Sbjct: 175 AGRIFSFDVTGGRYE-EHSFHAVGSGSTFARGALKKLFRDDFDEPHAVRTCIEALYDAAD 233
>gi|302550295|ref|ZP_07302637.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces viridochromogenes DSM 40736]
gi|302467913|gb|EFL31006.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces viridochromogenes DSM 40736]
Length = 281
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 21/176 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ V G VV+AGD + ++G + + + KV IAG AG + + L
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTI--T 118
E E K+E L + L+ R + + ++ + ++ D+
Sbjct: 112 FQLELEHFE-KVEGAQLSLEGKANRLSTMIRSNLGMA-MQGLAVVPLFAGYDVDREKGRI 169
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD 171
G E E G A GSG +A A + L A + +A+ AAD
Sbjct: 170 FSYDVTGGRSE-EQGYAATGSGSIFARGAMKKLFRNDLSEADATTLVVQALYDAAD 224
>gi|3114277|pdb|1RYP|I Chain I, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114291|pdb|1RYP|W Chain W, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513420|pdb|1G65|H Chain H, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513434|pdb|1G65|V Chain V, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513999|pdb|1G0U|H Chain H, A Gated Channel Into The Proteasome Core Particle
gi|11514013|pdb|1G0U|V Chain V, A Gated Channel Into The Proteasome Core Particle
gi|20150384|pdb|1JD2|H Chain H, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non-Covalent Proteasome Inhibitor
gi|20150391|pdb|1JD2|O Chain O, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non-Covalent Proteasome Inhibitor
gi|75765707|pdb|1Z7Q|I Chain I, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765721|pdb|1Z7Q|W Chain W, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|93279375|pdb|2F16|H Chain H, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279389|pdb|2F16|V Chain V, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279663|pdb|2FNY|H Chain H, Homobelactosin C Bound To The Yeast 20s Proteasome
gi|93279677|pdb|2FNY|V Chain V, Homobelactosin C Bound To The Yeast 20s Proteasome
gi|99032209|pdb|2FAK|H Chain H, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032223|pdb|2FAK|V Chain V, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490850|pdb|2GPL|H Chain H, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490864|pdb|2GPL|V Chain V, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|190016374|pdb|3D29|H Chain H, Proteasome Inhibition By Fellutamide B
gi|190016388|pdb|3D29|V Chain V, Proteasome Inhibition By Fellutamide B
gi|197725328|pdb|3E47|H Chain H, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725342|pdb|3E47|V Chain V, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939219|pdb|3DY3|H Chain H, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939233|pdb|3DY3|V Chain V, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939247|pdb|3DY4|H Chain H, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939261|pdb|3DY4|V Chain V, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828244|pdb|3GPJ|H Chain H, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828258|pdb|3GPJ|V Chain V, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588328|pdb|3GPT|H Chain H, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588342|pdb|3GPT|V Chain V, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588356|pdb|3GPW|H Chain H, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588370|pdb|3GPW|V Chain V, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588550|pdb|3HYE|H Chain H, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588564|pdb|3HYE|V Chain V, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|298508230|pdb|1VSY|I Chain I, Proteasome Activator Complex
gi|298508244|pdb|1VSY|W Chain W, Proteasome Activator Complex
gi|298508446|pdb|3L5Q|M Chain M, Proteasome Activator Complex
gi|298508460|pdb|3L5Q|Y Chain Y, Proteasome Activator Complex
gi|330689388|pdb|3MG4|H Chain H, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689402|pdb|3MG4|V Chain V, Structure Of Yeast 20s Proteasome With Compound 1
Length = 222
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V+ + VVIA D + + G V N K+ R+ I AG++AD + + +
Sbjct: 1 TTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISP-KIWCAGAGTAADTEAVTQLI 59
Query: 76 EKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TGM 124
+E + R S++++ K + KY ++ A +++A + I G
Sbjct: 60 GSNIELHSLYTSREPRVVSALQMLKQ-HLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGS 118
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
DV +++GSG A++ + + EE A+ +A+D
Sbjct: 119 TDV----GYYLSLGSGSLAAMAVLESHWKQDLTKEE----AIKLASD 157
>gi|317507302|ref|ZP_07965044.1| proteasome A-type and B-type [Segniliparus rugosus ATCC BAA-974]
gi|316254405|gb|EFV13733.1| proteasome A-type and B-type [Segniliparus rugosus ATCC BAA-974]
Length = 279
Score = 55.5 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 20/177 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G V+IAGD + + G + +KV L AG AG+ A AF L+
Sbjct: 55 HGTTIVALTYAGGVLIAGDRRATSGNLISHDEMQKV-YLTDEYSAAGIAGTVAIAFELVR 113
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLR-NLEA---------MILIADKTI------ 117
+LE Y + K R+ +R NLEA +++ D
Sbjct: 114 LFAVELEHYEKVEGVALTFSGKANRLAAMVRGNLEAAMQGLAAVPLLVGLDPDDAEPKGR 173
Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
+ G E ++G +IGSGG +A S + L Q A A +A++ A +
Sbjct: 174 IVSYDAAGGRFEEQSGYHSIGSGGLFARSTLKRLHDPQADRTAALRAAVEALADAGE 230
>gi|291440639|ref|ZP_06580029.1| 20S proteasome beta-subunit [Streptomyces ghanaensis ATCC 14672]
gi|291343534|gb|EFE70490.1| 20S proteasome beta-subunit [Streptomyces ghanaensis ATCC 14672]
Length = 281
Score = 55.5 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 70/179 (39%), Gaps = 27/179 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ V G VV+AGD + ++G + + + KV IAG AG + + L
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--ILIA----------DK 115
E E K+E L + L+ R + + AM + + D+
Sbjct: 112 FQLELEHFE-KVEGAQLSLEGKANRLSTMIRSNLGM----AMQGLAVVPLFAGYDVDRDQ 166
Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E G A GSG +A A + L S A + +A+ AAD
Sbjct: 167 GRIFSYDVTGGRSE-EQGYAATGSGSIFARGAMKKLFRDDLSEAEATTLVVQALYDAAD 224
>gi|18124172|gb|AAL59853.1|AF357921_1 proteasome beta-subunit [Heterodontus francisci]
Length = 217
Score = 55.5 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 15/156 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D +VS G+ V K+ L + I +GS+ADA + +
Sbjct: 18 GTTIIAVEFDGGVVIGSDSRVSAGEAVCNRVMNKLSVLHE-RIYCALSGSAADAQAIADS 76
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVITGM 124
+ +LE + L+R++ + K+ KY L A +++A D+ G
Sbjct: 77 VNYQLELHSIEVDDAPLVRAAASMVKN-ISYKYKEELSAHLIVAGWDRKKRGQVYATLGG 135
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
V +P GSG Y A S +E
Sbjct: 136 MLVRQP---FAVGGSGSVYIYGYVDAAYKAGMSKDE 168
>gi|318037293|ref|NP_001187911.1| proteasome subunit beta type-9-a like protein [Ictalurus punctatus]
gi|308324307|gb|ADO29288.1| proteasome subunit beta type-9-a like protein [Ictalurus punctatus]
Length = 214
Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 28/174 (16%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
TTI+ V+ +G V+I D + S+G + + + A + +L I AGS ADA +
Sbjct: 13 GTTIVAVKYNGGVIIGSDSRASVGGSYVSSKA--INKLIQVHDRIFCCIAGSLADAQHVT 70
Query: 73 ERLEKKLEQYPNQ-----LLRSSVELAKDW----RMDKYLRNLEAMILIA--DKT---IT 118
+ +L + Q L++++ + K+ R D LEA + A DK
Sbjct: 71 RVAKFQLSFHSIQMGSPPLVKAAATVLKELCYSNRED-----LEAGFITAGWDKKKGPQV 125
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
++ G ++ GSG +Y A S EE + A+++A
Sbjct: 126 YTVSMGGMLI--SQPFTIGGSGSTYMYGYMDAKYKPDMSREECVQFVKNALALA 177
>gi|255029339|ref|ZP_05301290.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
LO28]
Length = 30
Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 156 NSAEEIARKAMSIAADICVYTNHNIVLETL 185
A++IAR A+ IA++ICV+TN +I +E L
Sbjct: 1 MEAKDIARHALEIASEICVFTNDHITVEEL 30
>gi|256376367|ref|YP_003100027.1| 20S proteasome A and B subunits [Actinosynnema mirum DSM 43827]
gi|302595817|sp|C6WID8|PSB_ACTMD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|255920670|gb|ACU36181.1| 20S proteasome A and B subunits [Actinosynnema mirum DSM 43827]
Length = 282
Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 28/182 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G VVIAGD + ++G + + + +KV + G AG++ A ++
Sbjct: 54 HGTTIVALTFKGGVVIAGDRRATMGNVIAQRDMKKV-FVTDDYSAVGIAGTAGIAIEIVR 112
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMIL--------------IADK 115
+L Y V L+ D + ++ NL+A + AD
Sbjct: 113 LFAVELRHYE---KIEGVSLSLDGKANRLSGMVKGNLDAALAGLAVVPLFVGYDTDAADP 169
Query: 116 T---ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIA 169
+ G E G ++GSG +A SA + L AE R +A+ A
Sbjct: 170 DRAGRIVSYDVTGARFEETLGYQSVGSGSLFAKSALKKLYDPDADAEGAVRAAVEALYDA 229
Query: 170 AD 171
AD
Sbjct: 230 AD 231
>gi|182892146|gb|AAI65916.1| Psmb9a protein [Danio rerio]
Length = 218
Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 21/159 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D +VS G++V+ K+ L I GS+ADA T+ E
Sbjct: 19 GTTIIAVTFDGGVVIGSDSRVSAGESVVNRVMNKLSPL-HDKIYCALTGSAADAQTIAEI 77
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + + L+ S+ L K+ KY L A +++A DK G G V
Sbjct: 78 VNYQLDVHSIEVEDDPLVCSAATLVKN-ISYKYKEELSAHLIVAGWDKK------GGGQV 130
Query: 128 LEPENGV------MAIGSGGSYALSAARALMSTQNSAEE 160
+G+ GSG Y A + E
Sbjct: 131 YATLSGLLTKQPFAIGGSGSFYINGFVDAEYKKNMTKRE 169
>gi|296394010|ref|YP_003658894.1| 20S proteasome subunits AB [Segniliparus rotundus DSM 44985]
gi|296181157|gb|ADG98063.1| 20S proteasome A and B subunits [Segniliparus rotundus DSM 44985]
Length = 275
Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 74/181 (40%), Gaps = 28/181 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G V+IAGD + + G + +KV L AG AG+ A AF L+
Sbjct: 51 HATTIVALTYAGGVLIAGDRRATSGNLISHDEMQKV-YLTDEYSAAGIAGTVAIAFELVR 109
Query: 74 RLEKKLEQY----------PNQLLRSSVELAKDWRM--DKYLRNLEA--MILIAD----- 114
+LE Y + R LA R D ++ L A +++ D
Sbjct: 110 LFTVELEHYEKVEGVALTFSGKANR----LAAMVRGNLDAAMQGLAAVPLLIGLDPQDPE 165
Query: 115 -KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
K + G E +G IGSGG +A S + L A A +A++ A
Sbjct: 166 PKGRIVSYDAAGGRFEESSGYHCIGSGGLFARSTLKRLHDPDADRATALRSAVEALADAG 225
Query: 171 D 171
+
Sbjct: 226 E 226
>gi|14488813|pdb|1FNT|I Chain I, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488827|pdb|1FNT|W Chain W, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|178847467|pdb|2ZCY|H Chain H, Yeast 20s Proteasome:syringolin A-Complex
gi|178847481|pdb|2ZCY|V Chain V, Yeast 20s Proteasome:syringolin A-Complex
gi|178847509|pdb|3BDM|H Chain H, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847523|pdb|3BDM|V Chain V, Yeast 20s Proteasome:glidobactin A-Complex
Length = 232
Score = 55.1 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V+ + VVIA D + + G V N K+ R+ I AG++AD + + +
Sbjct: 1 TTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISP-KIWCAGAGTAADTEAVTQLI 59
Query: 76 EKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TGM 124
+E + R S++++ K + KY ++ A +++A + I G
Sbjct: 60 GSNIELHSLYTSREPRVVSALQMLKQ-HLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGS 118
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
DV +++GSG A++ + + EE A+ +A+D
Sbjct: 119 TDV----GYYLSLGSGSLAAMAVLESHWKQDLTKEE----AIKLASD 157
>gi|320583811|gb|EFW98024.1| proteasome component Pup1, putative [Pichia angusta DL-1]
Length = 267
Score = 55.1 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 17/166 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + + VVIA D + + G V N K+ RL I AG++AD + +
Sbjct: 29 GTTIVGCKFNDGVVIAADTRATAGPIVADKNCEKLHRLAP-RIWCAGAGTAADTEMVTQL 87
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKT----ITLVITGMG 125
++ LE + L R S++++ K + KY ++ A +++A I G
Sbjct: 88 VQSNLELHSMSLNREPRVSSALQMLKQ-HLFKYQGHIGAYLIVAGVDPKGAHLFSIHAHG 146
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
+ S GS +L+A A++ + +AM + AD
Sbjct: 147 ST-----DIGFYQSLGSGSLAA-MAVLERDWKEDLTKEEAMKLCAD 186
>gi|217034382|ref|ZP_03439797.1| hypothetical protein HP9810_889g27 [Helicobacter pylori 98-10]
gi|216943177|gb|EEC22647.1| hypothetical protein HP9810_889g27 [Helicobacter pylori 98-10]
Length = 62
Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 13 MHATTILTVRK--DGV--VVIAGDGQVSLGQTVMKANARKVRRL 52
ATTIL R G +I GDGQV+LG V+KANA K ++L
Sbjct: 2 FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKNQKL 45
>gi|239932274|ref|ZP_04689227.1| 20S proteasome beta-subunit [Streptomyces ghanaensis ATCC 14672]
Length = 258
Score = 54.7 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 70/179 (39%), Gaps = 27/179 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ V G VV+AGD + ++G + + + KV IAG AG + + L
Sbjct: 29 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 88
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--ILIA----------DK 115
E E K+E L + L+ R + + AM + + D+
Sbjct: 89 FQLELEHFE-KVEGAQLSLEGKANRLSTMIRSNLGM----AMQGLAVVPLFAGYDVDRDQ 143
Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E G A GSG +A A + L S A + +A+ AAD
Sbjct: 144 GRIFSYDVTGGRSE-EQGYAATGSGSIFARGAMKKLFRDDLSEAEATTLVVQALYDAAD 201
>gi|229367654|gb|ACQ58807.1| Proteasome subunit beta type-9 precursor [Anoplopoma fimbria]
Length = 216
Score = 54.7 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 17/157 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + +G VV+ D +VS G +V+ K+ L I +GS+ADA T+ E
Sbjct: 17 GTTIIAIEFNGGVVLGSDSRVSAGASVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEI 75
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA-----DKTITL-VITG 123
+ +L+ + ++ +RS+ L ++ KY L A +++A D ++G
Sbjct: 76 VNYQLDVHSVEIDEDPQVRSAASLVRN-ISYKYKEELSAHLIVAGWDRRDGGQVFATLSG 134
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
L GSG SY A S EE
Sbjct: 135 ----LLTRQPFAVGGSGSSYVYGFVDAEYRRDMSKEE 167
>gi|57642142|ref|YP_184620.1| proteasome, beta subunit 2 [Thermococcus kodakarensis KOD1]
gi|74505318|sp|Q5JHL8|PSB2_PYRKO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|57160466|dbj|BAD86396.1| proteasome, beta subunit 2 [Thermococcus kodakarensis KOD1]
Length = 199
Score = 54.3 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 67/181 (37%), Gaps = 26/181 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + +R VV+A D Q SL V N RK+ + I AGS D L
Sbjct: 6 GTTTVGIRTKEGVVLAADTQASLDHMVETLNIRKILPI-TDRIAITTAGSVGDVQALARM 64
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK--TITLVITGMGDVLEPE- 131
LE + Y R K + +L + IL +K + I G V EP
Sbjct: 65 LEAEARYYQFTWGRPM--------TAKAMAHLLSNILNENKWFPYMVQIIIGGYVEEPTL 116
Query: 132 -----------NGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
+ A GSG +A++ S A+E+A +A+ A VYT
Sbjct: 117 ANLDPLGGLIFDDYTATGSGSPFAIAVLEDGFRKDMSLEEAKELAVRAVRTAGKRDVYTG 176
Query: 178 H 178
Sbjct: 177 D 177
>gi|251772159|gb|EES52729.1| putative 20S proteasome beta-subunit [Leptospirillum
ferrodiazotrophum]
Length = 265
Score = 54.3 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 36/178 (20%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
HATT+L +R +G VV+AGD Q S G V KV + + + IAG AG + + L
Sbjct: 44 HATTVLALRYEGGVVMAGDRQASEGYQVASRAISKVLPVDRSSCVAIAGAAGPALEMARL 103
Query: 72 L-------ERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI-----A 113
E+LE + P Q++R ++ +A ++ ++++
Sbjct: 104 FRVEIEHYEKLEGVMLSTPGKANKLAQMVREALPMA-----------MQGLVVVPLFAAY 152
Query: 114 DKTI----TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
D G E E A GSGG +A +A + L S +E A+
Sbjct: 153 DPESRRGRIYKYDPAGGRYE-EESYHANGSGGLFARNALKMLYREGLSRDEAVEAALR 209
>gi|240171537|ref|ZP_04750196.1| proteasome (beta subunit) PrcB [Mycobacterium kansasii ATCC 12478]
Length = 288
Score = 54.3 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ ++ G VVIAGD + + G + + +KV + G AG++A A
Sbjct: 53 HGTTIVALKYPGGVVIAGDRRSTQGNMIAGRDVKKV-YITDDYTATGIAGTAAVAVEFAR 111
Query: 74 RLEKKLEQYP----------NQLLRSSV----ELAKDWRMDKYLRNLEAMIL-------I 112
+LE Y ++ R ++ LA ++ L A+ L
Sbjct: 112 LYAVELEHYEKLEGVPLTFAGKVNRLAIMVRGNLAA------AMQGLIALPLLAGYDIHA 165
Query: 113 ADKTITLVI----TGMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKA 165
AD I G +E E G ++GSG +A S+ + L S +SA +A +A
Sbjct: 166 ADPQTAGRIVSFDAAGGWNIE-EEGYQSVGSGSLFAKSSMKKLYSQVTDGDSALRVAVEA 224
Query: 166 MSIAAD 171
+ AAD
Sbjct: 225 LYDAAD 230
>gi|297198505|ref|ZP_06915902.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces sviceus ATCC 29083]
gi|197716162|gb|EDY60196.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces sviceus ATCC 29083]
Length = 281
Score = 54.3 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 43/176 (24%), Positives = 71/176 (40%), Gaps = 21/176 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ V G VV+AGD + ++G + + + KV IAG AG + + L
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKT--IT 118
E E K+E L + L+ R + + ++ + ++ D+
Sbjct: 112 FQLELEHFE-KVEGAQLSLEGKANRLSTMIRSNLGMA-MQGLAVVPLFAGYDVDRERGRI 169
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E+ A GSG +A A + L + A + +A+ AAD
Sbjct: 170 FSYDVTGGRSE-EHNFAATGSGSVFARGAMKKLYRGDLTEEQATTLVVQALYDAAD 224
>gi|84496445|ref|ZP_00995299.1| putative 20S proteasome beta-subunit [Janibacter sp. HTCC2649]
gi|84383213|gb|EAP99094.1| putative 20S proteasome beta-subunit [Janibacter sp. HTCC2649]
Length = 280
Score = 54.3 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+T+ +G V++AGD + ++G + + KV + +++ G AG++ A L+
Sbjct: 50 HGTTIVTLSYEGGVLMAGDRRATMGNIIANRDMEKVFATDEFSVV-GIAGTAGLAIELVR 108
Query: 74 RLEKKLEQYP---NQLLR---SSVELAKDWRMD--KYLRNLEAMILIADKTI------TL 119
+ +LE Y L+ + LA R + ++ L + + A
Sbjct: 109 LFQVELEHYEKIEGTLMSLEGKANRLASMIRGNLGMAMQGLSVVPVFAGFDHHGQCGRIF 168
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
G E E+ ++GSG +A A + L S++E IA +A+ AAD
Sbjct: 169 SYDVTGGCYE-EHDHHSVGSGSLFARGALKKLYRPGMSSDEAVRIAVEALWDAAD 222
>gi|294659430|ref|XP_461801.2| DEHA2G05852p [Debaryomyces hansenii CBS767]
gi|199433955|emb|CAG90262.2| DEHA2G05852p [Debaryomyces hansenii]
Length = 271
Score = 53.9 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 17/166 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + G VVIA D + + G V N K+ RL I AG++AD + +
Sbjct: 29 GTTIVGCKFKGGVVIAADTRATAGSIVADKNCEKLHRLAP-RIWCAGAGTAADTEMVTQL 87
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKT----ITLVITGMG 125
+ LE + R +++ L K + KY +L A +++A L + G
Sbjct: 88 IASNLELHSLSQNRKPRVITALTLLKQ-HLFKYQGHLGAYLIVAGVDPTGAHLLSVQAHG 146
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
+ S GS +L+A A++ T + +AM + AD
Sbjct: 147 ST-----DIGQYQSLGSGSLAA-MAVLETHWRPDMSREEAMKLVAD 186
>gi|162606488|ref|XP_001713274.1| 26S proteasome, beta-1 SU [Guillardia theta]
gi|12580740|emb|CAC27058.1| 26S proteasome, beta-1 SU [Guillardia theta]
Length = 198
Score = 53.9 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI++++ ++I D +V++G + N+ KV +L K I+ +G SAD L ++
Sbjct: 8 GTTIISLKYINGIIIGSDSKVNIGSFISNRNSDKVFQLSK-FIVCCRSGKSADNQNLCDK 66
Query: 75 LEKKLEQ----YPNQ-LLRSSVELAKDWRMDKYLRNLEAMILIA-----DKTITLVITGM 124
L+ + + Y L+R V+ K Y NLE ++ A + +IT
Sbjct: 67 LKNYVIEKEFIYGRHVLVREVVQFIK---TLMYNCNLECTMICAGWDCTNGFQNYLITNG 123
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G +++ ++ G G +Y + S EE + K++SIA
Sbjct: 124 GGLIQ--KSIIVNGGGSNYISGLIDNNFNETMSLEECEKLITKSLSIA 169
>gi|295395909|ref|ZP_06806094.1| proteasome, beta subunit [Brevibacterium mcbrellneri ATCC 49030]
gi|294971182|gb|EFG47072.1| proteasome, beta subunit [Brevibacterium mcbrellneri ATCC 49030]
Length = 265
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 25/177 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + + V++AGD + ++G + +KV ++I G AG++ A L+
Sbjct: 46 GTTIVAFKTERGVLMAGDRRATMGNLIASHTIQKVHAADSASVI-GIAGTAGLALELIRL 104
Query: 75 LEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILI-----------ADKTI 117
+ +LE Y P L + LA R + L L+ + ++ +
Sbjct: 105 FQLELEHYEKIEGTPLSLEGKANRLASMLRGNLGLA-LQGLAVVPLFAGTVPGTTSGALY 163
Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI---AAD 171
+ +TG E +IGSG +A A + L Q +E R A+ AAD
Sbjct: 164 SFDVTGGKYQ---ELDFHSIGSGAGFARGALKKLWKPQLDDDEAVRVAVQTLYDAAD 217
>gi|156836420|ref|XP_001642274.1| hypothetical protein Kpol_218p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112761|gb|EDO14416.1| hypothetical protein Kpol_218p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 261
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 21/168 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG VVIA D + + G V N K+ R+ I AG++AD + +
Sbjct: 29 GTTIVGVKFDGGVVIAADTRSTQGPIVADKNCAKLHRIAP-RIWCAGAGTAADTEAVTQL 87
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKT----ITLVI--TG 123
+ +E + R S++++ K + KY ++ A +++A I G
Sbjct: 88 IGSNIELHSLYSNREPRVVSALQMLKQ-HLFKYQGHIGAYLIVAGVDPTGAHLFSIHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
DV ++GSG A++ + + EE A+ +A+D
Sbjct: 147 STDV----GYYHSLGSGSLAAMAVLESNWKQDLTKEE----AIKLASD 186
>gi|224473797|gb|ACN49141.1| proteasome beta 9 subunit [Oryzias dancena]
gi|224473814|gb|ACN49155.1| proteasome beta 9 subunit [Oryzias dancena]
Length = 216
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VV+ D +VS G +V+ K+ L I +GS+ADA T+ E
Sbjct: 17 GTTIIAIEFDGGVVLGSDSRVSAGASVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEM 75
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +L+ + ++ +RS+ L K+ KY L A +++A D+ +
Sbjct: 76 VNYQLDVHSIEIDEDPQVRSAATLVKN-ISYKYKEELSAHLIVAGWDRREGGQVFATLSG 134
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
L GSG SY A + EE
Sbjct: 135 LLTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEE 167
>gi|329939090|ref|ZP_08288464.1| 20S proteasome subunit beta precursor [Streptomyces
griseoaurantiacus M045]
gi|329301975|gb|EGG45868.1| 20S proteasome subunit beta precursor [Streptomyces
griseoaurantiacus M045]
Length = 281
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 69/179 (38%), Gaps = 27/179 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ V G VV+AGD + ++G + + + KV IAG AG + + L
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--ILIA----------DK 115
E E K+E L + L+ R + + AM + + D+
Sbjct: 112 FQLELEHFE-KVEGAQLSLEGKANRLSTMIRSNLGM----AMQGLAVVPLFAGYDVDRDR 166
Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E A GSG +A A + L + A + +A+ AAD
Sbjct: 167 GRIFSYDVTGGRSE-ETNYAATGSGSVFARGAMKKLFREDLTEEQATTLVVQALYDAAD 224
>gi|254172949|ref|ZP_04879623.1| proteasome subunit beta [Thermococcus sp. AM4]
gi|214033105|gb|EEB73933.1| proteasome subunit beta [Thermococcus sp. AM4]
Length = 200
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 68/179 (37%), Gaps = 26/179 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + ++ VV+A D Q SLG V N RK+ + I AGS D L
Sbjct: 7 GTTTVGIKVKDGVVLAADTQASLGNMVETLNIRKILPI-TDRIAITTAGSVGDVQALARM 65
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK--TITLVITGMGDVLEPE- 131
LE + Y R + + NL + IL +K + I G V +PE
Sbjct: 66 LEAQARYYQFTWGRPM--------TTRAMANLLSNILNENKWFPYMVQILIGGYVDKPEL 117
Query: 132 -----------NGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
A GSG +A++ S A+E+A +A+ A VYT
Sbjct: 118 ASVDALGGLVFEKYTATGSGSPFAIAIIEDGYREDMSIEEAKELAVRAVRTAGKRDVYT 176
>gi|240104109|ref|YP_002960418.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595730|sp|C5A2D5|PSB2_THEGJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|239911663|gb|ACS34554.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 200
Score = 53.5 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 68/179 (37%), Gaps = 26/179 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + ++ VV+A D Q SLG V N RK+ + I AGS D L
Sbjct: 7 GTTTVGIKVKEGVVLAADTQASLGNMVETLNIRKILPI-TDRIAITTAGSVGDVQALARM 65
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK--TITLVITGMGDVLEPE- 131
LE + Y R + + NL + IL +K + I G V +PE
Sbjct: 66 LEAQARYYQFTWGRPM--------TTRAMANLLSNILNENKWFPYMVQIIIGGYVDKPEL 117
Query: 132 -----------NGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
A GSG +A++ S A+E+A +A+ A VYT
Sbjct: 118 ASVDALGGLVFEKYTATGSGSPFAIAIIEDGYREDMSIEEAKELAVRAVKTAGKRDVYT 176
>gi|118466114|ref|YP_881603.1| PcrB protein [Mycobacterium avium 104]
gi|302595761|sp|A0QFB5|PSB_MYCA1 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|118167401|gb|ABK68298.1| PcrB protein [Mycobacterium avium 104]
Length = 303
Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 40/188 (21%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ ++ G VV+AGD + + G + + +KV + G AG++A A
Sbjct: 66 HGTTIVALKYPGGVVLAGDRRSTQGNMIAGRDVKKV-YITDDYTATGIAGTAAIAVEFAR 124
Query: 74 RLEKKLEQYP----------NQLLRSSV----ELAKDWRMDKYLRNLEAMILIA----DK 115
+LE Y ++ R ++ LA ++ L A+ L+A D
Sbjct: 125 LYAVELEHYEKLEGVPLTFAGKVNRLAIMVRGNLAA------AMQGLVALPLLAGYDIDA 178
Query: 116 TITLVITGMGDVLE---------PENGVMAIGSGGSYALSAARALMST---QNSAEEIAR 163
G G ++ E G ++GSG +A S+ + L S +SA +A
Sbjct: 179 RDP---EGAGRIVSFDAAGGWNLEEEGYQSVGSGSIFAKSSMKKLYSQVVDADSAVRVAI 235
Query: 164 KAMSIAAD 171
+A+ AAD
Sbjct: 236 EALYDAAD 243
>gi|41407933|ref|NP_960769.1| PrcB [Mycobacterium avium subsp. paratuberculosis K-10]
gi|254775073|ref|ZP_05216589.1| PrcB [Mycobacterium avium subsp. avium ATCC 25291]
gi|81571311|sp|Q73YW8|PSB_MYCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|41396287|gb|AAS04152.1| PrcB [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 303
Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 46/191 (24%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ ++ G VV+AGD + + G + + +KV + G AG++A A
Sbjct: 66 HGTTIVALKYPGGVVLAGDRRSTQGNMIAGRDVKKV-YITDDYTATGIAGTAAIAVEFAR 124
Query: 74 RLEKKLEQYP----------NQLLRSSV----ELAKDWRMDKYLRNLEAMILIA------ 113
+LE Y ++ R ++ LA ++ L A+ L+A
Sbjct: 125 LYAVELEHYEKLEGVPLTFAGKVNRLAIMVRGNLAA------AMQGLVALPLLAGYDIDA 178
Query: 114 -DKTITLVITGMGDVLE---------PENGVMAIGSGGSYALSAARALMST---QNSAEE 160
D G G ++ E G ++GSG +A S+ + L S +SA
Sbjct: 179 PDPE------GAGRIVSFDAAGGWNLEEEGYQSVGSGSIFAKSSMKKLYSQVVDADSAVR 232
Query: 161 IARKAMSIAAD 171
+A +A+ AAD
Sbjct: 233 VAIEALYDAAD 243
>gi|66359272|ref|XP_626814.1| PUP1/proteasome subunit beta type 7, NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
gi|46228168|gb|EAK89067.1| PUP1/proteasome subunit beta type 7, NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
Length = 279
Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 16/184 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V + VV+ D + + G V + K+ RL AG AG++AD +
Sbjct: 41 GTTIVGVACNDCVVLGADTRATNGPIVADKDCEKIHRLSDNIFAAG-AGTAADLDHVTSL 99
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILIADKTIT----LVITGMG 125
+E LE Q+ R +V + D + KY + A +++A T ++ G
Sbjct: 100 IEGNLELQKLQMNRKPRVAHAVSMLSD-HLYKYQGYIGAHLIVAGSDSTGNFVFQVSANG 158
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVL 182
+++ ++GSG A S A + E + +I A I +Y+ N+ +
Sbjct: 159 CIMQ--LPFTSMGSGSLCARSILEARYRDGLTESECVELVSDAIRAGIYNDLYSGSNVNI 216
Query: 183 ETLK 186
+K
Sbjct: 217 LIIK 220
>gi|15609247|ref|NP_216626.1| proteasome (beta subunit) PrcB [Mycobacterium tuberculosis H37Rv]
gi|15841602|ref|NP_336639.1| proteasome, beta subunit [Mycobacterium tuberculosis CDC1551]
gi|31793290|ref|NP_855783.1| proteasome (beta subunit) PrcB [Mycobacterium bovis AF2122/97]
gi|121637992|ref|YP_978216.1| proteasome subunit beta PrcB [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148661925|ref|YP_001283448.1| proteasome subunit beta [Mycobacterium tuberculosis H37Ra]
gi|148823321|ref|YP_001288075.1| proteasome beta subunit prcB [Mycobacterium tuberculosis F11]
gi|167967479|ref|ZP_02549756.1| proteasome beta subunit prcB [Mycobacterium tuberculosis H37Ra]
gi|215403493|ref|ZP_03415674.1| proteasome beta subunit prcB [Mycobacterium tuberculosis 02_1987]
gi|215411813|ref|ZP_03420605.1| proteasome beta subunit prcB [Mycobacterium tuberculosis 94_M4241A]
gi|215427486|ref|ZP_03425405.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T92]
gi|215431034|ref|ZP_03428953.1| proteasome beta subunit prcB [Mycobacterium tuberculosis EAS054]
gi|215446334|ref|ZP_03433086.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T85]
gi|218753831|ref|ZP_03532627.1| proteasome beta subunit prcB [Mycobacterium tuberculosis GM 1503]
gi|219558083|ref|ZP_03537159.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T17]
gi|224990486|ref|YP_002645173.1| proteasome subunit beta [Mycobacterium bovis BCG str. Tokyo 172]
gi|253798828|ref|YP_003031829.1| proteasome beta subunit prcB [Mycobacterium tuberculosis KZN 1435]
gi|254232270|ref|ZP_04925597.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis C]
gi|254364917|ref|ZP_04980963.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis str.
Haarlem]
gi|254551142|ref|ZP_05141589.1| proteasome beta subunit prcB [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260187098|ref|ZP_05764572.1| proteasome beta subunit prcB [Mycobacterium tuberculosis CPHL_A]
gi|260201219|ref|ZP_05768710.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T46]
gi|260205398|ref|ZP_05772889.1| proteasome beta subunit prcB [Mycobacterium tuberculosis K85]
gi|289443613|ref|ZP_06433357.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T46]
gi|289447730|ref|ZP_06437474.1| proteasome beta subunit prcB [Mycobacterium tuberculosis CPHL_A]
gi|289554104|ref|ZP_06443314.1| proteasome beta subunit prcB [Mycobacterium tuberculosis KZN 605]
gi|289570223|ref|ZP_06450450.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T17]
gi|289574789|ref|ZP_06455016.1| proteasome beta subunit prcB [Mycobacterium tuberculosis K85]
gi|289745383|ref|ZP_06504761.1| proteasome subunit beta PrcB [Mycobacterium tuberculosis 02_1987]
gi|289750704|ref|ZP_06510082.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T92]
gi|289754218|ref|ZP_06513596.1| proteasome subunit beta PrcB [Mycobacterium tuberculosis EAS054]
gi|289758228|ref|ZP_06517606.1| proteasome subunit beta PrcB [Mycobacterium tuberculosis T85]
gi|289762272|ref|ZP_06521650.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis GM 1503]
gi|294993518|ref|ZP_06799209.1| proteasome subunit beta [Mycobacterium tuberculosis 210]
gi|297634694|ref|ZP_06952474.1| proteasome subunit beta [Mycobacterium tuberculosis KZN 4207]
gi|297731682|ref|ZP_06960800.1| proteasome subunit beta [Mycobacterium tuberculosis KZN R506]
gi|298525606|ref|ZP_07013015.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis
94_M4241A]
gi|306776357|ref|ZP_07414694.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu001]
gi|306784880|ref|ZP_07423202.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu003]
gi|306789247|ref|ZP_07427569.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu004]
gi|306793576|ref|ZP_07431878.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu005]
gi|306797965|ref|ZP_07436267.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu006]
gi|306803844|ref|ZP_07440512.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu008]
gi|306808417|ref|ZP_07445085.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu007]
gi|306968240|ref|ZP_07480901.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu009]
gi|306972467|ref|ZP_07485128.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu010]
gi|307080178|ref|ZP_07489348.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu011]
gi|307084758|ref|ZP_07493871.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu012]
gi|313659017|ref|ZP_07815897.1| proteasome subunit beta [Mycobacterium tuberculosis KZN V2475]
gi|81422055|sp|Q7TZ13|PSB_MYCBO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|81669082|sp|O33245|PSB_MYCTU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|302595763|sp|A1KKF3|PSB_MYCBP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|302595764|sp|C1AQ26|PSB_MYCBT RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|302595771|sp|A5U4D6|PSB_MYCTA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|302595772|sp|A5WP84|PSB_MYCTF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|302595773|sp|C6DPV1|PSB_MYCTK RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|167013196|pdb|2JAY|A Chain A, Proteasome Beta Subunit Prcb From Mycobacterium
Tuberculosis
gi|2253050|emb|CAB10714.1| proteasome (beta subunit) PrcB [Mycobacterium tuberculosis H37Rv]
gi|13881852|gb|AAK46453.1| proteasome, beta subunit [Mycobacterium tuberculosis CDC1551]
gi|31618882|emb|CAD96987.1| proteasome (beta subunit) PrcB [Mycobacterium bovis AF2122/97]
gi|121493640|emb|CAL72115.1| proteasome (beta subunit) PrcB [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124601329|gb|EAY60339.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis C]
gi|134150431|gb|EBA42476.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis str.
Haarlem]
gi|148506077|gb|ABQ73886.1| proteasome subunit beta [Mycobacterium tuberculosis H37Ra]
gi|148721848|gb|ABR06473.1| proteasome beta subunit prcB [Mycobacterium tuberculosis F11]
gi|148832234|gb|ABR14062.1| PrcB [Mycobacterium tuberculosis H37Ra]
gi|224773599|dbj|BAH26405.1| proteasome subunit beta [Mycobacterium bovis BCG str. Tokyo 172]
gi|253320331|gb|ACT24934.1| proteasome beta subunit prcB [Mycobacterium tuberculosis KZN 1435]
gi|289416532|gb|EFD13772.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T46]
gi|289420688|gb|EFD17889.1| proteasome beta subunit prcB [Mycobacterium tuberculosis CPHL_A]
gi|289438736|gb|EFD21229.1| proteasome beta subunit prcB [Mycobacterium tuberculosis KZN 605]
gi|289539220|gb|EFD43798.1| proteasome beta subunit prcB [Mycobacterium tuberculosis K85]
gi|289543977|gb|EFD47625.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T17]
gi|289685911|gb|EFD53399.1| proteasome subunit beta PrcB [Mycobacterium tuberculosis 02_1987]
gi|289691291|gb|EFD58720.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T92]
gi|289694805|gb|EFD62234.1| proteasome subunit beta PrcB [Mycobacterium tuberculosis EAS054]
gi|289709778|gb|EFD73794.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis GM 1503]
gi|289713792|gb|EFD77804.1| proteasome subunit beta PrcB [Mycobacterium tuberculosis T85]
gi|298495400|gb|EFI30694.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis
94_M4241A]
gi|308215203|gb|EFO74602.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu001]
gi|308330397|gb|EFP19248.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu003]
gi|308334232|gb|EFP23083.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu004]
gi|308338032|gb|EFP26883.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu005]
gi|308341718|gb|EFP30569.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu006]
gi|308345208|gb|EFP34059.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu007]
gi|308349511|gb|EFP38362.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu008]
gi|308354141|gb|EFP42992.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu009]
gi|308358079|gb|EFP46930.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu010]
gi|308362013|gb|EFP50864.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu011]
gi|308365661|gb|EFP54512.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu012]
gi|323719323|gb|EGB28464.1| proteasome beta subunit prcB [Mycobacterium tuberculosis CDC1551A]
gi|326903725|gb|EGE50658.1| proteasome beta subunit prcB [Mycobacterium tuberculosis W-148]
gi|328458589|gb|AEB04012.1| proteasome beta subunit prcB [Mycobacterium tuberculosis KZN 4207]
Length = 291
Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG--KGNIIAGFAGSSADAFTL 71
H TTI+ ++ G VV+AGD + + G + + R VR++ G AG++A A
Sbjct: 56 HGTTIVALKYPGGVVMAGDRRSTQGNMI---SGRDVRKVYITDDYTATGIAGTAAVAVEF 112
Query: 72 LERLEKKLEQY 82
+LE Y
Sbjct: 113 ARLYAVELEHY 123
>gi|67616602|ref|XP_667496.1| proteasome component precursor [Cryptosporidium hominis TU502]
gi|54658633|gb|EAL37261.1| proteasome component precursor [Cryptosporidium hominis]
Length = 279
Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 16/184 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V + VV+ D + + G V + K+ RL AG AG++AD +
Sbjct: 41 GTTIVGVACNDCVVLGADTRATNGPIVADKDCEKIHRLSDNIFAAG-AGTAADLDHVTSL 99
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILIADKTIT----LVITGMG 125
+E LE Q+ R +V + D + KY + A +++A T ++ G
Sbjct: 100 IEGNLELQKLQMNRKPRVAHAVSMLSD-HLYKYQGYVGAHLIVAGSDSTGNFVFQVSANG 158
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVL 182
+++ ++GSG A S A + E + +I A I +Y+ N+ +
Sbjct: 159 CIMQ--LPFTSMGSGSLCARSILEARYRDGLTESECVELVSDAIRAGIYNDLYSGSNVNI 216
Query: 183 ETLK 186
+K
Sbjct: 217 LIIK 220
>gi|254581944|ref|XP_002496957.1| ZYRO0D12034p [Zygosaccharomyces rouxii]
gi|238939849|emb|CAR28024.1| ZYRO0D12034p [Zygosaccharomyces rouxii]
Length = 261
Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 21/168 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ D VVIA D + + G V N K+ R+ I AG++AD + +
Sbjct: 29 GTTIVGVKYDKGVVIAADTRSTQGPIVADKNCAKLHRMAP-RIWCAGAGTAADTEAVTQL 87
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKT----ITLVIT--G 123
+ LE + R S++++ K + +Y ++ A +++A + G
Sbjct: 88 IGSNLELHSQYANREPRVVSALQMLKQ-HLFRYQGHIGAYLIVAGVDPTGAHLFSVQAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
DV +++GSG A++ + + +E A+ +A+D
Sbjct: 147 STDV----GHYLSLGSGSLAAMATLESNWKQNLTKDE----AVKLASD 186
>gi|291443528|ref|ZP_06582918.1| 20S proteasome beta-subunit [Streptomyces roseosporus NRRL 15998]
gi|291346475|gb|EFE73379.1| 20S proteasome beta-subunit [Streptomyces roseosporus NRRL 15998]
Length = 281
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 69/179 (38%), Gaps = 27/179 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ G VV+AGD + ++G + + + KV IAG AG + + L
Sbjct: 52 HGTTIVAASFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--ILIA----------DK 115
E E K+E L + L+ R + + AM + + DK
Sbjct: 112 FQLELEHFE-KVEGAQLSLEGKANRLSTMIRSNLAM----AMQGLAVVPLFAGYDIDRDK 166
Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E G A GSG +A + + L + A + +A+ AAD
Sbjct: 167 GRIFSYDVTGGRSE-ETGYAATGSGSIFARGSMKKLYREDLTQEQALTLVVQALYDAAD 224
>gi|182439652|ref|YP_001827371.1| putative 20S proteasome beta-subunit [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326780317|ref|ZP_08239582.1| proteasome, beta subunit [Streptomyces cf. griseus XylebKG-1]
gi|302595787|sp|B1W306|PSB_STRGG RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|178468168|dbj|BAG22688.1| putative 20S proteasome beta-subunit [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326660650|gb|EGE45496.1| proteasome, beta subunit [Streptomyces cf. griseus XylebKG-1]
Length = 281
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 21/176 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI++ G VV+AGD + ++G + + +KV IAG AG + + L
Sbjct: 52 HGTTIVSASFPGGVVLAGDRRATMGNMIASRDMQKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTI--T 118
E E K+E L + L+ R + + ++ + ++ D+
Sbjct: 112 FQLELEHFE-KVEGAQLSLEGKANRLSTMIRSNLAMA-MQGLAVVPLFAGYDVDREKGRI 169
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
G E E+G A GSG +A +A + L + E+ + +A+ AAD
Sbjct: 170 FSYDVTGGRTE-ESGYAATGSGSIFARNAMKKLYREDLTEEQALTLVVQALYDAAD 224
>gi|145594775|ref|YP_001159072.1| 20S proteasome, A and B subunits [Salinispora tropica CNB-440]
gi|145304112|gb|ABP54694.1| 20S proteasome, A and B subunits [Salinispora tropica CNB-440]
Length = 324
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G VV+AGD + ++G + + + KV + G AG++ L
Sbjct: 97 HATTIVAIATAGGVVLAGDRRATMGNLIAQRDVEKVHP-ADAYSLVGMAGAAGIGIELTR 155
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 156 LFQVELEHY 164
>gi|118617841|ref|YP_906173.1| proteasome (beta subunit) PrcB [Mycobacterium ulcerans Agy99]
gi|183983084|ref|YP_001851375.1| proteasome (beta subunit) PrcB [Mycobacterium marinum M]
gi|302595767|sp|B2HFV6|PSB_MYCMM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|302595774|sp|A0PQT3|PSB_MYCUA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|118569951|gb|ABL04702.1| proteasome (beta subunit) PrcB [Mycobacterium ulcerans Agy99]
gi|183176410|gb|ACC41520.1| proteasome (beta subunit) PrcB [Mycobacterium marinum M]
Length = 289
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 38/187 (20%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ ++ G V+IAGD + + G + + RKV + G AG++A A
Sbjct: 54 HATTIVALKYPGGVLIAGDRRSTQGNMIAGRDVRKV-YITDDYTATGIAGTAAIAVEFAR 112
Query: 74 RLEKKLEQYP----------NQLLRSSV----ELAKDWRMDKYLRNLEAMILIADKT--- 116
+LE Y ++ R ++ LA ++ L A+ L+A
Sbjct: 113 LYAVELEHYEKLEGVPLTFAGKVNRLAIMVRGNLAA------AMQGLVALPLLASYDIHA 166
Query: 117 ---------ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARK 164
++ G + +E E G A+GSG +A S+ + L + +SA +A +
Sbjct: 167 SDPRSAGRIVSFDAAGGWN-IE-EEGYQAVGSGSIFAKSSIKKLYAQVTDADSALRVAVE 224
Query: 165 AMSIAAD 171
A+ AAD
Sbjct: 225 ALYDAAD 231
>gi|296165182|ref|ZP_06847729.1| proteasome [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899371|gb|EFG78830.1| proteasome [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 297
Score = 52.8 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 46/191 (24%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ ++ G VVIAGD + + G + + +KV + G AG++A A
Sbjct: 62 HGTTIVALKYPGGVVIAGDRRSTQGNMIAGRDVKKV-YVTDDYTATGIAGTAAIAVEFAR 120
Query: 74 RLEKKLEQYP----------NQLLRSSV----ELAKDWRMDKYLRNLEAMILIA------ 113
+LE Y ++ R ++ LA ++ L A+ L+A
Sbjct: 121 LYAVELEHYEKLEGVPLTFAGKVNRLAIMVRGNLAA------AMQGLVALPLLAGYDIGA 174
Query: 114 -DKTITLVITGMGDVLE---------PENGVMAIGSGGSYALSAARALMS---TQNSAEE 160
D G G ++ E G ++GSG +A S+ + L S +SA
Sbjct: 175 PDPE------GAGRIVSFDAAGGWNLEEEGYQSVGSGSIFAKSSMKKLYSRVVDADSAVR 228
Query: 161 IARKAMSIAAD 171
+A +A+ AAD
Sbjct: 229 VAVEALYDAAD 239
>gi|238064537|ref|ZP_04609246.1| 20S proteasome A and B [Micromonospora sp. ATCC 39149]
gi|237886348|gb|EEP75176.1| 20S proteasome A and B [Micromonospora sp. ATCC 39149]
Length = 279
Score = 52.8 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 23/179 (12%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G VV+AGD + ++G + + + KV + G AG++ L+
Sbjct: 52 HATTIVAISAAGGVVMAGDRRATMGNLIAQRDIEKVHP-ADAYSLVGIAGTAGIGIELMR 110
Query: 74 RLEKKLEQYPN------QLLRSSVELAKDWRMD--KYLRNLEAM-------ILIADKT-- 116
+ +LE Y L + LA R + ++ L + + AD+
Sbjct: 111 LFQVELEHYEKIEGAMLSLDGKANRLASMIRGNLGAAMQGLAVIPLFAGFDLAAADQARA 170
Query: 117 -ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAAD 171
G E E G AIGSG +A SA + S ++ R +A+ AAD
Sbjct: 171 GRIFSFDVTGGPYE-ETGYDAIGSGSIFARSALKKRFRAGLSIDDAVRLAVEALYDAAD 228
>gi|220912674|ref|YP_002487983.1| 20S proteasome A and subunit betas [Arthrobacter chlorophenolicus
A6]
gi|302595819|sp|B8H8L6|PSB_ARTCA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|219859552|gb|ACL39894.1| 20S proteasome A and B subunits [Arthrobacter chlorophenolicus A6]
Length = 273
Score = 52.8 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 25/178 (14%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + +G V++AGD + ++G + + KV + +++ G AG++ A L
Sbjct: 49 HATTIVAMSYNGGVLMAGDRRATMGNVIASRHIEKVFPADRYSVL-GIAGTAGIAIDLTR 107
Query: 74 RLEKKLEQY---PNQLLRSSVELAKDWRMDKYLR-----NLEAMILI---------ADKT 116
+ +LE Y LL S+E K R+ +R ++ + ++ A
Sbjct: 108 LFQVELEHYEKIEGTLL--SLE-GKANRLGAMIRGNLPLAMQGLAVVPLFAGFDTSAGVG 164
Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
G E E+ +GSG +A A + L SAEE +A +A+ AAD
Sbjct: 165 RLFSYDVTGGRYE-EHEHHTVGSGSVFARGALKKLWRPNLSAEEAVAVAIEALFDAAD 221
>gi|29833223|ref|NP_827857.1| 20S proteasome beta-subunit [Streptomyces avermitilis MA-4680]
gi|81716602|sp|Q828I8|PSB2_STRAW RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PrcB 2; Flags: Precursor
gi|29610345|dbj|BAC74392.1| putative 20S proteasome beta-subunit [Streptomyces avermitilis
MA-4680]
Length = 281
Score = 52.8 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 21/176 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ G VV+AGD + ++G + + + KV G AG++ A +++
Sbjct: 52 HGTTIVATTFPGGVVLAGDRRATMGNVIAQRDIEKVFP-ADEYSAVGIAGTAGLAVEMVK 110
Query: 74 RLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLRNLEAM----ILI--------ADKTI--T 118
+ +LE + ++ +++ L K R+ +R+ AM + + D+
Sbjct: 111 LFQLELEHFE-KVEGATLSLEGKANRLSTMIRSNLAMAMQGLAVVPLFAGYDVDREKGRI 169
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E+G + GSG +A A + L + A + +A+ AAD
Sbjct: 170 FSYDVTGGRSE-EHGYASTGSGSIFARGAMKKLYRDDLTEQQATTLVIQALYDAAD 224
>gi|319794383|ref|YP_004156023.1| 20S proteasome a and b subunits [Variovorax paradoxus EPS]
gi|315596846|gb|ADU37912.1| 20S proteasome A and B subunits [Variovorax paradoxus EPS]
Length = 197
Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG---FAGSSADAFTLL 72
TT++ VRK G V +A D V+ G T + A K +++ AG FA + A A L+
Sbjct: 2 TTVVAVRKGGQVTMAADSLVTFGDTRLSHRAEKNQKIFTVEDAAGTSLFAMAGAAAHFLV 61
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL--------------------EAMILI 112
+ ++ L S E+ +R L + + +L+
Sbjct: 62 LQHALAAQEREKLLFGSKHEI---FRTFTMLHPVLKDSFFMQTKEDDHEPYESSQFTMLM 118
Query: 113 ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAA 170
A+++ I +V E + AIGSG S+AL A A SA ++A IAA
Sbjct: 119 ANQSGIYGIYSYREVFEFKE-FWAIGSGRSFALGAMHAAYDIKSRSARDVAEAG--IAA 174
>gi|291450471|ref|ZP_06589861.1| 20S proteasome beta-subunit [Streptomyces albus J1074]
gi|291353420|gb|EFE80322.1| 20S proteasome beta-subunit [Streptomyces albus J1074]
Length = 281
Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ G VV+AGD + ++G + + + KV + G AG++ A +++
Sbjct: 52 HGTTIVASTFPGGVVLAGDRRATMGNVIAQRDIEKVFP-ADEHSAVGIAGTAGLAVEMVK 110
Query: 74 RLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLRN-----LEAMILI-------ADKT--IT 118
+ +LE + ++ +++ L K R+ +R+ ++ + ++ D+
Sbjct: 111 LFQLELEHFE-KVEGAALSLEGKANRLSTMIRSNLGMAMQGLAVVPLFVGYDVDRERGRI 169
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E+G A GSG ++A + + L + A + +A+ AAD
Sbjct: 170 FSYDVTGGRSE-EHGYAATGSGSTFARGSMKKLYRDDLTEEQATTLVVQALYDAAD 224
>gi|194223397|ref|XP_001493056.2| PREDICTED: similar to proteasome subunit beta type 9-like protein
[Equus caballus]
Length = 219
Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G+ V+ K+ L I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHH-RIYCALSGSAADAQAVADM 78
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+LE + +L ++ + ++ KY +L A +++A D+ + G
Sbjct: 79 AAYQLELHGMELEEPPLVLAAANVVRN-ITYKYREDLSAHLMVAGWDQREGGQVYGTLGG 137
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ GSG +Y A S EE
Sbjct: 138 MLTRQPFAIGGSGSTYIYGYVDAAYKQGMSPEE 170
>gi|86741318|ref|YP_481718.1| proteasome subunit beta [Frankia sp. CcI3]
gi|86568180|gb|ABD11989.1| proteasome endopeptidase complex, beta component. Threonine
peptidase. MEROPS family T01B [Frankia sp. CcI3]
Length = 304
Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + + G + + + KV G+AG++ L+
Sbjct: 81 HGTTIVAVAFPGGVIMAGDRRATQGHMIAQRDVEKVHH-ADDYSCVGYAGTAGVGAELIR 139
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 140 LFQVELEHY 148
>gi|320011740|gb|ADW06590.1| 20S proteasome A and B subunits [Streptomyces flavogriseus ATCC
33331]
Length = 281
Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 21/176 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ G VV+AGD + ++G + + + KV G AG++ A +++
Sbjct: 52 HGTTIVAASFPGGVVLAGDRRATMGNMIAQRDIEKVFP-ADEYSAVGIAGTAGLAVEMVK 110
Query: 74 RLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLRNLEAM----ILI--------ADKTI--T 118
+ +LE + ++ +++ L K R+ +R+ AM + + D+
Sbjct: 111 LFQLELEHFE-KVEGATLSLEGKANRLSTMIRSNLAMAMQGLAVVPLFAGFDVDREKGRI 169
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
G E E+G A GSG +A + + L + E+ + +A+ AAD
Sbjct: 170 FSYDVTGGRSE-EHGYAATGSGSVFARGSMKKLYRADLTEEQTLTLVVQALYDAAD 224
>gi|315506171|ref|YP_004085058.1| 20S proteasome a and b subunits [Micromonospora sp. L5]
gi|315412790|gb|ADU10907.1| 20S proteasome A and B subunits [Micromonospora sp. L5]
Length = 279
Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G VV+AGD + ++G + + + KV + G AG++ L+
Sbjct: 52 HATTIVAISAAGGVVMAGDRRATMGNLIAQRDIEKVHP-ADAYSLVGIAGTAGIGIELMR 110
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 111 LFQVELEHY 119
>gi|256391621|ref|YP_003113185.1| 20S proteasome A and subunit betas [Catenulispora acidiphila DSM
44928]
gi|302595822|sp|C7PVV2|PSB_CATAD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|256357847|gb|ACU71344.1| 20S proteasome A and B subunits [Catenulispora acidiphila DSM
44928]
Length = 288
Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 22/171 (12%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+++ G V++AGD + ++G + + + KV G AGS+ A ++
Sbjct: 59 HGTTIVSIAFPGGVLLAGDRRATMGNFIAQRDIEKVFP-ADEFSAVGIAGSAGLAVEVVR 117
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDK---YLRNLEAM----ILIA------DKTI--- 117
+ +LE Y V L+ D + ++ +R AM + + D+
Sbjct: 118 LFQLELEHYE---KIEGVTLSTDGKANRLATMIRGNLAMAMQGLAVVPLFAGYDEETGQG 174
Query: 118 -TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
G + E E+ ++GSG +A A + L +AE+ A A+
Sbjct: 175 RIFSYDVTGGMYE-EHDFYSVGSGSMFARGALKKLFRPDFTAEDAAVAAVQ 224
>gi|297195371|ref|ZP_06912769.1| 20S proteasome beta-subunit [Streptomyces pristinaespiralis ATCC
25486]
gi|197719259|gb|EDY63167.1| 20S proteasome beta-subunit [Streptomyces pristinaespiralis ATCC
25486]
Length = 281
Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 27/179 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ G VV+AGD + ++G + + + KV IAG AG + + L
Sbjct: 52 HGTTIVATTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--ILIA--------DKTI 117
E E K+E L + L+ R + + AM + + D+
Sbjct: 112 FQLELEHFE-KVEGAQLSLEGKANRLSTMIRSNLGM----AMQGLAVVPLFAGYDIDREK 166
Query: 118 --TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E+G A GSG +A A + L + A + +A+ AAD
Sbjct: 167 GRIFSYDVTGGRSE-EHGFAATGSGSIFARGAMKKLYREDLTEQQATTLVIQALYDAAD 224
>gi|325003202|ref|ZP_08124314.1| 20S proteasome beta-type subunit [Pseudonocardia sp. P1]
Length = 263
Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 30/166 (18%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V++AGD + + G + + + KV + AGFAGS A +L+
Sbjct: 38 HGTTIIAFTWADGVLLAGDRRATSGNVIAQKDLVKVMAI-DDTSAAGFAGSVGHALLMLK 96
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE---------AM-------ILI----- 112
++EQY VE + D +R L AM + +
Sbjct: 97 MFAAEVEQYEK------VEGSPI-SQDGKIRRLSTVVRENLGAAMQGFVALPLFVGYDPA 149
Query: 113 -ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS 157
AD + G + +G +IGSG +A ++ + L
Sbjct: 150 DADPARIVTFDPSGSIARNRSGYTSIGSGSYFAEASLKKLHRPDTD 195
>gi|239940100|ref|ZP_04692037.1| putative 20S proteasome beta-subunit [Streptomyces roseosporus NRRL
15998]
gi|239986588|ref|ZP_04707252.1| putative 20S proteasome beta-subunit [Streptomyces roseosporus NRRL
11379]
Length = 258
Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 69/179 (38%), Gaps = 27/179 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ G VV+AGD + ++G + + + KV IAG AG + + L
Sbjct: 29 HGTTIVAASFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 88
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--ILIA----------DK 115
E E K+E L + L+ R + + AM + + DK
Sbjct: 89 FQLELEHFE-KVEGAQLSLEGKANRLSTMIRSNLAM----AMQGLAVVPLFAGYDIDRDK 143
Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E G A GSG +A + + L + A + +A+ AAD
Sbjct: 144 GRIFSYDVTGGRSE-ETGYAATGSGSIFARGSMKKLYREDLTQEQALTLVVQALYDAAD 201
>gi|18124169|gb|AAL59852.1|AF357920_1 proteasome beta-subunit [Ginglymostoma cirratum]
Length = 217
Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 21/159 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D +VS G+ + K+ L I +GS+ADA + +
Sbjct: 18 GTTIIAVEFDGGVVIGSDSRVSAGEAICNRVMNKLSPL-HDRIYCALSGSAADAQAIADS 76
Query: 75 LEKKLEQYP---NQ--LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+ +LE + L++++ + K+ KY L A +++A D+ G V
Sbjct: 77 VNYQLELHSIETGDAPLVQAAASVVKN-ISYKYKEELTAHLIVAGWDRKK------KGQV 129
Query: 128 LEPENGVMA------IGSGGSYALSAARALMSTQNSAEE 160
G++ GSG Y A + S +E
Sbjct: 130 YATLGGMIIRQPFSVGGSGSFYIYGYVDATYKEEMSKDE 168
>gi|302867419|ref|YP_003836056.1| 20S proteasome subunit A/B [Micromonospora aurantiaca ATCC 27029]
gi|302570278|gb|ADL46480.1| 20S proteasome A and B subunits [Micromonospora aurantiaca ATCC
27029]
Length = 266
Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G VV+AGD + ++G + + + KV + G AG++ L+
Sbjct: 39 HATTIVAISAAGGVVMAGDRRATMGNLIAQRDIEKVHP-ADAYSLVGIAGTAGIGIELMR 97
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 98 LFQVELEHY 106
>gi|330468523|ref|YP_004406266.1| 20S proteasome a and b subunits [Verrucosispora maris AB-18-032]
gi|328811494|gb|AEB45666.1| 20S proteasome a and b subunits [Verrucosispora maris AB-18-032]
Length = 266
Score = 52.0 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G VV+AGD + ++G + + + KV + G AG++ L+
Sbjct: 39 HATTIVAISAAGGVVMAGDRRATMGNLIAQRDIEKVHP-ADAYSLVGIAGTAGIGIELMR 97
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 98 LFQVELEHY 106
>gi|18859277|ref|NP_571753.1| proteasome beta 9b subunit [Danio rerio]
gi|5833463|gb|AAD53520.1|AF155580_1 proteasome subunit beta 9B [Danio rerio]
Length = 227
Score = 52.0 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G +V+ K+ L I +GS+ADA T+ E
Sbjct: 17 GTTIIAVEFDGGVVVGSDSRVSAGASVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEI 75
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA 113
+ +L+ + + L+ S+ L K+ KY L A +++A
Sbjct: 76 VNYQLDVHSIEVDEDPLVCSAATLVKN-ISYKYKEELSAHLIVA 118
>gi|195149838|ref|XP_002015862.1| GL11283 [Drosophila persimilis]
gi|194109709|gb|EDW31752.1| GL11283 [Drosophila persimilis]
Length = 305
Score = 52.0 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 61/163 (37%), Gaps = 27/163 (16%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L R G VV+ D + + GQ + +K+ L ++ AG +AD
Sbjct: 70 HGTTTLGFRYQGGVVLCADSRATSGQYIGSQTMKKIVEL-NDYMLGTLAGGAADCVYWDR 128
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
L + + EL ++ R L M L+ D +I +
Sbjct: 129 VLARDSRLH---------EL-------RFKRRLSGMGLVMGMMLAGYDDEGPKLIYVDSE 172
Query: 127 VLEPENGVMAIGSGGSYALS---AARALMSTQNSAEEIARKAM 166
+ V A+GSG YAL T A ++AR+A+
Sbjct: 173 GMRCHGNVFAVGSGSPYALGVLDTGHRFTMTDQEAFDLARRAI 215
>gi|145544955|ref|XP_001458162.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425981|emb|CAK90765.1| unnamed protein product [Paramecium tetraurelia]
Length = 275
Score = 52.0 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M G K TTI+ V DG VV+A D + + G V N K+ L AG
Sbjct: 25 MKAQGFKEMPFTKTGTTIVGVLFDGGVVMAADTRATAGSIVADKNCEKLHTLAPNIWAAG 84
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLR 88
AG++AD KL+ L R
Sbjct: 85 -AGTAADLHHQCAHFNAKLKLQRLNLNR 111
>gi|302595912|sp|Q2J9Q3|PSB_FRASC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
Length = 274
Score = 52.0 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + + G + + + KV G+AG++ L+
Sbjct: 51 HGTTIVAVAFPGGVIMAGDRRATQGHMIAQRDVEKVHH-ADDYSCVGYAGTAGVGAELIR 109
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 110 LFQVELEHY 118
>gi|325676828|ref|ZP_08156501.1| proteasome, beta subunit [Rhodococcus equi ATCC 33707]
gi|325552376|gb|EGD22065.1| proteasome, beta subunit [Rhodococcus equi ATCC 33707]
Length = 284
Score = 52.0 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G VVIAGD + ++G + + KV + AG AG++ A L+
Sbjct: 54 HGTTIVALTFAGGVVIAGDRRATMGNLIASRDVEKV-FVTDDYSAAGIAGTAGVAIELVR 112
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 113 LFAVELEHY 121
>gi|312139722|ref|YP_004007058.1| 20S proteasome beta subunit prcb [Rhodococcus equi 103S]
gi|311889061|emb|CBH48374.1| putative 20S proteasome beta subunit PrcB [Rhodococcus equi 103S]
Length = 284
Score = 52.0 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G VVIAGD + ++G + + KV + AG AG++ A L+
Sbjct: 54 HGTTIVALTFAGGVVIAGDRRATMGNLIASRDVEKV-FVTDDYSAAGIAGTAGVAIELVR 112
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 113 LFAVELEHY 121
>gi|124088284|ref|XP_001347037.1| Proteosome subunit [Paramecium tetraurelia strain d4-2]
gi|145474495|ref|XP_001423270.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057426|emb|CAH03410.1| Proteosome subunit, putative [Paramecium tetraurelia]
gi|124390330|emb|CAK55872.1| unnamed protein product [Paramecium tetraurelia]
Length = 275
Score = 52.0 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M G K TTI+ V DG VV+A D + + G V N K+ L AG
Sbjct: 25 MKAQGFKEMPFTKTGTTIVGVLFDGGVVMAADTRATAGSIVADKNCEKLHTLAPNIWAAG 84
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLR 88
AG++AD KL+ L R
Sbjct: 85 -AGTAADLHHQCAHFNAKLKLQRLNLNR 111
>gi|239978575|ref|ZP_04701099.1| 20S proteasome beta-subunit [Streptomyces albus J1074]
Length = 258
Score = 52.0 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ G VV+AGD + ++G + + + KV + G AG++ A +++
Sbjct: 29 HGTTIVASTFPGGVVLAGDRRATMGNVIAQRDIEKVFP-ADEHSAVGIAGTAGLAVEMVK 87
Query: 74 RLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLRN-----LEAMILI-------ADKT--IT 118
+ +LE + ++ +++ L K R+ +R+ ++ + ++ D+
Sbjct: 88 LFQLELEHFE-KVEGAALSLEGKANRLSTMIRSNLGMAMQGLAVVPLFVGYDVDRERGRI 146
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E+G A GSG ++A + + L + A + +A+ AAD
Sbjct: 147 FSYDVTGGRSE-EHGYAATGSGSTFARGSMKKLYRDDLTEEQATTLVVQALYDAAD 201
>gi|229365758|gb|ACQ57859.1| Proteasome subunit beta type-9 precursor [Anoplopoma fimbria]
Length = 159
Score = 52.0 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ +R +G VV+ D +VS G +V+ K+ L I +GS+ADA T+ E
Sbjct: 17 GTTIIAIRFNGGVVLGSDSRVSAGASVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEV 75
Query: 75 LEKKLEQYP 83
+ +L+ +
Sbjct: 76 VNYQLDVHS 84
>gi|229493495|ref|ZP_04387280.1| proteasome, beta subunit [Rhodococcus erythropolis SK121]
gi|229319456|gb|EEN85292.1| proteasome, beta subunit [Rhodococcus erythropolis SK121]
Length = 277
Score = 52.0 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G V++AGD + ++G + + +KV + AG AG++ A L+
Sbjct: 43 HGTTIVAISYAGGVLLAGDRRATMGNLIASRDVQKV-YVTDDYSAAGIAGTAGIAIELVR 101
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 102 LFAVELEHY 110
>gi|126309799|ref|XP_001377269.1| PREDICTED: similar to LMP2 [Monodelphis domestica]
Length = 306
Score = 52.0 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G V+ K+ L I +GS+ADA + +
Sbjct: 107 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFNKLAPL-NQQIYCALSGSAADAQAIADM 165
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTITL--VITGMGDV 127
+LE + +L S+ + ++ KY L A +++A L + G +
Sbjct: 166 ATYQLELHGMELEEPPLVLSAANVVRN-ISYKYREELSAHLMVAGWDRYLGGQVYGTLEG 224
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ GSG +Y A S EE
Sbjct: 225 MLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEE 257
>gi|333028209|ref|ZP_08456273.1| putative 20S proteasome beta-subunit [Streptomyces sp. Tu6071]
gi|332748061|gb|EGJ78502.1| putative 20S proteasome beta-subunit [Streptomyces sp. Tu6071]
Length = 280
Score = 52.0 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 25/178 (14%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTIL + DG V++AGD + ++G + + + KV IAG AG + + L
Sbjct: 51 HGTTILALAFDGGVILAGDRRATMGNVIAQRDVEKVFPADEYSAVGIAGTAGLAVEMVKL 110
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--ILIADKTITLVIT-GM 124
E E K+E L + LA R + + AM + + + G
Sbjct: 111 FQLELEHFE-KVEGTTLSLEGKANRLATMIRGNLGM----AMQGLAVVPLFAGYDVDRGT 165
Query: 125 GDVL--------EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
G + E G + GSG +A A + L A++ +A +A+ AAD
Sbjct: 166 GRIFSYDVAGGRSEEYGYASTGSGSVFARGALKKLYRPGLDADQASILAIQALYDAAD 223
>gi|145507274|ref|XP_001439592.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406787|emb|CAK72195.1| unnamed protein product [Paramecium tetraurelia]
Length = 275
Score = 51.6 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M G K TTI+ V DG VV+A D + + G V N K+ L AG
Sbjct: 25 MKAQGFKEMPFTKTGTTIVGVIFDGGVVMAADTRATAGSIVADKNCEKLHPLAPNIWAAG 84
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
AG++AD KL+ L R S R+++ + L A +
Sbjct: 85 -AGTAADLHHQCAHFNAKLKLQRLNLNRQS-------RVNEVITKLTAKL 126
>gi|111222291|ref|YP_713085.1| 20S proteasome subunit beta [Frankia alni ACN14a]
gi|111149823|emb|CAJ61517.1| 20S proteasome beta-subunit [Frankia alni ACN14a]
Length = 259
Score = 51.6 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + + G + + + KV G+AG++ L+
Sbjct: 36 HGTTIVAVTFPGGVIMAGDRRATQGHMIAQRDVEKVHH-ADDFSCVGYAGTAGVGAELIR 94
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 95 LFQVELEHY 103
>gi|308321308|gb|ADO27806.1| proteasome subunit beta type-9-a like protein [Ictalurus furcatus]
Length = 214
Score = 51.6 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 28/174 (16%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSADAFTLL 72
TTI+ V+ +G V+I D + S+G + + +++ + +L + I AGS ADA +
Sbjct: 13 GTTIVAVKYNGGVIIGSDSRASIGGSYV--SSKVINKLIQVRDRIFCCIAGSLADAQHVT 70
Query: 73 ERLEKKLEQYPNQ-----LLRSSVELAKDW----RMDKYLRNLEAMILIA--DKT---IT 118
+ +L + Q L++++ + K+ R D L+A + A DK
Sbjct: 71 RVAKFQLSFHSIQMGSPPLVKAAATVLKELCYSNRED-----LQAGFITAGWDKKKGPQM 125
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
++ G ++ GSG +Y A S EE + A+++A
Sbjct: 126 YTVSMGGMLI--SQPFTIGGSGSTYIYGYMDAKYKPDMSREECIQFVKNALALA 177
>gi|302595911|sp|Q0RLT7|PSB_FRAAA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|6492303|gb|AAF14267.1|AF142435_3 20S proteasome beta-subunit precursor [Frankia sp. ACN14a/ts-r]
Length = 274
Score = 51.6 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + + G + + + KV G+AG++ L+
Sbjct: 51 HGTTIVAVTFPGGVIMAGDRRATQGHMIAQRDVEKVHH-ADDFSCVGYAGTAGVGAELIR 109
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 110 LFQVELEHY 118
>gi|50293069|ref|XP_448962.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528275|emb|CAG61932.1| unnamed protein product [Candida glabrata]
Length = 261
Score = 51.6 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ G VVIA D + + G V N K+ R+ I AG++AD + +
Sbjct: 29 GTTIVGVKFAGGVVIAADTRSTQGPIVADKNCAKLHRISP-RIWCAGAGTAADTEAVTQL 87
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKT----ITLVITGMG 125
+ +E + R S++++ K + KY ++ A +++A I G
Sbjct: 88 IGSNIELHSLYTNRSPRVVSALQMLKQ-HLFKYQGHIGAYLIVAGVDPTGAHLFSIHAHG 146
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
V S GS +L+A A++ + + +A+ +AAD
Sbjct: 147 ST-----DVGYYQSLGSGSLAA-MAVLESHWKPDMTKEEAIQLAAD 186
>gi|83816981|ref|NP_001033050.1| proteasome subunit beta type-9 [Sus scrofa]
gi|311260176|ref|XP_003128374.1| PREDICTED: proteasome subunit beta type-9-like [Sus scrofa]
gi|83320492|gb|ABC02872.1| proteasome beta 9 subunit [Sus scrofa]
gi|84514209|gb|ABC59113.1| proteasome beta 9 subunit [Sus scrofa]
gi|110276961|gb|ABG57117.1| proteasome beta 9 subunit [Sus scrofa]
gi|147225182|emb|CAN13314.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional protease 2) [Sus scrofa]
Length = 219
Score = 51.6 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G+ V+ K+ L I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHH-RIYCALSGSAADAQAIADM 78
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGM--G 125
+LE + +L ++ + ++ KY +L A +++A D+ + G G
Sbjct: 79 AAYQLELHGMELEEPPLVLAAANVVRN-ISYKYREDLSAHLMVAGWDQREGGQVYGTMGG 137
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
++ GSG +Y A S EE
Sbjct: 138 MLIR--QPFAIGGSGSTYIYGYVDAAYKPGMSPEE 170
>gi|259535829|sp|A0QZ47|PSB_MYCS2 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|2293463|gb|AAC45614.1| proteasome beta subunit [Mycobacterium smegmatis str. MC2 155]
Length = 303
Score = 51.6 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 38/187 (20%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ ++ G V+IAGD + + G + + +KV + G AG++A A
Sbjct: 61 HGTTIVALKYPGGVLIAGDRRSTQGNMIAGRDVQKV-YITDDYTATGIAGTAAIAVEFAR 119
Query: 74 RLEKKLEQY----------PNQLLRSSVELAKDWRMD--KYLRNLEAM-ILI---ADKTI 117
+LE Y ++ R ++ + R + L+ A+ +L+ D
Sbjct: 120 LYAVELEHYEKLEGVPLTFRGKVNRLAIMV----RGNLGAALQGFVALPLLVGYDLDDPH 175
Query: 118 TLVITGMGDV----------LEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARK 164
G G + +E E G ++GSG +A S+ + L S +SA ++A +
Sbjct: 176 P---EGAGRIVSFDAAGGWNIE-EEGYQSVGSGSIFAKSSMKKLYSQVSDADSALKVAVE 231
Query: 165 AMSIAAD 171
A+ AAD
Sbjct: 232 ALYDAAD 238
>gi|288917497|ref|ZP_06411862.1| 20S proteasome A and B subunits [Frankia sp. EUN1f]
gi|288351043|gb|EFC85255.1| 20S proteasome A and B subunits [Frankia sp. EUN1f]
Length = 273
Score = 51.6 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 66/190 (34%), Gaps = 49/190 (25%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + + G + + + KV G+AG++ L+
Sbjct: 50 HGTTIVAVTFPGGVIMAGDRRATQGHMIAQRDVEKVHH-ADEFSCVGYAGTAGVGAELIR 108
Query: 74 RLEKKLEQY---------------------PNQLLRSSVELAKDWRMDKYLRNLEAMILI 112
+ +LE Y L + LA + +
Sbjct: 109 LFQVELEHYEKIEGSTLSLDAKANRLAFMVKGNLPMAMQGLA-----------VIPLFAG 157
Query: 113 ADKTITLVITGMGDVLEPENGVM--------AIGSGGSYALSAARALMSTQNSAEEIAR- 163
D TG G + + +IGSG +A + + SA++ R
Sbjct: 158 FDTE-----TGQGRIFSYDVAAAKSEERTYESIGSGSVFARGSLKKRFRPDLSADDAVRI 212
Query: 164 --KAMSIAAD 171
+A+ AAD
Sbjct: 213 SVEALYDAAD 222
>gi|226306661|ref|YP_002766621.1| 20S proteasome beta-type subunit [Rhodococcus erythropolis PR4]
gi|75491637|sp|Q53083|PSB2_RHOER RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PrcB 2; Flags: Precursor
gi|302595780|sp|C0ZZU7|PSB_RHOE4 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|847774|gb|AAC45736.1| proteasome beta-type subunit 2 [Rhodococcus erythropolis]
gi|226185778|dbj|BAH33882.1| 20S proteasome beta-type subunit [Rhodococcus erythropolis PR4]
Length = 292
Score = 51.6 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G V++AGD + ++G + + +KV + AG AG++ A L+
Sbjct: 58 HGTTIVAISYAGGVLLAGDRRATMGNLIASRDVQKV-YVTDDYSAAGIAGTAGIAIELVR 116
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 117 LFAVELEHY 125
>gi|302595918|sp|A4X744|PSB2_SALTO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PrcB 2; Flags: Precursor
Length = 279
Score = 51.6 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G VV+AGD + ++G + + + KV + G AG++ L
Sbjct: 52 HATTIVAIATAGGVVLAGDRRATMGNLIAQRDVEKVHP-ADAYSLVGMAGAAGIGIELTR 110
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 111 LFQVELEHY 119
>gi|295839802|ref|ZP_06826735.1| proteasome, beta subunit [Streptomyces sp. SPB74]
gi|197697742|gb|EDY44675.1| proteasome, beta subunit [Streptomyces sp. SPB74]
Length = 280
Score = 51.6 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 25/178 (14%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTIL + DG V++AGD + ++G + + + KV IAG AG + + L
Sbjct: 51 HGTTILALAFDGGVILAGDRRATMGNVIAQRDVEKVFPADEYSAVGIAGTAGLAVEMVKL 110
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--ILIADKTITLVIT-GM 124
E E K+E L + LA R + + AM + + + G
Sbjct: 111 FQLELEHFE-KVEGATLSLEGKANRLATMIRGNLGM----AMQGLAVVPLFAGYDVDRGT 165
Query: 125 GDVL--------EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
G + E G + GSG +A A + L SA++ +A +A+ AAD
Sbjct: 166 GRIFSYDVAGGRSEEYGYASTGSGSVFARGALKKLYRPGLSADDASVLAIQALYDAAD 223
>gi|297290556|ref|XP_001108087.2| PREDICTED: proteasome subunit beta type-9-like isoform 1 [Macaca
mulatta]
gi|146157613|gb|ABQ08185.1| proteasome subunit beta type 9-like protein [Macaca fascicularis]
Length = 219
Score = 51.6 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G+ V+ K+ L + I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQ-RIYCALSGSAADAQAVADM 78
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+LE + +L ++ + ++ KY +L A +++A D+ + G
Sbjct: 79 AAYQLELHGIELEEPPLVLAAANVVRN-ITYKYREDLSAHLMVAGWDQHEGGQVYGTLGG 137
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ GSG +Y A S EE
Sbjct: 138 MLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEE 170
>gi|41614998|ref|NP_963496.1| hypothetical protein NEQ203 [Nanoarchaeum equitans Kin4-M]
gi|74579825|sp|Q74MP5|PSB_NANEQ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|40068722|gb|AAR39057.1| NEQ203 [Nanoarchaeum equitans Kin4-M]
Length = 196
Score = 51.6 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 23/191 (12%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ ++ VV+A D Q S+G V A+K+ + ++AG +G+ AD + + L
Sbjct: 2 TTIIGIKARDGVVLASDKQASMGNIVEDKRAQKIIPITDYILLAG-SGTVADLQHIAKIL 60
Query: 76 --EKKLEQ----YPNQLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTI--TLVITGMG 125
E KL + ++ ++ L+ +++ N +++ + + G+G
Sbjct: 61 KTELKLRELYSRRTMNVIEAANLLSHLLYQNRFYLNPLGLLIAGPINSKEFGIYSLDGIG 120
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS--IAAD------ICV 174
+ E ++ A GSGG AL A + A ++A KA+ IA D I +
Sbjct: 121 AISEIKD-YFAEGSGGVIALGTLEAEYNPDITVRDAIKLAEKALKSSIARDVFSGYGIEI 179
Query: 175 YTNHNIVLETL 185
YT +E L
Sbjct: 180 YTITKKGVEKL 190
>gi|206603968|gb|EDZ40448.1| Putative 20S proteasome beta-subunit [Leptospirillum sp. Group II
'5-way CG']
Length = 265
Score = 51.2 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 5 GDKHYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
G +H+ ATTIL G V++AGD + + G +M KV + G+ +
Sbjct: 27 GPRHFPEGWSETRATTILAFHFSGGVLVAGDRRATAGNRIMTNRVEKVLEI-DGSSLMAI 85
Query: 62 AGSSADAFTLLERLEKKLEQY-PNQLLRSSVE 92
AGS A A + LE + Y +QL SVE
Sbjct: 86 AGSPAFAIEMARILEHSFKYYRRSQLAELSVE 117
>gi|302564219|ref|NP_001181793.1| proteasome subunit beta type-9 [Macaca mulatta]
Length = 209
Score = 51.2 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G+ V+ K+ L + I +GS+ADA + +
Sbjct: 10 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQ-RIYCALSGSAADAQAVADM 68
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+LE + +L ++ + ++ KY +L A +++A D+ + G
Sbjct: 69 AAYQLELHGIELEEPPLVLAAANVVRN-ITYKYREDLSAHLMVAGWDQHEGGQVYGTLGG 127
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ GSG +Y A S EE
Sbjct: 128 MLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEE 160
>gi|124514849|gb|EAY56360.1| putative 20S proteasome beta-subunit [Leptospirillum rubarum]
Length = 265
Score = 51.2 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 2 VVMGDKHYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
V G +H ATTIL G V++AGD + + G +M KV + G+ +
Sbjct: 24 VAPGPRHSPEGWVETRATTILAFHFSGGVLVAGDRRATAGNRIMTNRVEKVLEI-DGSSL 82
Query: 59 AGFAGSSADAFTLLERLEKKLEQY-PNQLLRSSVE 92
AGS A A + LE + Y +QL SVE
Sbjct: 83 MAIAGSPAFAIEMARILEHSFKYYRRSQLAELSVE 117
>gi|209878736|ref|XP_002140809.1| proteasome subunit beta type 6 precursor [Cryptosporidium muris
RN66]
gi|209556415|gb|EEA06460.1| proteasome subunit beta type 6 precursor, putative [Cryptosporidium
muris RN66]
Length = 213
Score = 51.2 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 28/165 (16%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M TT++ ++ +++A D + S+G V+ +ARK+ R+ I +GS++D T++
Sbjct: 14 MTGTTLVALKCRDGLILAADSRTSMGNMVVSRSARKITRI-TDKIFICRSGSASDTQTIV 72
Query: 73 ERLEKKLEQYPNQL-----LRSSVELA-------KDWRMDKYLRNLEAMILIA-----DK 115
+ + K + +L ++S LA K++ L A +++A D
Sbjct: 73 QYVRKLTADHELELGEEARVKSVASLARIICYQNKEY--------LTAGLIVAGVDPYDG 124
Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
I G ++E GSG +Y S A T +E
Sbjct: 125 FKIFQIALGGSMIE--KSYALSGSGSAYIYSLLDATYHTNMDIDE 167
>gi|260903697|ref|ZP_05912019.1| putative 20S proteasome beta-subunit precursor [Brevibacterium
linens BL2]
Length = 266
Score = 51.2 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TTI+ R +++AGD + ++G + + KVR + G AG++ A L+
Sbjct: 42 EGTTIICFRTAAGILMAGDRRATIGSMIASHSMEKVRP-ADDFSVIGIAGTAGLALDLIR 100
Query: 74 RLEKKLEQYPNQLLRSSVELA-KDWRMDKYLR-----NLEAMILI-----ADKTI----T 118
+ +LE Y ++ + + LA K R+ LR ++ + ++ D+
Sbjct: 101 LYQLELEHYE-KIEGARLSLAGKANRLASMLRGNLSLAMQGLSVVPLFAGVDEATPAGQI 159
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E+ +IGSG YA A + L A +A +A+ A+D
Sbjct: 160 FSFDVTGGKYE-EHRFHSIGSGSGYARGALKKLWQPGLEFDAAISVAVEALFDASD 214
>gi|50550679|ref|XP_502812.1| YALI0D14058p [Yarrowia lipolytica]
gi|49648680|emb|CAG81000.1| YALI0D14058p [Yarrowia lipolytica]
Length = 261
Score = 51.2 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG VVIA D + + G V N K+ R+ AG AG++AD + +
Sbjct: 29 GTTIVGCKFDGGVVIAADTRATSGDIVADKNCEKLHRIAPHIWCAG-AGTAADTEMVTQL 87
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT----G 123
+E + + R + + + K + KY ++ A +++A D T +++ G
Sbjct: 88 TASNIELHSLSAGRQPRVVTCLTMLKQ-HLFKYQGHIGAYLIVAGVDPTGPQLMSIHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
DV +A+GSG A++ A + + EE A+ +A+D
Sbjct: 147 STDV----GYYLALGSGSMAAMAVLEANWKQELTKEE----AIQLASD 186
>gi|269126545|ref|YP_003299915.1| 20S proteasome subunits A and B [Thermomonospora curvata DSM 43183]
gi|302595699|sp|D1A2S9|PSB1_THECD RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PrcB 1; Flags: Precursor
gi|268311503|gb|ACY97877.1| 20S proteasome A and B subunits [Thermomonospora curvata DSM 43183]
Length = 284
Score = 51.2 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 17/174 (9%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
HATTI+ V G VV+AGD + + G + + + KV R IAG AG + L
Sbjct: 55 HATTIVAVTFPGGVVMAGDRRATAGNMIAQRDVEKVFRADEFSAVAIAGTAGIGMEIVRL 114
Query: 72 LERLEKKLEQYPN---QLLRSSVELAKDWRMD--KYLRNLEAMILIA--DKTI----TLV 120
+ + E+ L + LA R + ++ L A+ L A D
Sbjct: 115 FQVEIEHYEKMEGRTLSLEGKANRLATMIRANLGMAMQGLVAVPLFAGYDTEREVGRIFS 174
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAAD 171
G E E+ +IGSG +A A + L SA++ A +A+ AAD
Sbjct: 175 YDPAGGRYE-EHEHHSIGSGSVFARGALKKLWRPDLSAQDAALVCVQALYDAAD 227
>gi|77735723|ref|NP_001029560.1| proteasome subunit beta type-9 precursor [Bos taurus]
gi|108860909|sp|Q3SZC2|PSB9_BOVIN RecName: Full=Proteasome subunit beta type-9; AltName:
Full=Proteasome subunit beta-1i; Flags: Precursor
gi|63169163|gb|AAY34699.1| proteosome subunit beta type 9 [Bos taurus]
gi|74267808|gb|AAI02964.1| Proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Bos taurus]
gi|296474568|gb|DAA16683.1| proteasome subunit beta type-9 precursor [Bos taurus]
Length = 219
Score = 51.2 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G+ V+ K+ L + +I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQ-HIYCALSGSAADAQAIADM 78
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+LE + +L ++ + ++ KY +L A +++A D+ + G
Sbjct: 79 AAYQLELHGMELEEPPLVLAAANVVRN-ITYKYREDLSAHLMVAGWDQREGGQVYGTMSG 137
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ GSG +Y A S EE
Sbjct: 138 MLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEE 170
>gi|256832436|ref|YP_003161163.1| 20S proteasome A and B subunits [Jonesia denitrificans DSM 20603]
gi|302595738|sp|C7R403|PSB_JONDD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|256685967|gb|ACV08860.1| 20S proteasome A and B subunits [Jonesia denitrificans DSM 20603]
Length = 302
Score = 51.2 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 72/182 (39%), Gaps = 44/182 (24%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + ++IAGD + ++G T+ KV + + IA AG++ A L+
Sbjct: 49 HGTTIVALEYHNGIIIAGDRRATMGTTIAHREIEKVFAADEHSAIA-IAGTAGLAIELVR 107
Query: 74 RLEKKLEQYP----------------NQLLRSSVELAKD----------WRMDKYLRNLE 107
+ +LE Y + +LRS + LA W ++ L
Sbjct: 108 LFQLELEHYEKIEGTPLSLDGKANRLSTMLRSHLHLALQGLPIVPIFAGWDSTRHQGRLF 167
Query: 108 AMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
A +TG G EP GSG +A SA + L Q A +A++
Sbjct: 168 A----------YDVTG-GRYEEP--NFTCAGSGSVFARSALKKLWKPQLDA----TRAIT 210
Query: 168 IA 169
IA
Sbjct: 211 IA 212
>gi|302518112|ref|ZP_07270454.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces sp. SPB78]
gi|318059100|ref|ZP_07977823.1| proteasome subunit beta [Streptomyces sp. SA3_actG]
gi|318077875|ref|ZP_07985207.1| proteasome subunit beta [Streptomyces sp. SA3_actF]
gi|302427007|gb|EFK98822.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces sp. SPB78]
Length = 280
Score = 51.2 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 25/178 (14%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTIL + DG V++AGD + ++G + + + KV IAG AG + + L
Sbjct: 51 HGTTILALAFDGGVILAGDRRATMGNVIAQRDVEKVFPADEYSAVGIAGTAGLAVEMVKL 110
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--ILIADKTITLVIT-GM 124
E E K+E L + LA R + + AM + + + G
Sbjct: 111 FQLELEHFE-KVEGATLSLEGKANRLATMIRGNLGM----AMQGLAVVPLFAGYDVDRGT 165
Query: 125 GDVL--------EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
G + E G + GSG +A A + L A++ +A +A+ AAD
Sbjct: 166 GRIFSYDVAGGRSEEYGYASTGSGSVFARGALKKLYRPGLDADQASILAIQALYDAAD 223
>gi|223937009|ref|ZP_03628917.1| 20S proteasome, A and B subunits [bacterium Ellin514]
gi|223894290|gb|EEF60743.1| 20S proteasome, A and B subunits [bacterium Ellin514]
Length = 203
Score = 51.2 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 67/169 (39%), Gaps = 32/169 (18%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVM----KANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TI+ V+K+G V IA D Q + G T + K K+ R I GF G A
Sbjct: 3 TIVVVKKNGEVAIAADTQTTSGGTKLSAGFKTQKEKILRFEDTYI--GFVGYCAH----R 56
Query: 73 ERLEKKLEQYPNQL----LRSSVEL---------------AKDWRMDKYLRNLEAMILIA 113
+ E +E+ P+ L R E +K+ D + I+IA
Sbjct: 57 DVFESLMEKRPSDLDFKSRRHIFETFLKLHPVLKEDFFVNSKE--EDSAYETSQMTIVIA 114
Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
+ + +V E E AIGSG YAL A T+ +A E+A
Sbjct: 115 NPHGIFDVNSDRNVTEIE-AFWAIGSGREYALGAMHQAYDTRATAREVA 162
>gi|284031156|ref|YP_003381087.1| 20S proteasome subunits A and B [Kribbella flavida DSM 17836]
gi|302595740|sp|D2Q4H4|PSB_KRIFD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|283810449|gb|ADB32288.1| 20S proteasome A and B subunits [Kribbella flavida DSM 17836]
Length = 279
Score = 51.2 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ DG VV+AGD + ++G + + + KV G AGS+ A ++
Sbjct: 50 HGTTIVAATFDGGVVMAGDRRATMGNIIAQRDIEKVFP-ADEYSCVGIAGSAGLAIEMVR 108
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 109 LFQVELEHY 117
>gi|291301921|ref|YP_003513199.1| 20S proteasome subunits A/B [Stackebrandtia nassauensis DSM 44728]
gi|302595786|sp|D3Q557|PSB_STANL RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|290571141|gb|ADD44106.1| 20S proteasome A and B subunits [Stackebrandtia nassauensis DSM
44728]
Length = 279
Score = 50.8 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 27/181 (14%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAGFAGSSADAFTL 71
H TTI+ +R + VV+AGD + + G + + R ++++ + + G AG++ +
Sbjct: 52 HGTTIVALRCNEGVVMAGDRRATQGNMI---SLRDIQKVFPADAYSLIGIAGTAGLGVEM 108
Query: 72 LERLEKKLEQY---PNQ---LLRSSVELAKDWRMDK--YLRNLEAMIL----------IA 113
+ + +LE + L + +LA R + ++ L + L A
Sbjct: 109 IRLFQAELEHFEKLEGNALSLHGKANKLANMIRGNLGIAMQGLAVLPLFAGFDTDAPDAA 168
Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAA 170
+G + E E AIGSG +A SA + ++ A E +A +A+ AA
Sbjct: 169 SAGRIFSYDVVGGIYE-EREYDAIGSGSIFAKSALKKRFQSEVDATEATRLAIEALYDAA 227
Query: 171 D 171
D
Sbjct: 228 D 228
>gi|332246133|ref|XP_003272204.1| PREDICTED: proteasome subunit beta type-9-like [Nomascus
leucogenys]
Length = 219
Score = 50.8 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G+ V+ K+ L + I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHQ-RIYCALSGSAADAQAVADM 78
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+LE + +L ++ + ++ KY +L A +++A D+ + G
Sbjct: 79 AAYQLELHGIELEEPPLVLAAANVVRN-ISYKYREDLSAHLMVAGWDQREGGQVYGTLGG 137
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ GSG +Y A S EE
Sbjct: 138 MLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEE 170
>gi|296269805|ref|YP_003652437.1| proteasome endopeptidase complex [Thermobispora bispora DSM 43833]
gi|296092592|gb|ADG88544.1| Proteasome endopeptidase complex [Thermobispora bispora DSM 43833]
Length = 278
Score = 50.8 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ V DG VV+AGD + + G + + + KV R G AG+++ +
Sbjct: 49 HATTIVAVICDGGVVMAGDRRATSGNYISQRDIEKVFR-ADDYSCLGIAGTASIGLEVAR 107
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 108 LFRVELEHY 116
>gi|20094664|ref|NP_614511.1| protease subunit of the proteasome [Methanopyrus kandleri AV19]
gi|74559570|sp|Q8TW10|PSB_METKA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19887825|gb|AAM02441.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
Length = 210
Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 72/190 (37%), Gaps = 17/190 (8%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TT + + D VV+A D + +G + +K+ R+ I AGS ADA +++
Sbjct: 9 KGTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRI-HDYIGVTTAGSVADAQKIVD 67
Query: 74 --RLEKKLEQYPNQLLRSSVELAKD-----WRMDKYLRNLEAMILIA----DKTITLVIT 122
R E +L + + + S+ LA K R +++ D +
Sbjct: 68 LMRAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFNDDDPALYNLD 127
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
G ++E A GSG A A A E+A +A+ A + T
Sbjct: 128 PSGSIIE--EDYTATGSGSPTAYGVLEAEYEEGMSLDDAIEVAVRAVKSALERDTGTGEG 185
Query: 180 IVLETLKVGD 189
+ + T+ +
Sbjct: 186 VTVVTITREE 195
>gi|15827687|ref|NP_301950.1| proteasome [beta]-type subunit 2 [Mycobacterium leprae TN]
gi|221230164|ref|YP_002503580.1| proteasome beta-type subunit 2 [Mycobacterium leprae Br4923]
gi|81346071|sp|Q49780|PSB_MYCLE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|302595766|sp|B8ZRF3|PSB_MYCLB RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|467003|gb|AAA17188.1| prcB [Mycobacterium leprae]
gi|4200274|emb|CAA22933.1| putative proteasome beta-type subunit 2 [Mycobacterium leprae]
gi|13093238|emb|CAC31703.1| proteasome [beta]-type subunit 2 [Mycobacterium leprae]
gi|219933271|emb|CAR71417.1| proteasome [beta]-type subunit 2 [Mycobacterium leprae Br4923]
Length = 291
Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ ++ G VVIAGD + + G + + RKV + G AG +A A
Sbjct: 55 HGTTIVVLKYPGGVVIAGDRRSTQGNMIAGRDVRKV-YITDDYTATGIAGIAAVAVEFAR 113
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 114 LYAVELEHY 122
>gi|116670723|ref|YP_831656.1| proteasome subunit beta [Arthrobacter sp. FB24]
gi|302595820|sp|A0JWY6|PSB_ARTS2 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|116610832|gb|ABK03556.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01B [Arthrobacter sp. FB24]
Length = 275
Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+++ G V++AGD + ++G + + KV +++ G AG++ A L
Sbjct: 51 HATTIVSLTYGGGVLMAGDRRATMGNVIASRHIEKVFPADSYSVL-GIAGTAGIAIDLTR 109
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 110 LFQVELEHY 118
>gi|312197566|ref|YP_004017627.1| 20S proteasome A and B subunits [Frankia sp. EuI1c]
gi|311228902|gb|ADP81757.1| 20S proteasome A and B subunits [Frankia sp. EuI1c]
Length = 274
Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + + G + + KV G+AG++ L++
Sbjct: 51 HGTTIVAVTFPGGVIMAGDRRATQGNLIATRDVDKVHH-ADEYSAVGYAGTAGVGADLIK 109
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 110 LFQVELEHY 118
>gi|158316642|ref|YP_001509150.1| 20S proteasome A and B subunits [Frankia sp. EAN1pec]
gi|302595824|sp|A8LH54|PSB_FRASN RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|158112047|gb|ABW14244.1| 20S proteasome A and B subunits [Frankia sp. EAN1pec]
Length = 274
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + + G + + + KV G+AG++ L+
Sbjct: 51 HGTTIVAVAFPGGVIMAGDRRATQGHMIAQRDVEKVHH-ADEFSCVGYAGTAGVGAELIR 109
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 110 LFQVELEHY 118
>gi|302533523|ref|ZP_07285865.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces sp. C]
gi|302442418|gb|EFL14234.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces sp. C]
Length = 279
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ G VV+AGD + ++G + + + KV G AG++ A +++
Sbjct: 50 HGTTIVAATFPGGVVLAGDRRATMGNMIAQRDIEKVFP-ADEYSAVGIAGTAGLAVEMVK 108
Query: 74 RLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLRNLEAM----ILIA----------DKTIT 118
+ +LE + ++ +++ L K R+ +R+ M + + +K
Sbjct: 109 LFQLELEHFE-KVEGATLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDEAKEKGRI 167
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E+G A GSG +A + + L S A + +A+ AAD
Sbjct: 168 FSYDVTGGRSE-EHGYAATGSGSIFARGSMKKLYRPDLSEEQATTLVVQALYDAAD 222
>gi|145505061|ref|XP_001438497.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405669|emb|CAK71100.1| unnamed protein product [Paramecium tetraurelia]
Length = 275
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M G K TTI+ V +G VV+A D + + G V N K+ L AG
Sbjct: 25 MKAQGFKEMPFTKTGTTIVGVIFEGGVVMAADTRATAGSIVADKNCEKLHPLAPNIWAAG 84
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLR 88
AG++AD KL+ L R
Sbjct: 85 -AGTAADLHHQCAHFNAKLKLQRLNLNR 111
>gi|297661241|ref|XP_002809172.1| PREDICTED: proteasome subunit beta type-9-like [Pongo abelii]
Length = 218
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G+ V+ K+ L + I +GS+ADA + +
Sbjct: 19 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHQ-RIYCALSGSAADAQAVADM 77
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+LE + +L ++ + ++ KY +L A +++A D+ + G
Sbjct: 78 AAYQLELHGIELEEPPLVLAAANVVRN-ISYKYREDLSAHLMVAGWDQREGGQVYGTLGG 136
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ GSG ++ A S EE
Sbjct: 137 MLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEE 169
>gi|18859269|ref|NP_571751.1| proteasome beta 11 subunit [Danio rerio]
gi|5833455|gb|AAD53516.1|AF155576_1 proteasome subunit beta 11 [Danio rerio]
gi|29561857|emb|CAD87790.1| proteasome (prosome, macropain) subunit, beta type, 11 [Danio
rerio]
gi|49903219|gb|AAH76475.1| Psmb11 protein [Danio rerio]
gi|94732366|emb|CAK04957.1| proteasome (prosome, macropain) subunit, beta type, 11 [Danio
rerio]
gi|182889396|gb|AAI65038.1| Psmb11 protein [Danio rerio]
Length = 217
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
TTIL V+ +G V+I D + S+G++ + +++ + +L I AGS ADA +
Sbjct: 16 GTTILAVKFNGGVIIGSDSRASMGESYV--SSKTINKLIQVHDRIFCCIAGSLADAQAVT 73
Query: 73 ERLEKKLEQYPNQ-----LLRSSVELAKDW-RMDKYLRNLEAMILIA--DKT---ITLVI 121
+ + +L + Q L++++ + ++ +K L A + A D+ V+
Sbjct: 74 KMAKFQLSFHSIQMESPPLVKAAASIMRELCYSNK--EELRAGFITAGWDRKKGPQIYVV 131
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ G +L GSG +Y A + EE
Sbjct: 132 SLGGMLL--SQPFTIGGSGSTYIYGYVDAKFKPDMTLEE 168
>gi|61367386|gb|AAX42990.1| proteasome subunit beta type 9 [synthetic construct]
Length = 220
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G+ V+ K+ L + I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHE-RIYCALSGSAADAHAVADM 78
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+LE + +L ++ + ++ KY +L A +++A D+ + G
Sbjct: 79 AAYQLELHGIELEEPPLVLAAANVVRN-ISYKYREDLSAHLMVAGWDQREGGQVYGTLGG 137
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ GSG ++ A S EE
Sbjct: 138 MLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEE 170
>gi|325963284|ref|YP_004241190.1| proteasome endopeptidase complex, beta component [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469371|gb|ADX73056.1| proteasome endopeptidase complex, beta component [Arthrobacter
phenanthrenivorans Sphe3]
Length = 272
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + +G V++AGD + ++G + + KV + +++ G AG++ A L
Sbjct: 48 HATTIVAMSYEGGVLMAGDRRATMGNVIASRHIEKVFPADRYSVL-GIAGTAGIAIDLTR 106
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 107 LFQVELEHY 115
>gi|296109858|ref|YP_003616807.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
infernus ME]
gi|295434672|gb|ADG13843.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
infernus ME]
Length = 205
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 14/173 (8%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
++M TT + + V++A D + SLG + NA+K+ ++ N+ AGS DA +
Sbjct: 1 MEMKGTTTIGLICKDAVILAADKRASLGNLIADKNAKKIYKI-DDNLALTIAGSVGDAQS 59
Query: 71 LLERL--EKKL-EQYPNQLLR--SSVE-LAKDWRMDKYLRNLEAMIL-IADKT--ITLVI 121
L+ L E KL +L+ + L+ +Y L MI+ D+ +
Sbjct: 60 LVRYLTAEAKLYRMRTGKLMSPLACTTLLSNILHSSRYFPFLVQMIVGGFDEKGFKLYSL 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
+G V E E A GSG A A ++ + KA+ A +
Sbjct: 120 DPLGGVNE-EKDFTATGSGSPIAYGVLEAGYKKDMDYKKGVSLVLKALQAAME 171
>gi|118468051|ref|YP_888185.1| proteasome subunit beta [Mycobacterium smegmatis str. MC2 155]
gi|118169338|gb|ABK70234.1| proteasome beta subunit [Mycobacterium smegmatis str. MC2 155]
Length = 280
Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 34/185 (18%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ ++ G V+IAGD + + G + + +KV + G AG++A A
Sbjct: 38 HGTTIVALKYPGGVLIAGDRRSTQGNMIAGRDVQKV-YITDDYTATGIAGTAAIAVEFAR 96
Query: 74 RLEKKLEQY----------PNQLLRSSVELAKDWRMD--KYLRNLEAM-ILI-------- 112
+LE Y ++ R ++ + R + L+ A+ +L+
Sbjct: 97 LYAVELEHYEKLEGVPLTFRGKVNRLAIMV----RGNLGAALQGFVALPLLVGYDLDDPH 152
Query: 113 ---ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAM 166
A + ++ G + +E E G ++GSG +A S+ + L S +SA ++A +A+
Sbjct: 153 PEGAGRIVSFDAAGGWN-IE-EEGYQSVGSGSIFAKSSMKKLYSQVSDADSALKVAVEAL 210
Query: 167 SIAAD 171
AAD
Sbjct: 211 YDAAD 215
>gi|149235099|ref|XP_001523428.1| proteasome component PUP1 precursor [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452837|gb|EDK47093.1| proteasome component PUP1 precursor [Lodderomyces elongisporus NRRL
YB-4239]
Length = 272
Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 18/170 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + VVIA D + + G V N K+ RL I AG++AD + +
Sbjct: 29 GTTIVGCQFKNGVVIAADTRATAGPIVADKNCEKLHRLAP-RIWCAGAGTAADTEMVTQL 87
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKT----ITLVIT--G 123
+ LE + R ++V + K + KY +L A +++A L + G
Sbjct: 88 IASNLELHALSQNRQPRVITAVTMLKQ-HLFKYQGHLGAYLIVAGVDPTGAHLLSVQAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI 172
DV ++GSG A++ + EE IA A +I A I
Sbjct: 147 STDV----GKYQSLGSGSLAAMAVLETKFKEDMTKEEAIALCAEAIEAGI 192
>gi|269126673|ref|YP_003300043.1| 20S proteasome subunits A and B [Thermomonospora curvata DSM 43183]
gi|302595729|sp|D1A3V2|PSB2_THECD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PrcB 2; Flags: Precursor
gi|268311631|gb|ACY98005.1| 20S proteasome A and B subunits [Thermomonospora curvata DSM 43183]
Length = 280
Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 24/175 (13%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ VR V++AGD + + G + + + KV R + + +A AG+ A ++
Sbjct: 51 HGTTIVAVRYPEGVMLAGDRRATSGNLIAQKDLEKVHRADEHSAVA-MAGTVGLALEMIR 109
Query: 74 RLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLR-NL-EAM--ILIADKTITLVIT-GMGDV 127
L+ +LE Y +L + + L K R+ +R NL AM + + + G+G +
Sbjct: 110 LLQVELEHYE-KLQSAKLSLPGKARRLGAVIRANLAHAMQGLAVVPVFAGYDLDAGVGRI 168
Query: 128 LE------PEN--GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICV 174
P+ A GSG +A A + L + E AA +CV
Sbjct: 169 YNYDITGMPQESRDFHAEGSGSPFARGALKKLYRPDLTEAE--------AAAVCV 215
>gi|114606765|ref|XP_001167429.1| PREDICTED: proteasome subunit beta type-9 isoform 3 [Pan
troglodytes]
gi|332823722|ref|XP_003311253.1| PREDICTED: proteasome subunit beta type-9 [Pan troglodytes]
Length = 218
Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G+ V+ K+ L + I +GS+ADA + +
Sbjct: 19 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHE-RIYCALSGSAADAQAVADM 77
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+LE + +L ++ + ++ KY +L A +++A D+ + G
Sbjct: 78 AAYQLELHGIELEEPPLVLAAANVVRN-ISYKYREDLSAHLMVAGWDQREGGQVYGTLGG 136
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ GSG ++ A S EE
Sbjct: 137 MLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEE 169
>gi|4506205|ref|NP_002791.1| proteasome subunit beta type-9 proprotein [Homo sapiens]
gi|417529|sp|P28065|PSB9_HUMAN RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; AltName: Full=Macropain chain
7; AltName: Full=Multicatalytic endopeptidase complex
chain 7; AltName: Full=Proteasome chain 7; AltName:
Full=Proteasome subunit beta-1i; AltName: Full=Really
interesting new gene 12 protein; Flags: Precursor
gi|34635|emb|CAA47024.1| LMP2 [Homo sapiens]
gi|34656|emb|CAA78700.1| MHC-encoded proteasome subunit gene [Homo sapiens]
gi|1054744|emb|CAA60784.1| LMP2 [Homo sapiens]
gi|41388830|gb|AAH65513.1| Proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|49456273|emb|CAG46457.1| PSMB9 [Homo sapiens]
gi|55961338|emb|CAI17715.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|55961480|emb|CAI18141.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|56207312|emb|CAI18627.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|119624059|gb|EAX03654.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2), isoform CRA_b [Homo
sapiens]
gi|168984796|emb|CAQ08450.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|168985578|emb|CAQ10289.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|261860734|dbj|BAI46889.1| proteasome (prosome, macropain) subunit, beta type, 9 [synthetic
construct]
Length = 219
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G+ V+ K+ L + I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHE-RIYCALSGSAADAQAVADM 78
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+LE + +L ++ + ++ KY +L A +++A D+ + G
Sbjct: 79 AAYQLELHGIELEEPPLVLAAANVVRN-ISYKYREDLSAHLMVAGWDQREGGQVYGTLGG 137
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ GSG ++ A S EE
Sbjct: 138 MLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEE 170
>gi|392959|gb|AAC50154.1| LMP-2 [Homo sapiens]
gi|896224|gb|AAC60646.1| proteasome LMP2.s [Homo sapiens]
Length = 209
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G+ V+ K+ L + I +GS+ADA + +
Sbjct: 10 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHE-RIYCALSGSAADAQAVADM 68
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+LE + +L ++ + ++ KY +L A +++A D+ + G
Sbjct: 69 AAYQLELHGIELEEPPLVLAAANVVRN-ISYKYREDLSAHLMVAGWDQREGGQVYGTLGG 127
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ GSG ++ A S EE
Sbjct: 128 MLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEE 160
>gi|119716870|ref|YP_923835.1| proteasome subunit beta [Nocardioides sp. JS614]
gi|302595778|sp|A1SK13|PSB_NOCSJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|119537531|gb|ABL82148.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01B [Nocardioides sp. JS614]
Length = 283
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 33/182 (18%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ G VV+AGD + ++G + + + KV G AGS+ A ++
Sbjct: 47 HGTTIVAATFPGGVVMAGDRRATMGNIIAQRDIEKVFP-ADEFSAVGIAGSAGLAVEMVR 105
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------------------LI 112
+ +LE Y ++ S++ + D L A+I L
Sbjct: 106 LFQTELEHYE-KIEGSTLSM------DGKANRLAALIRSNLGMAMQGLAVVPLFAGFDLA 158
Query: 113 ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIA 169
+++ G E E ++GSG +A + + L +AE+ + +A+ A
Sbjct: 159 SNQGRIFSYDVTGGRYE-ETAFHSVGSGSLFARGSLKKLYRDDLTAEQTVQAVVEALYDA 217
Query: 170 AD 171
AD
Sbjct: 218 AD 219
>gi|34497454|ref|NP_901669.1| hypothetical protein CV_1999 [Chromobacterium violaceum ATCC 12472]
gi|34103309|gb|AAQ59671.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 196
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 67/170 (39%), Gaps = 29/170 (17%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANA------RKVRRLGKGNIIAGFAGSSADAF 69
TTI+ VRK + IA D Q + G K A K+ R G+ +GS+A
Sbjct: 2 TTIVAVRKGDQIAIAADSQTTFGDDQ-KLLAPYDCFHNKIFR--HGDSYLAVSGSAAHDL 58
Query: 70 ----TLLERLEKKLEQYPN--QLLRSSVELAKDWRMDKYLRNL----------EAMILIA 113
L E +K L R KD YLR + M++IA
Sbjct: 59 VLQGALKELKKKDLSSRQGIFDTFRKLHPKLKD---AFYLRPEEDEEDPYESSQMMVVIA 115
Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
+ + M ++ E + + AIGSG +A+ A A+ SA EIA
Sbjct: 116 NAHGIFGVYPMREIYE-FSRIWAIGSGRKFAMGAMYAVYDQDLSAREIAE 164
>gi|212223310|ref|YP_002306546.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
gi|302595732|sp|B6YSW2|PSB1_THEON RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|212008267|gb|ACJ15649.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
Length = 203
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/184 (25%), Positives = 73/184 (39%), Gaps = 18/184 (9%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ TT + + VV+A D + SLG V+ KV ++ +AG AGS D +L
Sbjct: 4 KLKGTTTVGIVCKDGVVLAADRRASLGNMVLSKEVTKVFQIDDHLALAG-AGSVGDILSL 62
Query: 72 LERLEKKLEQYPNQLLR--SSVELAKDWRMDKYLRNLEAM------ILIA--DKTITLVI 121
+ L +++ Y ++ R S LA L M ++ +K +
Sbjct: 63 VRLLRAEVKLYRAKVGREISVKALATL--TSNILHGSRFMPYFGWFLIAGYDEKPALYSL 120
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNH 178
G V E + A GSG A + + EE + KA+ IA V+T
Sbjct: 121 DMAGGVTE--DKFTAAGSGMELAFAVLEDGYKDDINVEEGVKLALKAIKIATRRDVFTGD 178
Query: 179 NIVL 182
I L
Sbjct: 179 GITL 182
>gi|33322356|gb|AAQ06902.1|AF496235_2 heat shock protein precursor [Lactobacillus delbrueckii subsp.
lactis]
Length = 34
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANAR 47
TTI +V+ +G IAGDGQV+LG++++ K A+
Sbjct: 2 TTICSVKYNGQTAIAGDGQVTLGKSIIAKTTAK 34
>gi|258591517|emb|CBE67818.1| putative proteasome A-type and B-type [NC10 bacterium 'Dutch
sediment']
Length = 283
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 35/188 (18%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-----IIAGFAGSSADA 68
H TTIL +R +IAGD Q + G + ++R++ ++ K + IAG AG +
Sbjct: 49 HGTTILAMRFRDGALIAGDRQATEGYQI---SSRRIEKVYKADQYSAIAIAGVAGPCIEM 105
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI------- 121
L E E+ + L+ + + +K + ++A + +A +VI
Sbjct: 106 AKLFEVELTHYEKLEG------MSLSLEGKANKLSQMVKANLPMA-MQGLVVIPIFVGYD 158
Query: 122 --TGMGDVLE--------PENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSI 168
+G G + + E A GSGG A S + L T++ A + +A+
Sbjct: 159 VRSGDGKIFKYDVTGGRYEETDYYATGSGGKDARSTMKKLYRDRMTEDEAIAVGLEALID 218
Query: 169 AADICVYT 176
AA+ V T
Sbjct: 219 AAEEDVGT 226
>gi|242399181|ref|YP_002994605.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
gi|302595734|sp|C6A3R1|PSB2_THESM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|242265574|gb|ACS90256.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
Length = 199
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/185 (23%), Positives = 68/185 (36%), Gaps = 38/185 (20%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + ++ VV+A D Q SL V N +K+ + I AGS D L
Sbjct: 6 GTTTVGIKLKDGVVLAADTQASLDHMVETLNIKKILPI-TDRIAITTAGSVGDLQALARM 64
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-----VITGMGD 126
LE + + Y + + + K + NL + I +++ +I G G
Sbjct: 65 LEAEAKYYQFTWGKPMTA-----------KAMANL--LSNILNESKWFPYMVQIIIG-GY 110
Query: 127 VLEPE------------NGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD 171
V EP + GSG +A++ A E+A KA+ A
Sbjct: 111 VEEPTLASLDPLGGLIFDNYTTTGSGSPFAIAILEDGYKEDMSIEDARELAIKAVRTAGK 170
Query: 172 ICVYT 176
VYT
Sbjct: 171 RDVYT 175
>gi|254392855|ref|ZP_05008025.1| 20S proteasome beta-subunit [Streptomyces clavuligerus ATCC 27064]
gi|197706512|gb|EDY52324.1| 20S proteasome beta-subunit [Streptomyces clavuligerus ATCC 27064]
Length = 281
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 21/176 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ G VV+AGD + ++G + + + KV IAG AG + + L
Sbjct: 52 HGTTIVAATYPGGVVLAGDRRATMGNMIAQRDMEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTI--T 118
E E K+E L + L+ R + + ++ + ++ D+
Sbjct: 112 FQLELEHFE-KVEGTQLSLEGKANRLSAMIRGNLGMA-MQGLAVVPLFAGYDVDREKGRI 169
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E G A GSG +A + + L + A + +A+ AAD
Sbjct: 170 FSYDVTGGRSE-EQGFAATGSGSVFARGSLKKLYRPDLTEEQATTLVVQALYDAAD 224
>gi|254385050|ref|ZP_05000384.1| 20S proteasome beta-subunit [Streptomyces sp. Mg1]
gi|194343929|gb|EDX24895.1| 20S proteasome beta-subunit [Streptomyces sp. Mg1]
Length = 279
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 21/176 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ G VV+AGD + ++G + + + KV G AG++ A +++
Sbjct: 50 HGTTIVATTFPGGVVLAGDRRATMGNMIAQRDIEKVFP-ADEYSAVGIAGTAGLAVEMVK 108
Query: 74 RLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLRNLEAM----ILIA----------DKTIT 118
+ +LE + ++ +++ L K R+ +R+ M + + +K
Sbjct: 109 LFQLELEHFE-KVEGATLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGWDEGKEKGRI 167
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E+G A GSG +A + + L + A + +A+ AAD
Sbjct: 168 FSYDVTGGRSE-EHGFAATGSGSIFARGSMKKLYRPDLTEEQATTLVVQALYDAAD 222
>gi|315230761|ref|YP_004071197.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315183789|gb|ADT83974.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 199
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 68/184 (36%), Gaps = 32/184 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + ++ VV+A D Q SL V N +K+ + I AGS D L
Sbjct: 6 GTTTVGIKVKEGVVLAADTQASLDHMVETLNIKKILPI-TDRIAITTAGSVGDVQMLARM 64
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNLEAMILIADK--TITLVITGMGDVLE 129
LE + Y + + + K + NL + IL +K + I G V E
Sbjct: 65 LEAEARYYQFTWGKPMTA-----------KAMANLLSNILNENKWFPYLVQIIIGGYVEE 113
Query: 130 PE------------NGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICV 174
P + A GSG +A++ S A E+A +A+ A V
Sbjct: 114 PTLANLDPLGGLIFDDYTATGSGSPFAIAILEEGYRKDMSIEEARELAIRAVRTAGKRDV 173
Query: 175 YTNH 178
YT
Sbjct: 174 YTGD 177
>gi|296863655|pdb|3MKA|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863657|pdb|3MKA|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863659|pdb|3MKA|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863660|pdb|3MKA|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863662|pdb|3MKA|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863664|pdb|3MKA|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863666|pdb|3MKA|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863668|pdb|3MKA|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863670|pdb|3MKA|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863672|pdb|3MKA|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863674|pdb|3MKA|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863676|pdb|3MKA|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863678|pdb|3MKA|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
gi|296863680|pdb|3MKA|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
With Propetide And An T1a Mutation At Beta-Subunit
Length = 291
Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG--KGNIIAGFAGSSADAFTL 71
H TI+ ++ G VV+AGD + + G + + R VR++ G AG++A A
Sbjct: 56 HGATIVALKYPGGVVMAGDRRSTQGNMI---SGRDVRKVYITDDYTATGIAGTAAVAVEF 112
Query: 72 LERLEKKLEQY 82
+LE Y
Sbjct: 113 ARLYAVELEHY 123
>gi|326382282|ref|ZP_08203974.1| 20S proteasome A and subunit Bs [Gordonia neofelifaecis NRRL
B-59395]
gi|326199012|gb|EGD56194.1| 20S proteasome A and subunit Bs [Gordonia neofelifaecis NRRL
B-59395]
Length = 285
Score = 49.3 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V++AGD + ++G + + +KV + AG AG++ A ++
Sbjct: 49 HGTTIVAVGYPGGVILAGDRRATMGNLIATRDVQKV-YVTDEFTAAGIAGTAGIAIEMVR 107
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 108 LFAVELEHY 116
>gi|326329709|ref|ZP_08196030.1| proteasome, beta subunit [Nocardioidaceae bacterium Broad-1]
gi|325952474|gb|EGD44493.1| proteasome, beta subunit [Nocardioidaceae bacterium Broad-1]
Length = 278
Score = 49.3 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 25/178 (14%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ G V+IAGD + + G + + + RKV G AGS+ A L++
Sbjct: 46 HGTTIVAATFPGGVIIAGDRRATQGNLIAERDMRKVFP-ADEYSAVGIAGSAGLAVELVK 104
Query: 74 RLEKKLEQY---PNQLLRSSVELAKDWRMDKYLRNLEAM----ILI------ADKT---- 116
+ +LE Y L S+E K R+ +R AM +++ D
Sbjct: 105 LFQTELEHYEKIEGTTL--SIE-GKASRLSALVRGNLAMAMQGLVVVPLFVGFDPDAGVG 161
Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAAD 171
G E + G +GSG +A A + L T + + +A+ AAD
Sbjct: 162 KIYGYDPTGGRYE-QTGYAGVGSGSLFAKGALKKLYRTDLDEDTLVAVLVQALYDAAD 218
>gi|325119343|emb|CBZ54896.1| PsmB (EC 3.4.25.1), related [Neospora caninum Liverpool]
Length = 286
Score = 49.3 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ TTI V +G VV+ D + + G V N K+ R+ AG AG++AD
Sbjct: 47 PARKTGTTICGVVCNGAVVLGADTRATEGTIVADKNCSKLHRIADNMYAAG-AGTAADLD 105
Query: 70 TLLERLEKKLEQYPNQ 85
+ + L ++E +
Sbjct: 106 HMCDWLAVQVELHRLN 121
>gi|72162191|ref|YP_289848.1| proteasome subunit beta [Thermobifida fusca YX]
gi|123629303|sp|Q47NZ4|PSB_THEFY RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|71915923|gb|AAZ55825.1| bacterial proteasome, beta component. Threonine peptidase. MEROPS
family T01B [Thermobifida fusca YX]
Length = 282
Score = 49.3 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 74/179 (41%), Gaps = 27/179 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
ATTI+ V G VV+AGD + + G + + K+ R + + + G AGS+ L +
Sbjct: 53 EATTIVAVVFSGGVVLAGDRRATSGNVIANRDMDKLFRTDEFSAV-GIAGSAGIGIELAK 111
Query: 74 RLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAM--------ILIADKTI-- 117
+ +LE Y P L + LA R + L AM ++ D +
Sbjct: 112 LFQVELEHYEKREGRPLSLEGKANRLATMIRSNLGL----AMQGFVVVPLLVGYDTSRGE 167
Query: 118 --TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD 171
+G E E+ AIGSG YA A + L A +A +A+ AAD
Sbjct: 168 GRIFSYDPVGGCYE-EHRYHAIGSGSVYAKGALKKLYRDDLAETDAALVALQALYDAAD 225
>gi|294811696|ref|ZP_06770339.1| 20S proteasome beta-subunit [Streptomyces clavuligerus ATCC 27064]
gi|326440120|ref|ZP_08214854.1| proteasome subunit beta [Streptomyces clavuligerus ATCC 27064]
gi|294324295|gb|EFG05938.1| 20S proteasome beta-subunit [Streptomyces clavuligerus ATCC 27064]
Length = 258
Score = 49.3 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 21/176 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ G VV+AGD + ++G + + + KV IAG AG + + L
Sbjct: 29 HGTTIVAATYPGGVVLAGDRRATMGNMIAQRDMEKVFPADEYSAVGIAGTAGLAVEMVKL 88
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTI--T 118
E E K+E L + L+ R + + ++ + ++ D+
Sbjct: 89 FQLELEHFE-KVEGTQLSLEGKANRLSAMIRGNLGMA-MQGLAVVPLFAGYDVDREKGRI 146
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G E E G A GSG +A + + L + A + +A+ AAD
Sbjct: 147 FSYDVTGGRSE-EQGFAATGSGSVFARGSLKKLYRPDLTEEQATTLVVQALYDAAD 201
>gi|297161888|gb|ADI11600.1| proteasome subunit beta [Streptomyces bingchenggensis BCW-1]
Length = 258
Score = 49.3 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 43/187 (22%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ G VV+AGD + ++G + + + KV G AG+ A +++
Sbjct: 29 HGTTIVGATFPGGVVLAGDRRATMGNLISQRDVEKVFP-ADEYSAVGIAGTLGFAVEMVK 87
Query: 74 RLEKKLEQY---------------------PNQLLRSSVELA-----KDWRMDKYLRNLE 107
+ +LE + L + LA W +D+
Sbjct: 88 LFQLELEHFEKVEGTTLSLEGKANRLSTMIRGNLGMAMQGLAVVPIFAGWDVDR------ 141
Query: 108 AMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RK 164
+K G E E+G A GSG +A A + L + + A +
Sbjct: 142 ------EKGRIFSYDVTGGRSE-EHGFAATGSGSLFARGALKKLYREDLTESDTAIAVVQ 194
Query: 165 AMSIAAD 171
A+ AAD
Sbjct: 195 ALYDAAD 201
>gi|21220140|ref|NP_625919.1| 20S proteasome beta-subunit precursor [Streptomyces coelicolor
A3(2)]
gi|289772643|ref|ZP_06532021.1| 20S proteasome beta-subunit [Streptomyces lividans TK24]
gi|81415865|sp|Q7AKQ5|PSB_STRCO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|3676748|gb|AAC64284.1| 20S proteasome beta-subunit precursor [Streptomyces coelicolor
A3(2)]
gi|6119686|emb|CAB59497.1| 20S proteasome beta-subunit precursor [Streptomyces coelicolor
A3(2)]
gi|289702842|gb|EFD70271.1| 20S proteasome beta-subunit [Streptomyces lividans TK24]
Length = 281
Score = 48.9 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G VV+AGD + ++G + + + KV G AG++ A +++
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNMIAQRDIEKVFP-ADEYSAVGIAGTAGLAVEMVK 110
Query: 74 RLEKKLEQY 82
+ +LE +
Sbjct: 111 LFQLELEHF 119
>gi|308198291|ref|XP_001386964.2| 20S proteasome, regulatory subunit beta type PSMB7/PSMB10/PUP1
[Scheffersomyces stipitis CBS 6054]
gi|149388951|gb|EAZ62941.2| 20S proteasome, regulatory subunit beta type PSMB7/PSMB10/PUP1
[Pichia stipitis CBS 6054]
Length = 267
Score = 48.9 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + G VVIA D + + G V N K+ RL I AG++AD + +
Sbjct: 29 GTTIVGCKFKGGVVIAADTRATAGSIVADKNCEKLHRLAP-KIWCAGAGTAADTEMVTQL 87
Query: 75 LEKKLEQY---PNQLLR--SSVELAKDWRMDKYLRNLEAMILIADKT----ITLVITGMG 125
+ LE + N+ R +++ + K + KY +L A +++A L + G
Sbjct: 88 IASNLELHGLYQNRQPRVITALTMLKQ-HLFKYQGHLGAYLIVAGVDPTGAHLLSVQAHG 146
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
+ S GS +L+A A++ T + +A+ + AD
Sbjct: 147 ST-----DIGKYQSLGSGSLAA-MAVLETNFKEDMTKEEAIKLCAD 186
>gi|36059|emb|CAA44603.1| RING12 [Homo sapiens]
gi|123296527|emb|CAM26264.1| proteasome (prosome, macropain) subunit beta type 9 (large
multifunctional protease 2) [Homo sapiens]
gi|168983775|emb|CAQ08907.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|168985349|emb|CAQ08497.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|228223|prf||1718344A RING12 gene
Length = 219
Score = 48.9 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G+ V+ K+ L + +I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHE-HIYCALSGSAADAQAVADM 78
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+LE + +L ++ + ++ KY +L A +++A D+ + G
Sbjct: 79 AAYQLELHGIELEEPPLVLAAANVVRN-ISYKYREDLSAHLMVAGWDQREGGQVYGTLGG 137
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ GSG ++ A S EE
Sbjct: 138 MLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEE 170
>gi|325048250|emb|CBW54670.1| 20S proteasome beta-subunit [Streptomyces sp. JS360]
Length = 281
Score = 48.9 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 24/172 (13%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT+L + V+IAGD + ++G + + + KV + FAGS A L++
Sbjct: 53 HGTTVLALVYRDGVLIAGDRRATMGHMISQRDLEKVHP-ADDHTALAFAGSVGLALDLVK 111
Query: 74 RLE------KKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEA--MILIADKTITLVITG 123
+ +K+E P L + L R + + ++ L ++ D TG
Sbjct: 112 LYQVELTHFEKIEGIPMTLNAKATRLGHLVRQNLGQAMQGLAVVPLLAGYDPE-----TG 166
Query: 124 MGDVLEPE--------NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
G V + A GSG +A A + L + S + A A+
Sbjct: 167 KGRVFGYDITGGRFEREDFHAEGSGSVFARGALKKLYRPEMSRRDAALTALQ 218
>gi|148227692|ref|NP_001079339.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Xenopus laevis]
gi|2055297|dbj|BAA19759.1| LMP2 [Xenopus laevis]
gi|213623168|gb|AAI69381.1| Proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional protease 2) [Xenopus laevis]
gi|213624900|gb|AAI69377.1| Proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional protease 2) [Xenopus laevis]
Length = 215
Score = 48.9 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 16/169 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G V+ K+ + + I +GS+ADA + +
Sbjct: 16 GTTIIAVEFDGGVVLGSDSRVSAGDAVVNRVFNKLAPVHQ-RIYCALSGSAADAQAVADM 74
Query: 75 LEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGM--G 125
+E + + L+ ++ L K KY + A +++A D+ + G G
Sbjct: 75 AHYHMEVHSIEMEAPPLVLAAANLIKG-ISYKYKEEIMAHLIVAGWDRKHGGQVYGTLGG 133
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
++ GSG +Y + S EE A +A+S+A +
Sbjct: 134 MIIR--QPFTIGGSGSTYIYGFVDSKFKPGMSREECERFAVQALSLAME 180
>gi|195376901|ref|XP_002047231.1| GJ13326 [Drosophila virilis]
gi|194154389|gb|EDW69573.1| GJ13326 [Drosophila virilis]
Length = 328
Score = 48.9 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 2 VVMGDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
++ H + + TT++ + + V+I D + + V A + K+RRL NI G
Sbjct: 28 LMQTGFHPPLPFNSGTTVVGLHFNKGVMIGTDTRATRRNIVSSAESPKIRRLHN-NIYCG 86
Query: 61 FAGSSADAFTLLERLEKKLEQY--PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
+G ++D L + LEK+LE + V AK + ++NL +++ +
Sbjct: 87 GSGYASDLDNLTQLLEKQLELHYKSINQRHVPVVCAKQLTKEALMQNLGRIMV------S 140
Query: 119 LVITG 123
VI G
Sbjct: 141 FVIGG 145
>gi|71666388|ref|XP_820153.1| proteasome beta-1 subunit [Trypanosoma cruzi strain CL Brener]
gi|70885487|gb|EAN98302.1| proteasome beta-1 subunit, putative [Trypanosoma cruzi]
Length = 284
Score = 48.9 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 67/159 (42%), Gaps = 16/159 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V G VV+A D + S G V+ + K+ +L + I +GS+AD L E+
Sbjct: 54 GTTIMAVSFKGGVVLAADSRTSTGTYVVNRASNKLTKLSE-KIYCCRSGSAADTQALAEQ 112
Query: 75 LEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIA-----DKTITLVITG 123
LE Y P + ++ K M+K+ N+ A I++A + I
Sbjct: 113 TANYLESYEIDTSKPVNVTTAANIFKKLCYMNKW--NISAGIIVAGYDPLNGGSVYSIPS 170
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
G ++ + GSG + S A T S EE
Sbjct: 171 GGSCVKLDY--ALGGSGSIFLYSFFDANYKTGMSKEECV 207
>gi|256788748|ref|ZP_05527179.1| 20S proteasome beta-subunit precursor [Streptomyces lividans
TK24]
Length = 258
Score = 48.5 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G VV+AGD + ++G + + + KV G AG++ A +++
Sbjct: 29 HGTTIVAVTFPGGVVLAGDRRATMGNMIAQRDIEKVFP-ADEYSAVGIAGTAGLAVEMVK 87
Query: 74 RLEKKLEQY 82
+ +LE +
Sbjct: 88 LFQLELEHF 96
>gi|294889671|ref|XP_002772914.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
gi|239877494|gb|EER04730.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
Length = 204
Score = 48.5 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 68/171 (39%), Gaps = 29/171 (16%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ ++ VV+ D + S G V +RKV RL I +GS+AD L +
Sbjct: 7 GTTIMAMKFKDGVVLGADSRTSTGGYVANRVSRKVTRL-HDRIFVCRSGSAADTQFLSSK 65
Query: 75 LEKKLEQYPNQL-------LRSSVELAKDWRMDKYL-----RNLEAMILIADKTIT---- 118
++ L + N L ++++ L + L + L A +++A T
Sbjct: 66 VKYFLNAHANDLPLDRLPKVKTAANLM------RLLAYNNKQYLTAGLIVAGWDQTEGPQ 119
Query: 119 -LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKA 165
I G ++ + + GSG +Y L S AE+ KA
Sbjct: 120 VYSIPLGGTII--KQNIATGGSGSTYITGLVDHLYRPDMSREEAEDFVAKA 168
>gi|51036691|ref|NP_001003660.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Xenopus (Silurana)
tropicalis]
gi|37781212|gb|AAP36732.1| proteasome beta subunit [Xenopus (Silurana) tropicalis]
Length = 215
Score = 48.5 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 15/183 (8%)
Query: 1 MVVMGDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA 59
M V + + + ++ TTI+ V DG VV+ D +VS G V+ K+ + + I
Sbjct: 1 MPVSSNPYMSCEVSTGTTIIAVEFDGGVVVGSDSRVSAGDAVVNRVFNKLAPVHQ-RIYC 59
Query: 60 GFAGSSADAFTLLERLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA- 113
+GS+ADA + + +E + + L+ ++ L K KY + A +++A
Sbjct: 60 ALSGSAADAQAVADMAHYHMEVHSVEMEAPPLVLAAANLIKG-ISYKYKEEIVAHLIVAG 118
Query: 114 -DKTITLVITGM-GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
D + G G ++ GSG +Y + S EE A +A+S+
Sbjct: 119 WDSKNGGQVYGTLGGMIT-RQPFAIGGSGSTYIYGFVDSTFKPGMSREECEKFAVQALSL 177
Query: 169 AAD 171
A +
Sbjct: 178 ATE 180
>gi|311900014|dbj|BAJ32422.1| putative 20S proteasome beta-subunit [Kitasatospora setae KM-6054]
Length = 281
Score = 48.5 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ DG VV+AGD + ++G + + + KV G AG++ A ++
Sbjct: 51 HGTTIVAAVFDGGVVLAGDRRATMGNVIAQRDIEKVFP-ADEYSAVGIAGTAGLAVEMVR 109
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 110 LFQLELEHY 118
>gi|119962637|ref|YP_947919.1| 20S proteasome beta-subunit precursor [Arthrobacter aurescens TC1]
gi|119949496|gb|ABM08407.1| putative 20S proteasome beta-subunit precursor [Arthrobacter
aurescens TC1]
Length = 324
Score = 48.5 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G V++AGD + ++G + + KV + +++ G AG++ A +
Sbjct: 100 HATTIVALTYAGGVLMAGDRRATMGNIIASRHIEKVFPADEYSVL-GIAGTAGLAIDITR 158
Query: 74 RLEKKLEQY---PNQLLRSSVELAKDWRMDKYLR-----NLEAMIL---------IADKT 116
+ +LE Y LL S V K R+ +R ++ M + +A
Sbjct: 159 LFQVELEHYEKIEGTLL-SLV--GKANRLGAMIRGNLPMAMQGMAVIPLFAGFDQVAGVG 215
Query: 117 ITL---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAA 170
V G + LE ++GSG +A A + L S E+ +A +A+ AA
Sbjct: 216 RLFSYDVTGGRYEELEHH----SVGSGSVFARGALKKLWKPNLSEEDAISVAVEALYDAA 271
Query: 171 D 171
D
Sbjct: 272 D 272
>gi|14520958|ref|NP_126433.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|17380268|sp|Q9V0N9|PSB2_PYRAB RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|5458175|emb|CAB49664.1| psmB-like proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 207
Score = 48.5 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K TT + + VV+A D + SLG V N K+ ++ + IAG AG D L
Sbjct: 7 KFKGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAG-AGDVGDILNL 65
Query: 72 LERL--EKKLEQYPNQLLRSSVE-----LAKDWRMDKYLRNLEAMILIA---DKTITLVI 121
+ L E KL + R SV+ LA + L L A L+ +K +
Sbjct: 66 VRLLRAEAKLYYAQSG-KRMSVKALATLLANMLNGARMLPYL-AWFLVGGFDEKPRLYSV 123
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNH 178
MG + E + +A GSG +A S + E IA +A++ A V++
Sbjct: 124 DMMGGITE--DKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGD 181
Query: 179 NIVLETLKVG 188
I++ T+
Sbjct: 182 GIMVVTITEE 191
>gi|322816363|gb|EFZ24690.1| proteasome beta-1 subunit, putative [Trypanosoma cruzi]
Length = 284
Score = 48.5 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 67/159 (42%), Gaps = 16/159 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V G VV+A D + S G V+ + K+ +L + I +GS+AD L E+
Sbjct: 54 GTTIMAVAFKGGVVLAADSRTSTGTYVVNRASNKLTKLAE-KIYCCRSGSAADTQALAEQ 112
Query: 75 LEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIA-----DKTITLVITG 123
LE Y P + ++ K M+K+ N+ A I++A + I
Sbjct: 113 TANYLESYEIDTSKPVNVTTAANIFKKLCYMNKW--NISAGIIVAGYDPLNGGSVYSIPS 170
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
G ++ + GSG + S A T S EE
Sbjct: 171 GGSCVKLDY--ALGGSGSIFLYSFFDANYKTGMSKEECV 207
>gi|54696310|gb|AAV38527.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional protease 2) [synthetic construct]
gi|61367394|gb|AAX42991.1| proteasome subunit beta type 9 [synthetic construct]
Length = 220
Score = 48.5 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG +V+ D +VS G+ V+ K+ L + I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGIVMGSDSRVSAGEAVVNRVFDKLSPLHE-RIYCALSGSAADAQAVADM 78
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+LE + +L ++ + ++ KY +L A +++A D+ + G
Sbjct: 79 AAYQLELHGIELEEPPLVLAAANVVRN-ISYKYREDLSAHLMVAGWDQREGGQVYGTLGG 137
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ GSG ++ A S EE
Sbjct: 138 MLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEE 170
>gi|71663121|ref|XP_818557.1| proteasome beta-1 subunit [Trypanosoma cruzi strain CL Brener]
gi|70883816|gb|EAN96706.1| proteasome beta-1 subunit, putative [Trypanosoma cruzi]
Length = 284
Score = 48.5 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 67/159 (42%), Gaps = 16/159 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V G VV+A D + S G V+ + K+ +L + I +GS+AD L E+
Sbjct: 54 GTTIMAVAFKGGVVLAADSRTSTGTYVVNRASNKLTKLAE-KIYCCRSGSAADTQALAEQ 112
Query: 75 LEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIA-----DKTITLVITG 123
LE Y P + ++ K M+K+ N+ A I++A + I
Sbjct: 113 TANYLESYETDTSKPVNVTTAANIFKKLCYMNKW--NISAGIIVAGYDPLNGGSVYSIPS 170
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
G ++ + GSG + S A T S EE
Sbjct: 171 GGSCVKLDY--ALGGSGSIFLYSFFDANYKTGMSKEECV 207
>gi|290992073|ref|XP_002678659.1| predicted protein [Naegleria gruberi]
gi|284092272|gb|EFC45915.1| predicted protein [Naegleria gruberi]
Length = 271
Score = 48.5 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 68/175 (38%), Gaps = 28/175 (16%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G V N K+ + G AG++AD
Sbjct: 34 GTTICGVVYKDGVVLGADTRATEGPIVADKNCEKIHYIAPNIYCCG-AGTAADTENSTAL 92
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT--LVITGMGDV----- 127
+ KL QL R + K R+D + + M+ ++ LV+ G+ DV
Sbjct: 93 ISSKL-----QLHRYAT--GKQSRVDTSMTMFKRMLWKYQGHVSAALVLGGV-DVNGPSL 144
Query: 128 --LEPEN-----GVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
+ P + +GSG A+S A S A+ I KA I+A I
Sbjct: 145 YTIYPHGSTDKLPFVTMGSGSLAAMSVFEAEYKDDMSEEEAKAIVHKA--ISAGI 197
>gi|47216873|emb|CAG11680.1| unnamed protein product [Tetraodon nigroviridis]
Length = 214
Score = 48.5 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG V+ D +VS G+ V+ K+ L I +GS+ADA T+ E
Sbjct: 16 GTTIIAVEFDGGAVLGSDSRVSAGKAVVNRVMNKLSPL-HDKIYCALSGSAADAQTIAEI 74
Query: 75 LEKKLEQYPNQLLR---SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLE 129
+ +L+ + + S+ L K+ KY L A +++A D+ + + L
Sbjct: 75 VNYQLDVHRSARTPKVGSAASLVKN-ISYKYKEELSAHLIVAGWDRRKGGQVFATLNGLL 133
Query: 130 PENGVMAIGSGGSY 143
GSG SY
Sbjct: 134 ARQPFAVGGSGSSY 147
>gi|167379227|ref|XP_001735049.1| proteasome subunit beta type-6 precursor [Entamoeba dispar
SAW760]
gi|165903089|gb|EDR28742.1| proteasome subunit beta type-6 precursor, putative [Entamoeba
dispar SAW760]
Length = 213
Score = 48.1 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G V++ DG+ S+G V+ K+R + +I AG+SA + T+ +
Sbjct: 14 GTTIIGVVYNGGVLLGADGRTSMGSIVVNRCKNKIR-MVSDSIGMCMAGTSAHSETIADY 72
Query: 75 LEKKLEQYPNQ 85
+ L Y Q
Sbjct: 73 VRHSLRMYTAQ 83
>gi|296139866|ref|YP_003647109.1| 20S proteasome A and subunit betas [Tsukamurella paurometabola DSM
20162]
gi|296028000|gb|ADG78770.1| 20S proteasome A and B subunits [Tsukamurella paurometabola DSM
20162]
Length = 273
Score = 48.1 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ ++ DG V+IAGD + ++G + + + K + G AG++ A +++
Sbjct: 46 HGTTIVAIKFDGGVLIAGDRRATMGHLIAQRDITKT-FVTDDLTAVGIAGTAGIAKQIVK 104
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 105 LFTVELEHY 113
>gi|282864338|ref|ZP_06273394.1| 20S proteasome A and B subunits [Streptomyces sp. ACTE]
gi|282560825|gb|EFB66371.1| 20S proteasome A and B subunits [Streptomyces sp. ACTE]
Length = 258
Score = 48.1 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 21/176 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ G VV+AGD + ++G + + + +KV IAG AG + + L
Sbjct: 29 HGTTIVAATFPGGVVLAGDRRATMGNMIAQRDMQKVFPADEYSAVGIAGTAGLAIEMVKL 88
Query: 72 L----ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTI--T 118
E E K+E L + L+ R + + ++ + ++ D+
Sbjct: 89 FQLELEHFE-KVEGTTLSLEGKANRLSTMIRGNLSMA-MQGLAVVPLFAGFDVDREKGRI 146
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
G E E G A GSG +A + + L + E+ + +A+ AAD
Sbjct: 147 FSYDVTGGRSE-EQGYAATGSGSLFARGSMKKLYRDDLTEEQALTLVVQALYDAAD 201
>gi|19074754|ref|NP_586260.1| PROTEASOME B-TYPE SUBUNIT DELTA CHAIN [Encephalitozoon cuniculi
GB-M1]
gi|74664171|sp|Q8SR11|PSB6_ENCCU RecName: Full=Probable proteasome subunit beta type-6; AltName:
Full=26S proteasome beta-type subunit PRE3; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE3;
Flags: Precursor
gi|19069396|emb|CAD25864.1| PROTEASOME B-TYPE SUBUNIT DELTA CHAIN [Encephalitozoon cuniculi
GB-M1]
Length = 203
Score = 48.1 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 18/167 (10%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+M ++ +M TTI+ ++ D V+I D + S+G V K+ ++ I +
Sbjct: 1 MMSNEK---EMTGTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQI-TDKIFVCRS 56
Query: 63 GSSADAFTLLERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIA--- 113
GSSAD + L L Y Q+ R++ +K + L A +++A
Sbjct: 57 GSSADTQMISSYLRMYLSMYSQLEDSIPQVQRAAALASKIIYENPSLL---AGLIVAGYD 113
Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
DK I+ G + E GSG ++ + S EE
Sbjct: 114 DKPRVFNISLGGSLTE--RDWAIGGSGSAFIYGYCDVNWRSGMSLEE 158
>gi|190346667|gb|EDK38809.2| hypothetical protein PGUG_02907 [Meyerozyma guilliermondii ATCC
6260]
Length = 265
Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + G VVIA D + + G V N K+ RL I AG++AD + +
Sbjct: 29 GTTIVGCKFAGGVVIAADTRATAGSIVADKNCEKLHRLAP-QIWCAGAGTAADTEMVTQL 87
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT----G 123
+ LE + R +++ + K + KY +L A +++A D T +++ G
Sbjct: 88 IASNLELHSLSQNRKPRVITALTMLKQ-HLFKYQGHLGAYLIVAGVDPTGAHLMSVQAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
D+ ++GSG A++ + EE +
Sbjct: 147 STDI----GQYQSLGSGSLAAMAVLETHWKPDMTKEEAVQ 182
>gi|37781216|gb|AAP36733.1| proteasome beta subunit [Xenopus (Silurana) tropicalis]
gi|165970624|gb|AAI58548.1| Unknown (protein for MGC:186705) [Xenopus (Silurana) tropicalis]
Length = 215
Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G V+ K+ + + I +GS+ADA + +
Sbjct: 16 GTTIIAVEFDGGVVVGSDSRVSAGDAVVNRVFNKLAPVHQ-RIYCALSGSAADAQAVADM 74
Query: 75 LEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGM-GD 126
+E + + L+ ++ L K KY + A +++A D + G G
Sbjct: 75 AHYHMEVHSIEMEASPLVLAAANLIKG-ISYKYKEEIAAHLIVAGWDSKNGGQVYGTLGG 133
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
++ GSG +Y + S EE A +A+S+A +
Sbjct: 134 MIT-RQPFAIGGSGSTYIYGFVDSTFKPGMSREECETFAVQALSLAME 180
>gi|226471394|emb|CAX70778.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
Length = 205
Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V + N K+ R+ G AG++AD +
Sbjct: 38 GTTICGVVFKNGIVLGADTRATEGNIVAEKNCSKIHRIADNIYCCG-AGTAADTQMVTLM 96
Query: 75 LEKKLEQYPNQLLR 88
+ ++E + R
Sbjct: 97 ISSQVELHRLNTGR 110
>gi|332159619|ref|YP_004424898.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
gi|331035082|gb|AEC52894.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
Length = 204
Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 16/186 (8%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K TT + + VV+A D + SLG V N K+ ++ + IAG AG D L
Sbjct: 4 KFKGTTTVGIVCKDGVVLAADRRASLGNIVYARNVTKIHKIDEHLAIAG-AGDVGDILNL 62
Query: 72 LERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA---DKTITLVIT 122
+ L + + Y Q R + LA KY + A L+ +K +
Sbjct: 63 VRLLRAEAKLYYAQFGREMSARALATLLANILNGYKYFPYM-AWFLVGGYDEKARLYSVD 121
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHN 179
+G + E + MA GSG +A S A S + +E + KA++ A V++
Sbjct: 122 AVGGITE--DKYMAAGSGMEFAYSILDAEYSDDITVKEGVKLAVKAINTAIKRDVFSGDG 179
Query: 180 IVLETL 185
I++ T+
Sbjct: 180 ILVVTI 185
>gi|146418425|ref|XP_001485178.1| hypothetical protein PGUG_02907 [Meyerozyma guilliermondii ATCC
6260]
Length = 265
Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 17/160 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + G VVIA D + + G V N K+ RL I AG++AD + +
Sbjct: 29 GTTIVGCKFAGGVVIAADTRATAGSIVADKNCEKLHRLAP-QIWCAGAGTAADTEMVTQL 87
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT----G 123
+ LE + R +++ + K + KY +L A +++A D T +++ G
Sbjct: 88 IASNLELHSLSQNRKPRVITALTMLKQ-HLFKYQGHLGAYLIVAGVDPTGAHLMSVQAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
D+ ++GSG A++ + EE +
Sbjct: 147 STDI----GQYQSLGSGSLAAMAVLETHWKPDMTKEEAVQ 182
>gi|302595913|sp|A1R6Q7|PSB_ARTAT RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
Length = 269
Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G V++AGD + ++G + + KV + +++ G AG++ A +
Sbjct: 45 HATTIVALTYAGGVLMAGDRRATMGNIIASRHIEKVFPADEYSVL-GIAGTAGLAIDITR 103
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 104 LFQVELEHY 112
>gi|324999221|ref|ZP_08120333.1| proteasome subunit beta [Pseudonocardia sp. P1]
Length = 298
Score = 47.8 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G VVIAGD + + G + + + KV + + G AGS+ A ++
Sbjct: 67 HGTTIVALTFSGGVVIAGDRRATAGNVIAQRDIEKV-FVTDHHSAVGIAGSAGIALEMVR 125
Query: 74 RLEKKLEQY 82
LE Y
Sbjct: 126 LFGVDLEHY 134
>gi|45184943|ref|NP_982661.1| AAR119Wp [Ashbya gossypii ATCC 10895]
gi|44980552|gb|AAS50485.1| AAR119Wp [Ashbya gossypii ATCC 10895]
Length = 259
Score = 47.8 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ +G VVIA D + + G V N K+ R+ I AG++AD +
Sbjct: 29 GTTIVGVKFEGGVVIAADTRSTQGPIVANKNCEKLHRIAP-RIWCAGAGTAADTEAVTWL 87
Query: 75 LEKKLEQYP 83
+ LE +
Sbjct: 88 IGSNLELHS 96
>gi|221480786|gb|EEE19215.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
Length = 368
Score = 47.8 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G V N K+ R+ AG AG+SAD + +
Sbjct: 134 GTTICGVVCKDGVVLGADTRATEGTIVADKNCSKLHRIADNMYAAG-AGTSADLDHMCDW 192
Query: 75 LEKKLEQYPNQ 85
L ++E +
Sbjct: 193 LAVQVELHRLN 203
>gi|237845137|ref|XP_002371866.1| proteasome subunit beta type 7, putative [Toxoplasma gondii ME49]
gi|211969530|gb|EEB04726.1| proteasome subunit beta type 7, putative [Toxoplasma gondii ME49]
gi|221501451|gb|EEE27227.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 368
Score = 47.8 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G V N K+ R+ AG AG+SAD + +
Sbjct: 134 GTTICGVVCKDGVVLGADTRATEGTIVADKNCSKLHRIADNMYAAG-AGTSADLDHMCDW 192
Query: 75 LEKKLEQYPNQ 85
L ++E +
Sbjct: 193 LAVQVELHRLN 203
>gi|255722862|ref|XP_002546365.1| proteasome component PUP1 precursor [Candida tropicalis MYA-3404]
gi|240130882|gb|EER30444.1| proteasome component PUP1 precursor [Candida tropicalis MYA-3404]
Length = 272
Score = 47.8 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 19/161 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + VVIA D + + G V N K+ RL I AG++AD + +
Sbjct: 29 GTTIVGCKFKNGVVIAADTRATSGPIVADKNCEKLHRLAP-KIWCAGAGTAADTEMVTQL 87
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKT----ITLVITGMG 125
+ LE + R +++ + K + KY +L A +++A + + G
Sbjct: 88 IASNLELHALSQNRQPRVIAALTMLKQ-HLFKYQGHLGAYLIVAGVDPTGAHLMSVQAHG 146
Query: 126 DVLEPENGVM---AIGSGGSYALSAARALMSTQNSAEEIAR 163
+ ++GSG A++ + EE +
Sbjct: 147 ST-----DIAKYQSLGSGSLNAMAVLETYFKEDMTKEEAIK 182
>gi|163840778|ref|YP_001625183.1| 20S proteasome beta-subunit [Renibacterium salmoninarum ATCC 33209]
gi|302595779|sp|A9WSI1|PSB_RENSM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|162954254|gb|ABY23769.1| 20S proteasome beta-subunit [Renibacterium salmoninarum ATCC 33209]
Length = 279
Score = 47.8 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + G V++AGD + ++G + + KV G + G AG++ A + +
Sbjct: 55 HATTIVAMTFAGGVLMAGDRRATMGTMIASRHIEKVFP-ADGYSVLGIAGTAGLAIDITK 113
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 114 LFQVELEHY 122
>gi|194763855|ref|XP_001964048.1| GF20928 [Drosophila ananassae]
gi|190618973|gb|EDV34497.1| GF20928 [Drosophila ananassae]
Length = 1093
Score = 47.8 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 44/208 (21%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TT++ + G V+IA D + ++G V MK++ RK+ + + NI AG AG + D L++
Sbjct: 49 GTTVVGLIYRGGVIIASDSRATVGNMVPMKSS-RKIHPI-QDNIFAGGAGVARDIRALVD 106
Query: 74 RLEKKLEQYPNQL------LRSSVELAKDWRMDKYLRNLEAMILIA--DKT--ITLV--I 121
++ + +R + + K + +Y L A +IA DK
Sbjct: 107 LTHAQMNIHRMNTGGRVVPVRCANQFVKQ-VLFRYRGALGANFIIAGVDKEGAHLFCTRF 165
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD------- 171
G DVL IGSGG A+ ++ S A + +A +AA
Sbjct: 166 DGTTDVL----PYATIGSGGMPAMGILETRFKSRMSESAARGLIVEA--VAAGLLNDPFS 219
Query: 172 -----ICV----YTNHNIVLETLKVGDE 190
IC+ YT + LE D+
Sbjct: 220 GNETHICIIRKDYT---VNLEIDSREDD 244
>gi|28273089|dbj|BAC56920.1| proteosome A [Theileria orientalis]
Length = 267
Score = 47.8 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ ++ + V++A D + S GQ V+ ARK+ R+ ++ +GS+AD+ TL
Sbjct: 41 GTTIIAMKFNDGVLLAADSRTSSGQLVVNRVARKITRILP-SVFMLRSGSAADSQTLSTI 99
Query: 75 LEKKLEQYPNQLLR 88
L + QL R
Sbjct: 100 LRYHAQSLRQQLRR 113
>gi|328881285|emb|CCA54524.1| Proteasome subunit beta , bacterial [Streptomyces venezuelae ATCC
10712]
Length = 279
Score = 47.8 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 65/187 (34%), Gaps = 43/187 (22%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ G VV+AGD + ++G + + + KV G AG++ A +++
Sbjct: 50 HGTTIVAATFAGGVVLAGDRRATMGNMIAQRDIEKVFP-ADEYSAVGIAGTAGLAVEMVK 108
Query: 74 RLEKKLEQY---------------------PNQLLR-----SSVELAKDWRMDKYLRNLE 107
+ +LE + L + V L W K
Sbjct: 109 LFQLELEHFEKVEGVTLSLEGKANRLSTMIRGNLGMAMQGLAVVPLFAGWDEGK------ 162
Query: 108 AMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARK 164
+K G E E G A GSG +A + + L + A + +
Sbjct: 163 ------EKGRIFSYDVTGGRSE-EQGYAATGSGSIFARGSMKKLYRADLTEEQATTLVVQ 215
Query: 165 AMSIAAD 171
A+ AAD
Sbjct: 216 ALYDAAD 222
>gi|297560457|ref|YP_003679431.1| 20S proteasome A and subunit betas [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296844905|gb|ADH66925.1| 20S proteasome A and B subunits [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 280
Score = 47.4 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 33/181 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
ATTI+ + G V++AGD + + G + + KV R + + +A AGS+ L
Sbjct: 52 ATTIVALTFPGGVLLAGDRRATQGNIIANRDMEKVFRTDEYSAVA-IAGSAGFGIELARL 110
Query: 75 LEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAM-------ILIADKTITLVI 121
+ +LE Y RS + +LA+ R + L AM +L+
Sbjct: 111 YQVELEHYEKMEGRSLSLEGKANKLAQMVRGNLGL----AMQGFVVVPLLVGYDEN---- 162
Query: 122 TGMGDVLE--------PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
TG G V E +IGSG +A A + L A ++A +A+ AA
Sbjct: 163 TGQGRVFSYDATGGRYEEQRYHSIGSGSVFARGAIKKLYRDDLDQTGAAKVALEALYDAA 222
Query: 171 D 171
D
Sbjct: 223 D 223
>gi|322489333|emb|CBZ24592.1| putative proteasome beta-1 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 283
Score = 47.4 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTIL V G VV+A D + S G V+ + K+ +L K I +GS+AD L ER
Sbjct: 54 GTTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTK-KIYCCRSGSAADTQALAER 112
Query: 75 LEKKLEQYPNQL 86
+ L Y +
Sbjct: 113 VSNYLGSYQTDI 124
>gi|255574159|ref|XP_002527995.1| proteasome subunit beta type 6,9, putative [Ricinus communis]
gi|223532621|gb|EEF34407.1| proteasome subunit beta type 6,9, putative [Ricinus communis]
Length = 231
Score = 47.4 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L N+ +GS+AD+ + +
Sbjct: 10 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQL-TDNVYVCRSGSAADSQIVSDY 68
Query: 75 LEKKLEQYPNQL-LRSSVELAKDW-RMDKYLRN--LEAMILIA-----DKTITLVITGMG 125
+ L Q+ QL ++V++A + R+ Y LE +++ D I G
Sbjct: 69 VRYFLHQHTIQLGQPATVKVAANLVRLISYNNKNMLETGLIVGGWDKYDGGKIYGIPLGG 128
Query: 126 DVLEPENGVMAIGSGGSYALS---AARALMSTQNSAEEIARKAMSIA 169
++E GSG SY A T++ AE++ KA+S+A
Sbjct: 129 TIIE--QPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEQLVVKAVSLA 173
>gi|297802906|ref|XP_002869337.1| hypothetical protein ARALYDRAFT_328593 [Arabidopsis lyrata subsp.
lyrata]
gi|297315173|gb|EFH45596.1| hypothetical protein ARALYDRAFT_328593 [Arabidopsis lyrata subsp.
lyrata]
Length = 234
Score = 47.4 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 30/178 (16%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L N+ +GS+AD+ + +
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQL-TDNVYVCRSGSAADSQVVSDY 70
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGDVLE-- 129
+ L Q+ QL + + K NL M+ +K L +I G D E
Sbjct: 71 VRYFLHQHTIQLGQPA--------TVKVSANLIRMLAYNNKQNMLQTGLIVGGWDKYEGG 122
Query: 130 -----P------ENGVMAIGSGGSYALS---AARALMSTQNSAEEIARKA--MSIAAD 171
P E GSG SY A T+ AE++ KA ++IA D
Sbjct: 123 KIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKENMTKEEAEQLVVKAVSLAIARD 180
>gi|154333595|ref|XP_001563054.1| proteasome beta-1 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060064|emb|CAM37377.1| putative proteasome beta-1 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 283
Score = 47.4 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTIL V G VV+A D + S G V+ + K+ +L K I +GS+AD L ER
Sbjct: 54 GTTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTK-KIYCCRSGSAADTQALAER 112
Query: 75 LEKKLEQYPNQL 86
+ L Y +
Sbjct: 113 VSNYLGSYQTDV 124
>gi|241959538|ref|XP_002422488.1| multicatalytic endopeptidase complex subunit, putative; proteasome
component precursor, putative [Candida dubliniensis
CD36]
gi|223645833|emb|CAX40496.1| multicatalytic endopeptidase complex subunit, putative [Candida
dubliniensis CD36]
Length = 272
Score = 47.4 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + VVIA D + + G V N K+ RL I AG++AD + +
Sbjct: 29 GTTIVGCKFKNGVVIAADTRATSGPIVADKNCEKLHRLAP-KIWCAGAGTAADTEMVTQL 87
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA 113
+ LE + R +++ + K + KY +L A +++A
Sbjct: 88 IASNLELHALSQNRQPRVIAALTMLKQ-HLFKYQGHLGAYLIVA 130
>gi|296129845|ref|YP_003637095.1| 20S proteasome A and B subunits [Cellulomonas flavigena DSM 20109]
gi|296021660|gb|ADG74896.1| 20S proteasome A and B subunits [Cellulomonas flavigena DSM 20109]
Length = 276
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ + +G VV+AGD + ++G + + KV G AG++ A L+
Sbjct: 49 HATTIVALAFEGGVVMAGDRRATMGSMIASRHIEKVFP-ADEFSAVGIAGTAGLAIELVR 107
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 108 LFQLELEHY 116
>gi|254567792|ref|XP_002491006.1| Endopeptidase with trypsin-like activity that cleaves after basic
residues [Pichia pastoris GS115]
gi|238030803|emb|CAY68726.1| Endopeptidase with trypsin-like activity that cleaves after basic
residues [Pichia pastoris GS115]
gi|328352462|emb|CCA38861.1| 20S proteasome subunit beta 2 [Pichia pastoris CBS 7435]
Length = 265
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ +G VVIA D + + G V N K+ RL I AG++AD + +
Sbjct: 29 GTTIVGVKFEGGVVIAADTRATSGPIVADKNCEKLHRLSP-TIWCAGAGTAADTEMVTQL 87
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 88 IGSNLELH 95
>gi|67470012|ref|XP_650977.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56467649|gb|EAL45591.1| proteasome beta subunit, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 213
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G V++ DG+ S+G V+ K+R + +I AG++A + T+ +
Sbjct: 14 GTTIIGVVYNGGVLLGADGRTSMGSIVVNRCKNKIR-MVSDSIGMCTAGTAAHSETIGDY 72
Query: 75 LEKKLEQYPNQ 85
++ L Y Q
Sbjct: 73 VKHALRMYTAQ 83
>gi|325118907|emb|CBZ54459.1| Proteasome subunit beta type-7, related [Neospora caninum
Liverpool]
Length = 242
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V G VV+ D + S G V+ ARK+ R+ + + +GS+AD + +
Sbjct: 42 GTTIVAVSFQGGVVLGADTRTSAGSYVVNRAARKISRVHERMCVC-RSGSAADTQAVTQI 100
Query: 75 LEKKLEQYPNQLLRSS---VELAKDWRMDKYLRNLEAM---ILIADKT-----ITLVITG 123
++ ++QY +L + VE A + ++ +A+ +++A I
Sbjct: 101 VKLYIQQYAQELPKGEEPRVEAAANVFQSLCYQHKDALTAGLIVAGYDKVKGGQIYAIPL 160
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIA 169
G ++ A GSG ++ + A TQ A E+ +K+++ A
Sbjct: 161 GGALMPM--NYTAGGSGSAFISAFMDANFKDNMTQQEAVELVKKSVAYA 207
>gi|257075968|ref|ZP_05570329.1| proteasome beta subunit [Ferroplasma acidarmanus fer1]
Length = 210
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
TT L + V++ D + ++G + NA+K+ ++ G IAG G DA L+
Sbjct: 7 GTTTLGITAGDYVIMGTDSRATMGNFISNKNAQKLYKIDTYAGMTIAGLVG---DAQVLV 63
Query: 73 ERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMIL-IADKT-ITLVITGM 124
+ ++E Y Q + ++ L+ KY + +++ DK I
Sbjct: 64 RYMRAEMELYRVQRKINMPIEAAATLLSNMLNQSKYYPYMVQLLVGGFDKKPHIFSIDAA 123
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIA 169
G +E + + GSG + A A +A KA+S+A
Sbjct: 124 GGSVE--DEYASTGSGSPFVYGVLEAEYQPNMKLDDAINLAIKAISVA 169
>gi|190359942|sp|A7KE01|PB6LA_SALSA RecName: Full=Proteasome subunit beta type-6-A like protein;
AltName: Full=Low molecular mass protein 2-delta-A;
Flags: Precursor
gi|146147390|gb|ABQ01993.1| PSMB9a-like [Salmo salar]
gi|148362164|gb|ABQ59686.1| PSMB9a-like protein [Salmo salar]
gi|209737398|gb|ACI69568.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 217
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 20/170 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
TTIL V +G V+I D + S+G + + +++ + +L I AGS ADA +
Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGSYV--SSKTINKLIQVHDRIFCCIAGSLADAQAVT 73
Query: 73 ERLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVIT 122
+ + ++ + Q L++++ + K+ + L+A + A D+ +
Sbjct: 74 KAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTVA 132
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G +L GSG +Y A A S EE A+ A+++A
Sbjct: 133 LGGMLL--SQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALA 180
>gi|90109362|pdb|2FHG|H Chain H, Crystal Structure Of Mycobacterial Tuberculosis
Proteasome
gi|90109364|pdb|2FHG|C Chain C, Crystal Structure Of Mycobacterial Tuberculosis
Proteasome
gi|90109366|pdb|2FHG|E Chain E, Crystal Structure Of Mycobacterial Tuberculosis
Proteasome
gi|90109368|pdb|2FHG|G Chain G, Crystal Structure Of Mycobacterial Tuberculosis
Proteasome
gi|90109370|pdb|2FHG|J Chain J, Crystal Structure Of Mycobacterial Tuberculosis
Proteasome
gi|90109372|pdb|2FHG|L Chain L, Crystal Structure Of Mycobacterial Tuberculosis
Proteasome
gi|90109374|pdb|2FHG|N Chain N, Crystal Structure Of Mycobacterial Tuberculosis
Proteasome
gi|90109376|pdb|2FHG|P Chain P, Crystal Structure Of Mycobacterial Tuberculosis
Proteasome
gi|90109378|pdb|2FHG|R Chain R, Crystal Structure Of Mycobacterial Tuberculosis
Proteasome
gi|90109380|pdb|2FHG|T Chain T, Crystal Structure Of Mycobacterial Tuberculosis
Proteasome
gi|90109382|pdb|2FHG|V Chain V, Crystal Structure Of Mycobacterial Tuberculosis
Proteasome
gi|90109384|pdb|2FHG|X Chain X, Crystal Structure Of Mycobacterial Tuberculosis
Proteasome
gi|90109386|pdb|2FHG|Z Chain Z, Crystal Structure Of Mycobacterial Tuberculosis
Proteasome
gi|90109388|pdb|2FHG|2 Chain 2, Crystal Structure Of Mycobacterial Tuberculosis
Proteasome
gi|90109390|pdb|2FHH|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With A Peptidyl Boronate
Inhibitor Mln-273
gi|90109392|pdb|2FHH|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With A Peptidyl Boronate
Inhibitor Mln-273
gi|90109394|pdb|2FHH|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With A Peptidyl Boronate
Inhibitor Mln-273
gi|90109396|pdb|2FHH|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With A Peptidyl Boronate
Inhibitor Mln-273
gi|90109398|pdb|2FHH|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With A Peptidyl Boronate
Inhibitor Mln-273
gi|90109400|pdb|2FHH|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With A Peptidyl Boronate
Inhibitor Mln-273
gi|90109402|pdb|2FHH|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With A Peptidyl Boronate
Inhibitor Mln-273
gi|90109404|pdb|2FHH|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With A Peptidyl Boronate
Inhibitor Mln-273
gi|90109406|pdb|2FHH|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With A Peptidyl Boronate
Inhibitor Mln-273
gi|90109408|pdb|2FHH|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With A Peptidyl Boronate
Inhibitor Mln-273
gi|90109410|pdb|2FHH|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With A Peptidyl Boronate
Inhibitor Mln-273
gi|90109412|pdb|2FHH|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With A Peptidyl Boronate
Inhibitor Mln-273
gi|90109414|pdb|2FHH|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With A Peptidyl Boronate
Inhibitor Mln-273
gi|90109416|pdb|2FHH|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With A Peptidyl Boronate
Inhibitor Mln-273
gi|258588506|pdb|3HFA|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant
gi|258588507|pdb|3HFA|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant
gi|258588508|pdb|3HFA|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant
gi|258588509|pdb|3HFA|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant
gi|258588510|pdb|3HFA|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant
gi|258588511|pdb|3HFA|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant
gi|258588512|pdb|3HFA|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant
gi|258588513|pdb|3HFA|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant
gi|258588514|pdb|3HFA|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant
gi|258588515|pdb|3HFA|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant
gi|258588516|pdb|3HFA|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant
gi|258588517|pdb|3HFA|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant
gi|258588518|pdb|3HFA|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant
gi|258588519|pdb|3HFA|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant
gi|299689167|pdb|3MFE|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant With H0 Movement
gi|299689174|pdb|3MFE|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant With H0 Movement
gi|299689210|pdb|3MI0|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome At 2.2 A
gi|299689212|pdb|3MI0|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome At 2.2 A
gi|299689214|pdb|3MI0|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome At 2.2 A
gi|299689215|pdb|3MI0|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome At 2.2 A
gi|299689217|pdb|3MI0|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome At 2.2 A
gi|299689219|pdb|3MI0|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome At 2.2 A
gi|299689221|pdb|3MI0|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome At 2.2 A
gi|299689223|pdb|3MI0|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome At 2.2 A
gi|299689225|pdb|3MI0|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome At 2.2 A
gi|299689227|pdb|3MI0|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome At 2.2 A
gi|299689229|pdb|3MI0|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome At 2.2 A
gi|299689231|pdb|3MI0|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome At 2.2 A
gi|299689233|pdb|3MI0|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome At 2.2 A
gi|299689235|pdb|3MI0|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome At 2.2 A
gi|307776450|pdb|3KRD|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With Fellutamide B
gi|307776452|pdb|3KRD|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With Fellutamide B
gi|307776454|pdb|3KRD|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With Fellutamide B
gi|307776455|pdb|3KRD|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With Fellutamide B
gi|307776457|pdb|3KRD|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With Fellutamide B
gi|307776459|pdb|3KRD|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With Fellutamide B
gi|307776461|pdb|3KRD|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With Fellutamide B
gi|307776463|pdb|3KRD|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With Fellutamide B
gi|307776465|pdb|3KRD|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With Fellutamide B
gi|307776467|pdb|3KRD|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With Fellutamide B
gi|307776469|pdb|3KRD|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With Fellutamide B
gi|307776471|pdb|3KRD|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With Fellutamide B
gi|307776473|pdb|3KRD|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With Fellutamide B
gi|307776475|pdb|3KRD|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome In Complex With Fellutamide B
Length = 240
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG--KGNIIAGFAGSSADAFTLLE 73
TTI+ ++ G VV+AGD + + G + + R VR++ G AG++A A
Sbjct: 1 TTIVALKYPGGVVMAGDRRSTQGNMI---SGRDVRKVYITDDYTATGIAGTAAVAVEFAR 57
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 58 LYAVELEHY 66
>gi|171687907|ref|XP_001908894.1| hypothetical protein [Podospora anserina S mat+]
gi|170943915|emb|CAP69567.1| unnamed protein product [Podospora anserina S mat+]
Length = 288
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ H +K+ H TT L R G +++A D + + G + +KV + +++ AG
Sbjct: 59 SNPHCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSDLLGTMAG 117
Query: 64 SSADAFTLLERLEKKLEQY 82
+AD L L + +
Sbjct: 118 GAADCQYWLAWLGMQCRLH 136
>gi|311742497|ref|ZP_07716306.1| proteasome, beta subunit [Aeromicrobium marinum DSM 15272]
gi|311314125|gb|EFQ84033.1| proteasome, beta subunit [Aeromicrobium marinum DSM 15272]
Length = 270
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ G VV+AGD + ++G + + + +KV + + + G AG++ A +
Sbjct: 41 HGTTIVAATFPGGVVMAGDRRATMGNVIAQRDIQKVFATDEYSCV-GIAGTAGIAVEMTR 99
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 100 LFRVELEHY 108
>gi|221508035|gb|EEE33622.1| proteasome component PRE3 precursor / proteasome subunit beta type
6 precursor, putative [Toxoplasma gondii VEG]
Length = 245
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V G VV+ D + S G V+ ARK+ R+ + I +GS+AD + +
Sbjct: 45 GTTIVAVSFKGGVVLGADTRTSAGSYVVNRAARKISRVHE-RICVCRSGSAADTQAVTQI 103
Query: 75 LEKKLEQYPNQLLR 88
++ ++QY +L +
Sbjct: 104 VKLYIQQYAQELPK 117
>gi|291395997|ref|XP_002714703.1| PREDICTED: proteasome beta 9 subunit [Oryctolagus cuniculus]
Length = 219
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
GD +A ++H TTI+ V DG VV+ D +VS GQ V+ K+ L + I +G
Sbjct: 9 GDLPWAGEVHTGTTIMAVEFDGGVVVGSDSRVSAGQAVVNRVFDKLSPLHQ-RIYCALSG 67
Query: 64 SSADAFTLLERLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKT 116
S+ADA + + +LE + + L+ ++ + ++ KY +L A +++A D+
Sbjct: 68 SAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVRN-ITYKYREDLSAHLMVAGWDQR 126
Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ G + + GSG +Y A S EE
Sbjct: 127 EGGQVYGTLEGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEE 170
>gi|207109038|ref|ZP_03243200.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
HPKX_438_CA4C1]
Length = 26
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 161 IARKAMSIAADICVYTNHNIVLETL 185
+ +++ IA D+C+YTN NI + L
Sbjct: 2 LVEESLKIAGDLCIYTNTNIKILEL 26
>gi|75491633|sp|Q53079|PSB1_RHOER RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PrcB 1; Flags: Precursor
gi|847769|gb|AAC45740.1| proteasome beta-type subunit 1 [Rhodococcus erythropolis]
Length = 294
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G V++AGD + + G + + KV + AG AG++ A L+
Sbjct: 64 HGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKV-YVTDEYSAAGIAGTAGIAIELVR 122
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 123 LFAVELEHY 131
>gi|322497326|emb|CBZ32401.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 283
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTIL V G VV+A D + S G V+ + K+ +L + I +GS+AD L ER
Sbjct: 54 GTTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTE-KIYCCRSGSAADTQALAER 112
Query: 75 LEKKLEQYPNQL 86
+ L Y +
Sbjct: 113 VSNYLGSYQTDI 124
>gi|237833495|ref|XP_002366045.1| proteasome component PRE3 precursor, putative [Toxoplasma gondii
ME49]
gi|211963709|gb|EEA98904.1| proteasome component PRE3 precursor, putative [Toxoplasma gondii
ME49]
gi|221486248|gb|EEE24509.1| proteasome component PRE3 precursor / proteasome subunit beta type
6 precursor, putative [Toxoplasma gondii GT1]
Length = 245
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V G VV+ D + S G V+ ARK+ R+ + I +GS+AD + +
Sbjct: 45 GTTIVAVSFKGGVVLGADTRTSAGSYVVNRAARKISRVHE-RICVCRSGSAADTQAVTQI 103
Query: 75 LEKKLEQYPNQLLR 88
++ ++QY +L +
Sbjct: 104 VKLYIQQYAQELPK 117
>gi|146079452|ref|XP_001463791.1| hypothetical protein [Leishmania infantum JPCM5]
gi|321399047|emb|CAM66312.2| putative proteasome beta-1 subunit [Leishmania infantum JPCM5]
Length = 283
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTIL V G VV+A D + S G V+ + K+ +L + I +GS+AD L ER
Sbjct: 54 GTTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTE-KIYCCRSGSAADTQALAER 112
Query: 75 LEKKLEQYPNQL 86
+ L Y +
Sbjct: 113 VSNYLGSYQTDI 124
>gi|157865801|ref|XP_001681607.1| proteasome beta-1 subunit [Leishmania major strain Friedlin]
gi|68124905|emb|CAJ02350.1| putative proteasome beta-1 subunit [Leishmania major strain
Friedlin]
Length = 283
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTIL V G VV+A D + S G V+ + K+ +L + I +GS+AD L ER
Sbjct: 54 GTTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTE-KIYCCRSGSAADTQALAER 112
Query: 75 LEKKLEQYPNQL 86
+ L Y +
Sbjct: 113 VSNYLGSYQTDI 124
>gi|56754849|gb|AAW25607.1| SJCHGC06118 protein [Schistosoma japonicum]
gi|226471392|emb|CAX70777.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
gi|226489366|emb|CAX75827.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
gi|226489368|emb|CAX75828.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
gi|226489370|emb|CAX75829.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
gi|226489372|emb|CAX75830.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
Length = 281
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V + N K+ R+ G AG++AD +
Sbjct: 38 GTTICGVVFKNGIVLGADTRATEGNIVAEKNCSKIHRIADNIYCCG-AGTAADTQMVTLM 96
Query: 75 LEKKLEQYPNQLLR 88
+ ++E + R
Sbjct: 97 ISSQVELHRLNTGR 110
>gi|68473123|ref|XP_719367.1| potential proteasome subunit [Candida albicans SC5314]
gi|46441180|gb|EAL00479.1| potential proteasome subunit [Candida albicans SC5314]
gi|238880392|gb|EEQ44030.1| proteasome component PUP1 precursor [Candida albicans WO-1]
Length = 272
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + VVIA D + + G V N K+ RL I AG++AD + +
Sbjct: 29 GTTIVGCKFKDGVVIAADTRATSGPIVADKNCEKLHRLAP-KIWCAGAGTAADTEMVTQL 87
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA 113
+ LE + R +++ + K + KY +L A +++A
Sbjct: 88 IASNLELHALSQNRQPRVIAALTMLKQ-HLFKYQGHLGAYLIVA 130
>gi|294877016|ref|XP_002767869.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase
fold, putative [Perkinsus marinus ATCC 50983]
gi|239869810|gb|EER00587.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase
fold, putative [Perkinsus marinus ATCC 50983]
Length = 212
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 26/164 (15%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ ++ VV+ D + S G V +RKV RL I +GS+AD L +
Sbjct: 54 GTTIMAMKFKDGVVLGADSRTSTGGYVANRVSRKVTRL-HDRIFVCRSGSAADTQFLSSK 112
Query: 75 LEKKLEQYPNQL-------LRSSVELAKDWRMDKYL-----RNLEAMILIADKTIT---- 118
++ L + N L ++++ L + L + L A +++A T
Sbjct: 113 VKYFLNAHANDLPLDRLPKVKTAANLM------RLLAYNNKQYLTAGLIVAGWDQTEGPQ 166
Query: 119 -LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
I G ++ + + GSG +Y L S E+
Sbjct: 167 VYSIPLGGTII--KQNIATGGSGSTYITGLVDHLYRPDMSTGEL 208
>gi|112491166|pdb|2H6J|H Chain H, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
(Casp Target)
gi|112491167|pdb|2H6J|I Chain I, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
(Casp Target)
gi|112491168|pdb|2H6J|J Chain J, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
(Casp Target)
gi|112491169|pdb|2H6J|K Chain K, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
(Casp Target)
gi|112491170|pdb|2H6J|L Chain L, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
(Casp Target)
gi|112491171|pdb|2H6J|M Chain M, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
(Casp Target)
gi|112491172|pdb|2H6J|N Chain N, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
(Casp Target)
Length = 294
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G V++AGD + + G + + KV + AG AG++ A L+
Sbjct: 64 HGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKV-YVTDEYSAAGIAGTAGIAIELVR 122
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 123 LFAVELEHY 131
>gi|226359996|ref|YP_002777774.1| 20S proteasome beta-type subunit [Rhodococcus opacus B4]
gi|302595781|sp|C1ASP7|PSB_RHOOB RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|226238481|dbj|BAH48829.1| 20S proteasome beta-type subunit [Rhodococcus opacus B4]
Length = 294
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G V++AGD + + G + + KV + AG AG++ A L+
Sbjct: 64 HGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKV-YVTDEYSAAGIAGTAGIAIELVR 122
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 123 LFAVELEHY 131
>gi|302595915|sp|Q0SIF9|PSB_RHOSR RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
Length = 294
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G V++AGD + + G + + KV + AG AG++ A L+
Sbjct: 64 HGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKV-YVTDEYSAAGIAGTAGIAIELVR 122
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 123 LFAVELEHY 131
>gi|189219292|ref|YP_001939933.1| 20S proteasome, alpha subunit [Methylacidiphilum infernorum V4]
gi|189186150|gb|ACD83335.1| 20S proteasome, alpha subunit [Methylacidiphilum infernorum V4]
Length = 277
Score = 46.6 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ +TTIL V++AGD + + G V+ A KV + + I+A AG+ A AF +
Sbjct: 55 IESTTILAFYYKEGVIVAGDRRATAGNLVIHERAEKVISIDRNTILA-VAGTPATAFEIA 113
Query: 73 ERLEKKLEQYP 83
L+ E Y
Sbjct: 114 RVLQHSFEFYR 124
>gi|145559628|gb|ABP73653.1| SalI [Salinispora tropica]
Length = 278
Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ G V++AGD + ++G + + K+ + GFAG+ + +
Sbjct: 43 HGTTIVAATFAGGVLLAGDRRTTMGNLIAGRDVDKL-TITDDYSAVGFAGTVGISIDMTR 101
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 102 LFVVELEHY 110
>gi|145593571|ref|YP_001157868.1| 20S proteasome, A and B subunits [Salinispora tropica CNB-440]
gi|302595708|sp|A4X3P0|PSB1_SALTO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PrcB 1; Flags: Precursor
gi|145302908|gb|ABP53490.1| 20S proteasome, A and B subunits [Salinispora tropica CNB-440]
Length = 282
Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ G V++AGD + ++G + + K+ + GFAG+ + +
Sbjct: 47 HGTTIVAATFAGGVLLAGDRRTTMGNLIAGRDVDKL-TITDDYSAVGFAGTVGISIDMTR 105
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 106 LFVVELEHY 114
>gi|217071334|gb|ACJ84027.1| unknown [Medicago truncatula]
Length = 232
Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 33/179 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L N+ +GS+AD+ + +
Sbjct: 13 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQL-TDNVYVCRSGSAADSQVVSDY 71
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT---LVITG-------- 123
+ L Q+ QL + + K NL ++ +K L++ G
Sbjct: 72 VRYFLHQHTIQLGQPA--------TVKVAANLVRLLAYNNKNNLQTGLIVGGWDKYEGGQ 123
Query: 124 ------MGDVLEPENGVMAIGSGGSYALS---AARALMSTQNSAEEIARKA--MSIAAD 171
G +++ GSG SY A T++ AE++ +KA ++IA D
Sbjct: 124 IYGVPLGGTIVQ--QPFAIGGSGSSYLYGFFDQAWKDGMTKDEAEDLVKKAVSLAIARD 180
>gi|71030968|ref|XP_765126.1| proteasome precursor [Theileria parva strain Muguga]
gi|68352082|gb|EAN32843.1| proteasome precursor, putative [Theileria parva]
Length = 279
Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ ++ + VV+ DG+ S GQ V ARK+ R+ NI +GS+AD+ TL
Sbjct: 51 GTTIIGMKFEDGVVLVADGRTSSGQIVANRVARKITRILP-NIFMLRSGSAADSQTLSTI 109
Query: 75 LEKKLEQYPNQLLRS 89
+ + QL +
Sbjct: 110 IRYHAQSLKQQLKPA 124
>gi|18977776|ref|NP_579133.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|25453238|sp|Q8U125|PSB2_PYRFU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18893519|gb|AAL81528.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
Length = 206
Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 14/189 (7%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H K+ TT + + VV+A D + SLG + N K+ ++ + IAG AG D
Sbjct: 3 HLKEKLKGTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAG-AGDVGD 61
Query: 68 AFTLLERLEKKLEQYPNQL-----LRS-SVELAKDWRMDKYLRNLEAMILIA--DKTITL 119
L+ L+ + Y + + +++ + LA KY L ++ +K
Sbjct: 62 ILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDEKPRLF 121
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYT 176
+ +G + E + A GSG +A S + + S + +A KA+++A V+T
Sbjct: 122 SVDMVGGITE--DNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFT 179
Query: 177 NHNIVLETL 185
+++ T+
Sbjct: 180 GDGLLVVTI 188
>gi|225429850|ref|XP_002283195.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 231
Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L I +GS+AD+ + +
Sbjct: 10 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYIC-RSGSAADSQIVSDY 68
Query: 75 LEKKLEQYPNQL-LRSSVELAKDW-RMDKYLRN--LEAMILIA--DK---TITLVITGMG 125
+ L Q+ QL ++V++A + R+ Y LE +++ DK I G
Sbjct: 69 VRYFLHQHTIQLGQPATVKVAANLVRLVSYNNKNMLETGLIVGGWDKYEGGKIYAIPLGG 128
Query: 126 DVLEPENGVMAIGSGGSYALS---AARALMSTQNSAEEIARKA--MSIAAD 171
++E GSG +Y A T++ AE++ KA ++IA D
Sbjct: 129 TIIE--QPFAIGGSGSTYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARD 177
>gi|296081796|emb|CBI20801.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L I +GS+AD+ + +
Sbjct: 2 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYIC-RSGSAADSQIVSDY 60
Query: 75 LEKKLEQYPNQL-LRSSVELAKDW-RMDKYLRN--LEAMILIA--DK---TITLVITGMG 125
+ L Q+ QL ++V++A + R+ Y LE +++ DK I G
Sbjct: 61 VRYFLHQHTIQLGQPATVKVAANLVRLVSYNNKNMLETGLIVGGWDKYEGGKIYAIPLGG 120
Query: 126 DVLEPENGVMAIGSGGSYALS---AARALMSTQNSAEEIARKA--MSIAAD 171
++E GSG +Y A T++ AE++ KA ++IA D
Sbjct: 121 TIIE--QPFAIGGSGSTYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARD 169
>gi|256084599|ref|XP_002578515.1| proteasome catalytic subunit 2 (T01 family) [Schistosoma mansoni]
gi|238663891|emb|CAZ34753.1| proteasome catalytic subunit 2 (T01 family) [Schistosoma mansoni]
Length = 281
Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G V + N K+ R+ + G AG++AD +
Sbjct: 38 GTTICGVVFKNGVVLGADTRATEGTVVAEKNCSKIHRISENIYCCG-AGTAADTQMVTLM 96
Query: 75 LEKKLEQYPNQLLR 88
+ ++E + R
Sbjct: 97 ISSQVELHSLNTGR 110
>gi|54025141|ref|YP_119383.1| putative proteasome subunit beta [Nocardia farcinica IFM 10152]
gi|81374566|sp|Q5YUX2|PSB_NOCFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|54016649|dbj|BAD58019.1| putative proteasome beta subunit [Nocardia farcinica IFM 10152]
Length = 288
Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ V G V+IAGD + + G + + KV + AG AG++ A L+
Sbjct: 56 HGTTIVAVSYRGGVLIAGDRRATQGNLLASRDMDKV-YITDTFSAAGIAGTAGMAVELVR 114
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 115 LFAVELEHY 123
>gi|257056206|ref|YP_003134038.1| proteasome endopeptidase complex, beta component [Saccharomonospora
viridis DSM 43017]
gi|302595783|sp|C7MWV7|PSB_SACVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|256586078|gb|ACU97211.1| proteasome endopeptidase complex, beta component [Saccharomonospora
viridis DSM 43017]
Length = 289
Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 21/173 (12%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ +G V+IAGD + + G T+ + KV + G AG++ A L+
Sbjct: 58 HGTTIVASTFNGGVLIAGDRRATTGNTIASRDLEKV-YVTDAYSAVGIAGTAGIALELVR 116
Query: 74 RLE------KKLEQYPNQLLRSSVELAKDWRM--DKYLRNLEAMILIA-----DKTI--- 117
+K+E L + +LA + D L L A++ + D
Sbjct: 117 LYTVELAHYEKIEGVSLSLDGKANKLANMVKGNLDGALAGL-AVLPLFVGYDIDADDPKR 175
Query: 118 ---TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
+ G E G AIGSG YA S+ + L + A+ R A+
Sbjct: 176 AGRIVSFDVTGGRYEENAGYHAIGSGAVYAKSSLKKLYDPEADADTAVRTAIE 228
>gi|307095116|gb|ADN29864.1| proteasome beta 2 subunit [Triatoma matogrossensis]
Length = 277
Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 67/187 (35%), Gaps = 36/187 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + V N K+ L K G AG++AD
Sbjct: 39 GTTIVGIIFKDGVILGADTRATEDTIVADKNCSKIHYLAKNMYCCG-AGTAADTEMTTLT 97
Query: 75 LEKKLEQYPNQLLRSS-VELAKDWRMDKYLRNL--------EAMILIA----DKTITLVI 121
+ +LE + R V A ++ L+ L A +++ D I
Sbjct: 98 IASQLELHRLNTGRVVPVRTA-----NRMLKQLLFRYQGYIGAALVLGGIDNDGPHLYTI 152
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAA-------- 170
G P ++GSG A+S + A+++ R A+ IA
Sbjct: 153 HPHGSTDNP--PYTSMGSGSLAAMSVLESQWHPDMEEEEAKQLVRNAI-IAGIFNDLGSG 209
Query: 171 ---DICV 174
DIC+
Sbjct: 210 SSCDICI 216
>gi|70606469|ref|YP_255339.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|121697373|sp|Q4JAY3|PSB1_SULAC RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|68567117|gb|AAY80046.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
Length = 195
Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 84/185 (45%), Gaps = 16/185 (8%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T + ++ VV+A + ++S G V+ +ARKV +L G AG D TL +
Sbjct: 7 TAIGIKTKDGVVLAAERRLSYGDFVLSKSARKVFKL--GRFGIAGAGIVGDIQTLTRIMN 64
Query: 77 KKL---EQYPNQLL--RSSVE-LAKDWRMDKYLRNLEAMI---LIADKTITLVITGMGDV 127
++ E Y ++ + R++ + L+ +K L + ++ + D ++ +G +
Sbjct: 65 VEIKYYEMYNSRKISARAAAKLLSVILYQNKVLPYISELLFGGVDEDGPKLFILDPIGSL 124
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
+E + A+GSG A+ A + + A+E+A K+M A + V + I +
Sbjct: 125 IE--DSYAAVGSGARVAIGVLEAEYNESLTSEAAKELAIKSMKSAVERDVMSGDGIDILI 182
Query: 185 LKVGD 189
+ +
Sbjct: 183 INKNN 187
>gi|29829354|ref|NP_823988.1| 20S proteasome beta-subunit [Streptomyces avermitilis MA-4680]
gi|81719802|sp|Q82JE3|PSB1_STRAW RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PrcB 1; Flags: Precursor
gi|29606461|dbj|BAC70523.1| putative 20S proteasome beta-subunit [Streptomyces avermitilis
MA-4680]
Length = 284
Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 61/164 (37%), Gaps = 19/164 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT+L + V+IAGD + ++G + + + KV FAG+ A +++
Sbjct: 53 HGTTVLALAYRDGVLIAGDRRATMGNLIAQRDLEKVHP-ADDYTAVAFAGTVGLALDMVK 111
Query: 74 RLE------KKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAM-------ILIADKTI- 117
+ +K+E P L + LA R + + ++ L + +
Sbjct: 112 LYQVELAHFEKVEGVPMTLRAKATRLAGMIRQNLGQAMQGLAVVPLLVGYDLAARAGEHG 171
Query: 118 -TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
G E + A GSG YA A + L S E
Sbjct: 172 RIFSFDVTGGPYE-KTDFHAEGSGSPYARGALKKLFHPGMSRRE 214
>gi|46105478|ref|XP_380543.1| hypothetical protein FG00367.1 [Gibberella zeae PH-1]
Length = 270
Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 21/168 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYISP-QIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TG 123
+ +LE + + R + + L K + +Y ++ A +++A T + G
Sbjct: 88 ISSQLELHSLSTGRKPRVVTCMTLLKQ-HLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
D L + +GSG A+S S EE A+ +A+D
Sbjct: 147 STDKL----PYVTMGSGSLAAMSVFETQWKPDLSQEE----AIKLASD 186
>gi|258653140|ref|YP_003202296.1| 20S proteasome subunit A and B [Nakamurella multipartita DSM 44233]
gi|302595776|sp|C8XAQ4|PSB_NAKMY RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|258556365|gb|ACV79307.1| 20S proteasome A and B subunits [Nakamurella multipartita DSM
44233]
Length = 288
Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + + VV+AGD + ++G + + + KV + + G AG++ A ++
Sbjct: 56 HGTTIVALTCEQGVVVAGDRRATMGNIIAQRDIEKV-FVADSHSAIGIAGTAGLAVEMVR 114
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 115 LFRLELEHY 123
>gi|239815155|ref|YP_002944065.1| 20S proteasome A and subunit betas [Variovorax paradoxus S110]
gi|239801732|gb|ACS18799.1| 20S proteasome A and B subunits [Variovorax paradoxus S110]
Length = 197
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-----KGNIIAGFAGSSADAFT 70
TT++ VRK G V +A D V+ G T + A +++ G + AG++A
Sbjct: 2 TTVVAVRKGGQVTMAADSLVTFGDTRLSHRAEANQKIFTVEDAAGQSLFAVAGAAAHFLV 61
Query: 71 LLERLEKKLEQ 81
L L + +
Sbjct: 62 LQHALAAQPRE 72
>gi|111017863|ref|YP_700835.1| proteasome beta subunit [Rhodococcus jostii RHA1]
gi|110817393|gb|ABG92677.1| proteasome beta subunit [Rhodococcus jostii RHA1]
Length = 239
Score = 45.8 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G V++AGD + + G + + KV + AG AG++ A L+
Sbjct: 9 HGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKV-YVTDEYSAAGIAGTAGIAIELVR 67
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 68 LFAVELEHY 76
>gi|256371704|ref|YP_003109528.1| 20S proteasome A and B subunits [Acidimicrobium ferrooxidans DSM
10331]
gi|302595816|sp|C7LYP7|PSB_ACIFD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|256008288|gb|ACU53855.1| 20S proteasome A and B subunits [Acidimicrobium ferrooxidans DSM
10331]
Length = 273
Score = 45.8 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI +R G VVIAGD + + G + KV G AG++ A ++
Sbjct: 49 HGTTIAALRFAGGVVIAGDRRATEGNFIANRTIEKVFP-ADRFSGVGIAGAAGPAVEMVR 107
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 108 IFQVQLEHY 116
>gi|14591201|ref|NP_143277.1| proteasome beta subunit precursor [Pyrococcus horikoshii OT3]
gi|17380245|sp|O50110|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
[Pyrococcus horikoshii OT3]
Length = 207
Score = 45.8 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 18/187 (9%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K TT + + VV+A D + SLG + N K+ ++ + IAG AG D L
Sbjct: 7 KFKGTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAG-AGDVGDILNL 65
Query: 72 LERL--EKKLEQYPNQLLRSSVE-----LAKDWRMDKYLRNLEAMILIA---DKTITLVI 121
+ L E KL Y R SV+ LA KY L A L+ +K +
Sbjct: 66 VRLLRAEAKLY-YSQSGKRMSVKALATLLANIMNGAKYFPYL-AWFLVGGYDEKPKLYSV 123
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNH 178
+G + E + GSG +A S + + EE +A KA++ A V++
Sbjct: 124 DMVGGITE--DKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGD 181
Query: 179 NIVLETL 185
I++ T+
Sbjct: 182 GILVVTI 188
>gi|302692828|ref|XP_003036093.1| hypothetical protein SCHCODRAFT_81440 [Schizophyllum commune H4-8]
gi|300109789|gb|EFJ01191.1| hypothetical protein SCHCODRAFT_81440 [Schizophyllum commune H4-8]
Length = 310
Score = 45.8 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 45/185 (24%), Positives = 70/185 (37%), Gaps = 26/185 (14%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
D + +K+ H TT L R G V++A D + + G V +KV + ++ A
Sbjct: 71 HADPNCRIKIQHGTTTLAFRFQGGVIVAVDSRATAGSYVASGTVKKVIEINPY-LLGTMA 129
Query: 63 GSSADAFTLLERLEKKLEQYP-NQLLRSSVELAKDWRMDKYLRNL-----------EAMI 110
G +AD L + R SV A KYL NL MI
Sbjct: 130 GGAADCQYWETYLGMHCRLHELRNRERISVSAAS-----KYLSNLVYSYKGMGLSMGTMI 184
Query: 111 LIADKT--ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKA 165
DKT + G L + + ++GSG ++A T A+E+ R++
Sbjct: 185 CGWDKTGPQIFYVDSDGTRL--KGDLFSVGSGSTFAYGVLDQGYRWDLTDAEAQELGRRS 242
Query: 166 MSIAA 170
+ A
Sbjct: 243 IYAAG 247
>gi|303391190|ref|XP_003073825.1| proteasome subunit beta type-6 [Encephalitozoon intestinalis ATCC
50506]
gi|303302973|gb|ADM12465.1| proteasome subunit beta type-6 [Encephalitozoon intestinalis ATCC
50506]
Length = 202
Score = 45.8 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+M TTI+ ++ D V+I D + S+G + K+ + + +GSSAD +
Sbjct: 6 EMTGTTIIAIKYDDGVLIGADSRTSMGAYIPSRVTDKLTPITNNIFVC-RSGSSADTQMI 64
Query: 72 LERLEKKLEQYPNQL-------LRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVI 121
E L+ L Y L R++ +K + L A +++A DK I
Sbjct: 65 SEYLKMYLTLYS-HLESSIPLVQRAATLASKIIYENPSLL---AGLIVAGYDDKPRIFNI 120
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ G ++E + GSG ++ S EE
Sbjct: 121 SLGGTLVECD--WAIGGSGSAFIYGYCDVNWKNGMSLEE 157
>gi|198456605|ref|XP_001360388.2| GA22086 [Drosophila pseudoobscura pseudoobscura]
gi|198135674|gb|EAL24963.2| GA22086 [Drosophila pseudoobscura pseudoobscura]
Length = 321
Score = 45.8 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 65/168 (38%), Gaps = 21/168 (12%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L R G VV+ D + + GQ + +K+ L ++ AG +AD
Sbjct: 70 HGTTTLGFRYQGGVVLCADSRATSGQYIGSQTMKKIVEL-NDYMLGTLAGGAADCVYWDR 128
Query: 74 RLEKKLEQYPNQLLRS-SVELAKDWRMDKYLRNLEA-----------MILIADKTITLVI 121
L + + + R SV+ A + + N+ A M+ D +I
Sbjct: 129 VLARDSRLHELRFKRRLSVDAAA-----RMIVNISAEYKGMGLVMGMMLAGYDDEGPKLI 183
Query: 122 TGMGDVLEPENGVMAIGSGGSYALS---AARALMSTQNSAEEIARKAM 166
+ + V A+GSG YAL T A ++AR+A+
Sbjct: 184 YVDSEGMRCHGNVFAVGSGSPYALGVLDTGHRFTMTDQEAFDLARRAI 231
>gi|209733156|gb|ACI67447.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 217
Score = 45.8 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 20/170 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
TTILTV +G V+I D + S+G + + +++ + +L I AGS ADA +
Sbjct: 16 GTTILTVTFNGGVIIGSDSRASIGGSYV--SSKTINKLIQVHDRIFCCIAGSLADAQAVT 73
Query: 73 ERLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVIT 122
+ + ++ + Q L++++ + K+ + L+A + A D+ +
Sbjct: 74 KAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTVA 132
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G +L GSG +Y A A S EE A+ A+++A
Sbjct: 133 LGGMLL--SQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALA 180
>gi|300786771|ref|YP_003767062.1| proteasome beta subunit [Amycolatopsis mediterranei U32]
gi|299796285|gb|ADJ46660.1| proteasome beta subunit [Amycolatopsis mediterranei U32]
Length = 284
Score = 45.8 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 65/184 (35%), Gaps = 32/184 (17%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ V+IAGD + + G + + KV IAG AG + + L
Sbjct: 52 HGTTIVACTFASGVLIAGDRRATSGNLIASRDIEKVHVTDEYSAVGIAGTAGLAVEMVRL 111
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDK----YLRNLE-AM-------------ILIA 113
E+ V L+ D + +K NLE AM +
Sbjct: 112 YAVELAHYEKIEG------VSLSLDGKTNKLAGMVKANLEMAMAGLAAIPLFVGYDLEAE 165
Query: 114 DKTI---TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
D + G E G IGSG +A SA + L A +A +A+
Sbjct: 166 DAKHAGRIVSYDAAGGRYEENGGYAGIGSGSLFAKSALKKLHDPDADVEGAVRVAVEALY 225
Query: 168 IAAD 171
AAD
Sbjct: 226 DAAD 229
>gi|72549155|ref|XP_843489.1| proteasome beta 2 subunit [Leishmania major strain Friedlin]
gi|323364006|emb|CBZ13012.1| putative proteasome beta 2 subunit [Leishmania major strain
Friedlin]
Length = 254
Score = 45.8 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 63/177 (35%), Gaps = 40/177 (22%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V VV+ D + + G V RK+ + + G AG+SAD +
Sbjct: 29 GTTIVGVVYKDGVVLGADTRATEGSIVADKCCRKIHYMAPNIMCCG-AGTSADTEAVTNM 87
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---------VITGMG 125
+ L + +E K R LEA+ L+ K ++ G
Sbjct: 88 VSSHLALHR-------LE------TGKQSRVLEALTLL--KRHLYRYQGHVSAALVLGGV 132
Query: 126 DV-------LEPEN-----GVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
DV + P + +GSG A++ A + A+E+ A+
Sbjct: 133 DVEGPFLATIAPHGSTDRLPFVTMGSGSIAAMAQLEAAYKDNMTCEEAKELVTSAIH 189
>gi|14520445|ref|NP_125920.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|74558522|sp|Q9V247|PSB1_PYRAB RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|5457660|emb|CAB49151.1| psmB proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 197
Score = 45.8 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 66/179 (36%), Gaps = 26/179 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + +R V++A D Q SL V N RK+ + I AGS D +
Sbjct: 6 GTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPI-TDRIAITTAGSVGDVQMIARI 64
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK--TITLVITGMGDVLEPE- 131
LE + Y R + + NL + IL +K + I G V EP
Sbjct: 65 LEAEARYYQFTWGRPM--------TTRAMANLLSNILNENKWFPYLVQIIIGGYVDEPTI 116
Query: 132 -----------NGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
+ A GSG +A++ A+E+A KA+ A VYT
Sbjct: 117 ANLDPLGGLIFDDYTATGSGTPFAIAILEEGYRKNLGIEKAKELAIKAVKAAGARDVYT 175
>gi|301118843|ref|XP_002907149.1| proteasome subunit beta type-6, putative [Phytophthora infestans
T30-4]
gi|262105661|gb|EEY63713.1| proteasome subunit beta type-6, putative [Phytophthora infestans
T30-4]
Length = 673
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 63/175 (36%), Gaps = 31/175 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ VR +G VV+ D + S G V + K+ L + +GS+AD L +
Sbjct: 475 GTSIIAVRFNGGVVLGADSRTSTGTYVANRVSDKLTPL-HDRLFCCRSGSAADTQALSDY 533
Query: 75 LEKKLEQYP------------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKT-----I 117
+ L + L RS KD L A I++A
Sbjct: 534 VRYYLSSHSVELGRLPKVGTAANLFRSLCYHNKD--------RLLAGIIVAGWDPVKGGQ 585
Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
I G ++E GSG +Y + + EE +KA++ A
Sbjct: 586 VFSIPIGGAMVE--QDFAIGGSGSTYIYGLVDSEYRPNMTKEECQRFVKKALAHA 638
>gi|209880259|ref|XP_002141569.1| proteasome subunit beta type 7-B precursor [Cryptosporidium muris
RN66]
gi|209557175|gb|EEA07220.1| proteasome subunit beta type 7-B precursor, putative
[Cryptosporidium muris RN66]
Length = 282
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V VV+ D + + G V + K+ RL AG AG++AD +
Sbjct: 42 GTTIVGVVCKECVVLGADTRATNGPIVADKDCDKIHRLADNIYAAG-AGTAADLDHVTSM 100
Query: 75 LEKKLEQYPNQLLR 88
+E KLE Q+ R
Sbjct: 101 IEGKLELLRLQMNR 114
>gi|124487727|gb|ABN11951.1| putative proteasome 2 subunit [Maconellicoccus hirsutus]
Length = 236
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 70/173 (40%), Gaps = 24/173 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V VV+ D + + V + K+ L K G AG++AD +
Sbjct: 38 GTTIVGVVYKDGVVLGADTRATEDTIVADKDCAKIHYLNKNMYCCG-AGTAADTVQVTSM 96
Query: 75 LEKKLEQYPNQLLR------SSVELAKDWRMDKYLRNLEAMILI--ADKTITLVIT---- 122
+ LE + R + L + + +Y ++ A ++I DKT + + +
Sbjct: 97 ISSNLELHRLNSGRTVPVVVACTMLKQM--LFRYQGHIGAALIIGGVDKTGSHLYSIHPH 154
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
G D L +GSG A++ + + A+E+ ++ IAA I
Sbjct: 155 GSSDKL----PYTTMGSGSLAAMAVFESKWKPDLTEEEAKELVKEG--IAAGI 201
>gi|302036324|ref|YP_003796646.1| putative proteasome subunit beta [Candidatus Nitrospira defluvii]
gi|300604388|emb|CBK40720.1| putative Proteasome, beta subunit [Candidatus Nitrospira defluvii]
Length = 257
Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
ATTIL ++ V++AGD + + G VM KV + + +++A AG A A+ ++
Sbjct: 33 ATTILALKYRDGVLVAGDRRATAGNMVMYDRTDKVLEIDRYSVMA-IAGVPATAYEMVRV 91
Query: 75 LEKKLEQYP 83
LE + Y
Sbjct: 92 LEHSFKYYR 100
>gi|190359943|sp|A7KII6|PB6LB_SALSA RecName: Full=Proteasome subunit beta type-6-B like protein;
AltName: Full=Low molecular mass protein 2-delta-B;
Flags: Precursor
gi|148362125|gb|ABQ59652.1| PSMB9b-like protein [Salmo salar]
gi|262189356|gb|ACY30374.1| PSMB9b-like protein [Salmo salar]
Length = 217
Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
TTIL V +G V+I D + S+G + + +++ + +L I AGS ADA +
Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGSYV--SSKTINKLIQVHDRIFCCIAGSLADAQAVT 73
Query: 73 ERLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVIT 122
+ + ++ + Q L++++ + K+ + L+A + A D+ +
Sbjct: 74 KAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTVA 132
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G +L GSG +Y A A S EE A A+++A
Sbjct: 133 LGGMLL--SQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALA 180
>gi|195343577|ref|XP_002038372.1| GM10658 [Drosophila sechellia]
gi|194133393|gb|EDW54909.1| GM10658 [Drosophila sechellia]
Length = 322
Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT++ + DG V+I + + ++G ++ RK+ L AG AG++ D L+E
Sbjct: 49 GTTVVGIVFDGGVIIGAESKAAMGSMILSKTIRKIVELQSNIFAAG-AGTARDTKALVEL 107
Query: 75 LEKKLEQYPNQ 85
+LE +
Sbjct: 108 TRAQLELHRMN 118
>gi|212224577|ref|YP_002307813.1| proteasome, beta subunit 2 [Thermococcus onnurineus NA1]
gi|302595811|sp|B6YXV3|PSB2_THEON RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|212009534|gb|ACJ16916.1| proteasome, beta subunit 2 [Thermococcus onnurineus NA1]
Length = 200
Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 65/173 (37%), Gaps = 26/173 (15%)
Query: 21 VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
++ +V+A D Q SLG V N RK+ + I AGS D L LE +
Sbjct: 13 IKAKDGIVLAADTQASLGHMVETLNIRKIIPI-TDRIAITTAGSVGDVQALARMLEAEAR 71
Query: 81 QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK--TITLVITGMGDVLEPE------- 131
Y K K + NL + IL +K + I G V EP
Sbjct: 72 YYQ-------FTWGKPMST-KAMANLLSNILNGNKWFPYLVQIILGGYVEEPTLANLDPL 123
Query: 132 -----NGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
+ A GSG +A++ S A+E+A +A+ A VYT
Sbjct: 124 GGLIFDDYTATGSGSPFAIAVLEDGYKKDMSIEEAKELAVRAVRTAGKRDVYT 176
>gi|283468185|emb|CAN84588.1| low molecular mass polyprotein 2 [Melanogrammus aeglefinus]
Length = 90
Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V DG VV+ D +VS G +V+ K+ L + I +GS+ADA T+ E +
Sbjct: 1 TTIMAVEFDGGVVLGSDSRVSAGASVVNRVMNKLSPLHE-RIYCALSGSAADAQTIAETV 59
Query: 76 EKKLEQYPNQL 86
+L+ + +L
Sbjct: 60 NYQLDVHSMEL 70
>gi|269795388|ref|YP_003314843.1| proteasome endopeptidase complex, beta component [Sanguibacter
keddieii DSM 10542]
gi|302595785|sp|D1BHT9|PSB_SANKS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|269097573|gb|ACZ22009.1| proteasome endopeptidase complex, beta component [Sanguibacter
keddieii DSM 10542]
Length = 285
Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 67/179 (37%), Gaps = 27/179 (15%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ DG VV+AGD + + G + KV G AG++ A L+
Sbjct: 49 HGTTIVAATFDGGVVVAGDRRATSGSMIAHREIEKV-FAADEFSAVGIAGTAGLALELVR 107
Query: 74 RLEKKLEQY---PNQLLR---SSVELAKDWRMDKYLRNLEAMI------------LIADK 115
+ +LE Y LL + L+ R + L AM L+ +
Sbjct: 108 LFQLELEHYEKIEGTLLSLDGKANRLSTMIRGNLGL----AMQGLAVVPLFAGFDLVERR 163
Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAAD 171
G E E ++GSG +A A + L AE R +A+ AAD
Sbjct: 164 GRIFSYDVTGGRYE-ELDHHSVGSGSVFARGALKKLWRPGLDAEAAVRVVVEALFDAAD 221
>gi|209737734|gb|ACI69736.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 212
Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
TTIL V +G V+I D + S+G + + +++ + +L I AGS ADA +
Sbjct: 11 GTTILAVTFNGGVIIGSDSRASIGGSYV--SSKTINKLIQVHDRIFCCIAGSLADAQAVT 68
Query: 73 ERLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVIT 122
+ + ++ + Q L++++ + K+ + L+A + A D+ +
Sbjct: 69 KAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTVA 127
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G +L GSG +Y A A S EE A A+++A
Sbjct: 128 LGGMLL--SQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALA 175
>gi|302527206|ref|ZP_07279548.1| proteasome endopeptidase complex beta subunit [Streptomyces sp.
AA4]
gi|302436101|gb|EFL07917.1| proteasome endopeptidase complex beta subunit [Streptomyces sp.
AA4]
Length = 287
Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 65/177 (36%), Gaps = 29/177 (16%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
H TTI+ V G V+IAGD + + G + + KV IAG AG + + L
Sbjct: 55 HGTTIVAVAFAGGVLIAGDRRATSGNLIASRDIEKVHVTDEYSAVGIAGTAGLAVEMVRL 114
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDK----YLRNLE-AM--ILIA----------- 113
E+ V L+ D + +K NLE AM + +
Sbjct: 115 YAVELAHYEKIEG------VSLSLDGKTNKLAGMVKANLEMAMAGLAVVPLFVGYDLEAE 168
Query: 114 DKTI---TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
D + G E G ++GSG +A S+ + L A+ R A+
Sbjct: 169 DAKHAGRIVSYDAAGGRYEEHAGYASVGSGSLFAKSSLKKLYDPDADADAAVRTALE 225
>gi|62531133|gb|AAH92728.1| Proteasome (prosome, macropain) subunit, beta type, 7 [Danio rerio]
gi|182891494|gb|AAI64627.1| Psmb7 protein [Danio rerio]
Length = 277
Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 63/177 (35%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + VV+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTICGIVYKDGVVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQI 101
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNLEAMILIADK--TITLVITG---MGD 126
+ LE + +L R + ++ L+ M+ LV+ G G
Sbjct: 102 ISSNLELHSLSTGRLPRVATA-------NRMLKQ---MLFRYQGYIGAALVLGGVDCTGP 151
Query: 127 ---VLEPENGV-----MAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
+ P + +GSG A++A A+ + R A IAA I
Sbjct: 152 HLYSIYPHGSTDKLPYVTMGSGSLAAMAAFEDRYRPDMEEEDAKSLVRDA--IAAGI 206
>gi|72389907|ref|XP_845248.1| proteasome beta-1 subunit [Trypanosoma brucei TREU927]
gi|4218582|emb|CAA10283.1| proteasome beta-1 subunit [Trypanosoma brucei rhodesiense]
gi|62359956|gb|AAX80381.1| proteasome beta-1 subunit, putative [Trypanosoma brucei]
gi|70801783|gb|AAZ11689.1| proteasome beta-1 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261328641|emb|CBH11619.1| proteasome beta-1 subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 282
Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V VV+A D + S G V+ + K+ +L K I +GS+AD L E+
Sbjct: 54 GTTIMAVSYKDGVVLAADSRTSTGAYVVNRASNKLTKLAK-RIYCCRSGSAADTQALAEQ 112
Query: 75 LEKKLEQYPNQL 86
LE Y +
Sbjct: 113 TANYLESYETDI 124
>gi|322495629|emb|CBZ30934.1| putative proteasome beta 2 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 254
Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 62/177 (35%), Gaps = 40/177 (22%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V VV+ D + + G V RK+ + + G AG+SAD +
Sbjct: 29 GTTIVGVVYKDGVVLGADTRATEGSIVADKCCRKIHYMAPNIMCCG-AGTSADTEAVTNM 87
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---------VITGMG 125
+ L + + K R LEA+ L+ K ++ G
Sbjct: 88 VSSHLALHR-------------FETGKQSRVLEALTLL--KRHLYRYQGHVSAALVLGGV 132
Query: 126 DV-------LEPEN-----GVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
DV + P + +GSG A++ A + A+E+ A+
Sbjct: 133 DVEGPFLATVAPHGSTDRLPFVTMGSGSIAAMAQLEAAYKDNMTCEEAKELVTSAIR 189
>gi|289617833|emb|CBI55410.1| unnamed protein product [Sordaria macrospora]
Length = 291
Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ +K+ H TT L R G +V+A D + + G + +KV + +++ AG
Sbjct: 58 ANPSCPIKIAHGTTTLAFRFQGGIVVATDSRATAGNWIASQTVKKVIEI-NSDLLGTMAG 116
Query: 64 SSADAFTLLERLEKKLEQY 82
+AD L L + +
Sbjct: 117 GAADCQYWLAWLGMQCRLH 135
>gi|291612858|ref|YP_003523015.1| 20S proteasome A and B subunits [Sideroxydans lithotrophicus ES-1]
gi|291582970|gb|ADE10628.1| 20S proteasome A and B subunits [Sideroxydans lithotrophicus ES-1]
Length = 188
Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 70/177 (39%), Gaps = 26/177 (14%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANA----RKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ VRK+G+ IA D + G T + A K+ R+G + G GS+A L
Sbjct: 2 TTIVAVRKNGIAAIAADTLTTFGNTRLHATQDASHDKILRIGDSYV--GVCGSAAHHLVL 59
Query: 72 LER---------------LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT 116
E + +P L K+ D Y + + LIA+
Sbjct: 60 SSLLAKTPDVQLNSKAAIFETFRKLHP-ILKEECFLNPKEDEEDPY-ESSQITALIANSH 117
Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS--IAAD 171
I M +V E AIGSG ++L A + + A EIAR + IA D
Sbjct: 118 GIFAIYSMREVFE-YTQYWAIGSGHEFSLGAMYQAYARSDDATEIARAGVEAGIAFD 173
>gi|169629258|ref|YP_001702907.1| proteasome (beta subunit) PrcB [Mycobacterium abscessus ATCC 19977]
gi|302595762|sp|B1MAI2|PSB_MYCA9 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|169241225|emb|CAM62253.1| Proteasome (beta subunit) PrcB [Mycobacterium abscessus]
Length = 292
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G V+IAGD + + G + + KV ++ G AG++A A
Sbjct: 53 HGTTIVALTYRGGVLIAGDRRATQGNYIANRDIDKV-QITDNYSATGIAGTAAIAVEFAR 111
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 112 LYAVELEHY 120
>gi|170088512|ref|XP_001875479.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164650679|gb|EDR14920.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 307
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 45/185 (24%), Positives = 70/185 (37%), Gaps = 26/185 (14%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
D + +K+ H TT L R G V++A D + + G V +KV + ++ A
Sbjct: 63 HADPNCRIKIQHGTTTLAFRFQGGVIVAVDSRATAGSYVASGTVKKVIEINPY-LLGTMA 121
Query: 63 GSSADAFTLLERLEKKLEQYP-NQLLRSSVELAKDWRMDKYLRNL-----------EAMI 110
G +AD L + R SV A KYL NL MI
Sbjct: 122 GGAADCQYWETYLGMHCRLHELRNRERISVSAAS-----KYLSNLVYSYKGMGLSMGTMI 176
Query: 111 LIADKT--ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKA 165
DKT + G L + + ++GSG ++A T A+E+ R++
Sbjct: 177 CGWDKTGPAVFYVDSDGTRL--KGDLFSVGSGSTFAYGVLDQGYRWDLTDAEAQELGRRS 234
Query: 166 MSIAA 170
+ A
Sbjct: 235 IYAAG 239
>gi|84998292|ref|XP_953867.1| proteasome subunit beta 7 [Theileria annulata]
gi|65304864|emb|CAI73189.1| proteasome subunit beta 7, putative [Theileria annulata]
Length = 271
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+A D + + G V N K+ ++ AG AG +AD
Sbjct: 40 GTTICGVMGRDSVVLAADTRATQGIIVADKNCSKLHKISDNIYCAG-AGVAADLEHTTLW 98
Query: 75 LEKKLEQYPNQLLRS 89
L +E + ++
Sbjct: 99 LANNIELHRLNTKKA 113
>gi|195134726|ref|XP_002011788.1| GI10892 [Drosophila mojavensis]
gi|193906911|gb|EDW05778.1| GI10892 [Drosophila mojavensis]
Length = 322
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 15/175 (8%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + G +++A D + S G + + RKV ++ K I+ AG +AD
Sbjct: 72 HGTTTLGFKYKGGIILAADSRASNGNFIASQSMRKVVQVHK-KILGTIAGGAADCVYWDR 130
Query: 74 RL--EKKLEQYPNQLLRSSVELAKDWRMDKY-LRNL---EAMILI---ADKTITLVITGM 124
L E +L + S +A+ Y LR L M+L D + + G
Sbjct: 131 VLTMECRLHELTYHRPLSVKSVARILSNIAYKLRGLGLSMGMMLAGYDFDGPRLVYVDGD 190
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYT 176
G +E + ++GSG +AL + EE +A +++ A + YT
Sbjct: 191 GSSVEGH--LFSVGSGCCFALGILDSYYKYDMEDEEAYCLAMRSIYHATYLDSYT 243
>gi|194885021|ref|XP_001976373.1| GG20051 [Drosophila erecta]
gi|190659560|gb|EDV56773.1| GG20051 [Drosophila erecta]
Length = 390
Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 25/170 (14%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + G V++ D + + GQ + RK+ L ++ AG +AD
Sbjct: 70 HGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVEL-NDYMLGTLAGGAADCVYWDR 128
Query: 74 RLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEA-----------MILIADKTITL 119
L K+ + QL R +V+ A + + N+ M+ D
Sbjct: 129 VLAKECRLH--QLRYRKRMTVDTAA-----RIICNISTEYKGMGLVMGMMLAGFDDEGPK 181
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
+I + + V ++GSG YAL S A ++AR+A+
Sbjct: 182 LIYVDSEGMRSHGQVFSVGSGSPYALGVLDTGYRHDLSDQEAYDLARRAI 231
>gi|255625747|gb|ACU13218.1| unknown [Glycine max]
Length = 233
Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 29/177 (16%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L N+ +GS+AD+ + +
Sbjct: 14 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQL-TDNVYVCRSGSAADSQIVSDY 72
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT--ITLVITGMGDVLE--- 129
+ L Q+ QL + + K NL ++ +K T +I G D E
Sbjct: 73 VRYFLHQHTIQLGQPA--------TVKVAANLVRLLAYNNKNFLQTGLIVGGWDKYEGGQ 124
Query: 130 ----PENG------VMAIGSGGSYALS---AARALMSTQNSAEEIARKA--MSIAAD 171
P G GSG SY A T++ AE++ +KA ++IA D
Sbjct: 125 IYGVPLGGTTVQQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEDLVKKAVSLAIARD 181
>gi|298708558|emb|CBJ30643.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 218
Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG V++ D + S G V + K+ L +I A +GS+AD + +
Sbjct: 20 GTTIMAVQYDGGVIMGADSRTSTGTYVANRVSDKITSL-HDHIYACRSGSAADTQAITDY 78
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
+ L + +L R ++ ++A+ + R L MI+ D I G
Sbjct: 79 VRYFLASHSVELGRLPLVKTAAKMARGLCYNNKDRLLAGMIIAGWDPVDGGTVYEIPLGG 138
Query: 126 DVLEPENGVMAIGSGGSYALS---AARALMSTQNSAEEIARKAMSIA 169
++ + GSG +Y AA T+ A++ RKA+S A
Sbjct: 139 TMM--KQKFAIGGSGSTYIYGHVDAAFKENMTKEEAQQFVRKAISHA 183
>gi|189310927|gb|ACD87645.1| 20S proteasome B2 subunit [Anastrepha suspensa]
Length = 280
Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 36/187 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + V++ D + + G V N K+ L K G AG++AD +
Sbjct: 39 GTTIAGIIFKDGVILGADTRATEGPIVSDKNCSKIHYLAKNMYCCG-AGTAADTEMTTDL 97
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGDV 127
+ +LE + R ++ L K + + +Y ++ A +++ DKT + +
Sbjct: 98 IASQLEMHRLNTGRQVPVVAANTLLKQF-LFRYQGHISAALVLGGVDKTGSYIY-----C 151
Query: 128 LEPENGV-----MAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAA--------- 170
+ P +GSG A+S + + + EE + R A IAA
Sbjct: 152 IHPHGSTDRLPYATMGSGSLAAMSVFESRWTPDMTEEEGKLLVRDA--IAAGVFNDLGSG 209
Query: 171 ---DICV 174
D+CV
Sbjct: 210 SNIDLCV 216
>gi|254172363|ref|ZP_04879038.1| proteasome subunit beta [Thermococcus sp. AM4]
gi|214033292|gb|EEB74119.1| proteasome subunit beta [Thermococcus sp. AM4]
Length = 201
Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 46/188 (24%), Positives = 74/188 (39%), Gaps = 14/188 (7%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
M TT + V VV+A D + +LG V KV ++ IAG AG D
Sbjct: 4 SPSAMKGTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQVDDHLAIAG-AGLVGDI 62
Query: 69 FTLLERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA-D-KTITLV 120
+L+ L + + Y ++ R + ++ +YL ++ D +
Sbjct: 63 LSLVRLLRAEAKLYRARVGREMSVKAMATLVSNVLHGSRYLPYFAWFLIGGYDVRPRLYS 122
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
I G V E +A GSG +AL+ S EE +A +A+ A VYT
Sbjct: 123 IDAAGGVTE--ERFIAAGSGMEFALALLEENFSDGMDLEEGVDLAVRAVKAAMRRDVYTG 180
Query: 178 HNIVLETL 185
+ + T+
Sbjct: 181 EGVTVVTI 188
>gi|300122116|emb|CBK22690.2| unnamed protein product [Blastocystis hominis]
Length = 273
Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 6 DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
D H VK TT L + G V+++ D + + GQ + + KV + ++ AG
Sbjct: 56 DSHQMVKFCKGTTTLAFKFQGGVIVSVDSRATQGQFIASNSVHKVIEINP-FLLGTMAGG 114
Query: 65 SADAFTLLERL--EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADK 115
+AD + R+ E +L + R SV A D +L + + MI DK
Sbjct: 115 AADCYFWERRMGVEARLYELR-NGERISVAAASKILSD-FLYHYKDYGLSVGTMICGWDK 172
Query: 116 T--ITLVITGMGDVLEPEN--GVMAIGSGGSYALSAARALMS---TQNSAEEIARKAM 166
T + G L+ + ++GSG SYA + L T + A ++ R+A+
Sbjct: 173 TGPQIFYVDNDGTRLKADEKRSYFSVGSGSSYAYAVLDQLYHYDMTDDEAIDLGRRAI 230
>gi|299470598|emb|CBN80220.1| proteasome subunit beta type 6 [Ectocarpus siliculosus]
Length = 241
Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
ATT++ R DG VVI D + S G V + K+ + G +A +GSSAD +
Sbjct: 22 ATTLVAARFDGGVVIGADSRTSQGSFVANSGTDKITPVSPGVFLA-RSGSSADTQFVAGV 80
Query: 75 LEKKLEQYPNQLLR 88
+E KLE Y + R
Sbjct: 81 IEAKLEAYRTEFGR 94
>gi|297155620|gb|ADI05332.1| proteasome subunit beta [Streptomyces bingchenggensis BCW-1]
Length = 281
Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 25/178 (14%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT++ V++AGD +V++G + KV + + IA AG++ A L++
Sbjct: 52 HGTTVIAATYADGVLVAGDRRVTMGNLIAHREYEKVFPADEHSAIA-IAGTAGLAVELVK 110
Query: 74 RLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLRN-----LEAMILI-----------ADKT 116
L+ +LE Y ++ +++ L K R+ K +R+ ++ M ++ +
Sbjct: 111 LLQLELEHYE-KIEGTALSLDGKANRLTKMVRDNLSMAMQGMAVVPLFAGYDVHKGVGRV 169
Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAAD 171
+ +TG E G GSG +A + + L +I +A+ AAD
Sbjct: 170 FSYDVTGNR---TEERGFATTGSGSVHARGSLKKLYREGMPERDIVTAVVQALYDAAD 224
>gi|196231444|ref|ZP_03130302.1| 20S proteasome A and B subunits [Chthoniobacter flavus Ellin428]
gi|196224297|gb|EDY18809.1| 20S proteasome A and B subunits [Chthoniobacter flavus Ellin428]
Length = 269
Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
V+ ATTIL + G V++AGD + + G +++ A KV + +++A AG A A+
Sbjct: 43 GVQTQATTILAFKFAGGVLVAGDRRATAGNSIVYDRADKVLEIDSHSLMA-IAGVPATAW 101
Query: 70 TLLERLEKKLEQY-PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
+ LE + Y +QL S+E + A+ + ++ V+ G+G V+
Sbjct: 102 EMARVLEHSFQFYRRSQLQEMSLE-----------GKVRALSKLLRDNLSFVLQGVGVVV 150
>gi|297527496|ref|YP_003669520.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
gi|297256412|gb|ADI32621.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
Length = 215
Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T+L ++ + +VIAG+ +++ V+ N RKV + K ++ GFAG DA ++ L
Sbjct: 21 TVLGIKANNGIVIAGEKRLTYDGYVLSKNTRKVHPITK-HVGIGFAGLVGDAQFIIRALR 79
Query: 77 KKLEQYPNQLLR 88
+ E Y QL R
Sbjct: 80 LEAENYKLQLER 91
>gi|313126409|ref|YP_004036679.1| proteasome endopeptidase complex, beta component [Halogeometricum
borinquense DSM 11551]
gi|312292774|gb|ADQ67234.1| proteasome endopeptidase complex, beta component [Halogeometricum
borinquense DSM 11551]
Length = 243
Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 69/179 (38%), Gaps = 37/179 (20%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + ++ + VV+A D + SLG V N +KV + + AGS + A +L+
Sbjct: 49 GTTTVGLKTEDGVVLATDMRASLGHMVSSKNVQKVEEIHPTGALT-IAGSVSAAQSLIRS 107
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRM-DKYLRNLEAMI----------LI------ADKT- 116
+R+ V L + R D ++ L ++ ++ D
Sbjct: 108 ------------IRAEVRLYESRRGEDMSMQALSTLLGNFLRSGAFYIVQPILGGFDDEG 155
Query: 117 -ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
I G +LE E V GSG YAL S S A+ A +A+ A +
Sbjct: 156 AHIYSIDPAGSILEEEYTV--TGSGSQYALGVLEQEYSNDLSIEEAKTTAARAIKSAVE 212
>gi|194898667|ref|XP_001978889.1| GG11178 [Drosophila erecta]
gi|190650592|gb|EDV47847.1| GG11178 [Drosophila erecta]
Length = 322
Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG V+I + + + + +RK+ +L + NI AG AG + D L++
Sbjct: 49 GTTIVGIVFDGGVIIGAESRATSANIIPSNRSRKISQL-QTNIFAGGAGVAGDTTALMQL 107
Query: 75 LEKKLEQYPNQ--LLRSSVELAKDWRMDKYLRNL 106
+ +LE + R V A ++ +R L
Sbjct: 108 MRAQLELHRMNTGFRRVPVRCA-----NQMMRQL 136
>gi|296411495|ref|XP_002835466.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629250|emb|CAZ79623.1| unnamed protein product [Tuber melanosporum]
Length = 282
Score = 44.7 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ +K+ H TT L R G +++A D + + G + +KV + ++ AG
Sbjct: 57 SNPDCPIKLAHGTTTLAFRFQGGIIVATDSRATQGSWISSQTVKKVIEI-NDKMLGTMAG 115
Query: 64 SSADA 68
+AD
Sbjct: 116 GAADC 120
>gi|225718008|gb|ACO14850.1| Proteasome subunit beta type-7 precursor [Caligus clemensi]
Length = 279
Score = 44.7 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 59/163 (36%), Gaps = 22/163 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + VV D + + G V K+ +L I G AG+SAD + +
Sbjct: 41 GTTICALIYRDGVVYGADTRSTGGDMVADKAVHKIHQLAPNIIACG-AGTSADCDKVTQL 99
Query: 75 LEKKLEQYPNQLLR-SSVELAKDWRMDKYL-RNL-------EAMILI----ADKTITLVI 121
+ +L+ + + R S V A DK L + L A +L+ D +
Sbjct: 100 IASQLKLHRPETGRQSRVATA-----DKLLTQRLFQYQGYISAYLLVGGVDVDGPHLYSL 154
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
G+ + G A +N AEE A++
Sbjct: 155 GAHGNT---SPKLFTATGSGMLGAMAELETRYKENMAEEEAKE 194
>gi|195120908|ref|XP_002004963.1| GI19318 [Drosophila mojavensis]
gi|193910031|gb|EDW08898.1| GI19318 [Drosophila mojavensis]
Length = 224
Score = 44.7 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 23/171 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTIL DG VV+ D + S V A K+ R+ +I +GS+A TL E
Sbjct: 9 GTTILAAEFDGGVVLGADTRTSCRTYVSNRTADKLTRI-TDHIYCCRSGSAAQTQTLAES 67
Query: 75 LEKKLEQYPNQ-----LLR-SSVELAKDWRMDKYLRNLEAMILIADKTITL-------VI 121
+ L + N L+R ++V+ + L L A I++A L I
Sbjct: 68 VGSSLCGFQNVSNASCLVRDAAVQFRNKIYSTRKL--LLASIIVAGWDRALGGQVYTVPI 125
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIA 169
+G +L PE MA GSG SY A A ++ ++A+ +A
Sbjct: 126 SG---LLVPERYAMA-GSGSSYIQGFMAAHFKPGLNQEDAVDVVKRAIRLA 172
>gi|121604685|ref|YP_982014.1| 20S proteasome subunits A/B [Polaromonas naphthalenivorans CJ2]
gi|120593654|gb|ABM37093.1| 20S proteasome, A and B subunits [Polaromonas naphthalenivorans
CJ2]
Length = 196
Score = 44.7 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 39/194 (20%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM----KANAR--KVRRLGKGNIIAGFAGSSADAF 69
TT++ V+K G V IA D V+ G T + +AN++ KV G + G AG+ A
Sbjct: 2 TTLVVVKKAGQVAIAADTLVTFGDTCLTQRFEANSKIFKVET-PDGESLIGMAGTVAHFP 60
Query: 70 TL-----------------LERLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLRNLEAMIL 111
L E + L+ +P LL+ S L +K+ D Y + + +L
Sbjct: 61 VLRKAMATLPKEQLKLGSREEVFDTFLKLHP--LLKESFFLQSKEDDNDPY-ESSQFTVL 117
Query: 112 IADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA-- 169
IA+ + + +V E + +GSG S+AL A A +A E+A ++ A
Sbjct: 118 IANASGIYGLYSYREVFEFKE-FWGVGSGRSFALGAMHASWGKARTAREVAMAGLN-AGC 175
Query: 170 -------ADICVYT 176
I V+T
Sbjct: 176 EFDKNSGGPIDVFT 189
>gi|331697108|ref|YP_004333347.1| proteasome subunit beta [Pseudonocardia dioxanivorans CB1190]
gi|326951797|gb|AEA25494.1| proteasome, beta subunit [Pseudonocardia dioxanivorans CB1190]
Length = 287
Score = 44.7 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + VVIAGD + + G + + + KV + G AGS+ A ++
Sbjct: 59 HGTTIVALVCADGVVIAGDRRATAGNVIAQRDIEKV-FVTDSYSAVGIAGSAGIALEMVR 117
Query: 74 RLEKKLEQY 82
LE Y
Sbjct: 118 LFTVDLEHY 126
>gi|195489076|ref|XP_002092584.1| GE11586 [Drosophila yakuba]
gi|194178685|gb|EDW92296.1| GE11586 [Drosophila yakuba]
Length = 315
Score = 44.7 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 25/170 (14%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + G V++ D + + GQ + RK+ L ++ AG +AD
Sbjct: 70 HGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVEL-NDYMLGTLAGGAADCVYWDR 128
Query: 74 RLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEA-----------MILIADKTITL 119
L K+ + QL R +V+ A + + N+ M+ D
Sbjct: 129 VLAKECRLH--QLRYRKRMTVDTAA-----RIICNISTEYKGMGLVMGMMLAGFDDEGPK 181
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
+I D + V ++GSG YAL S A ++AR+A+
Sbjct: 182 LIYVDSDGMRSHGLVFSVGSGSPYALGVLDTGYRHDLSDQEAYDLARRAI 231
>gi|59275970|dbj|BAD89556.1| proteasome subunit [Oncorhynchus mykiss]
Length = 212
Score = 44.7 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 20/170 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
TTIL V +G V+I D + S+G + +++ + +L I AGS ADA +
Sbjct: 11 GTTILAVTFNGGVIIGSDSRASIGGNYV--SSKTINKLIQVHDRIFCCIAGSLADAQAVT 68
Query: 73 ERLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVIT 122
+ + ++ + Q L++++ + K+ + L+A + A D+ +
Sbjct: 69 KAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTVA 127
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G +L GSG +Y A A S EE A A+++A
Sbjct: 128 LGGMLL--SQPFTIGGSGSTYIYGYADAKYKPDMSREECLQFATNALALA 175
>gi|255083098|ref|XP_002504535.1| predicted protein [Micromonas sp. RCC299]
gi|226519803|gb|ACO65793.1| predicted protein [Micromonas sp. RCC299]
Length = 298
Score = 44.3 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 43/201 (21%), Positives = 72/201 (35%), Gaps = 52/201 (25%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V G VV+ D + + G+TV N K+ + G AG++AD +
Sbjct: 48 GTTITGVCFKGGVVLGADTRSTNGETVADKNCEKIHYIAPNIYCCG-AGTAADTEAVTGM 106
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---------VITGMG 125
+ LE + LA R + + L M+ K+ ++ G
Sbjct: 107 IASALELHR---------LATK-RKSRVVTAL-TML----KSHLFKYQGHVGAALVLGGV 151
Query: 126 DV-------LEPEN-----GVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAA 170
D+ + P +GSG A++ A T+ A+EI +++ A
Sbjct: 152 DINGPHLFSVHPHGSSDSLPFATMGSGSLAAMAVFEADFKEDMTEEEAKEIVARSIR-AG 210
Query: 171 -----------DICVYTNHNI 180
D+CV T +
Sbjct: 211 IFNDLGSGSNVDLCVITADKV 231
>gi|303278464|ref|XP_003058525.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459685|gb|EEH56980.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 220
Score = 44.3 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 42/205 (20%), Positives = 80/205 (39%), Gaps = 29/205 (14%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + T+L V + VV A D ++S G +V+ + +K+ ++ + ++A AG
Sbjct: 1 MRQNWSPYDNNGGTVLAVAGEDYVVCAADTRMSTGYSVLTRDYKKIEKMTEKCVMAS-AG 59
Query: 64 SSADAFTLLERLEKKLEQY--PNQLLRSSVELAKDWRMDKYLRNL---EAMILIA--DKT 116
ADA TL + L+ + Y N V A+ Y R ++A DK
Sbjct: 60 FMADAVTLKKTLKARCVSYEFQNNKEMGCVSFAQMLSNTLYYRRFFPYYTFNIVAGLDKE 119
Query: 117 ----------------ITLVITGMGD-VLEP--ENGVMAIGSGGSYALSAARALMSTQNS 157
G G ++ P +N + + A S+A L ++
Sbjct: 120 GKGAVFTYDAVGSYERTNYSCQGSGQGLIMPVLDNQLKTVSPLVLPAQSSATPLSESE-- 177
Query: 158 AEEIARKAMSIAADICVYTNHNIVL 182
A ++ + + A + +YT ++ +
Sbjct: 178 AVDLVKDCFATAGERDIYTGDSVEI 202
>gi|126465830|ref|YP_001040939.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
gi|302595722|sp|A3DN21|PSB1_STAMF RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126014653|gb|ABN70031.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 213
Score = 44.3 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T+L ++ VVIAG+ +++ V+ N RKV + K ++ GFAG DA ++ L
Sbjct: 19 TVLGIKAVNGVVIAGEKRLTYDGYVLSKNTRKVHPITK-HVGIGFAGLVGDAQFIIRALR 77
Query: 77 KKLEQYPNQLLRS--SVELAKDWRMDKYLRNLEAMI--LI---ADKT--ITLVITGMGDV 127
+ E Y QL R LAK + Y L ++ ++ D+ V+ +G +
Sbjct: 78 MEAENYELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDEKGPQIYVLDPVGSL 137
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
+E + +A+GSGG AL +E A K
Sbjct: 138 IE--DKYVALGSGGPIALGIIEKEYREDIDVDE-AEK 171
>gi|18976531|ref|NP_577888.1| multicatalytic endopeptidase complex beta subunit [Pyrococcus
furiosus DSM 3638]
gi|74552258|sp|Q8U4C9|PSB1_PYRFU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18892084|gb|AAL80283.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
Length = 196
Score = 44.3 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 67/179 (37%), Gaps = 26/179 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + ++ VV+A D Q SL V N +K+ + I AGS D L
Sbjct: 6 GTTTVGIKVKDGVVLAADTQASLDHMVETLNIKKIIPI-TDRIAITTAGSVGDVQMLARY 64
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK--TITLVITGMGDVLEPE- 131
LE + Y R K + NL + IL ++ + I G V EP
Sbjct: 65 LEAEARYYYFTWGRPM--------TTKAMANLLSNILNENRWFPYLVQIIIGGYVDEPTI 116
Query: 132 -----------NGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
+ A GSG +A++ + A+E+A +A+ A VYT
Sbjct: 117 ANLDPFGGLIFDDYTATGSGTPFAIAVLEEGYREDLTIEEAKELAIRAVRAAGRRDVYT 175
>gi|258588387|pdb|3H6F|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Ht1171
gi|258588389|pdb|3H6F|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Ht1171
gi|258588391|pdb|3H6F|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Ht1171
gi|258588392|pdb|3H6F|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Ht1171
gi|258588394|pdb|3H6F|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Ht1171
gi|258588396|pdb|3H6F|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Ht1171
gi|258588398|pdb|3H6F|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Ht1171
gi|258588400|pdb|3H6F|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Ht1171
gi|258588402|pdb|3H6F|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Ht1171
gi|258588404|pdb|3H6F|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Ht1171
gi|258588406|pdb|3H6F|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Ht1171
gi|258588408|pdb|3H6F|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Ht1171
gi|258588410|pdb|3H6F|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Ht1171
gi|258588412|pdb|3H6F|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Ht1171
gi|258588415|pdb|3H6I|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Gl1
gi|258588417|pdb|3H6I|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Gl1
gi|258588419|pdb|3H6I|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Gl1
gi|258588420|pdb|3H6I|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Gl1
gi|258588422|pdb|3H6I|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Gl1
gi|258588424|pdb|3H6I|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Gl1
gi|258588426|pdb|3H6I|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Gl1
gi|258588428|pdb|3H6I|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Gl1
gi|258588430|pdb|3H6I|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Gl1
gi|258588432|pdb|3H6I|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Gl1
gi|258588434|pdb|3H6I|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Gl1
gi|258588436|pdb|3H6I|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Gl1
gi|258588438|pdb|3H6I|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Gl1
gi|258588440|pdb|3H6I|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Modified By Inhibitor Gl1
gi|258588478|pdb|3HF9|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588479|pdb|3HF9|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588480|pdb|3HF9|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588481|pdb|3HF9|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588482|pdb|3HF9|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588483|pdb|3HF9|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588484|pdb|3HF9|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588485|pdb|3HF9|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588486|pdb|3HF9|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588487|pdb|3HF9|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588488|pdb|3HF9|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588489|pdb|3HF9|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588490|pdb|3HF9|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588491|pdb|3HF9|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588492|pdb|3HF9|HH Chain h, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588493|pdb|3HF9|CC Chain c, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588494|pdb|3HF9|EE Chain e, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588495|pdb|3HF9|GG Chain g, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588496|pdb|3HF9|JJ Chain j, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588497|pdb|3HF9|LL Chain l, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588498|pdb|3HF9|NN Chain n, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588499|pdb|3HF9|PP Chain p, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588500|pdb|3HF9|RR Chain r, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588501|pdb|3HF9|TT Chain t, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588502|pdb|3HF9|VV Chain v, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588503|pdb|3HF9|XX Chain x, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588504|pdb|3HF9|ZZ Chain z, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|258588505|pdb|3HF9|4 Chain 4, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant Modified By Inhibitor Gl1
gi|299689164|pdb|3MFE|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant With H0 Movement
gi|299689165|pdb|3MFE|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant With H0 Movement
gi|299689166|pdb|3MFE|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant With H0 Movement
gi|299689168|pdb|3MFE|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant With H0 Movement
gi|299689169|pdb|3MFE|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant With H0 Movement
gi|299689170|pdb|3MFE|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant With H0 Movement
gi|299689171|pdb|3MFE|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant With H0 Movement
gi|299689172|pdb|3MFE|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant With H0 Movement
gi|299689173|pdb|3MFE|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant With H0 Movement
gi|299689175|pdb|3MFE|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant With H0 Movement
gi|299689176|pdb|3MFE|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant With H0 Movement
gi|299689177|pdb|3MFE|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis
Proteasome Open-Gate Mutant With H0 Movement
Length = 240
Score = 44.3 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG--KGNIIAGFAGSSADAFTLLER 74
TI+ ++ G VV+AGD + + G + + R VR++ G AG++A A
Sbjct: 2 TIVALKYPGGVVMAGDRRSTQGNMI---SGRDVRKVYITDDYTATGIAGTAAVAVEFARL 58
Query: 75 LEKKLEQY 82
+LE Y
Sbjct: 59 YAVELEHY 66
>gi|303244278|ref|ZP_07330615.1| proteasome endopeptidase complex, beta subunit
[Methanothermococcus okinawensis IH1]
gi|302485405|gb|EFL48332.1| proteasome endopeptidase complex, beta subunit
[Methanothermococcus okinawensis IH1]
Length = 220
Score = 44.3 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
++ + HY M TT + + VV+A D + ++G + A+K+ ++ I A
Sbjct: 1 MINNDHYKEYMKGTTTIGMVCKDGVVLATDKRATMGNLIADKEAKKLYKI-DDYIAMTIA 59
Query: 63 GSSADAFTLLERLEKKLEQYP 83
GS DA +L+ + + + Y
Sbjct: 60 GSVGDAQSLVRMISAETKIYK 80
>gi|297626319|ref|YP_003688082.1| 20S proteasome beta-subunit [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296922084|emb|CBL56652.1| 20S proteasome beta-subunit [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 288
Score = 44.3 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
ATTI+ V+ VV+AGD + + G + + + KV + G AG++ A L
Sbjct: 59 RATTIVAVKYRDGVVMAGDRRATRGHEIAQRDIEKV-FAADEATLIGVAGAAGMAIDLAR 117
Query: 74 RLEKKLEQY 82
+L Y
Sbjct: 118 LYRLELSHY 126
>gi|146186065|ref|XP_001032955.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|146143157|gb|EAR85292.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 247
Score = 44.3 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
++ +A T+ + V++AGD ++S G +++ + K+ RL N+ +G
Sbjct: 34 NEFNPYVFNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARL-TDNVFLATSGMY 92
Query: 66 ADAFTLLERLEKKLEQYPNQ 85
AD L ++L +L Y
Sbjct: 93 ADFAALSKQLSARLHMYKYN 112
>gi|325182084|emb|CCA16538.1| proteasome subunit beta type7 putative [Albugo laibachii Nc14]
Length = 314
Score = 44.3 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G VM N K+ + G AG++AD
Sbjct: 71 GTTICGVVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCG-AGTAADTENTTAL 129
Query: 75 LEKKLEQYPNQ 85
+ +LE +
Sbjct: 130 ISSQLELHRLN 140
>gi|332158405|ref|YP_004423684.1| proteasome, subunit beta [Pyrococcus sp. NA2]
gi|331033868|gb|AEC51680.1| proteasome, subunit beta [Pyrococcus sp. NA2]
Length = 216
Score = 44.3 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 65/179 (36%), Gaps = 26/179 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + +R V++A D Q SL V N RK+ + I AGS D +
Sbjct: 25 GTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPI-TDRIAITTAGSVGDVQMIARI 83
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK--TITLVITGMGDVLEPE- 131
LE + Y R K + NL + IL ++ + I G V EP
Sbjct: 84 LEAEARYYQFTWGRPM--------STKAMANLLSNILNENRWFPYLVQIIIGGYVEEPTI 135
Query: 132 -----------NGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
A GSG +AL+ A+++A KA+ A VYT
Sbjct: 136 ANLDPLGGLIFEDYTATGSGTPFALAILEEGYRKNLGIEKAKDLAIKAIKAAGSRDVYT 194
>gi|325182083|emb|CCA16537.1| proteasome subunit beta type7 putative [Albugo laibachii Nc14]
Length = 320
Score = 44.3 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G VM N K+ + G AG++AD
Sbjct: 77 GTTICGVVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCG-AGTAADTENTTAL 135
Query: 75 LEKKLEQYPNQ 85
+ +LE +
Sbjct: 136 ISSQLELHRLN 146
>gi|325182082|emb|CCA16536.1| proteasome subunit beta type7 putative [Albugo laibachii Nc14]
Length = 311
Score = 44.3 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G VM N K+ + G AG++AD
Sbjct: 68 GTTICGVVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCG-AGTAADTENTTAL 126
Query: 75 LEKKLEQYPNQ 85
+ +LE +
Sbjct: 127 ISSQLELHRLN 137
>gi|323455949|gb|EGB11816.1| hypothetical protein AURANDRAFT_52186 [Aureococcus anophagefferens]
Length = 236
Score = 44.3 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG V++ D +VS G + + KV L I +GS+AD + +
Sbjct: 21 GTTIMAVAYDGGVIMGADSRVSTGTYIANRVSDKVSHL-HDKIFMCRSGSAADTQAVSDY 79
Query: 75 LEKKLEQY-----PNQLLRSSVELAK 95
+ L + L++++ LAK
Sbjct: 80 VRHYLGSHAIEVGKPPLVKTAANLAK 105
>gi|20130281|ref|NP_611776.1| proteasome beta5R subunit [Drosophila melanogaster]
gi|7291554|gb|AAF46978.1| proteasome beta5R subunit [Drosophila melanogaster]
gi|201066095|gb|ACH92457.1| FI08137p [Drosophila melanogaster]
Length = 315
Score = 44.3 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 28/180 (15%)
Query: 7 KHYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
H ++M H TT L + G V++ D + + GQ + RK+ L ++ AG
Sbjct: 60 SHCGIRMDFDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVEL-NDYMLGTLAG 118
Query: 64 SSADAFTLLERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEA-----------M 109
+AD L K+ + QL R +V+ A + + N+ M
Sbjct: 119 GAADCVYWDRVLAKECRLH--QLRYRKRMTVDTAA-----RIICNISTEYKGMGLVMGMM 171
Query: 110 ILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
+ D +I + + V ++GSG YAL S A ++AR+A+
Sbjct: 172 LAGFDDEGPKLIYVDSEGMRSHGQVFSVGSGSPYALGVLDTGYRYDLSDQEAYDLARRAI 231
>gi|119193488|ref|XP_001247350.1| proteasome component [Coccidioides immitis RS]
gi|303312031|ref|XP_003066027.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105689|gb|EER23882.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320040001|gb|EFW21935.1| proteasome component [Coccidioides posadasii str. Silveira]
Length = 283
Score = 44.3 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 3 VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI 57
M D H +K+ H TT L R G +++A D + + G + +KV + +
Sbjct: 51 AMTDDHANPECPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NNCL 109
Query: 58 IAGFAGSSADA 68
+ AG +AD
Sbjct: 110 LGTMAGGAADC 120
>gi|85111469|ref|XP_963951.1| proteasome component PRE2 precursor [Neurospora crassa OR74A]
gi|28925704|gb|EAA34715.1| proteasome component PRE2 precursor [Neurospora crassa OR74A]
Length = 291
Score = 44.3 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ +K+ H TT L R G +++A D + + G + +KV + +++ AG
Sbjct: 58 ANPSCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSDLLGTMAG 116
Query: 64 SSADAFTLLERLEKKLEQY 82
+AD L L + +
Sbjct: 117 GAADCQYWLAWLGMQCRLH 135
>gi|301104168|ref|XP_002901169.1| proteasome subunit beta type-6, putative [Phytophthora infestans
T30-4]
gi|262101103|gb|EEY59155.1| proteasome subunit beta type-6, putative [Phytophthora infestans
T30-4]
Length = 218
Score = 44.3 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 63/175 (36%), Gaps = 31/175 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ VR +G VV+ D + S G V + K+ L + +GS+AD L +
Sbjct: 20 GTSIIAVRFNGGVVLGADSRTSTGTYVANRVSDKLTPL-HDRLFCCRSGSAADTQALSDY 78
Query: 75 LEKKLEQYP------------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKT-----I 117
+ L + L RS KD L A I++A
Sbjct: 79 VRYYLSSHSVELGRLPKVGTAANLFRSLCYHNKD--------RLLAGIIVAGWDPVKGGQ 130
Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
I G ++E GSG +Y + + EE +KA++ A
Sbjct: 131 VFSIPIGGAMVE--QDFAIGGSGSTYIYGLVDSEYRPNMTKEECQRFVKKALAHA 183
>gi|146162799|ref|XP_001010091.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|146146286|gb|EAR89846.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 282
Score = 44.3 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
++ H+ TTI+ + VV+ D + + G V + + K+ + G A
Sbjct: 30 IVSSPHFTKT--GTTIVGLVYKDGVVLGADTRATAGTIVAEKSCSKIHYIAPNMYCCG-A 86
Query: 63 GSSADAFTLLERLEKKLE 80
G++AD + +RL +LE
Sbjct: 87 GTAADTQWVTDRLSSELE 104
>gi|156062346|ref|XP_001597095.1| hypothetical protein SS1G_01289 [Sclerotinia sclerotiorum 1980]
gi|154696625|gb|EDN96363.1| hypothetical protein SS1G_01289 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 282
Score = 44.3 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ + +K+ H TT L R G +++A D + + G + +KV + ++ A
Sbjct: 55 HANPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NNCLLGTMA 113
Query: 63 GSSADA 68
G +AD
Sbjct: 114 GGAADC 119
>gi|154297340|ref|XP_001549097.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|150858579|gb|EDN33771.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 282
Score = 44.3 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ + +K+ H TT L R G +++A D + + G + +KV + ++ A
Sbjct: 55 HANPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NNCLLGTMA 113
Query: 63 GSSADA 68
G +AD
Sbjct: 114 GGAADC 119
>gi|328876747|gb|EGG25110.1| proteasome subunit beta type 7 [Dictyostelium fasciculatum]
Length = 271
Score = 44.3 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V VV+ D + + G V N K+ + G AG++AD
Sbjct: 34 GTTIVGVVYKDGVVLGADTRATEGPIVADKNCEKIHYIADNIYCCG-AGTAADTENTTNL 92
Query: 75 LEKKLEQYP 83
+ KL+ +
Sbjct: 93 ISSKLKLHQ 101
>gi|195170326|ref|XP_002025964.1| GL10209 [Drosophila persimilis]
gi|194110828|gb|EDW32871.1| GL10209 [Drosophila persimilis]
Length = 225
Score = 44.3 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 68/173 (39%), Gaps = 14/173 (8%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
MV D TTI+ V DG VVI D + S G V K+ R+ I
Sbjct: 1 MVYEMDFTDTPVSTGTTIMAVEFDGGVVIGADSRTSSGPYVANRVTDKLTRI-TDKIYCC 59
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSV--ELAKDWRMDKYLRN--LEAMILIA--D 114
+GS+AD + + + L + NQ + ++ E A ++R Y L A I++A D
Sbjct: 60 RSGSAADTQAIADIVAYSLNYHENQTSKDALVFEAASEFRNYCYNYRDSLLAGIIVAGWD 119
Query: 115 KT---ITLVITGMGDVL-EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
+ I G + EP GSG S+ R S EE +
Sbjct: 120 EQRGGQVFSIPLGGMLTREP---CTIGGSGSSFIYGYVREHFHEGMSKEECVK 169
>gi|59275961|dbj|BAD89548.1| proteasome subunit [Oncorhynchus mykiss]
gi|306494798|gb|ADM95870.1| PSMB9L [Oncorhynchus mykiss]
Length = 217
Score = 43.9 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 20/170 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
TTIL V +G V+I D + S+G + +++ + +L I AGS ADA +
Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGYYV--SSKTINKLIQVHDRIFCCIAGSLADAQAVT 73
Query: 73 ERLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVIT 122
+ + ++ + Q L++++ + K+ + L+A + A D+ +
Sbjct: 74 KAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTVA 132
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G +L GSG +Y A A S EE A A+++A
Sbjct: 133 LGGMLL--SQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALA 180
>gi|229582084|ref|YP_002840483.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|302595759|sp|C3NHF1|PSB2_SULIN RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|228012800|gb|ACP48561.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
Length = 211
Score = 43.9 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 22/181 (12%)
Query: 1 MVVMGDKHYAVK--MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNI 57
MV+MG+K + TT + ++ + VV+A D + S G V RKV L I
Sbjct: 1 MVIMGNKLQLENKILKGTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKV--LYITDKI 58
Query: 58 IAGFAGSSADAFTLLERLEKKLEQYPNQLLR--------SSVELAKDWRMDKYLRNLEAM 109
AGS AD + + L+ + N + + + LA KY + +
Sbjct: 59 GITTAGSVADLQFIYDVLKNIY--HYNNITKYGPISIKGIATRLANVLSATKYFPYIVQI 116
Query: 110 ILIA--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARK 164
++ D+ + +GD+ E +A GSG A+ + T + A ++A++
Sbjct: 117 LIGGYDDQPRLFNLDYLGDITE--ENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKR 174
Query: 165 A 165
A
Sbjct: 175 A 175
>gi|146101733|ref|XP_001469191.1| proteasome beta 2 subunit [Leishmania infantum]
gi|134073560|emb|CAM72293.1| putative proteasome beta 2 subunit [Leishmania infantum JPCM5]
gi|322503203|emb|CBZ38287.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 254
Score = 43.9 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 62/177 (35%), Gaps = 40/177 (22%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V VV+ D + + G V RK+ + + G AG+SAD +
Sbjct: 29 GTTIVGVVYKDGVVLGADTRATEGSIVADKCCRKIHYMAPNIMCCG-AGTSADTEAVTNM 87
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---------VITGMG 125
+ L + +E K R LEA+ L+ K ++ G
Sbjct: 88 VSSHLALHR-------LE------TGKQSRVLEALTLL--KRHLYRYQGHVSAALVLGGV 132
Query: 126 DV-------LEPEN-----GVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
DV + P + +GSG A++ + A+E+ A+
Sbjct: 133 DVEGPFLATIAPHGSTDRLPFVTMGSGSIAAMAQLEVAYKDNMTCEEAKELVTSAIH 189
>gi|18447060|gb|AAL68121.1| AT21741p [Drosophila melanogaster]
Length = 315
Score = 43.9 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 28/180 (15%)
Query: 7 KHYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
H ++M H TT L + G V++ D + + GQ + RK+ L ++ AG
Sbjct: 60 SHCGIRMDFDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVEL-NDYMLGTLAG 118
Query: 64 SSADAFTLLERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEA-----------M 109
+AD L K+ + QL R +V+ A + + N+ M
Sbjct: 119 GAADCVYWDRVLAKECRLH--QLRYRKRMTVDTAA-----RIICNISTEYKGMGLVMGMM 171
Query: 110 ILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
+ D +I + + V ++GSG YAL S A ++AR+A+
Sbjct: 172 LAGFDDEGPKLIYVDSEGMRSHGQVFSVGSGSPYALGVLDTGYRYDLSDQEAYDLARRAI 231
>gi|17508495|ref|NP_493271.1| Proteasome Beta Subunit family member (pbs-2) [Caenorhabditis
elegans]
gi|3874965|emb|CAB16855.1| C. elegans protein C47B2.4, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 277
Score = 43.9 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M MG K + TTI+ V G +V+ D + + G + + KV +L + G
Sbjct: 32 MCKMGGKAPKLTSTGTTIVAVAFKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACG 91
Query: 61 FAGSSADAFTLLERLEKKLE 80
AG++AD + + L L
Sbjct: 92 -AGTAADLDQVTKMLSGNLR 110
>gi|271967153|ref|YP_003341349.1| 20S proteasome alpha and subunit betas-like protein
[Streptosporangium roseum DSM 43021]
gi|302595788|sp|D2ATV1|PSB_STRRD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|270510328|gb|ACZ88606.1| 20S proteasome alpha and beta subunits-like protein
[Streptosporangium roseum DSM 43021]
Length = 282
Score = 43.9 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
HATTI+ G VV+AGD + + G + + + KV R G AG+++ +
Sbjct: 53 HATTIVAATCAGGVVMAGDRRATSGNIISQRDMEKVFRT-DDYSCMGIAGTASTGIEMAR 111
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 112 LYRVELEHY 120
>gi|268559794|ref|XP_002646072.1| C. briggsae CBR-PBS-2 protein [Caenorhabditis briggsae]
gi|187032980|emb|CAP27858.1| CBR-PBS-2 protein [Caenorhabditis briggsae AF16]
Length = 277
Score = 43.9 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 64/171 (37%), Gaps = 28/171 (16%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V G +V+ D + + G + + KV +L + G AG++AD
Sbjct: 46 GTTIVAVAYKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACG-AGTAAD------- 97
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-----------LEAMILIADKT----ITL 119
L++ + L + + R+ LR + A +LI
Sbjct: 98 LDQVTKMLSGNLRLLELNTGRKARVITALRQAKQHLFNYQGYIGAYLLIGGVDPTGPHLY 157
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
+ + G + A GSG A++ T + AE++ ++A+
Sbjct: 158 MCSANGTTMA--FPFTAQGSGSYAAITILERDFKTDMTKEEAEKLVQRALE 206
>gi|198460983|ref|XP_001361869.2| GA21041 [Drosophila pseudoobscura pseudoobscura]
gi|198137197|gb|EAL26448.2| GA21041 [Drosophila pseudoobscura pseudoobscura]
Length = 225
Score = 43.9 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 68/173 (39%), Gaps = 14/173 (8%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
MV D TTI+ V DG VVI D + S G V K+ R+ I
Sbjct: 1 MVYEMDFTDTPVSTGTTIMAVEFDGGVVIGADSRTSSGPYVANRVTDKLTRI-TDKIYCC 59
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSV--ELAKDWRMDKYLRN--LEAMILIA--D 114
+GS+AD + + + L + NQ + ++ E A ++R Y L A I++A D
Sbjct: 60 RSGSAADTQAIADIVAYSLNYHENQTSKDALVFEAASEFRNYCYNYRDSLLAGIIVAGWD 119
Query: 115 KT---ITLVITGMGDVL-EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
+ I G + EP GSG S+ R S EE +
Sbjct: 120 EQRGGQVFSIPLGGMLTREP---CTIGGSGSSFIYGYVREHFHEGMSKEECVK 169
>gi|330932201|ref|XP_003303688.1| hypothetical protein PTT_16006 [Pyrenophora teres f. teres 0-1]
gi|311320144|gb|EFQ88213.1| hypothetical protein PTT_16006 [Pyrenophora teres f. teres 0-1]
Length = 283
Score = 43.9 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ + +K+ H TT L R G +++A D + + G + +KV + ++ AG
Sbjct: 57 SNPNCPIKIAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIEI-NNCLLGTMAG 115
Query: 64 SSADA 68
+AD
Sbjct: 116 GAADC 120
>gi|189192022|ref|XP_001932350.1| proteasome subunit beta type-5 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187973956|gb|EDU41455.1| proteasome subunit beta type-5 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 283
Score = 43.9 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ + +K+ H TT L R G +++A D + + G + +KV + ++ AG
Sbjct: 57 SNPNCPIKIAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIEI-NNCLLGTMAG 115
Query: 64 SSADA 68
+AD
Sbjct: 116 GAADC 120
>gi|326428157|gb|EGD73727.1| proteasome subunit beta type-7 [Salpingoeca sp. ATCC 50818]
Length = 272
Score = 43.9 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 67/174 (38%), Gaps = 26/174 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + VV+ D + + G V N K+ + G AG++AD +
Sbjct: 31 GTTIAGIIFKDGVVLGADTRATEGTIVADKNCAKIHYMAPNMYCCG-AGTAADTEMVTNL 89
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT--LVITG---MGDV-- 127
+ +LE + +E + R+ LR L+ + I+ LV+ G G V
Sbjct: 90 VSSQLELHR-------LETGRQSRVITALRLLKQRLYRYQGHISAALVLGGVDVSGPVLY 142
Query: 128 -LEPEN-----GVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
+ P + +GSG A+ A A+++ R A IAA I
Sbjct: 143 SIYPHGSTDKLPFVTMGSGSLAAMGVFEARYKKDMELDEAKQLVRDA--IAAGI 194
>gi|185133585|ref|NP_001117731.1| low molecular mass protein 2 [Oncorhynchus mykiss]
gi|5823092|gb|AAD53037.1|AF115540_1 low molecular mass protein 2 [Oncorhynchus mykiss]
Length = 217
Score = 43.9 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 20/170 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
TTIL V +G V+I D + S+G + +++ + +L I AGS ADA +
Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGYYV--SSKTINKLIQVHDRIFCCIAGSLADAQAVT 73
Query: 73 ERLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVIT 122
+ + ++ + Q L++++ + K+ + L+A + A D+ +
Sbjct: 74 KAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTVA 132
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G +L GSG +Y A A S EE A A+++A
Sbjct: 133 LGGMLL--SQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALA 180
>gi|196007810|ref|XP_002113771.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190584175|gb|EDV24245.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 229
Score = 43.9 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D + M TTI+ V DG VVI D + + G V+ K+ R+ +I +GS+
Sbjct: 20 DWLNSEVMTGTTIMAVEYDGGVVIGADSRTTSGSYVVNRVTDKLTRIS-DSIYCCRSGSA 78
Query: 66 ADAFTLLERLEKKLEQYPNQL 86
AD + + + L + +L
Sbjct: 79 ADTQAIADIVAYSLNFHKMEL 99
>gi|156543654|ref|XP_001607442.1| PREDICTED: similar to proteasome subunit beta 7 [Nasonia
vitripennis]
Length = 277
Score = 43.9 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V + K+ L K G AG++AD E
Sbjct: 39 GTTIVGIIYKDGVILGADTRATEGSIVADKKSEKIHYLAKNMYCCG-AGTAADTEMTTEM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +LE + R
Sbjct: 98 ISSQLELHRLNTGR 111
>gi|94310143|ref|YP_583353.1| 20S proteasome, A and B subunits [Cupriavidus metallidurans CH34]
gi|93353995|gb|ABF08084.1| Putative 20S proteasome, A and B subunits [Cupriavidus
metallidurans CH34]
Length = 198
Score = 43.9 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 33/189 (17%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + VRK V I D V+ G T + +A R + + G+ G AG++A +
Sbjct: 2 TTCVVVRKGDEVAIGADALVTFGDTRLSRAYERNQKVIPVGDSFVGLAGTTAHFPVMRSL 61
Query: 75 LEKKLEQ----YPNQLLRSSVEL-----------AKDWRMDKYLRNLEAMILI---ADKT 116
L E+ + + R+ +++ K+ D Y E+ ++ A+
Sbjct: 62 LTGMGEECRLHTRDDVFRTFLKVHEKLKNEYFINTKEDEDDPY----ESSQIVCLIANSG 117
Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMS--I----- 168
+ +V + IGSG +YAL A A+ T A IAR + I
Sbjct: 118 GIFGVYSYREVFS-FDRFWGIGSGRNYALGAMHAVYDRTDLDAGAIARIGVEAGIEFDKS 176
Query: 169 -AADICVYT 176
AA I V+T
Sbjct: 177 SAAPIDVHT 185
>gi|225445670|ref|XP_002266488.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297736018|emb|CBI24056.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 43.9 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L + +GS+AD+ L +
Sbjct: 11 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLC-RSGSAADSQILSDY 69
Query: 75 LEKKLEQYPNQL-LRSSVELAKDW-RMDKYLRN--LEAMILIA--DKTITLVITG---MG 125
+ L Q+ QL ++V++A + R+ Y L+ +++ DK I G G
Sbjct: 70 VRYYLHQHTIQLGQPATVKVAANLVRLISYNNKNMLQTGLIVGGWDKHEGGKIYGVPLGG 129
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKA--MSIAAD 171
+LE GSG SY T++ AE++ KA ++IA D
Sbjct: 130 TILE--QPFAIGGSGSSYLYGFFDQEWKEGMTKDEAEKLVVKAVSLAIARD 178
>gi|116180334|ref|XP_001220016.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185092|gb|EAQ92560.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 283
Score = 43.9 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ +K+ H TT L R G +++A D + + G + +KV + +++ AG
Sbjct: 56 SNPSCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSDLLGTMAG 114
Query: 64 SSADAFTLLERLEKKLEQY 82
+AD L L + +
Sbjct: 115 GAADCQYWLAWLGMQCRLH 133
>gi|134078851|emb|CAK45910.1| unnamed protein product [Aspergillus niger]
Length = 379
Score = 43.9 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 18/91 (19%)
Query: 3 VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK---VRRLGK 54
M D H +K+ H TT L R G +++A D + + G + +K V RL +
Sbjct: 133 AMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSR 192
Query: 55 GN----------IIAGFAGSSADAFTLLERL 75
G ++ AG +A L+E+
Sbjct: 193 GEDKPSNEPTPGLLGTMAGGAAVCAILVEQF 223
>gi|71033575|ref|XP_766429.1| proteasome subunit beta type 7 precursor [Theileria parva strain
Muguga]
gi|68353386|gb|EAN34146.1| proteasome subunit beta type 7 precursor, putative [Theileria
parva]
Length = 262
Score = 43.9 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+A D + + G V N K+ ++ AG AG +AD
Sbjct: 31 GTTICGVMGKDSVVLAADTRATQGIIVADKNCSKLHKISDNIYCAG-AGVAADLEHTTLW 89
Query: 75 LEKKLEQYPNQLLR 88
L +E + +
Sbjct: 90 LANNIELHRLNTKK 103
>gi|284991133|ref|YP_003409687.1| 20S proteasome subunits A and B [Geodermatophilus obscurus DSM
43160]
gi|302595825|sp|D2S6E2|PSB_GEOOG RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PrcB; Flags: Precursor
gi|284064378|gb|ADB75316.1| 20S proteasome A and B subunits [Geodermatophilus obscurus DSM
43160]
Length = 280
Score = 43.9 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN 56
H TTI++V DG V++ GD + ++G + ++R++ ++ +
Sbjct: 52 HGTTIVSVTYDGGVLMGGDRRATMGNLI---SSREIEKVYPAD 91
>gi|224473798|gb|ACN49142.1| proteasome beta 9 like subunit [Oryzias dancena]
Length = 217
Score = 43.9 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TTIL DG VVI D + S+ G+ V KV ++ I AGS ADA + +
Sbjct: 16 GTTILAAVFDGGVVIGSDSRASMGGEFVSSKTINKVIQVY-DRIFCCMAGSLADAQAVTK 74
Query: 74 RLEKKLEQYPNQ-----LLRSSVELAKDW---RMDKYLRNLEAMILIA--DKT---ITLV 120
+ +L + Q L+ ++ + K+ D L+A + A DK V
Sbjct: 75 TAKFQLSFHSVQMENPPLVIAAASILKELCYNNKD----ELQAGFITAGWDKKKGPQVYV 130
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
++ G ++ V GSG +Y A + EE A A+++A
Sbjct: 131 VSLGGMLI--SQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALA 180
>gi|71021599|ref|XP_761030.1| hypothetical protein UM04883.1 [Ustilago maydis 521]
gi|46100884|gb|EAK86117.1| hypothetical protein UM04883.1 [Ustilago maydis 521]
Length = 451
Score = 43.9 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 69/180 (38%), Gaps = 25/180 (13%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L R G +++ D + + G + +KV + ++ AG +AD
Sbjct: 26 HGTTTLAFRFRGGIIVCVDSRATAGSYIASGTVKKVIEINPY-LLGTMAGGAADCQYWET 84
Query: 74 RLEKKLEQYP-NQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKT--ITL 119
L + + R SV A KYL NL MI DKT
Sbjct: 85 YLGIQCRLHELRNKERISVAAAS-----KYLSNLVYSYKGMGLSMGTMICGWDKTGPALF 139
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
+ G+ L + V ++GSG ++A S A+E+ R+++ AA Y+
Sbjct: 140 YVDSDGNRL--KGDVFSVGSGSTFAYGVLDQGYKWDLSDEEAQELGRRSIYAAAHRDAYS 197
>gi|57641364|ref|YP_183842.1| proteasome, beta subunit [Thermococcus kodakarensis KOD1]
gi|74502448|sp|Q5JDJ9|PSB1_PYRKO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|57159688|dbj|BAD85618.1| proteasome, beta subunit [Thermococcus kodakarensis KOD1]
Length = 203
Score = 43.9 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 47/196 (23%), Positives = 73/196 (37%), Gaps = 30/196 (15%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ TT + + VV+A D + SLG V+ KV ++ IAG AG+ D +L
Sbjct: 4 KLKGTTTVGIVCKDGVVLAADRRASLGNMVLSERVTKVFQIDDHLAIAG-AGTVGDILSL 62
Query: 72 LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------------AMILIADKTI- 117
+ L + + Y ++ R E++ K L L A L+
Sbjct: 63 VRLLRAEAKLYRAKVSR---EMSV-----KALATLTSNILHSGRGFAYMAWFLVGGYDSA 114
Query: 118 --TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
I G V E + A GSG +A S EE + +A+ A
Sbjct: 115 PRLYSIDAAGGVTE--DRFTAAGSGMEFAFSVLEENYRDGIPLEEGVKLALRAIKAATKR 172
Query: 173 CVYTNHNIVLETLKVG 188
V+T + L T+
Sbjct: 173 DVFTGGGVTLVTITEE 188
>gi|130856|sp|P28076|PSB9_MOUSE RecName: Full=Proteasome subunit beta type-9; AltName: Full=LMP-2d;
AltName: Full=Low molecular mass protein 2; AltName:
Full=Macropain chain 7; AltName: Full=Multicatalytic
endopeptidase complex chain 7; AltName: Full=Proteasome
chain 7; AltName: Full=Proteasome subunit beta-1i;
AltName: Full=Really interesting new gene 12 protein;
Flags: Precursor
gi|237568|gb|AAB20105.1| low molecular mass polypeptide complex subunit 2 [Mus sp.]
gi|984349|gb|AAA75304.1| 20S proteasome subunit Lmp2 [Mus musculus]
gi|984351|gb|AAA75305.1| 20S proteasome subunit Lmp2 [Mus musculus]
gi|1209537|gb|AAA98932.1| low molecular weight protein 2 Lmp2 [Mus musculus]
gi|2467355|dbj|BAA22579.1| low molecular mass polypeptide complex subunit 2 [Mus musculus]
gi|2467359|dbj|BAA22581.1| low molecular mass polypeptide complex subunit 2 [Mus spretus]
gi|2467363|dbj|BAA22583.1| low molecular mass polypeptide complex subunit 2 [Mus spretus]
gi|71059783|emb|CAJ18435.1| LMP-2 [Mus musculus]
gi|109732865|gb|AAI16365.1| Psmb9 protein [Mus musculus]
gi|228222|prf||1718343A LMP-2 gene
Length = 219
Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G V+ K+ L + I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQ-RIFCALSGSAADAQAIADM 78
Query: 75 LEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGM--G 125
+LE + + L+ ++ + K+ KY +L A +++A D+ + G G
Sbjct: 79 AAYQLELHGLELEEPPLVLAAANVVKN-ISYKYREDLLAHLIVAGWDQREGGQVYGTMGG 137
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
++ GSG SY A + EE
Sbjct: 138 MLIR--QPFTIGGSGSSYIYGYVDAAYKPGMTPEE 170
>gi|323649964|gb|ADX97068.1| proteasome subunit beta type-7 precursor [Perca flavescens]
Length = 238
Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 64/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G V N K+ + G AG++AD +
Sbjct: 32 GTTICGVVFKDGVVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQI 90
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNL--------EAMILI----ADKTITL 119
+ LE + +L R + ++ L+ + A +++ +
Sbjct: 91 ISSNLELHALSTGRLPRVATA-------NRMLKQMLFRYQGYIGAALVLGGVDCNGPHLY 143
Query: 120 VI--TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
I G D L + +GSG A++ A+++ R A IAA I
Sbjct: 144 SIYPHGSTDKL----PYVTMGSGSLAAMAVFEDRYKPDMEEDEAKQLVRDA--IAAGI 195
>gi|229366194|gb|ACQ58077.1| Proteasome subunit beta type-7 precursor [Anoplopoma fimbria]
Length = 277
Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 63/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTICGVVYKDGVVLGADTRATEGMIVADKNCSKIHFISPNIYCCG-AGTAADTEMTTQI 101
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNL--------EAMILI----ADKTITL 119
+ LE + +L R + ++ L+ + A +++ +
Sbjct: 102 ISSNLELHALSTGRLPRLATA-------NRMLKQMLFRYQGYISAALVLGGVDCNGPHLY 154
Query: 120 VI--TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
I G D L + +GSG A++ EE + R A IAA I
Sbjct: 155 SIYPHGSTDKL----PYVTMGSGSLAAMAVFEDRYKPDMEEEEAKRLVRDA--IAAGI 206
>gi|134098820|ref|YP_001104481.1| 20S proteasome beta-subunit precursor [Saccharopolyspora erythraea
NRRL 2338]
gi|302595782|sp|A4FBY1|PSB_SACEN RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|133911443|emb|CAM01556.1| 20S proteasome beta-subunit precursor [Saccharopolyspora erythraea
NRRL 2338]
Length = 284
Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG--KGNIIAGFAGSSADAFTL 71
H TTI+ + G V++AGD + ++G + + R + +L G AG++ A +
Sbjct: 55 HGTTIVALTFRGGVLLAGDRRATMGNLIAQ---RDMEKLYVTDDYSAVGIAGTAGIALEM 111
Query: 72 LERLEKKLEQY 82
+ +LE Y
Sbjct: 112 VRLYAIELEHY 122
>gi|17380242|sp|O35524|PSB9_MUSSI RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; AltName: Full=Macropain chain
7; AltName: Full=Multicatalytic endopeptidase complex
chain 7; AltName: Full=Proteasome chain 7; AltName:
Full=Proteasome subunit beta-1i; AltName: Full=Really
interesting new gene 12 protein; Flags: Precursor
gi|2467365|dbj|BAA22584.1| low molecular mass polypeptide complex subunit 2 [Mus spicilegus]
Length = 219
Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G V+ K+ L + I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQ-RIFCALSGSAADAQAIADM 78
Query: 75 LEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGM--G 125
+LE + + L+ ++ + K+ KY +L A +++A D+ + G G
Sbjct: 79 AAYQLELHGLELEEPPLVLAAANVVKN-ISYKYREDLLAHLIVAGWDQREGGQVYGTMGG 137
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
++ GSG SY A + EE
Sbjct: 138 MLIR--QPFTIGGSGSSYIYGYVDAAYKPGMTPEE 170
>gi|195568346|ref|XP_002102177.1| GD19639 [Drosophila simulans]
gi|194198104|gb|EDX11680.1| GD19639 [Drosophila simulans]
Length = 322
Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT++ + DG V+I + + ++G ++ RK+ L AG AG++ D L+E
Sbjct: 49 GTTVVGIVFDGGVIIGAESKAAIGSMILSKTIRKIVELQSNIFAAG-AGTARDTKALVEL 107
Query: 75 LEKKLEQYPNQ 85
+LE +
Sbjct: 108 TRAQLELHRMN 118
>gi|312221929|emb|CBY01869.1| similar to proteasome subunit beta type-5 [Leptosphaeria maculans]
Length = 283
Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ + +K+ H TT L R G +++A D + + G + +KV + ++ AG
Sbjct: 57 SNPNCPIKIAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIEI-NNCLLGTMAG 115
Query: 64 SSADA 68
+AD
Sbjct: 116 GAADC 120
>gi|195124145|ref|XP_002006554.1| GI21121 [Drosophila mojavensis]
gi|193911622|gb|EDW10489.1| GI21121 [Drosophila mojavensis]
Length = 314
Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 73/178 (41%), Gaps = 24/178 (13%)
Query: 7 KHYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+H V+M H TT L + G VV+ D + + G+ + +K+ L ++ AG
Sbjct: 60 EHCKVRMEFDHGTTTLGFKYQGGVVLCADSRATSGEYIGSQTMKKIVEL-NNYMLGTLAG 118
Query: 64 SSADAFTLLERLEKKLEQYPNQL-LRSSVELAKDWRMDKYLRNLEA----MILIA----- 113
+AD L ++ + + R SV+ A + + N+ A M L+
Sbjct: 119 GAADCVYWDRVLARECRLHELRYKRRISVDAAA-----RMMCNICAEYKGMGLVMGMILA 173
Query: 114 --DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
D + +I + + V ++GSG YAL S A ++AR+A+
Sbjct: 174 GCDDEGSKLIYVDSEGMRSHGSVFSVGSGSPYALGVLDTGYRWDLSNEEAYDLARRAI 231
>gi|302926861|ref|XP_003054378.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735319|gb|EEU48665.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 269
Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 68/168 (40%), Gaps = 21/168 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYISP-QIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TG 123
+ +LE + + R + + L K + +Y + A +++A T + G
Sbjct: 88 ISSQLELHSLSTGRKPRVVTCMTLLKQ-HLFRYQGYIGAYLVVAGVDPTGTHLFTVHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
D L + +GSG A+S S EE A+ +A+D
Sbjct: 147 STDKL----PYVTMGSGSLAAMSVFETQWKPDLSEEE----AVKLASD 186
>gi|46125017|ref|XP_387062.1| hypothetical protein FG06886.1 [Gibberella zeae PH-1]
Length = 283
Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ + +K+ H TT L R G +++A D + + G + +KV + ++ AG
Sbjct: 57 SNPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSVLLGTMAG 115
Query: 64 SSADAFTLLERLEKKLEQY 82
+AD L L + +
Sbjct: 116 GAADCQYWLAWLGMQCRLH 134
>gi|224073935|ref|XP_002191642.1| PREDICTED: proteasome (prosome, macropain) subunit, beta type, 7
[Taeniopygia guttata]
Length = 277
Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 64/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVIFKDGVVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTEMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV-- 127
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 128 -----LEPENGV-----MAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
+ P + +GSG A++ A+++ R A IAA I
Sbjct: 151 PHLYSIHPHGSTDKLPYVTMGSGSLAAMAVFEDKYKPDMEEEEAKQLVRDA--IAAGI 206
>gi|14590176|ref|NP_142241.1| proteasome beta subunit [Pyrococcus horikoshii OT3]
gi|74570532|sp|O57983|PSB1_PYRHO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|3256634|dbj|BAA29317.1| 197aa long hypothetical proteasome beta subunit [Pyrococcus
horikoshii OT3]
Length = 197
Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 71/179 (39%), Gaps = 26/179 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + ++ V++A D Q SL V N RK+ + I AGS D +
Sbjct: 6 GTTTVGIKVKDGVILAADTQASLDHMVETLNIRKIIPI-TDRIAITTAGSVGDVQMIARI 64
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK----TITLVITGMGDV--- 127
LE + Y R K + NL + IL +K + ++I G D
Sbjct: 65 LEAEARYYYFAWGRPM--------TTKAMANLLSNILNENKWFPYLVQIIIGGYVDEPTI 116
Query: 128 --LEPENGVM-----AIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYT 176
L+P G++ A GSG +A++ A+E+A KA+ A VYT
Sbjct: 117 ANLDPYGGLIFDNYTATGSGTPFAIAILEEGYKENLGIEEAKELAIKAIKAAGSRDVYT 175
>gi|509035|dbj|BAA40680.1| LMP-2 polypeptide [Mus musculus]
gi|984355|gb|AAA75307.1| 20S proteasome subunit Lmp2 [Mus musculus]
gi|2467347|dbj|BAA22575.1| low molecular mass polypeptide complex subunit 2 [Mus musculus
castaneus]
gi|2467353|dbj|BAA22578.1| low molecular mass polypeptide complex subunit 2 [Mus musculus
molossinus]
gi|30027662|gb|AAP13903.1| proteasome subunit [Mus sp.]
gi|74152640|dbj|BAE42601.1| unnamed protein product [Mus musculus]
Length = 219
Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G V+ K+ L + I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQ-RIFCALSGSAADAQAIADM 78
Query: 75 LEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGM--G 125
+LE + + L+ ++ + K+ KY +L A +++A D+ + G G
Sbjct: 79 AAYQLELHGLELEEPPLVLAAANVVKN-ISYKYREDLLAHLIVAGWDQREGGQVYGTMGG 137
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
++ GSG SY A + EE
Sbjct: 138 MLIR--QPFTIGGSGSSYIYGYVDAAYKPGMTPEE 170
>gi|281201254|gb|EFA75466.1| hypothetical protein PPL_10970 [Polysphondylium pallidum PN500]
Length = 848
Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 71/173 (41%), Gaps = 27/173 (15%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V +G VV+ D + + G V K+ + + I +GS+AD + +
Sbjct: 14 GTSIMAVAYNGGVVMGADSRTTTGSYVANRVTNKITPIHE-KIYCCRSGSAADTQAISDY 72
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYL-----RNLEAMILIA-----DKTITL 119
+ LE + ++L ++++ L + L NL A I++A +
Sbjct: 73 VRYYLEMHNSELGDDPDVKTAASLFQ------LLCYNNKNNLLAGIIVAGWDKHNGGSVY 126
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIA 169
I+ G +++ GSG +Y + + + E + ++++A
Sbjct: 127 NISLGGSMVQ--QPFAIGGSGSTYIYGYCDSKFKPDMTKDECVEFVKNSLALA 177
>gi|121709886|ref|XP_001272559.1| proteasome component Pre4, putative [Aspergillus clavatus NRRL 1]
gi|119400709|gb|EAW11133.1| proteasome component Pre4, putative [Aspergillus clavatus NRRL 1]
Length = 260
Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+++ V+ +G V IA D S G +N +++R G+ +I GF+G +D +
Sbjct: 40 GTSVVAVKFNGGVAIAADNLASYGSLARFSNVKRLRVFGESAVI-GFSGDVSDMQYIDRL 98
Query: 75 LEK--KLEQYP--NQLLRS 89
LE E Y +L +
Sbjct: 99 LESIDIRENYSTHGNMLNA 117
>gi|17380241|sp|O35523|PSB9_MUSPL RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; AltName: Full=Macropain chain
7; AltName: Full=Multicatalytic endopeptidase complex
chain 7; AltName: Full=Proteasome chain 7; AltName:
Full=Proteasome subunit beta-1i; AltName: Full=Really
interesting new gene 12 protein; Flags: Precursor
gi|2467357|dbj|BAA22580.1| low molecular mass polypeptide complex subunit 2 [Mus platythrix]
Length = 219
Score = 43.5 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G+ V+ K+ L + I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQ-RIFCALSGSAADAQAIADM 78
>gi|224827139|ref|ZP_03700235.1| 20S proteasome A and B subunits [Lutiella nitroferrum 2002]
gi|224600648|gb|EEG06835.1| 20S proteasome A and B subunits [Lutiella nitroferrum 2002]
Length = 195
Score = 43.5 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 65/169 (38%), Gaps = 27/169 (15%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQ-----TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
TTI+ V+K + IA D Q + G + K+ R +G+ AGS+A
Sbjct: 2 TTIVVVKKGSQIAIAADSQTTFGDDQKLLAGYDPHHNKIFR--QGDSYLAIAGSAAHDLV 59
Query: 71 LLERLE----KKLEQYPN--QLLRSSVELAKDWRMDKYLRNL----------EAMILIAD 114
L L+ K R K+ YLR + M+++A+
Sbjct: 60 LQSVLKGVHNKDFSSRQGLFDTFRKLHPKLKE---QFYLRPEEEEDDPYESSQMMVVVAN 116
Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
+ M +V E + AIGSG +A+ A SAEEIAR
Sbjct: 117 VHGIFGVYPMREVYE-FSRFWAIGSGRKFAMGAMYVAYEQDLSAEEIAR 164
>gi|291005825|ref|ZP_06563798.1| proteasome subunit beta [Saccharopolyspora erythraea NRRL 2338]
Length = 281
Score = 43.5 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG--KGNIIAGFAGSSADAFTL 71
H TTI+ + G V++AGD + ++G + + R + +L G AG++ A +
Sbjct: 52 HGTTIVALTFRGGVLLAGDRRATMGNLIAQ---RDMEKLYVTDDYSAVGIAGTAGIALEM 108
Query: 72 LERLEKKLEQY 82
+ +LE Y
Sbjct: 109 VRLYAIELEHY 119
>gi|224118628|ref|XP_002331409.1| predicted protein [Populus trichocarpa]
gi|118484942|gb|ABK94336.1| unknown [Populus trichocarpa]
gi|222873623|gb|EEF10754.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 43.5 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 29/177 (16%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L + +GS+AD+ T+ +
Sbjct: 16 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLC-RSGSAADSQTVSDY 74
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT--ITLVITGMGDVLE--- 129
+ L Q+ QL + + K NL M+ +K T +I G D E
Sbjct: 75 VRYFLHQHTIQLGQPA--------TVKVAANLVRMLSYNNKNFLQTGMIVGGWDKYEGGK 126
Query: 130 ----PENGVM------AIGSGGSYALS---AARALMSTQNSAEEIARKA--MSIAAD 171
P G + GSG SY A TQ AE++ KA ++IA D
Sbjct: 127 IYGVPLGGTLLELPFTIGGSGSSYLYGFFDQAWKDGMTQEEAEQLVVKAVSLAIARD 183
>gi|3024440|sp|P93395|PSB6_TOBAC RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Proteasome delta chain; AltName: Full=Tobacco
cryptogein-induced protein 7; Short=tcI 7; Flags:
Precursor
gi|1743356|emb|CAA70699.1| proteasome delta subunit [Nicotiana tabacum]
Length = 234
Score = 43.5 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L N+ +GS+AD+ + +
Sbjct: 13 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQL-TDNVYVCRSGSAADSQIVSDY 71
Query: 75 LEKKLEQYPNQL-LRSSVELAKDWRMDKYLR-----NLEAMILIA--DK---TITLVITG 123
+ L Q+ QL ++V++A + + + L L+ ++I DK I
Sbjct: 72 VRYFLHQHTIQLGQPATVKVAAN--LTRLLSYNNKDRLQTGMIIGGWDKYEGGKIYGIPP 129
Query: 124 MGDVLEPENGVMAIGSGGSYALS---AARALMSTQNSAEEIARKA--MSIAAD 171
G VLE GSG SY A TQ AE++ A ++IA D
Sbjct: 130 GGTVLE--QPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARD 180
>gi|167045028|gb|ABZ09692.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG8G15]
Length = 210
Score = 43.5 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M +H TT + ++ VV+ D + S G + N K++++ ++ AG
Sbjct: 1 MTTNIDEKILHGTTTVGIKASDGVVLCADMRASAGYFIANNNTMKIQKIY-DHVGLTLAG 59
Query: 64 SSADAFTLLERL 75
ADA L + L
Sbjct: 60 GVADAQNLTDIL 71
>gi|326469518|gb|EGD93527.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
gi|326478955|gb|EGE02965.1| proteasome component PUP1 [Trichophyton equinum CBS 127.97]
Length = 275
Score = 43.5 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 21/168 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + AG AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVANKNCEKIHYIAPSIWCAG-AGTAADTEFTTNL 87
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TG 123
+ +E + R+ + + K + +Y ++ A +++A T + G
Sbjct: 88 ISSNIELHSLSTGRAPRVATCMTMLKQ-HLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
D L + +GSG A+S ++ + +E A+ +A++
Sbjct: 147 STDKL----PYVTMGSGSLAAMSVFESMWKPSLTKDE----AIKLASE 186
>gi|154345087|ref|XP_001568485.1| proteasome beta 2 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065822|emb|CAM43599.1| putative proteasome beta 2 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 254
Score = 43.5 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 40/177 (22%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V VV+ D + + G V + RK+ + + G AG+SAD +
Sbjct: 29 GTTIVGVVYQDGVVLGADTRATEGSIVADKHCRKIHYMAPNIMCCG-AGTSADTEAVTNM 87
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---------VITGMG 125
+ L + +E K R LEA+ L+ K ++ G
Sbjct: 88 VSSHLALHR-------LE------TGKQSRVLEALTLL--KRHLYRYQGHVSAALVLGGV 132
Query: 126 DV-------LEPEN-----GVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
DV + P + +GSG A++ + A+E+ A+
Sbjct: 133 DVEGPFLATIAPHGSTDRLPFVTMGSGSIAAMAQMETAYKDNMTCEEAKELVASAIR 189
>gi|39975367|ref|XP_369074.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
gi|145018979|gb|EDK03258.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
Length = 284
Score = 43.5 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ + +K+ H TT L R G +++A D + + G + +KV + ++ A
Sbjct: 57 HANPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMA 115
Query: 63 GSSADAFTLLERLEKKLEQY 82
G +AD L L + +
Sbjct: 116 GGAADCQYWLAWLGMQCRLH 135
>gi|66358282|ref|XP_626319.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
gi|46228005|gb|EAK88925.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
Length = 248
Score = 43.5 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 70/176 (39%), Gaps = 35/176 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ ++ +V+A DG+ S G + ARK+ ++ + +GS+AD +
Sbjct: 51 GTTIVALKYKDGLVLAADGRTSTGPIIAFRAARKITQI-TDKVFMCRSGSAADTQIISRY 109
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITG-------- 123
+ + ++ + +E +D ++ K + ++ +I +K L +I G
Sbjct: 110 VRRIVQDHE-------LETGEDTKV-KSVASVARLISYQNKEHLLADMIIAGMDPNGEFK 161
Query: 124 ------MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-------AEEIARKAM 166
G ++E GSG Y S + ++ A ++ AM
Sbjct: 162 VFRIPLGGTLIE--GSYAISGSGSGYIYSMLDSKYHSEMDLDECKSFARDLVSHAM 215
>gi|269956287|ref|YP_003326076.1| 20S proteasome subunits A and B [Xylanimonas cellulosilytica DSM
15894]
gi|302595791|sp|D1BS26|PSB_XYLCX RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|269304968|gb|ACZ30518.1| 20S proteasome A and B subunits [Xylanimonas cellulosilytica DSM
15894]
Length = 270
Score = 43.5 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 64/185 (34%), Gaps = 38/185 (20%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ + HATTI+ + VV+AGD + + G + KV + G +GS+
Sbjct: 40 NAPLAPHATTIVALTFQDGVVMAGDRRATAGTMIASREIEKVFP-ADDYSVIGISGSAGI 98
Query: 68 AFTLLERLEKKLEQYP----------------NQLLRSSVELAKDWRMDKYLRNLEAMIL 111
L + +LE Y LLR ++ LA ++ ++
Sbjct: 99 GVDLARLFQLELEHYEKIEGSLLSLDGKANRLGTLLRGNLPLA-----------MQGFVV 147
Query: 112 I-------ADKTI--TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
+ D+ G E E+ GSG +A A + L A E
Sbjct: 148 VPLFGGYDLDRGAGRIFSYDATGGRYE-EHEHHGTGSGAIFARGALKKLWRPGMDAAEAV 206
Query: 163 RKAMS 167
+ A+
Sbjct: 207 KVAVE 211
>gi|258574735|ref|XP_002541549.1| proteasome component PRE2 [Uncinocarpus reesii 1704]
gi|237901815|gb|EEP76216.1| proteasome component PRE2 [Uncinocarpus reesii 1704]
Length = 283
Score = 43.5 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 3 VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI 57
M D H +K+ H TT L R G +++A D + + G + +KV + +
Sbjct: 51 AMTDDHANPNCPIKLAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIEI-NSCL 109
Query: 58 IAGFAGSSADA 68
+ AG +AD
Sbjct: 110 LGTMAGGAADC 120
>gi|17380239|sp|O35521|PSB9_MUSDU RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; AltName: Full=Macropain chain
7; AltName: Full=Multicatalytic endopeptidase complex
chain 7; AltName: Full=Proteasome chain 7; AltName:
Full=Proteasome subunit beta-1i; AltName: Full=Really
interesting new gene 12 protein; Flags: Precursor
gi|2467349|dbj|BAA22576.1| low molecular mass polypeptide complex subunit 2 [Mus terricolor]
Length = 219
Score = 43.5 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G V+ K+ L + I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQ-RIFCALSGSAADAQAIADM 78
Query: 75 LEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGM--G 125
+LE + + L+ ++ + K+ KY +L A +++A D+ + G G
Sbjct: 79 AAYQLELHGLELEEPPLVLAAANVVKN-ISYKYREDLLAHLIVAGWDQREGGQVYGTMGG 137
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
++ GSG SY A + EE
Sbjct: 138 MLIR--QPFTIGGSGSSYIYGYVDAAYKPGMTPEE 170
>gi|312076996|ref|XP_003141109.1| proteasome A-type and B-type family protein [Loa loa]
gi|307763727|gb|EFO22961.1| proteasome A-type and B-type family protein [Loa loa]
Length = 273
Score = 43.5 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
MG K ++ TTI+ +V+ D + + G V + KV +L G A
Sbjct: 30 TMGVKPPTMRSTGTTIVAATYKDGLVMGADSRATAGNIVADKHCEKVHKLTDSIYACG-A 88
Query: 63 GSSADAFTLLERLEKKLE 80
G++AD + + L +L
Sbjct: 89 GTAADLHQVTKMLSAQLR 106
>gi|303390653|ref|XP_003073557.1| proteasome subunit beta type-7 [Encephalitozoon intestinalis ATCC
50506]
gi|303302704|gb|ADM12197.1| proteasome subunit beta type-7 [Encephalitozoon intestinalis ATCC
50506]
Length = 227
Score = 43.5 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ ++ V++A D + + G V N K+ R+ I+ AG++ADA +
Sbjct: 6 GTTIVGMKYKTGVILAADTRSTQGPVVSDKNCEKIHRIS-DKIMCCGAGTAADAERVARM 64
Query: 75 LEKKLEQYPNQLLRS 89
++L + + R+
Sbjct: 65 ASRELRLFERKYFRA 79
>gi|84994864|ref|XP_952154.1| proteasome subunit y [Theileria annulata strain Ankara]
gi|65302315|emb|CAI74422.1| proteasome subunit y, putative [Theileria annulata]
Length = 294
Score = 43.1 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
++ K+ ++M TTI+ ++ V++ DG+ S GQ V ARK+ R+ NI +
Sbjct: 57 MLEKKYEDIQM-GTTIIGMKFMDGVILVADGRTSSGQIVANRVARKITRILP-NIFMLRS 114
Query: 63 GSSADAFTLLERLEKKLEQYPNQLLRS 89
GS+AD+ TL + + QL S
Sbjct: 115 GSAADSQTLSTIIRYHAQSLKQQLKPS 141
>gi|50423687|ref|XP_460428.1| DEHA2F01496p [Debaryomyces hansenii CBS767]
gi|49656097|emb|CAG88735.1| DEHA2F01496p [Debaryomyces hansenii]
Length = 282
Score = 43.1 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT + R G +V+A D + + G + KV R+ ++ AG +AD
Sbjct: 69 HGTTTMAFRFQGGIVVAVDSRATQGNWIASQTVNKVIRINPD-LLGTMAGGAADC 122
>gi|84489103|ref|YP_447335.1| PsmB [Methanosphaera stadtmanae DSM 3091]
gi|121697945|sp|Q2NI68|PSB_METST RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|84372422|gb|ABC56692.1| PsmB [Methanosphaera stadtmanae DSM 3091]
Length = 205
Score = 43.1 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M TT + VV+A + + ++G V NA K+ ++ I A AG+ + A +L+
Sbjct: 7 MEGTTTVGFVCTDGVVLATETRATMGSLVANKNADKLFQI-DDKIGATIAGTVSHAQSLM 65
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDW---RMDKYLRN----LEAMILIADKT--ITLVITG 123
+ L+ ++ Y LR+ +++ D L++ ++ ++ DK +
Sbjct: 66 DILKAEISLYK---LRNEKDMSIDALAVLTSNILKSRPYYVQTILAGVDKDGAKLYTLDP 122
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
G + P+ + GSG YA + + EE IA KA++ A + VY+ +N
Sbjct: 123 SGSYI-PDT-FTSTGSGSPYAFGVLEDRYNEDITTEEGKKIAIKAITSAMERDVYSGNN 179
>gi|222445334|ref|ZP_03607849.1| hypothetical protein METSMIALI_00962 [Methanobrevibacter smithii
DSM 2375]
gi|261350105|ref|ZP_05975522.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
gi|222434899|gb|EEE42064.1| hypothetical protein METSMIALI_00962 [Methanobrevibacter smithii
DSM 2375]
gi|288860891|gb|EFC93189.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
Length = 204
Score = 43.1 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 68/170 (40%), Gaps = 16/170 (9%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TT + + VV A + + S+G V A K+ ++ +I+ AGS DA L+
Sbjct: 6 LEGTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKI-NDHIVTTIAGSVGDAQNLM 64
Query: 73 ERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI--TLVITGM 124
+ +E ++ Y + ++ A R ++ ++ D +
Sbjct: 65 KIIEAEVSLYQMRNNDKMSVKAAASVTANILRSGPMY--VQTLLGGMDGDKPSLYSLDPA 122
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAAD 171
G ++E + ++ GSG A T + EIA +A+ A++
Sbjct: 123 GGMIE--DTYISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASE 170
>gi|148643097|ref|YP_001273610.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
gi|302595842|sp|A5UM14|PSB_METS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|148552114|gb|ABQ87242.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
Length = 204
Score = 43.1 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 68/170 (40%), Gaps = 16/170 (9%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TT + + VV A + + S+G V A K+ ++ +I+ AGS DA L+
Sbjct: 6 LEGTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKI-NDHIVTTIAGSVGDAQNLM 64
Query: 73 ERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTI--TLVITGM 124
+ +E ++ Y + ++ A R ++ ++ D +
Sbjct: 65 KIIEAEVSLYQMRNNDKISVKAAASVTANILRSGPMY--VQTLLGGMDGDKPSLYSLDPA 122
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAAD 171
G ++E + ++ GSG A T + EIA +A+ A++
Sbjct: 123 GGMIE--DTYISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASE 170
>gi|5833465|gb|AAD53521.1|AF155581_1 proteasome subunit beta 7 [Danio rerio]
Length = 275
Score = 43.1 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 62/177 (35%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + VV+ D + + G V N K+ + G AG++AD +
Sbjct: 41 GTTICGIVYKDGVVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQI 99
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNLEAMILIADK--TITLVITG---MGD 126
+ LE + +L R + ++ L+ M+ LV+ G G
Sbjct: 100 ISSNLELHSLSTGRLPRVATA-------NRMLKQ---MLFRYQGYIGAALVLGGVDCTGP 149
Query: 127 ---VLEPENGV-----MAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
+ P + +GSG A++ A+ + R A IAA I
Sbjct: 150 HLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYRPDMEEEDAKSLVRDA--IAAGI 204
>gi|148694874|gb|EDL26821.1| proteasome (prosome, macropain) subunit, beta type 7, isoform CRA_a
[Mus musculus]
Length = 266
Score = 43.1 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLTTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGI 206
>gi|327303268|ref|XP_003236326.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326461668|gb|EGD87121.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 275
Score = 43.1 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 21/168 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + AG AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKIHYIAPSIWCAG-AGTAADTEFTTNL 87
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TG 123
+ +E + R+ + + K + +Y ++ A +++A T + G
Sbjct: 88 ISSNIELHSLSTGRAPRVATCMTMLKQ-HLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
D L + +GSG A+S ++ + +E A+ +A++
Sbjct: 147 STDKL----PYVTMGSGSLAAMSVFESMWKPSLTKDE----AIKLASE 186
>gi|302509436|ref|XP_003016678.1| hypothetical protein ARB_04970 [Arthroderma benhamiae CBS 112371]
gi|302655770|ref|XP_003019669.1| hypothetical protein TRV_06298 [Trichophyton verrucosum HKI 0517]
gi|291180248|gb|EFE36033.1| hypothetical protein ARB_04970 [Arthroderma benhamiae CBS 112371]
gi|291183406|gb|EFE39024.1| hypothetical protein TRV_06298 [Trichophyton verrucosum HKI 0517]
Length = 275
Score = 43.1 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 21/168 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + AG AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKIHYIAPSIWCAG-AGTAADTEFTTNL 87
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TG 123
+ +E + R+ + + K + +Y ++ A +++A T + G
Sbjct: 88 ISSNIELHSLSTGRAPRVATCMTMLKQ-HLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
D L + +GSG A+S ++ + +E A+ +A++
Sbjct: 147 STDKL----PYVTMGSGSLAAMSVFESMWKPSLTKDE----AIKLASE 186
>gi|195129621|ref|XP_002009254.1| GI11352 [Drosophila mojavensis]
gi|193920863|gb|EDW19730.1| GI11352 [Drosophila mojavensis]
Length = 270
Score = 43.1 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ L K G AG++AD +
Sbjct: 39 GTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEMTTDL 97
Query: 75 LEKKLEQYPNQLLR 88
+ +LE + R
Sbjct: 98 ISSQLELHRLNTER 111
>gi|145255853|ref|XP_001399121.1| proteasome subunit beta type-4 [Aspergillus niger CBS 513.88]
gi|134084718|emb|CAK43375.1| unnamed protein product [Aspergillus niger]
Length = 260
Score = 43.1 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+++ V+ +G V IA D S G A+ +++R+ + I GF+G +D +
Sbjct: 40 GTSVVAVKFNGGVAIAADNLASYGSLARFADVKRLRK-FGDSAIIGFSGDVSDMQYIDRL 98
Query: 75 LEKK 78
LE
Sbjct: 99 LESI 102
>gi|79325892|ref|NP_001031759.1| PBA1; endopeptidase/ peptidase/ threonine-type endopeptidase
[Arabidopsis thaliana]
gi|332660488|gb|AEE85888.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
Length = 234
Score = 43.1 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 72/178 (40%), Gaps = 30/178 (16%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L N+ +GS+AD+ + +
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQL-TDNVYVCRSGSAADSQVVSDY 70
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGDVLE-- 129
+ L Q+ Q + + K NL M+ +K L +I G D E
Sbjct: 71 VRYFLHQHTIQHGQPA--------TVKVSANLIRMLAYNNKQNMLQTGLIVGGWDKYEGG 122
Query: 130 -----P------ENGVMAIGSGGSYALS---AARALMSTQNSAEEIARKA--MSIAAD 171
P E GSG SY A T+ AE++ KA ++IA D
Sbjct: 123 KIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARD 180
>gi|315427032|dbj|BAJ48649.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 201
Score = 43.1 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 19/177 (10%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ T L +R VVIA + + + G VM ARKV ++ ++ A AG AD
Sbjct: 4 PLYYPGATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKISN-SVGAACAGVVADMQ 62
Query: 70 TLLERLEKKLEQY---PNQLLRSSVELAK--DWR--MDKYLRN-LEAMILIADKT--ITL 119
+++ + + Y + S +AK W ++Y +E ++ D +
Sbjct: 63 NMIKEVTAVVNLYRLEQG-VEPSVKTVAKILSWNLFGNRYFPYFMETIVGGIDSQGPHVI 121
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMS--IAAD 171
V+ +G ++E + +G+G A+ L SA EI A KA+ IA D
Sbjct: 122 VLDPLGSMIE--DDYAVVGTGAEVAVGVIENLYRKDMSATEIRDLATKAIKASIARD 176
>gi|40889405|pdb|1Q5R|H Chain H, The Rhodococcus 20s Proteasome With Unprocessed
Pro-Peptides
gi|40889406|pdb|1Q5R|I Chain I, The Rhodococcus 20s Proteasome With Unprocessed
Pro-Peptides
gi|40889407|pdb|1Q5R|J Chain J, The Rhodococcus 20s Proteasome With Unprocessed
Pro-Peptides
gi|40889408|pdb|1Q5R|K Chain K, The Rhodococcus 20s Proteasome With Unprocessed
Pro-Peptides
gi|40889409|pdb|1Q5R|L Chain L, The Rhodococcus 20s Proteasome With Unprocessed
Pro-Peptides
gi|40889410|pdb|1Q5R|M Chain M, The Rhodococcus 20s Proteasome With Unprocessed
Pro-Peptides
gi|40889411|pdb|1Q5R|N Chain N, The Rhodococcus 20s Proteasome With Unprocessed
Pro-Peptides
Length = 294
Score = 43.1 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTI+ + G V++AGD + + G + + V + AG AG++ A L+
Sbjct: 64 HGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEAV-YVTDEYSAAGIAGTAGIAIELVR 122
Query: 74 RLEKKLEQY 82
+LE Y
Sbjct: 123 LFAVELEHY 131
>gi|303281104|ref|XP_003059844.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458499|gb|EEH55796.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 275
Score = 43.1 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V G VV+ D + + G+TV N K+ + G AG++AD +
Sbjct: 16 GTTISGVVFKGGVVLGADTRSTNGETVADKNCEKIHYIAPNIYCCG-AGTAADTEAVTGM 74
Query: 75 LEKKLEQYPNQLLRSS 90
+ LE + RSS
Sbjct: 75 IASNLELHRMATKRSS 90
>gi|17380240|sp|O35522|PSB9_MUSMB RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; AltName: Full=Macropain chain
7; AltName: Full=Multicatalytic endopeptidase complex
chain 7; AltName: Full=Proteasome chain 7; AltName:
Full=Proteasome subunit beta-1i; AltName: Full=Really
interesting new gene 12 protein; Flags: Precursor
gi|2467351|dbj|BAA22577.1| low molecular mass polypeptide complex subunit 2 [Mus musculus
bactrianus]
Length = 219
Score = 43.1 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G V+ K+ L + I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQ-RIFCALSGSAADAQAIADM 78
>gi|157909841|ref|NP_001039029.2| proteasome subunit beta type-7 [Danio rerio]
gi|141796175|gb|AAI35051.1| Proteasome (prosome, macropain) subunit, beta type, 7 [Danio rerio]
gi|157888630|emb|CAE30392.2| proteasome (prosome, macropain) subunit, beta type, 7 [Danio rerio]
gi|190340004|gb|AAI63781.1| Proteasome (prosome, macropain) subunit, beta type, 7 [Danio rerio]
Length = 277
Score = 43.1 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 62/177 (35%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + VV+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTICGIVYKDGVVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQI 101
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNLEAMILIADK--TITLVITG---MGD 126
+ LE + +L R + ++ L+ M+ LV+ G G
Sbjct: 102 ISSNLELHSLSTGRLPRVATA-------NRMLKQ---MLFRYQGYIGAALVLGGVDCTGP 151
Query: 127 ---VLEPENGV-----MAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
+ P + +GSG A++ A+ + R A IAA I
Sbjct: 152 HLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYRPDMEEEDAKSLVRDA--IAAGI 206
>gi|328869271|gb|EGG17649.1| proteasome subunit beta type 6 [Dictyostelium fasciculatum]
Length = 214
Score = 42.8 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 27/173 (15%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D + + G + K+ + + I +GS+AD + +
Sbjct: 14 GTTIMAVEFDGGVVMGADSRTTTGAYIANRVTNKITPIHE-KIYCCRSGSAADTQAISDY 72
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYL-----RNLEAMILIA--DKTI---TL 119
+ LE + +L ++++ L + L NL A I++A DK
Sbjct: 73 VRYYLEMHTQELDDQPVVKTAASLFQ------LLCYNNKNNLMAGIIVAGWDKDKGGSVY 126
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIA 169
I+ G ++ + GSG +Y A + EE + A+++A
Sbjct: 127 NISLGGSMI--KQPFAMSGSGSTYLYGHCDAQFKPGMTKEECVKFVQNALALA 177
>gi|170585560|ref|XP_001897550.1| Proteasome A-type and B-type family protein [Brugia malayi]
gi|158594857|gb|EDP33434.1| Proteasome A-type and B-type family protein [Brugia malayi]
Length = 273
Score = 42.8 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
MG K +K TTI+ +V+ D + + G + + KV +L G AG
Sbjct: 31 MGVKAPMMKSTGTTIVATTYKDGLVMGADSRATAGNIIADKHCEKVHKLTDSIYACG-AG 89
Query: 64 SSADAFTLLERLEKKLE 80
++AD + + L +L
Sbjct: 90 TAADLNQVTKMLSAQLR 106
>gi|309425|gb|AAA39439.1| proteasome [Mus musculus]
Length = 213
Score = 42.8 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G V+ K+ L + I +GS+ADA + +
Sbjct: 72 TTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQ-RIFCALSGSAADAQAIADM 129
>gi|299752963|ref|XP_002911819.1| proteasome component pts1 [Coprinopsis cinerea okayama7#130]
gi|298410081|gb|EFI28325.1| proteasome component pts1 [Coprinopsis cinerea okayama7#130]
Length = 313
Score = 42.8 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 69/185 (37%), Gaps = 26/185 (14%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
D +K+ H TT L R G V++A D + + G + +KV + ++ A
Sbjct: 71 HADPSCRIKIQHGTTTLAFRFQGGVIVAVDSRATAGSYIASGTVKKVIEINPY-LLGTMA 129
Query: 63 GSSADAFTLLERLEKKLEQYP-NQLLRSSVELAKDWRMDKYLRNL-----------EAMI 110
G +AD L + R SV A K+L NL MI
Sbjct: 130 GGAADCQYWETYLGMHCRLHELRNKERISVSAAS-----KFLSNLVYSYKGMGLSMGTMI 184
Query: 111 LIADKT--ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKA 165
DKT + G L + + ++GSG ++A T A+E+ R++
Sbjct: 185 CGWDKTGPAIFYVDSDGTRL--KGDLFSVGSGSTFAYGVLDQGYRWDLTDAEAQELGRRS 242
Query: 166 MSIAA 170
+ A
Sbjct: 243 IYAAG 247
>gi|322707035|gb|EFY98614.1| proteasome component PRE2 precursor [Metarhizium anisopliae ARSEF
23]
Length = 283
Score = 42.8 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ +K+ H TT L R G +++A D + + G + +KV + ++ AG
Sbjct: 57 SNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSVLLGTMAG 115
Query: 64 SSADAFTLLERLEKKLEQY 82
+AD L L + +
Sbjct: 116 GAADCQYWLAWLGMQCRLH 134
>gi|70606695|ref|YP_255565.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius DSM
639]
gi|121725055|sp|Q4JAA8|PSB2_SULAC RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|68567343|gb|AAY80272.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius DSM
639]
Length = 203
Score = 42.8 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 20/168 (11%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAFTL 71
+ TT + ++ VV+A D + S G V RKV L NI AGS AD +
Sbjct: 8 LKGTTTVGIKVKDGVVLAADRRASAGYYVAHKYVRKV--LYVTDNIGITTAGSVADLQFI 65
Query: 72 LERLEKKLEQYPNQLLRS--------SVELAKDWRMDKYLRNLEAMIL--IADKTITLVI 121
E L K + N + + LA KY L +++ + D+ +
Sbjct: 66 YEAL--KYIYHRNSITGEGPITVKGIATWLANVLSSSKYFPYLVQILIGGVDDQPRLYNL 123
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
+GD+ E E A GSG AL + S A E+A++A+
Sbjct: 124 DYLGDITEEEY--TATGSGSPEALGVLEDNYKPEMSLDEAAELAKRAI 169
>gi|330508619|ref|YP_004385047.1| proteasome subunit beta [Methanosaeta concilii GP-6]
gi|328929427|gb|AEB69229.1| proteasome subunit beta [Methanosaeta concilii GP-6]
Length = 206
Score = 42.8 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 64/157 (40%), Gaps = 11/157 (7%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT + V DG VV+A + + ++G + + A+K+ ++ + AG DA +L+
Sbjct: 5 FKGTTTVGVLCDGGVVLASESRATMGSFIASSQAKKIYQI-DDLVGMTTAGGVGDAQSLV 63
Query: 73 ERLEK-----KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT----ITLVITG 123
++ K+++ +++ + + + +++ +
Sbjct: 64 RMVQVEARLYKMQRGEGLTVKAVTTMLANILSSRRYYPFMVQLIMGGVDRYGPRIYSLDA 123
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+G +E E ++A GSG A A+ S E+
Sbjct: 124 LGGQIE-ERRIVATGSGSPVAYGVLEAMYKPGISVED 159
>gi|302915857|ref|XP_003051739.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732678|gb|EEU46026.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 282
Score = 42.8 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ +K+ H TT L R G +++A D + + G + +KV + ++ AG
Sbjct: 56 SNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSVLLGTMAG 114
Query: 64 SSADAFTLLERLEKKLEQY 82
+AD L L + +
Sbjct: 115 GAADCQYWLAWLGMQCRLH 133
>gi|221126419|ref|XP_002155480.1| PREDICTED: similar to Proteasome subunit beta type-7 [Hydra
magnipapillata]
Length = 262
Score = 42.8 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 65/172 (37%), Gaps = 32/172 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + VV+ D + + G TV N K+ + G AG++AD +
Sbjct: 28 GTTIVGLVYKDGVVLGADTRATEGNTVADKNCAKIHYIAPNIYCCG-AGTAADTEYTTQI 86
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV-- 127
+ +E + + + ++ + K YL + + A ++ G DV
Sbjct: 87 ISANIELHRLETQKKPRVATACRMLKQ-----YLHRYQGHVSAA------LVLGGVDVTG 135
Query: 128 -----LEPENGV-----MAIGSGGSYALSAARALMSTQN---SAEEIARKAM 166
+ P + +GSG A++ A A+E+ R+A+
Sbjct: 136 PCLYTIAPHGSTDKLPYVTMGSGSLAAMAVFEAGFKPYMELDDAKELVRQAI 187
>gi|310790979|gb|EFQ26512.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 286
Score = 42.8 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ +K+ H TT L R G +++A D + + G + +KV + ++ AG
Sbjct: 60 SNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSVLLGTMAG 118
Query: 64 SSADAFTLLERLEKKLEQY 82
+AD L L + +
Sbjct: 119 GAADCQYWLAWLGMQCRLH 137
>gi|315039657|ref|XP_003169204.1| proteasome component PRE2 [Arthroderma gypseum CBS 118893]
gi|311337625|gb|EFQ96827.1| proteasome component PRE2 [Arthroderma gypseum CBS 118893]
Length = 283
Score = 42.8 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ +K+ H TT L R G +++A D + + G + +KV + ++ A
Sbjct: 55 HANPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMA 113
Query: 63 GSSADA 68
G +AD
Sbjct: 114 GGAADC 119
>gi|226292176|gb|EEH47596.1| proteasome component PRE2 [Paracoccidioides brasiliensis Pb18]
Length = 283
Score = 42.8 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ + +K+ H TT L R G +++A D + + G + +KV + ++ A
Sbjct: 56 HANPNCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMA 114
Query: 63 GSSADA 68
G +AD
Sbjct: 115 GGAADC 120
>gi|324521809|gb|ADY47931.1| Proteasome subunit beta type-7 [Ascaris suum]
Length = 273
Score = 42.8 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 16/179 (8%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M MG K ++ TTI+ +V+ D + + G + + KV +L + G
Sbjct: 28 MAEMGVKPPTLRSTGTTIVAATYKDGLVMGADSRATAGNIIADKHCTKVHKLTESMFACG 87
Query: 61 FAGSSADAFTLLERLEKK---LEQYPNQLLR--SSVELAKDWRMDKYLRNLEAMILIADK 115
AG++AD + + L + LE + R ++V AK + +Y+ + A +LI
Sbjct: 88 -AGTAADLDQVTKMLSAQLRLLELNTGKKARVVTAVRRAKQ-HLFQYMGYIGAYLLIGGV 145
Query: 116 T----ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMS 167
+ G + ++GSG A+S + A E+ ++A+
Sbjct: 146 DPTGPHLYECSANGTTM--SKPYASMGSGSYAAISILERDFKFGMNEEEACELVQRALQ 202
>gi|28573221|ref|NP_649515.3| proteasome beta2R2 subunit [Drosophila melanogaster]
gi|18446895|gb|AAL68040.1| AT05866p [Drosophila melanogaster]
gi|28381097|gb|AAF52066.3| proteasome beta2R2 subunit [Drosophila melanogaster]
gi|220949622|gb|ACL87354.1| CG12161-PA [synthetic construct]
gi|220958464|gb|ACL91775.1| CG12161-PA [synthetic construct]
Length = 322
Score = 42.8 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT++ + DG V+I + + + G V RK+ L AG AG++ D L+E
Sbjct: 49 GTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAG-AGTARDTKALVEL 107
Query: 75 LEKKLEQYPNQ 85
+LE +
Sbjct: 108 TRAQLELHRMN 118
>gi|302503731|ref|XP_003013825.1| proteasome component Pre3, putative [Arthroderma benhamiae CBS
112371]
gi|291177391|gb|EFE33185.1| proteasome component Pre3, putative [Arthroderma benhamiae CBS
112371]
gi|326474427|gb|EGD98436.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
gi|326481493|gb|EGE05503.1| proteasome component PRE2 [Trichophyton equinum CBS 127.97]
Length = 283
Score = 42.8 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ +K+ H TT L R G +++A D + + G + +KV + ++ A
Sbjct: 55 HANPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMA 113
Query: 63 GSSADA 68
G +AD
Sbjct: 114 GGAADC 119
>gi|225681120|gb|EEH19404.1| proteasome subunit beta type-5 [Paracoccidioides brasiliensis Pb03]
Length = 283
Score = 42.8 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ + +K+ H TT L R G +++A D + + G + +KV + ++ A
Sbjct: 56 HANPNCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMA 114
Query: 63 GSSADA 68
G +AD
Sbjct: 115 GGAADC 120
>gi|152965839|ref|YP_001361623.1| 20S proteasome A and B subunits [Kineococcus radiotolerans
SRS30216]
gi|302595739|sp|A6W970|PSB_KINRD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|151360356|gb|ABS03359.1| 20S proteasome A and B subunits [Kineococcus radiotolerans
SRS30216]
Length = 302
Score = 42.8 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 36/178 (20%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL-- 71
HATTI+ + VV+AGD + + G + + + +KV + + AG AG++ A +
Sbjct: 66 HATTIVALVFADGVVMAGDRRATAGPMIAQRDIQKVFQT-DEHSCAGIAGTAGLAVEMIR 124
Query: 72 --------LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIADKTI 117
E+LE L + + ++R+++ +A ++ L + L A
Sbjct: 125 LFQVELEHFEKLEGTLMSFEGKANRLSTMIRANLGMA--------MQGLAVVPLFAGYD- 175
Query: 118 TLVITGMGDVL--------EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
+ G G ++ E+ +GSG +A + + L S E R A+
Sbjct: 176 --LDAGRGRIVGYDITGGRSEEHDHHTVGSGSLFARGSLKKLYRPGMSEAETVRVALE 231
>gi|295673490|ref|XP_002797291.1| proteasome component PRE2 [Paracoccidioides brasiliensis Pb01]
gi|226282663|gb|EEH38229.1| proteasome component PRE2 [Paracoccidioides brasiliensis Pb01]
Length = 283
Score = 42.8 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ + +K+ H TT L R G +++A D + + G + +KV + ++ A
Sbjct: 56 HANPNCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMA 114
Query: 63 GSSADA 68
G +AD
Sbjct: 115 GGAADC 120
>gi|296812899|ref|XP_002846787.1| proteasome component PUP1 [Arthroderma otae CBS 113480]
gi|238842043|gb|EEQ31705.1| proteasome component PUP1 [Arthroderma otae CBS 113480]
Length = 275
Score = 42.8 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 21/168 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + AG AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKIHYIAPSIWCAG-AGTAADTEFTTNL 87
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TG 123
+ +E + R+ + + K + +Y ++ A +++A T + G
Sbjct: 88 ISSNIELHSLSTGRAPRVATCMTMLKQ-HLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
D L + +GSG A+S ++ + EE A+ + +D
Sbjct: 147 STDKL----PYVTMGSGSLAAMSVFESMWKPSLTKEE----AIKLTSD 186
>gi|327302090|ref|XP_003235737.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326461079|gb|EGD86532.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 283
Score = 42.8 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ +K+ H TT L R G +++A D + + G + +KV + ++ A
Sbjct: 55 HANPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMA 113
Query: 63 GSSADA 68
G +AD
Sbjct: 114 GGAADC 119
>gi|225557527|gb|EEH05813.1| proteasome component PRE2 [Ajellomyces capsulatus G186AR]
Length = 283
Score = 42.8 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ +K+ H TT L R G +++A D + + G + +KV + ++ A
Sbjct: 56 HSNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMA 114
Query: 63 GSSADA 68
G +AD
Sbjct: 115 GGAADC 120
>gi|195122518|ref|XP_002005758.1| GI18902 [Drosophila mojavensis]
gi|193910826|gb|EDW09693.1| GI18902 [Drosophila mojavensis]
Length = 253
Score = 42.8 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
+T++ +R +V+ + + + ++ ARK+R+L +++ FAG +ADA LL
Sbjct: 29 KGSTVVGLRTKDSIVLGVERKA-VDVLQVERTARKIRKL-DDHLVVTFAGLTADARILLN 86
Query: 74 RLEKKLEQYPNQLLR-SSVE 92
R + + + + R ++VE
Sbjct: 87 RAQSEAQSHRLNFERPATVE 106
>gi|154274908|ref|XP_001538305.1| proteasome component PRE2 precursor [Ajellomyces capsulatus NAm1]
gi|150414745|gb|EDN10107.1| proteasome component PRE2 precursor [Ajellomyces capsulatus NAm1]
Length = 283
Score = 42.8 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ +K+ H TT L R G +++A D + + G + +KV + ++ A
Sbjct: 56 HSNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMA 114
Query: 63 GSSADA 68
G +AD
Sbjct: 115 GGAADC 120
>gi|259484729|tpe|CBF81200.1| TPA: hypothetical proteasome beta 7 subunit (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 260
Score = 42.8 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+++ V+ +G V IA D S G + +++R+ G +I GF+G +D +
Sbjct: 40 GTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLRKFGDAAVI-GFSGDVSDMQYIDRL 98
Query: 75 LEKK 78
LE
Sbjct: 99 LESI 102
>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
vulcanius M7]
gi|302595760|sp|C9REN7|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
vulcanius M7]
Length = 223
Score = 42.8 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 15/186 (8%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M TT + + D V++A D + S+G + A+K+ ++ I AGS DA ++
Sbjct: 4 MKGTTTVGLICDDAVILATDKRASMGNLIADKEAKKLYKI-DDYIAMTIAGSVGDAQAIV 62
Query: 73 ERLEK-----KLEQYPNQLLRSSVE-LAKDWRMDKYLRNLEAMIL----IADKTITLVIT 122
L K+ N R+ L+ + L +I+ + D +
Sbjct: 63 RALIAEARLYKMRTGKNISPRACATLLSNILHSSRMFPFLTQIIIGGYDLTDGPKLFSLD 122
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
+G + E E + GSG A A S EE +A KA+ A + Y+ +
Sbjct: 123 PLGGMNE-EKTFTSTGSGSPIAYGVLEAEYDRDMSIEEGLKLALKALKSAMERDTYSGNG 181
Query: 180 IVLETL 185
+ + +
Sbjct: 182 VSVAVI 187
>gi|195347018|ref|XP_002040051.1| GM15565 [Drosophila sechellia]
gi|194135400|gb|EDW56916.1| GM15565 [Drosophila sechellia]
Length = 315
Score = 42.8 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 25/170 (14%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + G V++ D + + GQ + RK+ L ++ AG +AD
Sbjct: 70 HGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVEL-NDYMLGTLAGGAADCVYWDR 128
Query: 74 RLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEA-----------MILIADKTITL 119
L K+ + QL R +V+ A + + N+ M+ D
Sbjct: 129 VLAKECRLH--QLRYRKRMTVDTAA-----RIICNISTEYKGMGLVMGMMLAGFDDEGPK 181
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
+I + + V ++GSG YAL S A ++AR+A+
Sbjct: 182 LIYVDSEGMISHGQVFSVGSGSPYALGVLDTGYRYDLSDQEAYDLARRAI 231
>gi|148678311|gb|EDL10258.1| proteosome (prosome, macropain) subunit, beta type 9 (large
multifunctional peptidase 2), isoform CRA_b [Mus
musculus]
Length = 219
Score = 42.8 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 13/155 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G V+ K+ L + +I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQ-HIFCALSGSAADAQAIADM 78
Query: 75 LEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGM--G 125
+LE + + L+ ++ + K+ KY +L A +++A D+ + G G
Sbjct: 79 AAYQLELHGLELEEPPLVLAAANVVKN-ISYKYREDLLAHLIVAGWDQREGGQVYGTMGG 137
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
++ GSG SY A + EE
Sbjct: 138 MLIR--QPFTIGGSGSSYIYGYVDAAYKPGMTPEE 170
>gi|67539226|ref|XP_663387.1| hypothetical protein AN5783.2 [Aspergillus nidulans FGSC A4]
gi|40743686|gb|EAA62876.1| hypothetical protein AN5783.2 [Aspergillus nidulans FGSC A4]
Length = 551
Score = 42.8 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+++ V+ +G V IA D S G + +++R+ G +I GF+G +D +
Sbjct: 331 GTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLRKFGDAAVI-GFSGDVSDMQYIDRL 389
Query: 75 LEKK 78
LE
Sbjct: 390 LESI 393
>gi|302414704|ref|XP_003005184.1| proteasome component PRE2 [Verticillium albo-atrum VaMs.102]
gi|261356253|gb|EEY18681.1| proteasome component PRE2 [Verticillium albo-atrum VaMs.102]
Length = 286
Score = 42.8 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ +K+ H TT L R G +++A D + + G + +KV + ++ AG
Sbjct: 60 SNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSVLLGTMAG 118
Query: 64 SSADAFTLLERLEKKLEQY 82
+AD L L + +
Sbjct: 119 GAADCQYWLAWLGMQCRLH 137
>gi|167043167|gb|ABZ07876.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_ANIW141J13]
Length = 208
Score = 42.8 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT + ++ VV+ D + S G + N K++++ ++ AG ADA L
Sbjct: 8 LHGTTTVGIKASDGVVLCADMRASAGYFIANNNTMKIQKIY-DHVGLTLAGGVADAQNLT 66
Query: 73 ERL 75
+ L
Sbjct: 67 DIL 69
>gi|169769577|ref|XP_001819258.1| proteasome subunit beta type-4 [Aspergillus oryzae RIB40]
gi|83767117|dbj|BAE57256.1| unnamed protein product [Aspergillus oryzae]
Length = 260
Score = 42.8 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+++ V+ +G V IA D S G + +++R + + + GF+G +D +
Sbjct: 40 GTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLR-VFGDSAVVGFSGDVSDMQYIDRL 98
Query: 75 LEK--KLEQYP--NQLLRS 89
LE E Y ++ +
Sbjct: 99 LESLDIRENYSTHGNMMNA 117
>gi|224473815|gb|ACN49156.1| proteasome beta 9 like subunit [Oryzias dancena]
Length = 217
Score = 42.8 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TTIL DG VVI D + S+ G+ V KV ++ I AGS ADA + +
Sbjct: 16 GTTILAAVFDGGVVIGSDSRASMGGEFVSSKTINKVIQV-HDRIFCCMAGSLADAQAVTK 74
Query: 74 RLEKKLEQYPNQ-----LLRSSVELAKDW---RMDKYLRNLEAMILIA--DKT---ITLV 120
+ +L + Q L+ ++ + K+ D L+A + A DK V
Sbjct: 75 TAKFQLSFHSVQMENPPLVIAAASILKELCYNNKD----ELQAGFITAGWDKKKGPQVYV 130
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
++ G ++ V GSG +Y A + EE A A+++A
Sbjct: 131 VSLGGMLI--SQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALA 180
>gi|289617136|emb|CBI56204.1| unnamed protein product [Sordaria macrospora]
Length = 274
Score = 42.8 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 21/164 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + AG AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHFISPNIWCAG-AGTAADTEFTTAL 87
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TG 123
+ +LE + + R + + L K + +Y ++ A +++A T + G
Sbjct: 88 ISSQLELHSLSTGRKPRVVTCMTLLKQ-HLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
D L + +GSG AA ++ TQ + +AM
Sbjct: 147 STDKL----PYVTMGSGSL----AAMSVFETQWKPQLTKEEAMK 182
>gi|150400310|ref|YP_001324077.1| proteasome endopeptidase complex [Methanococcus vannielii SB]
gi|302595790|sp|A6USJ3|PSB_METVS RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|150013013|gb|ABR55465.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
Length = 219
Score = 42.8 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 2 VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
++ G +++ M TT + + + VV+A D + ++G + A+K+ ++ I
Sbjct: 1 MISGSEYHKEYMKGTTTVGLICEDGVVLATDKRATMGNLIADKEAKKLYKI-DDYIAMTI 59
Query: 62 AGSSADAFTLLERLEKKLEQYP 83
AGS DA +L+ L + + Y
Sbjct: 60 AGSVGDAQSLIRLLSAEAKIYK 81
>gi|240278169|gb|EER41676.1| proteasome component PRE2 [Ajellomyces capsulatus H143]
gi|325096234|gb|EGC49544.1| proteasome component [Ajellomyces capsulatus H88]
Length = 283
Score = 42.4 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ +K+ H TT L R G +++A D + + G + +KV + ++ A
Sbjct: 56 HSNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMA 114
Query: 63 GSSADA 68
G +AD
Sbjct: 115 GGAADC 120
>gi|238488108|ref|XP_002375292.1| proteasome component Pre4, putative [Aspergillus flavus NRRL3357]
gi|220700171|gb|EED56510.1| proteasome component Pre4, putative [Aspergillus flavus NRRL3357]
Length = 260
Score = 42.4 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+++ V+ +G V IA D S G + +++R + + + GF+G +D +
Sbjct: 40 GTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLR-VFGDSAVVGFSGDVSDMQYIDRL 98
Query: 75 LEK--KLEQYP--NQLLRS 89
LE E Y ++ +
Sbjct: 99 LESLDIRENYSTHGNMMNA 117
>gi|224090541|ref|XP_002309021.1| predicted protein [Populus trichocarpa]
gi|222854997|gb|EEE92544.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 42.4 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 33/179 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L + +GS+AD+ T+ +
Sbjct: 16 GTTIIGVTYNGGVVLGADSRTSTGIYVANRASDKITQLTDNVYLC-RSGSAADSQTVSDY 74
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT---LVITG-------- 123
+ L Q+ QL + + K NL ++ ++K + ++I G
Sbjct: 75 VRYFLHQHTIQLGQPA--------TVKVAANLVRLLSYSNKNMLQTGMIIGGWDKYEGGK 126
Query: 124 ------MGDVLEPENGVMAIGSGGSYALS---AARALMSTQNSAEEIARKA--MSIAAD 171
G +LE GSG +Y A TQ AE++ KA ++IA D
Sbjct: 127 IYGVPLGGTLLE--LPFTIGGSGSTYLYGFFDQAWKEGMTQEEAEQLVVKAVSLAIARD 183
>gi|91788532|ref|YP_549484.1| 20S proteasome subunits A/B [Polaromonas sp. JS666]
gi|91697757|gb|ABE44586.1| 20S proteasome, A and B subunits [Polaromonas sp. JS666]
Length = 197
Score = 42.4 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 49/193 (25%), Positives = 79/193 (40%), Gaps = 36/193 (18%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKA----NAR--KVRRLGKGNIIAGFAGSSADAF 69
TT++ V+K G + IA D V+ G T + N++ KV G G AG+ A
Sbjct: 2 TTLVVVKKAGQIAIAADTLVTFGDTSLTHRFEANSKIFKVDAPVVGTSYIGMAGTVAHFP 61
Query: 70 TLL-----------------ERLEKKLEQYPNQLLRSSVEL-AKDWRMDKYLRNLEAMIL 111
L E + ++ +P LL+ + L K+ D Y + + ++
Sbjct: 62 ALRKAMSALAKEDLKLGSRDEVFDTFIKLHP--LLKDTFFLQTKEDDNDPY-ESSQFTVV 118
Query: 112 IADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI--- 168
IA+ + + +V E + IGSG S+AL A A +A E+A M+
Sbjct: 119 IANASGIYGLYSYREVFEFKE-FWGIGSGRSFALGAMHACWDKARTAREVALAGMNAGCE 177
Query: 169 -----AADICVYT 176
A I V+T
Sbjct: 178 FDKNSAGPIEVFT 190
>gi|261199568|ref|XP_002626185.1| proteasome component PRE2 [Ajellomyces dermatitidis SLH14081]
gi|239594393|gb|EEQ76974.1| proteasome component PRE2 [Ajellomyces dermatitidis SLH14081]
gi|239615558|gb|EEQ92545.1| proteasome component PRE2 [Ajellomyces dermatitidis ER-3]
gi|327354709|gb|EGE83566.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
Length = 283
Score = 42.4 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ +K+ H TT L R G +++A D + + G + +KV + ++ A
Sbjct: 56 HANPDCPIKIAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMA 114
Query: 63 GSSADA 68
G +AD
Sbjct: 115 GGAADC 120
>gi|195454741|ref|XP_002074381.1| GK10550 [Drosophila willistoni]
gi|194170466|gb|EDW85367.1| GK10550 [Drosophila willistoni]
Length = 272
Score = 42.4 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ L + G AG++AD +
Sbjct: 39 GTTIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHYLAQNIYCCG-AGTAADTEMTTDL 97
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILI--ADKT--ITLVI--TG 123
+ +LE + R ++ + K + +Y ++ A +++ DKT I G
Sbjct: 98 ISSQLELHRLNTNRQVRVVAANMMLKQ-MLFRYQGHISAALVLGGVDKTGPHLYSIHPHG 156
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
D L +GSG A+S + S E+ + R A IA+ I
Sbjct: 157 SSDKL----PYATMGSGSLAAMSVFESRWKPNMSEEDGKLLVRDA--IASGI 202
>gi|157136298|ref|XP_001656819.1| proteasome subunit beta type 7,10 [Aedes aegypti]
gi|108881087|gb|EAT45312.1| proteasome subunit beta type 7,10 [Aedes aegypti]
Length = 280
Score = 42.4 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ L K G AG++AD +
Sbjct: 39 GTTIVGIIYKDGVILGADTRATEGPIVADKNCEKIHYLAKNMYCCG-AGTAADTEMTTQM 97
Query: 75 LEKKLEQYPNQLLR 88
+ LE + R
Sbjct: 98 IASNLELHRLNTGR 111
>gi|164658982|ref|XP_001730616.1| hypothetical protein MGL_2412 [Malassezia globosa CBS 7966]
gi|159104512|gb|EDP43402.1| hypothetical protein MGL_2412 [Malassezia globosa CBS 7966]
Length = 295
Score = 42.4 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G VV+A D + S G + + +KV + ++ AG +AD
Sbjct: 60 HGTTTLAFRYKGGVVVAVDSRASAGSYIASGSVKKVIEINPY-LLGTMAGGAADC 113
>gi|328768690|gb|EGF78736.1| hypothetical protein BATDEDRAFT_17403 [Batrachochytrium
dendrobatidis JAM81]
Length = 248
Score = 42.4 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +V+ D + + G V N K+ L G AG++AD
Sbjct: 16 GTTIVGVVYKDGIVLGADTRATAGPIVADKNCEKIHYLAPNMYCCG-AGTAADTEFTTAL 74
Query: 75 LEKKLEQYPNQLLR 88
+ KLE + Q R
Sbjct: 75 ISSKLELHSLQTGR 88
>gi|240103778|ref|YP_002960087.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595756|sp|C5A7L1|PSB1_THEGJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome
core protein PsmB 1; Flags: Precursor
gi|239911332|gb|ACS34223.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 201
Score = 42.4 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
M TT + V VV+A D + +LG V KV ++ IAG AG D
Sbjct: 4 SPSAMKGTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQIDDHLAIAG-AGLVGDI 62
Query: 69 FTLLERLEKKLEQYPNQLLR 88
+L+ L + + Y ++ R
Sbjct: 63 LSLVRLLRAEAKLYRAKVGR 82
>gi|15897668|ref|NP_342273.1| proteasome subunit [Sulfolobus solfataricus P2]
gi|284174993|ref|ZP_06388962.1| proteasome subunit [Sulfolobus solfataricus 98/2]
gi|6015710|emb|CAB57537.1| proteasome, beta subunit [Sulfolobus solfataricus P2]
gi|13813939|gb|AAK41063.1| Proteasome subunit [Sulfolobus solfataricus P2]
gi|261602436|gb|ACX92039.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
solfataricus 98/2]
Length = 225
Score = 42.4 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 22/181 (12%)
Query: 1 MVVMGDKHYAVK--MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNI 57
MV+MG++ + TT + +R + V++A D + S G V RKV L I
Sbjct: 15 MVIMGNELQLENKILKGTTTVGIRVNDGVILAADRRASAGFFVANKMVRKV--LYITDKI 72
Query: 58 IAGFAGSSADAFTLLERLEKKLEQYPNQLLR--------SSVELAKDWRMDKYLRNLEAM 109
AGS AD + + L+ + N + + + LA KY + +
Sbjct: 73 GITTAGSVADLQFIYDVLKNIY--HYNSITKYGPISIKGIATRLANVLSATKYFPYIVQI 130
Query: 110 ILIA--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARK 164
++ D+ + +GD+ E +A GSG A+ + T + A ++A++
Sbjct: 131 LIGGYDDQPRLFNLDYLGDITE--ENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKR 188
Query: 165 A 165
A
Sbjct: 189 A 189
>gi|251773198|gb|EES53750.1| putative 20S proteasome beta-subunit [Leptospirillum
ferrodiazotrophum]
Length = 275
Score = 42.4 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TTIL V++AGD + + +M K+ + G+ + +GS A A +
Sbjct: 52 HGTTILAFHFSEGVLVAGDRRATASNRIMSNRVDKILEI-DGSALLAISGSPAMALEMGR 110
Query: 74 RLEKKLEQYP 83
L+ L+ Y
Sbjct: 111 ILDHSLKFYR 120
>gi|124485835|ref|YP_001030451.1| hypothetical protein Mlab_1015 [Methanocorpusculum labreanum Z]
gi|302595748|sp|A2SS78|PSB_METLZ RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|124363376|gb|ABN07184.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
Length = 212
Score = 42.4 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M +H VK TT + + DG V++A + + ++G + A+KV + I AG
Sbjct: 1 MSQEHQDVKT-GTTTVGIVFDGGVILATERRATMGNLIASKKAKKVHAI-TDKIGMTIAG 58
Query: 64 SSADAFTL 71
DA L
Sbjct: 59 GVGDAQQL 66
>gi|229820725|ref|YP_002882251.1| 20S proteasome A and B subunits [Beutenbergia cavernae DSM 12333]
gi|302595821|sp|C5BVA2|PSB_BEUC1 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|229566638|gb|ACQ80489.1| 20S proteasome A and B subunits [Beutenbergia cavernae DSM 12333]
Length = 272
Score = 42.4 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
HATTI+ + G +V+AGD + ++G + R++ ++ G+ G AG++ L
Sbjct: 46 HATTIVALSFAGGIVMAGDRRATMGSFIAH---REIEKVFPGDEYSAIGIAGTAGIGVEL 102
Query: 72 LERLEKKLEQY 82
+ + +LE +
Sbjct: 103 VRLFQLELEHF 113
>gi|256085670|ref|XP_002579037.1| proteasome catalytic subunit 3 (T01 family) [Schistosoma mansoni]
gi|238664440|emb|CAZ35276.1| proteasome catalytic subunit 3 (T01 family) [Schistosoma mansoni]
Length = 518
Score = 42.4 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L ++ G V++A D + + G + +K+ + K ++ AG +AD
Sbjct: 60 FHGTTTLALKYSGGVIVATDSRATAGPYIASGTTKKIIEINKY-LLGTMAGGAADC 114
>gi|195488383|ref|XP_002092291.1| GE14105 [Drosophila yakuba]
gi|194178392|gb|EDW92003.1| GE14105 [Drosophila yakuba]
Length = 224
Score = 42.4 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G V K+ R+ + +GS+AD + +
Sbjct: 15 GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRI-TDKVYCCRSGSAADTQAIADI 73
Query: 75 LEKKLEQYPNQLLRSSV--ELAKDWR 98
+ L + NQ + ++ E A ++R
Sbjct: 74 VAYSLNYHENQTNKEALVFEAASEFR 99
>gi|194882671|ref|XP_001975434.1| GG22308 [Drosophila erecta]
gi|190658621|gb|EDV55834.1| GG22308 [Drosophila erecta]
Length = 224
Score = 42.4 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G V K+ R+ + +GS+AD + +
Sbjct: 15 GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRI-TDKVYCCRSGSAADTQAIADI 73
Query: 75 LEKKLEQYPNQLLRSSV--ELAKDWR 98
+ L + NQ + ++ E A ++R
Sbjct: 74 VAYSLNYHENQTNKEALVFEAASEFR 99
>gi|118789882|ref|XP_317882.3| AGAP011423-PA [Anopheles gambiae str. PEST]
gi|116122785|gb|EAA13087.3| AGAP011423-PA [Anopheles gambiae str. PEST]
Length = 279
Score = 42.4 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + V++ D + + G V N K+ L K G AG++AD +
Sbjct: 39 GTTICGIIYKDGVILGADTRATEGPIVADKNCEKIHYLAKNMYCCG-AGTAADTEMTTQM 97
Query: 75 LEKKLEQYPNQLLR 88
+ LE + R
Sbjct: 98 IASNLELHRLNTGR 111
>gi|464445|sp|P28077|PSB9_RAT RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
molecular mass protein 2; AltName: Full=Macropain chain
7; AltName: Full=Multicatalytic endopeptidase complex
chain 7; AltName: Full=Proteasome chain 7; AltName:
Full=Proteasome subunit beta-1i; AltName: Full=Really
interesting new gene 12 protein; Flags: Precursor
gi|286252|dbj|BAA01589.1| proteasome subunit R-RING12 [Rattus sp.]
Length = 219
Score = 42.4 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 13/155 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G V+ K+ L + I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQ-RIYCALSGSAADAQAIADM 78
Query: 75 LEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGM--G 125
+LE + + L+ ++ + K+ KY +L A +++A D+ + G G
Sbjct: 79 AAYQLELHGLELEEPPLVLAAANIVKN-ISYKYREDLLAHLMVAGWDQHEGGQVYGTMGG 137
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
++ GSG +Y A + EE
Sbjct: 138 MLIR--QPFAIGGSGSTYIYGYVDAAYKPGMTPEE 170
>gi|225714540|gb|ACO13116.1| Proteasome subunit beta type-7 precursor [Lepeophtheirus salmonis]
gi|290462259|gb|ADD24177.1| Proteasome subunit beta type-7 [Lepeophtheirus salmonis]
gi|290562549|gb|ADD38670.1| Proteasome subunit beta type-7 [Lepeophtheirus salmonis]
Length = 272
Score = 42.4 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + +V D + + G + K+ L + G AG SAD + E
Sbjct: 39 GTTICALIYKDGIVFGADNRATAGNIIANKFTLKIHELAPNIVACG-AGVSADCDKVTEL 97
Query: 75 LEKKLEQYP 83
L +L+ +
Sbjct: 98 LASQLKLHR 106
>gi|195380597|ref|XP_002049057.1| GJ20967 [Drosophila virilis]
gi|194143854|gb|EDW60250.1| GJ20967 [Drosophila virilis]
Length = 312
Score = 42.4 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 14/173 (8%)
Query: 7 KHYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+H V+M H TT L + G +V+ D + + G+ + +K+ L ++ AG
Sbjct: 60 EHCKVRMECDHGTTTLGFKYQGGIVLCADSRATSGEYIGSQTMKKIVEL-NSYMLGTLAG 118
Query: 64 SSADAFTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMD-KYLRNLEAMILI-ADKT 116
+AD L ++ + + R ++ + + K + + M+L D
Sbjct: 119 GAADCVYWDRVLARECRLHELRYKRRITVDAAARMMCNISTQYKGMGLVMGMMLAGCDDE 178
Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAM 166
+I D + V ++GSG YAL T + A ++AR+A+
Sbjct: 179 GCKLIYVDSDGMRSHGSVFSVGSGSPYALGVLDTGYRWDLTTDEAFDLARRAI 231
>gi|317032170|ref|XP_001394180.2| proteasome component PRE2 [Aspergillus niger CBS 513.88]
Length = 296
Score = 42.4 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 18/84 (21%)
Query: 3 VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK---VRRLGK 54
M D H +K+ H TT L R G +++A D + + G + +K V RL +
Sbjct: 51 AMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSR 110
Query: 55 GN----------IIAGFAGSSADA 68
G ++ AG +AD
Sbjct: 111 GEDKPSNEPTPGLLGTMAGGAADC 134
>gi|159124282|gb|EDP49400.1| proteasome component Pre2, putative [Aspergillus fumigatus A1163]
Length = 296
Score = 42.4 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 18/84 (21%)
Query: 3 VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK---VRRLGK 54
M D H +K+ H TT L R G +++A D + + G + +K V RL +
Sbjct: 51 AMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSR 110
Query: 55 GN----------IIAGFAGSSADA 68
G ++ AG +AD
Sbjct: 111 GEDKKQDTPVPGLLGTMAGGAADC 134
>gi|119469453|ref|XP_001257946.1| proteasome component Pre2, putative [Neosartorya fischeri NRRL 181]
gi|119406098|gb|EAW16049.1| proteasome component Pre2, putative [Neosartorya fischeri NRRL 181]
Length = 296
Score = 42.4 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 18/84 (21%)
Query: 3 VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK---VRRLGK 54
M D H +K+ H TT L R G +++A D + + G + +K V RL +
Sbjct: 51 AMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSR 110
Query: 55 GN----------IIAGFAGSSADA 68
G ++ AG +AD
Sbjct: 111 GEDKKQDTPVPGLLGTMAGGAADC 134
>gi|121699289|ref|XP_001267971.1| proteasome component Pre2, putative [Aspergillus clavatus NRRL 1]
gi|119396113|gb|EAW06545.1| proteasome component Pre2, putative [Aspergillus clavatus NRRL 1]
Length = 296
Score = 42.4 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 18/84 (21%)
Query: 3 VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK---VRRLGK 54
M D H +K+ H TT L R G +++A D + + G + +K V RL +
Sbjct: 51 AMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSR 110
Query: 55 GN----------IIAGFAGSSADA 68
G ++ AG +AD
Sbjct: 111 GEDKKQNAPVPGLLGTMAGGAADC 134
>gi|115398830|ref|XP_001215004.1| proteasome component PRE2 precursor [Aspergillus terreus NIH2624]
gi|114191887|gb|EAU33587.1| proteasome component PRE2 precursor [Aspergillus terreus NIH2624]
Length = 296
Score = 42.4 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 18/84 (21%)
Query: 3 VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK---VRRLGK 54
M D H +K+ H TT L R G +++A D + + G + +K V RL +
Sbjct: 51 AMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSR 110
Query: 55 GN----------IIAGFAGSSADA 68
G ++ AG +AD
Sbjct: 111 GEDKPTDAPTPGLLGTMAGGAADC 134
>gi|169769717|ref|XP_001819328.1| proteasome component PRE2 [Aspergillus oryzae RIB40]
gi|238487964|ref|XP_002375220.1| proteasome component Pre2, putative [Aspergillus flavus NRRL3357]
gi|83767187|dbj|BAE57326.1| unnamed protein product [Aspergillus oryzae]
gi|220700099|gb|EED56438.1| proteasome component Pre2, putative [Aspergillus flavus NRRL3357]
Length = 296
Score = 42.4 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 18/84 (21%)
Query: 3 VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK---VRRLGK 54
M D H +K+ H TT L R G +++A D + + G + +K V RL +
Sbjct: 51 AMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSR 110
Query: 55 GN----------IIAGFAGSSADA 68
G ++ AG +AD
Sbjct: 111 GEDKANNAPTPGLLGTMAGGAADC 134
>gi|45358258|ref|NP_987815.1| proteasome subunit beta [Methanococcus maripaludis S2]
gi|74555067|sp|Q6LZD4|PSB_METMP RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|44921015|emb|CAF30251.1| proteasome, subunit beta [Methanococcus maripaludis S2]
Length = 219
Score = 42.4 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M+ + H M TT + + + VV+A D + ++G + A+K+ ++ I
Sbjct: 1 MISNSEYHKEY-MKGTTTVGLLCNDGVVLATDKRATMGNLIADKEAKKLYKI-DDYIAMT 58
Query: 61 FAGSSADAFTLLERLEKKLEQYP 83
AGS DA +L+ + + + Y
Sbjct: 59 IAGSVGDAQSLIRLISAEAKIYK 81
>gi|70991743|ref|XP_750720.1| proteasome component Pre2 [Aspergillus fumigatus Af293]
gi|66848353|gb|EAL88682.1| proteasome component Pre2, putative [Aspergillus fumigatus Af293]
Length = 296
Score = 42.4 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 18/84 (21%)
Query: 3 VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK---VRRLGK 54
M D H +K+ H TT L R G +++A D + + G + +K V RL +
Sbjct: 51 AMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSR 110
Query: 55 GN----------IIAGFAGSSADA 68
G ++ AG +AD
Sbjct: 111 GEDKKQDTPVPGLLGTMAGGAADC 134
>gi|118482133|gb|ABK92997.1| unknown [Populus trichocarpa]
Length = 227
Score = 42.4 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 33/179 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L + +GS+AD+ T+ +
Sbjct: 16 GTTIIGVTYNGGVVLGADSRTSTGIYVANRASDKITQLTDNVYLC-RSGSAADSQTVSDY 74
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT---LVITG-------- 123
+ L Q+ QL + + K NL ++ ++K + ++I G
Sbjct: 75 VRYFLHQHTIQLGQPA--------TVKVAANLVRLLSYSNKNMLQTGMIIGGWDKYEGGK 126
Query: 124 ------MGDVLEPENGVMAIGSGGSYALS---AARALMSTQNSAEEIARKA--MSIAAD 171
G +LE GSG +Y A TQ AE++ KA ++IA D
Sbjct: 127 IYGVPLGGTLLE--LPFTIGGSGSTYLYGFFDQAWKEGMTQEEAEQLVVKAVSLAIARD 183
>gi|302595900|sp|D0KTH0|PSB2_SULS9 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
Length = 211
Score = 42.4 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 22/181 (12%)
Query: 1 MVVMGDKHYAVK--MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNI 57
MV+MG++ + TT + +R + V++A D + S G V RKV L I
Sbjct: 1 MVIMGNELQLENKILKGTTTVGIRVNDGVILAADRRASAGFFVANKMVRKV--LYITDKI 58
Query: 58 IAGFAGSSADAFTLLERLEKKLEQYPNQLLR--------SSVELAKDWRMDKYLRNLEAM 109
AGS AD + + L+ + N + + + LA KY + +
Sbjct: 59 GITTAGSVADLQFIYDVLKNIY--HYNSITKYGPISIKGIATRLANVLSATKYFPYIVQI 116
Query: 110 ILIA--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARK 164
++ D+ + +GD+ E +A GSG A+ + T + A ++A++
Sbjct: 117 LIGGYDDQPRLFNLDYLGDITE--ENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKR 174
Query: 165 A 165
A
Sbjct: 175 A 175
>gi|296803825|ref|XP_002842765.1| proteasome component PRE2 [Arthroderma otae CBS 113480]
gi|238846115|gb|EEQ35777.1| proteasome component PRE2 [Arthroderma otae CBS 113480]
Length = 283
Score = 42.4 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+ +K+ H TT L R G +++A D + + G + +KV + ++ A
Sbjct: 55 HSNPDCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMA 113
Query: 63 GSSADA 68
G +AD
Sbjct: 114 GGAADC 119
>gi|258614009|ref|NP_036840.2| proteasome subunit beta type-9 [Rattus norvegicus]
gi|46237560|emb|CAE83940.1| proteasome (prosome, macropain) subunit, beta type, 9 [Rattus
norvegicus]
gi|60688585|gb|AAH91161.1| Proteasome (prosome, macropain) subunit, beta type 9 (large
multifunctional peptidase 2) [Rattus norvegicus]
gi|149043360|gb|EDL96811.1| proteosome (prosome, macropain) subunit, beta type 9 [Rattus
norvegicus]
Length = 219
Score = 42.4 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G V+ K+ L + I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQ-RIYCALSGSAADAQAIADM 78
>gi|227827648|ref|YP_002829428.1| proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|227830344|ref|YP_002832124.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
islandicus L.S.2.15]
gi|229579161|ref|YP_002837559.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|229584852|ref|YP_002843354.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238619816|ref|YP_002914642.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284997769|ref|YP_003419536.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|302595712|sp|D2PK63|PSB1_SULID RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595725|sp|C4KHB0|PSB1_SULIK RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595727|sp|C3MQ16|PSB1_SULIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595742|sp|C3MVD5|PSB1_SULIM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595747|sp|C3N5N4|PSB1_SULIA RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595752|sp|C3NE98|PSB1_SULIY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|227456792|gb|ACP35479.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
islandicus L.S.2.15]
gi|227459444|gb|ACP38130.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228009875|gb|ACP45637.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|228019902|gb|ACP55309.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238380886|gb|ACR41974.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284445664|gb|ADB87166.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
Length = 211
Score = 42.0 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 22/181 (12%)
Query: 1 MVVMGDKHYAVK--MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNI 57
MV+MG++ + TT + ++ + VV+A D + S G V RKV L I
Sbjct: 1 MVIMGNELQLENKILKGTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKV--LYITDKI 58
Query: 58 IAGFAGSSADAFTLLERLEKKLEQYPNQLLR--------SSVELAKDWRMDKYLRNLEAM 109
AGS AD + + L+ + N + + + LA KY + +
Sbjct: 59 GITTAGSVADLQFIYDVLKNIY--HYNSITKYGPISIKGIATRLANVLSATKYFPYIVQI 116
Query: 110 ILIA--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARK 164
++ D+ + +GD+ E +A GSG A+ + T + A ++A++
Sbjct: 117 LIGGYDDQPRLFNLDYLGDITE--ENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKR 174
Query: 165 A 165
A
Sbjct: 175 A 175
>gi|8117714|gb|AAF72737.1|AF097521_1 proteasome B type subunit [Cryptosporidium parvum]
Length = 210
Score = 42.0 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 70/176 (39%), Gaps = 35/176 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ ++ +V+A DG+ S G + ARK+ ++ + +GS+AD +
Sbjct: 13 GTTIVALKYKDGLVLAADGRTSTGPIIAFRAARKITQI-TDKVFMCRSGSAADTQIISRY 71
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITG-------- 123
+ + ++ + +E +D ++ K + ++ +I +K L +I G
Sbjct: 72 VRRIVQDHE-------LETGEDTKV-KSVASVARLISYQNKEHLLADMIIAGMDPNGEFK 123
Query: 124 ------MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-------AEEIARKAM 166
G ++E GSG Y S + ++ A ++ AM
Sbjct: 124 VFRIPLGGTLIE--GSYAISGSGSGYIYSMLDSKYHSEMDLDECKSFARDLVSHAM 177
>gi|195447860|ref|XP_002071403.1| GK25153 [Drosophila willistoni]
gi|194167488|gb|EDW82389.1| GK25153 [Drosophila willistoni]
Length = 353
Score = 42.0 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 31/185 (16%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + + V++ D + + G V N K+ RL G AG++AD L +
Sbjct: 50 GTSIVGIIYENGVILGADTRATEGPIVSDKNCSKIHRLQDYIYCCG-AGTAADTEHLTQM 108
Query: 75 LEKKLEQYPNQLLRSSVEL---AKDWRMD--KYLRNLEAMILI--ADKT--ITLVI--TG 123
+L+ + + R V + ++ R +Y ++ A +++ DK I G
Sbjct: 109 TSSELDLHRLNINRERVPVVCASRMMRSTLFRYQGHISAALVMGGVDKAGPQIYCIYPCG 168
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAA---------- 170
D + A+GSG A+S Q S +E + R+A+S A
Sbjct: 169 SNDKI----PYAAMGSGTLAAMSVLEHGWHAQLSLDEGKQLVREAIS-AGVFNDLGSGSN 223
Query: 171 -DICV 174
D+CV
Sbjct: 224 IDMCV 228
>gi|148694875|gb|EDL26822.1| proteasome (prosome, macropain) subunit, beta type 7, isoform CRA_b
[Mus musculus]
Length = 284
Score = 42.0 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 50 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 108
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 109 ISSNLELHSLTTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 157
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 158 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGI 213
>gi|17945936|gb|AAL49013.1| RE44901p [Drosophila melanogaster]
Length = 224
Score = 42.0 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G V K+ R+ + +GS+AD + +
Sbjct: 15 GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRI-TDKVYCCRSGSAADTQAIADI 73
Query: 75 LEKKLEQYPNQLLRSSV--ELAKDWR 98
+ L + NQ + ++ E A ++R
Sbjct: 74 VAYSLNYHENQTNKDALVFEAASEFR 99
>gi|307106214|gb|EFN54460.1| hypothetical protein CHLNCDRAFT_31571 [Chlorella variabilis]
Length = 225
Score = 42.0 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT++ V DG VV+ D +VS G + + K+ L N+ +GS+AD + +
Sbjct: 17 GTTVVAVCFDGGVVVGADSRVSTGTYISNRASDKITPLA-DNVYLLRSGSAADTQAVADY 75
Query: 75 LEKKLEQYPNQLLR 88
+ EQ+ QL R
Sbjct: 76 VRYFTEQHEMQLQR 89
>gi|225716364|gb|ACO14028.1| Proteasome subunit beta type-7 precursor [Esox lucius]
Length = 277
Score = 42.0 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 63/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTICGVVFKDGIVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQI 101
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNL--------EAMILI----ADKTITL 119
+ LE + +L R + ++ L+ + A +++ +
Sbjct: 102 ISSNLELHSLSTGRLPRVATA-------NRMLKQMLFRYQGHIGAALVLGGVDCNGPHLY 154
Query: 120 VI--TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
I G D L + +GSG A++ A+ + R A IAA I
Sbjct: 155 SIYPHGSTDKL----PYVTMGSGSLAAMAVFEDRYEQNMEEEDAKRLVRDA--IAAGI 206
>gi|318085399|ref|NP_001187550.1| proteasome subunit beta type-7 [Ictalurus punctatus]
gi|308323333|gb|ADO28803.1| proteasome subunit beta type-7 [Ictalurus punctatus]
Length = 277
Score = 42.0 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V V++ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTICGVVYKDGVILGADTRATEGMVVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQL 101
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNL--------EAMILI----ADKTITL 119
+ LE + N+L R + ++ L+ + A +++ +
Sbjct: 102 ISSNLELHSLSTNRLPRVATA-------NRMLKQMLFRYRGYIGAALVLGGVDCNGPHLY 154
Query: 120 VI--TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
I G D L + +GSG A++ EE + R A IAA I
Sbjct: 155 SIYPHGSTDKL----PYVTMGSGSLAAMAVFEDRYRPDLEEEEAKLLVRDA--IAAGI 206
>gi|114626636|ref|XP_001140922.1| PREDICTED: proteasome beta 7 subunit isoform 2 [Pan troglodytes]
Length = 278
Score = 42.0 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 35/179 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE----------NGVMAIGSGGSYALSAARALMST------QNSAEEIARKAMSIAADI 172
P + + + GGS +L+A + A+ + +A IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGI 207
>gi|29351589|gb|AAH49230.1| Psmb7 protein [Mus musculus]
Length = 276
Score = 42.0 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 42 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 100
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 101 ISSNLELHSLTTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 149
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 150 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGI 205
>gi|159469772|ref|XP_001693037.1| 20S proteasome beta subunit A2 [Chlamydomonas reinhardtii]
gi|158277839|gb|EDP03606.1| 20S proteasome beta subunit A2 [Chlamydomonas reinhardtii]
Length = 241
Score = 42.0 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ G VV+ DG+VS+G +M + K+ L + + +GS+ D + +
Sbjct: 17 GTTIVACTYKGGVVLGADGRVSIGNYIMNRASNKIAPLAEYIFLC-RSGSAPDTQVISDN 75
Query: 75 LEKKLEQ 81
++ L+Q
Sbjct: 76 VKHYLDQ 82
>gi|195334769|ref|XP_002034049.1| GM20098 [Drosophila sechellia]
gi|194126019|gb|EDW48062.1| GM20098 [Drosophila sechellia]
Length = 224
Score = 42.0 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G V K+ R+ + +GS+AD + +
Sbjct: 15 GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRI-TDKVYCCRSGSAADTQAIADI 73
Query: 75 LEKKLEQYPNQLLRSSV--ELAKDWR 98
+ L + NQ + ++ E A ++R
Sbjct: 74 VAYSLNYHENQTNKDALVFEAASEFR 99
>gi|74220487|dbj|BAE31463.1| unnamed protein product [Mus musculus]
Length = 219
Score = 42.0 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G V+ K+ L + +I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQ-HIFCALSGSAADAQAIADM 78
>gi|24653999|ref|NP_652031.2| proteasome beta1 subunit [Drosophila melanogaster]
gi|7303007|gb|AAF58077.1| proteasome beta1 subunit [Drosophila melanogaster]
gi|116806936|emb|CAL26894.1| CG8392 [Drosophila melanogaster]
gi|116806938|emb|CAL26895.1| CG8392 [Drosophila melanogaster]
gi|116806940|emb|CAL26896.1| CG8392 [Drosophila melanogaster]
gi|116806942|emb|CAL26897.1| CG8392 [Drosophila melanogaster]
gi|116806944|emb|CAL26898.1| CG8392 [Drosophila melanogaster]
gi|116806946|emb|CAL26899.1| CG8392 [Drosophila melanogaster]
gi|116806948|emb|CAL26900.1| CG8392 [Drosophila melanogaster]
gi|116806950|emb|CAL26901.1| CG8392 [Drosophila melanogaster]
gi|116806952|emb|CAL26902.1| CG8392 [Drosophila melanogaster]
gi|116806954|emb|CAL26903.1| CG8392 [Drosophila melanogaster]
gi|116806956|emb|CAL26904.1| CG8392 [Drosophila melanogaster]
gi|201065949|gb|ACH92384.1| FI07228p [Drosophila melanogaster]
gi|223967797|emb|CAR93629.1| CG8392-PA [Drosophila melanogaster]
gi|223967799|emb|CAR93630.1| CG8392-PA [Drosophila melanogaster]
gi|223967801|emb|CAR93631.1| CG8392-PA [Drosophila melanogaster]
gi|223967803|emb|CAR93632.1| CG8392-PA [Drosophila melanogaster]
gi|223967805|emb|CAR93633.1| CG8392-PA [Drosophila melanogaster]
gi|223967807|emb|CAR93634.1| CG8392-PA [Drosophila melanogaster]
gi|223967809|emb|CAR93635.1| CG8392-PA [Drosophila melanogaster]
gi|223967811|emb|CAR93636.1| CG8392-PA [Drosophila melanogaster]
gi|223967813|emb|CAR93637.1| CG8392-PA [Drosophila melanogaster]
gi|223967815|emb|CAR93638.1| CG8392-PA [Drosophila melanogaster]
gi|223967817|emb|CAR93639.1| CG8392-PA [Drosophila melanogaster]
gi|223967819|emb|CAR93640.1| CG8392-PA [Drosophila melanogaster]
Length = 224
Score = 42.0 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G V K+ R+ + +GS+AD + +
Sbjct: 15 GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRI-TDKVYCCRSGSAADTQAIADI 73
Query: 75 LEKKLEQYPNQLLRSSV--ELAKDWR 98
+ L + NQ + ++ E A ++R
Sbjct: 74 VAYSLNYHENQTNKDALVFEAASEFR 99
>gi|12849471|dbj|BAB28354.1| unnamed protein product [Mus musculus]
Length = 277
Score = 42.0 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLEFHSLTTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGI 206
>gi|16768432|gb|AAL28435.1| GM04535p [Drosophila melanogaster]
Length = 224
Score = 42.0 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G V K+ R+ + +GS+AD + +
Sbjct: 15 GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRI-TDKVYCCRSGSAADTQAIADI 73
Query: 75 LEKKLEQYPNQLLRSSV--ELAKDWR 98
+ L + NQ + ++ E A ++R
Sbjct: 74 VAYSLNYHENQTNKDALVFEAASEFR 99
>gi|8567394|ref|NP_038613.1| proteasome subunit beta type-9 [Mus musculus]
gi|984353|gb|AAA75306.1| 20S proteasome subunit Lmp2 [Mus musculus]
gi|2073368|dbj|BAA19855.1| low-molecular-weight polypeptide 2 [Mus musculus]
gi|2467361|dbj|BAA22582.1| low molecular mass polypeptide complex subunit 2 [Mus musculus
molossinus]
gi|2555189|gb|AAB81528.1| 20S proteasome subunit lmp2 [Mus musculus]
gi|12842607|dbj|BAB25664.1| unnamed protein product [Mus musculus]
Length = 219
Score = 42.0 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G V+ K+ L + +I +GS+ADA + +
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQ-HIFCALSGSAADAQAIADM 78
>gi|226471266|emb|CAX70714.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
Length = 264
Score = 42.0 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + G V++A D + + G + +K+ + K ++ AG +AD
Sbjct: 60 LHGTTTLAFKYSGGVIVAADSRATAGSYIASGTTKKIIEINKY-LLGTMAGGAADC 114
>gi|156086762|ref|XP_001610788.1| proteasome subunit beta 7 [Babesia bovis T2Bo]
gi|154798041|gb|EDO07220.1| proteasome subunit beta 7, putative [Babesia bovis]
Length = 271
Score = 42.0 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+A D + + G V N K+ R+ AG AG +AD
Sbjct: 40 GTTICGVLVKDGVVLAADTRATEGPIVADKNCSKLHRISDFIYCAG-AGVAADLEHTTLW 98
Query: 75 LEKKLEQYPNQL 86
LE +E L
Sbjct: 99 LENNIELLRLNL 110
>gi|6755206|ref|NP_035317.1| proteasome subunit beta type-7 precursor [Mus musculus]
gi|17380252|sp|P70195|PSB7_MOUSE RecName: Full=Proteasome subunit beta type-7; AltName:
Full=Macropain chain Z; AltName: Full=Multicatalytic
endopeptidase complex chain Z; AltName: Full=Proteasome
subunit Z; Flags: Precursor
gi|1632755|dbj|BAA12017.1| proteasome Z subunit precursor [Mus musculus]
gi|2062107|emb|CAA71824.1| proteasome subunti MC14 [Mus musculus]
gi|2547068|dbj|BAA22857.1| proteasome subunit Z [Mus musculus]
gi|12851549|dbj|BAB29085.1| unnamed protein product [Mus musculus]
gi|26344576|dbj|BAC35937.1| unnamed protein product [Mus musculus]
gi|26353242|dbj|BAC40251.1| unnamed protein product [Mus musculus]
gi|26353852|dbj|BAC40556.1| unnamed protein product [Mus musculus]
gi|35505253|gb|AAH57662.1| Proteasome (prosome, macropain) subunit, beta type 7 [Mus musculus]
gi|74223013|dbj|BAE40650.1| unnamed protein product [Mus musculus]
gi|123232474|emb|CAM21926.1| proteasome (prosome, macropain) subunit, beta [Mus musculus]
gi|123233331|emb|CAM24063.1| proteasome (prosome, macropain) subunit, beta [Mus musculus]
Length = 277
Score = 42.0 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLTTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGI 206
>gi|152981668|ref|YP_001352365.1| hypothetical protein mma_0675 [Janthinobacterium sp. Marseille]
gi|151281745|gb|ABR90155.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 189
Score = 42.0 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 62/164 (37%), Gaps = 18/164 (10%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLER 74
TT + V+K+ + IA D V+ G T + + ++ + G AG++A + +
Sbjct: 2 TTCVVVKKNREIAIACDSLVTFGDTRLSHAYEENNKMFQIGQSYVTLAGTAAHFPVMRKL 61
Query: 75 LEKKLEQYPNQ--------LLRSSVEL-------AKDWRMDKYLRNLEAMILIADKTITL 119
L E ++ L K+ D Y + A + +A+
Sbjct: 62 LTGMGEDCKLNSRDEVFDTFTKAHQILKDQYFLNTKEEEDDPYESSQIATL-VANPYGIF 120
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
I +V + IGSG ++AL A A SA EIA
Sbjct: 121 GIYSYREVFS-FDRFWGIGSGRNFALGAMYAAYDGAASAREIAE 163
>gi|12833090|dbj|BAB22385.1| unnamed protein product [Mus musculus]
Length = 277
Score = 42.0 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLTTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGI 206
>gi|149738050|ref|XP_001502170.1| PREDICTED: similar to Proteasome subunit beta type-7 [Equus
caballus]
Length = 277
Score = 42.0 bits (98), Expect = 0.042, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGI 206
>gi|116753407|ref|YP_842525.1| proteasome endopeptidase complex [Methanosaeta thermophila PT]
gi|121694316|sp|A0B5B1|PSB_METTP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|116664858|gb|ABK13885.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosaeta thermophila
PT]
Length = 207
Score = 42.0 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 64/157 (40%), Gaps = 11/157 (7%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT + + DG VV+A + + ++G + A+K+ ++ + AG DA L+
Sbjct: 5 FKGTTTVGIVCDGGVVLASESRATMGSFIASRTAKKIYQI-DDLVGLTTAGVVGDAQALV 63
Query: 73 ERLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILI--ADK--TITLVITG 123
++ + Y Q +++ L + + +++ DK +
Sbjct: 64 RMIQAEARLYRMQRGEPLTIKAITSLLSNILSARRYFPFLVQLVVGGVDKMGPKIFSLDA 123
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+G +E E+ +++ GSG A +L S ++
Sbjct: 124 LGGQIE-EHDIVSTGSGSPIAYGVLESLYKPGLSIQD 159
>gi|85111648|ref|XP_964037.1| proteasome subunit beta type 7 precursor [Neurospora crassa OR74A]
gi|28925797|gb|EAA34801.1| proteasome subunit beta type 7 precursor [Neurospora crassa OR74A]
Length = 275
Score = 42.0 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 21/164 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + AG AG++AD
Sbjct: 29 GTTIVGCIYDGGVVIAADTRATSGPIVADKNCEKLHFIAPNIWCAG-AGTAADTEFTTAL 87
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TG 123
+ +LE + + R + + + K + +Y ++ A +++A T + G
Sbjct: 88 ISSQLELHSLSTGRKPRVVTCMTMLKQ-HLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
D L + +GSG AA ++ TQ + +AM
Sbjct: 147 STDKL----PYVTMGSGSL----AAMSVFETQWKPQLNKEEAMK 182
>gi|21592365|gb|AAM64316.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
Length = 223
Score = 42.0 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 33/179 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L N+ +GS+AD+ + +
Sbjct: 2 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQL-TDNVYVCRSGSAADSQVVSDY 60
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT---LVITG-------- 123
+ L Q+ Q + + K NL M+ +K + L++ G
Sbjct: 61 VRHFLHQHTIQHGQPA--------TVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEGGK 112
Query: 124 ------MGDVLEPENGVMAIGSGGSYALS---AARALMSTQNSAEEIARKA--MSIAAD 171
G V+E GSG SY A T+ AE++ KA ++IA D
Sbjct: 113 IYGIPLGGTVVE--QPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARD 169
>gi|242011222|ref|XP_002426354.1| proteasome subunit beta type 7 precursor, putative [Pediculus
humanus corporis]
gi|212510431|gb|EEB13616.1| proteasome subunit beta type 7 precursor, putative [Pediculus
humanus corporis]
Length = 276
Score = 42.0 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 64/187 (34%), Gaps = 36/187 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V V++ D + + G V N K+ + G AG++AD +
Sbjct: 38 GTTIVGVIFKDGVILGADTRATEGSIVSDKNCSKIHYIADNMYCCG-AGTAADTEMTTQM 96
Query: 75 LEKKLEQYPNQLLRSS-VELAKDWRMDKYLRNL--------EAMILIADKT----ITLVI 121
+ +L+ R V A ++ L+ L A +++ I
Sbjct: 97 IASQLKLQQLNTGREVPVVTA-----NRILKQLLFRYQGHIGAALVLGGVDSTGPHIFCI 151
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAA-------- 170
G + +GSG A++ A A+++ +A+ A
Sbjct: 152 HPHGS--TAKLPYATMGSGSLAAMAVFEAKWKPDLEEEEAKQLVSEAIQ-AGIFNDLGSG 208
Query: 171 ---DICV 174
D+CV
Sbjct: 209 GNVDMCV 215
>gi|209733376|gb|ACI67557.1| Proteasome subunit beta type-7 precursor [Salmo salar]
Length = 288
Score = 42.0 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 65/178 (36%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTICGVVFKDGLVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQI 101
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNL--------EAMILI----ADKTITL 119
+ LE + ++L R ++ ++ L+ + A +++ +
Sbjct: 102 ISSNLELHSLSTSRLPRVAIA-------NRMLKQMLFRYQGHIGAALVLGGVDCNGPHLY 154
Query: 120 VI--TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
I G D L + +GSG A++ A+ + R A IAA I
Sbjct: 155 SIYPHGSTDKL----PYVTMGSGSLAAMAVFEDRYKQDMGEEDAKRLVRDA--IAAGI 206
>gi|16758298|ref|NP_445984.1| proteasome subunit beta type-7 precursor [Rattus norvegicus]
gi|17380238|sp|Q9JHW0|PSB7_RAT RecName: Full=Proteasome subunit beta type-7; AltName:
Full=Macropain chain Z; AltName: Full=Multicatalytic
endopeptidase complex chain Z; AltName: Full=Proteasome
subunit Z; Flags: Precursor
gi|9719458|gb|AAF97811.1|AF285103_1 proteasome z subunit [Rattus norvegicus]
gi|38051889|gb|AAH60551.1| Proteasome (prosome, macropain) subunit, beta type 7 [Rattus
norvegicus]
Length = 277
Score = 42.0 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLTTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGI 206
>gi|256810347|ref|YP_003127716.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
fervens AG86]
gi|302595745|sp|C7P6N4|PSB_METFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|256793547|gb|ACV24216.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
fervens AG86]
Length = 224
Score = 42.0 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 15/186 (8%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M TT + + D V++A D + S+G V A+K+ ++ I AGS DA ++
Sbjct: 4 MKGTTTVGLICDDAVILATDKRASMGNLVADKEAKKLYKI-DDYIALTIAGSVGDAQAIV 62
Query: 73 ERL--EKKLEQ--YPNQL--LRSSVELAKDWRMDKYLRNLEAMIL----IADKTITLVIT 122
L E KL + + L + L+ ++Y L +I+ + + +
Sbjct: 63 RLLTAEAKLYKMRTGKNISPLACATLLSNILHSNRYFPFLTQLIIGGYDLLEGAKLFSLD 122
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
+G + E E A GSG A A EE +A KA+ A + Y+ +
Sbjct: 123 PLGGMNE-EKTFTATGSGSPIAYGVLEAGYDRDMPVEEGIKLALKALKSAMERDTYSGNG 181
Query: 180 IVLETL 185
I L +
Sbjct: 182 ISLAVI 187
>gi|224073937|ref|XP_002188518.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
type, 7 [Taeniopygia guttata]
Length = 211
Score = 42.0 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G V N K+ + G AG++AD +
Sbjct: 46 GTTIAGVIFKDGVVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTEMTTQL 104
Query: 75 LEKKLEQYP---NQLLR 88
+ LE + +L R
Sbjct: 105 ISSNLELHSLSTGRLPR 121
>gi|313228164|emb|CBY23314.1| unnamed protein product [Oikopleura dioica]
Length = 276
Score = 42.0 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT+ +G VV+ D + + G+T+ + K+ R+ G +G+SAD +
Sbjct: 45 GTTLAGCVFEGGVVMGADTRATSGETIAEKRCFKIHRITDNIYCCG-SGTSADCDQVTTM 103
Query: 75 LEKKLEQYPNQLLR------SSVELAK 95
K+E + R + +LA+
Sbjct: 104 TSTKMELHKLNTGRTPRVGTACRQLAQ 130
>gi|308800528|ref|XP_003075045.1| Pbb 20S proteasome beta subunit, probable (IC) [Ostreococcus tauri]
gi|116061599|emb|CAL52317.1| Pbb 20S proteasome beta subunit, probable (IC) [Ostreococcus tauri]
Length = 251
Score = 42.0 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 18/165 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V + V++ D + + G+TV + K+ + G AG++AD ++
Sbjct: 25 GTTICGVVFEAGVILGADTRSTNGETVADKDCEKIHYIAPNIYCCG-AGTAADTESVTGL 83
Query: 75 LEKKLEQYPNQLLR-SSVELAKDWRMDKYLR---NLEAMILI----ADKTITLVI--TGM 124
+ L + Q R S+V+ A R ++ A +++ +D + + G
Sbjct: 84 ISSNLLLHRKQTDRPSAVKSALTLLKTTLFRHQGHIGAALVLGGVDSDGSHLFTVYPHGS 143
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
D L A+GSG A++ + S A+ + +A+
Sbjct: 144 SDAL----PYAAMGSGSLAAMATLETGYHEEMSLDAAKNLVTRAI 184
>gi|109110260|ref|XP_001083368.1| PREDICTED: proteasome subunit beta type-7 [Macaca mulatta]
Length = 277
Score = 42.0 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGI 206
>gi|50546901|ref|XP_500920.1| YALI0B15224p [Yarrowia lipolytica]
gi|49646786|emb|CAG83171.1| YALI0B15224p [Yarrowia lipolytica]
Length = 286
Score = 42.0 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +V+A D + + G V KV R+ ++ AG +AD
Sbjct: 67 HGTTTLAFRFKGGIVVAVDSRATAGNWVASQTVNKVIRINP-FLLGTMAGGAADC 120
>gi|296190795|ref|XP_002743351.1| PREDICTED: proteasome subunit beta type-7-like [Callithrix jacchus]
Length = 277
Score = 42.0 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFKPDMEEEE-AKKLVSEAIAAGI 206
>gi|302783991|ref|XP_002973768.1| hypothetical protein SELMODRAFT_149251 [Selaginella moellendorffii]
gi|300158806|gb|EFJ25428.1| hypothetical protein SELMODRAFT_149251 [Selaginella moellendorffii]
Length = 269
Score = 41.6 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ L G AG++AD + +
Sbjct: 37 GTTIVGLVYQDGVILGADTRATEGDIVADKNCEKIHYLAPNIYCCG-AGTAADTEAVTDM 95
Query: 75 LEKKLEQYP 83
+ +LE +
Sbjct: 96 VRTQLELHR 104
>gi|116806958|emb|CAL26905.1| CG8392 [Drosophila simulans]
Length = 224
Score = 41.6 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G V K+ R+ + +GS+AD + +
Sbjct: 15 GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRI-TDKVYCCRSGSAADTQAIADI 73
Query: 75 LEKKLEQYPNQLLRSSV--ELAKDWR 98
+ L + NQ + ++ E A ++R
Sbjct: 74 VAYSLNYHENQTNKDALVFEAASEFR 99
>gi|296197836|ref|XP_002746462.1| PREDICTED: proteasome subunit beta type-9-like isoform 1
[Callithrix jacchus]
Length = 219
Score = 41.6 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
GD +A ++H TTI+ V DG VV+ D +VS G+ V+ K+ L + I +G
Sbjct: 9 GDLPWAGEVHTGTTIMAVEFDGGVVVGSDSRVSAGKAVVNRVFDKLSPLHE-RIYCALSG 67
Query: 64 SSADAFTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKT 116
S+ADA + + +LE + +L ++ + ++ KY +L A +L+A D+
Sbjct: 68 SAADAQAMADMAAYQLELHGIELEEPPLVLAAANVVRN-ISYKYREDLSAHLLVAGWDQR 126
Query: 117 ITLVITGM-GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ G G +L GSG +Y A S EE
Sbjct: 127 EGGQVYGTLGGMLT-RQPFAIGGSGSTYIYGYVDAAYKPGMSPEE 170
>gi|302788093|ref|XP_002975816.1| hypothetical protein SELMODRAFT_150796 [Selaginella moellendorffii]
gi|300156817|gb|EFJ23445.1| hypothetical protein SELMODRAFT_150796 [Selaginella moellendorffii]
Length = 270
Score = 41.6 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ L G AG++AD + +
Sbjct: 38 GTTIVGLVYQDGVILGADTRATEGDIVADKNCEKIHYLAPNIYCCG-AGTAADTEAVTDM 96
Query: 75 LEKKLEQYP 83
+ +LE +
Sbjct: 97 VRTQLELHR 105
>gi|170043975|ref|XP_001849640.1| proteasome subunit beta type 7 [Culex quinquefasciatus]
gi|167867238|gb|EDS30621.1| proteasome subunit beta type 7 [Culex quinquefasciatus]
Length = 282
Score = 41.6 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ L K G AG++AD
Sbjct: 41 GTTIVGIIYKDGVILGADTRATEGPIVADKNCEKIHYLAKNMYCCG-AGTAADTEMTTNM 99
Query: 75 LEKKLEQYPNQLLR 88
+ LE + R
Sbjct: 100 IASNLELHRLNTGR 113
>gi|332229979|ref|XP_003264163.1| PREDICTED: proteasome subunit beta type-7-like [Nomascus
leucogenys]
Length = 277
Score = 41.6 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGI 206
>gi|297685324|ref|XP_002820242.1| PREDICTED: proteasome subunit beta type-7-like [Pongo abelii]
Length = 277
Score = 41.6 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGI 206
>gi|320165793|gb|EFW42692.1| proteasome subunit beta 7 [Capsaspora owczarzaki ATCC 30864]
Length = 273
Score = 41.6 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 65/174 (37%), Gaps = 26/174 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + V + N +K+ + G AG++AD +
Sbjct: 39 GTTICGVIFKHGVVLGADTRATNDTIVAQKNCQKIHYIAPNIYCCG-AGTAADTEQSTKM 97
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL--IADKTITLVITG---MGDV-- 127
+ +LE + + + R+ R L+ M+ + LV+ G G
Sbjct: 98 IASQLELHR-------LTTGRKSRVVTACRLLKQMLFKYQGNIGAALVLGGVDINGPTLY 150
Query: 128 -LEPENGV-----MAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
+ P + +GSG A++ A A ++ R A IAA I
Sbjct: 151 SIHPHGSTDKLPYVTMGSGSLAAMAVFEAGYRPDMEEADAVKLVRDA--IAAGI 202
>gi|84370087|ref|NP_001033616.1| proteasome subunit beta type-7 precursor [Bos taurus]
gi|122137066|sp|Q2TBP0|PSB7_BOVIN RecName: Full=Proteasome subunit beta type-7; Flags: Precursor
gi|83638689|gb|AAI09869.1| Proteasome (prosome, macropain) subunit, beta type, 7 [Bos taurus]
Length = 277
Score = 41.6 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGI 206
>gi|226471390|emb|CAX70776.1| proteasome (prosome, macropain) subunit, beta type, 7
[Schistosoma japonicum]
Length = 87
Score = 41.6 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
TTI V +V+ D + + G V + N K+ R+ ++ G GS
Sbjct: 38 GTTICGVVFKNGIVLGADTRATEGNIVAEKNCSKIHRIADNMLLWGRDGS 87
>gi|296482169|gb|DAA24284.1| proteasome beta 7 subunit precursor [Bos taurus]
Length = 277
Score = 41.6 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGI 206
>gi|15235889|ref|NP_194858.1| PBA1; endopeptidase/ peptidase/ threonine-type endopeptidase
[Arabidopsis thaliana]
gi|82581522|sp|Q8LD27|PSB6_ARATH RecName: Full=Proteasome subunit beta type-6; AltName: Full=20S
proteasome beta subunit A-1; AltName: Full=Proteasome
component D; AltName: Full=Proteasome subunit beta
type-1; Flags: Precursor
gi|2511594|emb|CAA74028.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
gi|2827525|emb|CAA16533.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
gi|3421099|gb|AAC32065.1| 20S proteasome subunit PBA1 [Arabidopsis thaliana]
gi|7270032|emb|CAB79848.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
gi|15450505|gb|AAK96545.1| AT4g31300/F8F16_120 [Arabidopsis thaliana]
gi|16323318|gb|AAL15414.1| AT4g31300/F8F16_120 [Arabidopsis thaliana]
gi|332660487|gb|AEE85887.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
gi|332660489|gb|AEE85889.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
Length = 233
Score = 41.6 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 33/179 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L N+ +GS+AD+ + +
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQL-TDNVYVCRSGSAADSQVVSDY 70
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT---LVITG-------- 123
+ L Q+ Q + + K NL M+ +K + L++ G
Sbjct: 71 VRYFLHQHTIQHGQPA--------TVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEGGK 122
Query: 124 ------MGDVLEPENGVMAIGSGGSYALS---AARALMSTQNSAEEIARKA--MSIAAD 171
G V+E GSG SY A T+ AE++ KA ++IA D
Sbjct: 123 IYGIPLGGTVVE--QPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARD 179
>gi|91094821|ref|XP_971003.1| PREDICTED: similar to proteasome subunit beta 7 [Tribolium
castaneum]
gi|270006571|gb|EFA03019.1| hypothetical protein TcasGA2_TC010442 [Tribolium castaneum]
Length = 275
Score = 41.6 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 67/178 (37%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + TV N K+ L G AG++AD +
Sbjct: 38 GTTIVGITYKDGVILGADTRATEDTTVSDKNCEKIHYLASNMYCCG-AGTAADTEQTTQM 96
Query: 75 LEKKLEQYP---NQLLRSSV--ELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ +LE + N+ R + ++ K YL + I A ++ G DV
Sbjct: 97 ISSQLELHRLFTNRTPRVATANQMLKQ-----YLFRYQGYIGAA------LVLGGVDVTG 145
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
P +G +GSG A++ + EE + R A IAA I
Sbjct: 146 PHLYSIYPHGSTDKLPYTTMGSGSLAAMAVFESRWKPDLDEEEGVKLVRDA--IAAGI 201
>gi|52547778|gb|AAU81924.1| low molecular mass protein 2 [Marmota monax]
Length = 192
Score = 41.6 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G+ V+ K+ L I +GS+ADA + +
Sbjct: 1 TTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHH-RIYCALSGSAADAQAVADM 58
>gi|195057410|ref|XP_001995254.1| GH23050 [Drosophila grimshawi]
gi|193899460|gb|EDV98326.1| GH23050 [Drosophila grimshawi]
Length = 315
Score = 41.6 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 21/168 (12%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + G VV+ D + + GQ + RK+ L ++ AG +AD
Sbjct: 70 HGTTTLGFKYQGGVVLCADSRATSGQYIGSQTMRKIVEL-NNYMLGTLAGGAADCVYWDR 128
Query: 74 RLEKKLEQYPNQLLRSS-VELAKDWRMDKYLRNLEA-----------MILIADKTITLVI 121
L ++ + + R V+ A + + N+ A M+ D +I
Sbjct: 129 VLARECRLHELRYKRRIMVDAAA-----RMMCNICAEYKGMGLVMGMMLAGCDDEGCKLI 183
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAM 166
+ + V ++GSG +YAL T A ++AR+A+
Sbjct: 184 YVDSEGMRSHGSVFSVGSGSTYALGVLDTGYRWDLTDEEAYDLARRAI 231
>gi|255513744|gb|EET90009.1| Proteasome endopeptidase complex [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 210
Score = 41.6 bits (97), Expect = 0.055, Method: Composition-based stats.
Identities = 45/191 (23%), Positives = 76/191 (39%), Gaps = 14/191 (7%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M K + M TT + + VVIA D + ++ + ARKV ++ N+ AG
Sbjct: 1 MDQKDISRYMKGTTTVGLVCTDGVVIAADSRATMDTFIASTEARKVWKI-DENLGMTIAG 59
Query: 64 SSADAFTLLERLEKKLEQYPNQLLR------SSVELAKDWRMDKYLRNLEAMIL--IADK 115
DA L+ L+ + E Y + ++ L+ + +K + +I+ + D
Sbjct: 60 LVGDAQELIRILKIQNEIYKMNERKQMSPRSAATLLSIILQENKMMPFYVQLIVGGVEDG 119
Query: 116 T-ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAAD 171
+ G + E+ A GSG AL T A +IA KA+ IA
Sbjct: 120 KGYVYNLDAAGGYTQ-ESRFTATGSGSLTALGYLEDSYKPGLTTKDAIKIAAKALLIAMQ 178
Query: 172 ICVYTNHNIVL 182
T +N+ +
Sbjct: 179 RDSATGNNMTI 189
>gi|308470159|ref|XP_003097314.1| CRE-PBS-2 protein [Caenorhabditis remanei]
gi|308240286|gb|EFO84238.1| CRE-PBS-2 protein [Caenorhabditis remanei]
Length = 290
Score = 41.6 bits (97), Expect = 0.056, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M MG K + TTI+ G +V+ D + + G + + KV +L + G
Sbjct: 45 MCKMGAKAPRLTSTGTTIVAAAYKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACG 104
Query: 61 FAGSSADAFTLLERLEKKLE 80
AG++AD + + L L
Sbjct: 105 -AGTAADLDQVTKMLSGNLR 123
>gi|316934300|ref|YP_004109282.1| 20S proteasome subunits A/B [Rhodopseudomonas palustris DX-1]
gi|315602014|gb|ADU44549.1| 20S proteasome A and B subunits [Rhodopseudomonas palustris DX-1]
Length = 153
Score = 41.6 bits (97), Expect = 0.056, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 60/157 (38%), Gaps = 37/157 (23%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI R V+A DG+V+ G ++ N +K+RRL G++ A G L+E
Sbjct: 2 TTI-AWRDG---VLAADGRVTYGGSLILTDNCKKIRRLSDGSLFA-LCGDPVLEERLIEW 56
Query: 75 LEKKLEQY----PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-VITGMGDVLE 129
LE E KD+ ++ D L G GD
Sbjct: 57 LENCEEGESPPPQG----------KDF-----------TAILVDHDGALSTYEGSGDRFM 95
Query: 130 P-ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKA 165
P +G A GSG +A A M +AEE + A
Sbjct: 96 PMYDGFAAFGSGMDFAYGA----MEVGATAEEAVKAA 128
>gi|2582504|gb|AAB82570.1| 20S proteasome beta2 subunit [Drosophila melanogaster]
Length = 272
Score = 41.6 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ L K G AG++AD +
Sbjct: 39 GTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEMTTDL 97
Query: 75 LEKKLEQYPNQLLR 88
+ +LE + Q R
Sbjct: 98 ISSQLELHRLQTDR 111
>gi|40889391|pdb|1Q5Q|H Chain H, The Rhodococcus 20s Proteasome
gi|40889392|pdb|1Q5Q|I Chain I, The Rhodococcus 20s Proteasome
gi|40889393|pdb|1Q5Q|J Chain J, The Rhodococcus 20s Proteasome
gi|40889394|pdb|1Q5Q|K Chain K, The Rhodococcus 20s Proteasome
gi|40889395|pdb|1Q5Q|L Chain L, The Rhodococcus 20s Proteasome
gi|40889396|pdb|1Q5Q|M Chain M, The Rhodococcus 20s Proteasome
gi|40889397|pdb|1Q5Q|N Chain N, The Rhodococcus 20s Proteasome
Length = 235
Score = 41.6 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ + G V++AGD + + G + + KV + AG AG++ A L+
Sbjct: 1 TTIVALTYKGGVLLAGDRRATQGNLIASRDVEKV-YVTDEYSAAGIAGTAGIAIELVRLF 59
Query: 76 EKKLEQY 82
+LE Y
Sbjct: 60 AVELEHY 66
>gi|301769261|ref|XP_002920046.1| PREDICTED: proteasome subunit beta type-7-like [Ailuropoda
melanoleuca]
gi|281350176|gb|EFB25760.1| hypothetical protein PANDA_008725 [Ailuropoda melanoleuca]
Length = 277
Score = 41.6 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGI 206
>gi|66519842|ref|XP_391905.2| PREDICTED: proteasome subunit beta type-7-like [Apis mellifera]
Length = 277
Score = 41.6 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ GD + + V N K+ L + G AG++AD +
Sbjct: 39 GTTIAGVVYKDGVVLGGDTRSTENTIVADKNCSKIHYLAENMYCCG-AGTAADTEMTTQM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +LE + R
Sbjct: 98 ISSQLELHRLNTNR 111
>gi|296197838|ref|XP_002746463.1| PREDICTED: proteasome subunit beta type-9-like isoform 2
[Callithrix jacchus]
Length = 209
Score = 41.6 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G+ V+ K+ L + I +GS+ADA + +
Sbjct: 10 GTTIMAVEFDGGVVVGSDSRVSAGKAVVNRVFDKLSPLHE-RIYCALSGSAADAQAMADM 68
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
+LE + +L ++ + ++ KY +L A +L+A D+ + G
Sbjct: 69 AAYQLELHGIELEEPPLVLAAANVVRN-ISYKYREDLSAHLLVAGWDQREGGQVYGTLGG 127
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ GSG +Y A S EE
Sbjct: 128 MLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEE 160
>gi|223936033|ref|ZP_03627947.1| 20S proteasome A and B subunits [bacterium Ellin514]
gi|223895255|gb|EEF61702.1| 20S proteasome A and B subunits [bacterium Ellin514]
Length = 256
Score = 41.6 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M + ATT+ V++AGD + + G ++ KV + +++A
Sbjct: 23 MRTATSPAAPTQTQATTVFAFHFAEGVMMAGDRRATAGNVIVTDKVDKVIEIDAASLLA- 81
Query: 61 FAGSSADAFTLLERLEKKLEQYP 83
AG A AF + L+ E Y
Sbjct: 82 IAGVPATAFEMARVLQISFEYYR 104
>gi|161529236|ref|YP_001583062.1| proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
gi|302595719|sp|A9A2U7|PSB2_NITMS RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome
core protein PsmB 2; Flags: Precursor
gi|160340537|gb|ABX13624.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 210
Score = 41.6 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + +H TT + ++ VV+ D + S G + N K++++ + AG
Sbjct: 1 MSNNVEEKILHGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKI-DDHAGLTLAG 59
Query: 64 SSADAFTLLERLEKKLEQYPNQLLR 88
ADA +++ L +Y + L R
Sbjct: 60 GVADAQNIVDIL-----RYHSNLHR 79
>gi|298709136|emb|CBJ31081.1| 26S proteasome beta type 7 subunit [Ectocarpus siliculosus]
Length = 307
Score = 41.6 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ TTI G VV+ D + + G V+ N K+ L G AG++AD
Sbjct: 63 KLTGTTICGCIYKGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCG-AGTAADTEKT 121
Query: 72 LERLEKKLEQYPNQLLR 88
E + +L LLR
Sbjct: 122 TEMISGQL-----DLLR 133
>gi|110668567|ref|YP_658378.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|121689658|sp|Q18GX3|PSB_HALWD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|109626314|emb|CAJ52772.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|148508113|gb|ABQ75907.1| proteasome beta subunit [uncultured haloarchaeon]
Length = 243
Score = 41.6 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 68/179 (37%), Gaps = 37/179 (20%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + ++ V+A D + SLG+ V + +KV + + AGS + A +L+
Sbjct: 49 GTTTVGLKTQDGTVLATDMRASLGRMVSSKDVQKVEEIHPTGALT-IAGSVSAAQSLISS 107
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRM-DKYLRNLEAMI----------LIA--------DK 115
+R+ V L + R D + L ++ ++ D
Sbjct: 108 ------------IRAEVRLYEARRGEDMSMEALSTLLGNFLRSGGFFIVQPILGGVDDDG 155
Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
I G ++E E V GSG YAL + S A+ +A +++ A +
Sbjct: 156 PHIYSIDPAGSIIEEEYTV--TGSGSQYALGVLEQQYNEDLSIEEAKTVAARSIESAVE 212
>gi|115466298|ref|NP_001056748.1| Os06g0139900 [Oryza sativa Japonica Group]
gi|55296478|dbj|BAD68674.1| putative beta 1 subunit of 20S proteasome [Oryza sativa Japonica
Group]
gi|113594788|dbj|BAF18662.1| Os06g0139900 [Oryza sativa Japonica Group]
gi|125553981|gb|EAY99586.1| hypothetical protein OsI_21564 [Oryza sativa Indica Group]
gi|125595991|gb|EAZ35771.1| hypothetical protein OsJ_20062 [Oryza sativa Japonica Group]
gi|215679027|dbj|BAG96457.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 246
Score = 41.2 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+A D + S G V + K+ +L N+ +GS+AD + E
Sbjct: 25 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQL-TDNVYVCRSGSAADTQVISEY 83
Query: 75 LEKKLEQYPNQL-LRSSVELAKDW-RMDKYLRN--LEAMILIA--DK---TITLVITGMG 125
+ L Q+ QL ++V++A + R+ Y L+A +++ DK + G
Sbjct: 84 VRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGG 143
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK------AMSIAAD 171
+L GSG SY S EE A K +++IA D
Sbjct: 144 TILR--QPFAIGGSGSSYLYGLLDHEWKEGMSQEE-AEKFVVKVVSLAIARD 192
>gi|300123175|emb|CBK24448.2| unnamed protein product [Blastocystis hominis]
Length = 271
Score = 41.2 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 29/172 (16%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V+IA D + + ++ KV + G AG++ADA + +
Sbjct: 42 GTTIVGLIYKDGVIIAADQRATTDSLIVDKECLKVHYIAPNIYCCG-AGTAADADEITD- 99
Query: 75 LEKKLEQYPNQLLR----------SSVELAKDWRMDKYLRNLEAMILI----ADKTITLV 120
L + L+R S+++L D R+ +Y + A +++ D +
Sbjct: 100 ----LVSHQLALMRLQTGKQSRVCSAMQLFAD-RLFQYQGYISAALILGGCDIDGSHLYG 154
Query: 121 ITGMGDVLE-PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
I G V P + +GSG A+S E A+ +AAD
Sbjct: 155 IWPNGSVDSLPYD---TLGSGSYAAMSVLEHRYRPDMEENE----AIELAAD 199
>gi|126136741|ref|XP_001384894.1| hypothetical protein PICST_36375 [Scheffersomyces stipitis CBS
6054]
gi|126092116|gb|ABN66865.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 282
Score = 41.2 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + + G + KV R+ ++ AG +AD
Sbjct: 69 HGTTTLAFRFQGGIIVAVDSRATQGNWIASQTVNKVIRINP-FLLGTMAGGAADC 122
>gi|148223599|ref|NP_001090945.1| proteasome subunit beta type-7 precursor [Sus scrofa]
gi|117660969|gb|ABK55647.1| PSMB7 [Sus scrofa]
Length = 277
Score = 41.2 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 66/178 (37%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
P +G + +GSG A++ + A+++ +A IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPEMEEEEAKQLVSEA--IAAGI 206
>gi|85014261|ref|XP_955626.1| proteasome subunit beta [Encephalitozoon cuniculi GB-M1]
gi|74664155|sp|Q8SQN7|PSB7_ENCCU RecName: Full=Probable proteasome subunit beta type-7; AltName:
Full=26S proteasome beta-type subunit PUP1; AltName:
Full=Multicatalytic endopeptidase complex subunit PUP1;
Flags: Precursor
gi|19171320|emb|CAD27045.1| PROTEASOME BETA-TYPE SUBUNIT (MACROPAIN SUBUNIT PUP1)
[Encephalitozoon cuniculi GB-M1]
Length = 227
Score = 41.2 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ ++ V++A D + + G V N K+ ++ I+ AG++ADA +
Sbjct: 6 GTTIVGMKYKTGVILAADTRSTQGPVVSDKNCVKIHQI-TDKIMCCGAGTAADASRVARM 64
Query: 75 LEKKLEQYPNQLLR 88
++L + N+ LR
Sbjct: 65 ASRELRLFQNKYLR 78
>gi|323449160|gb|EGB05050.1| hypothetical protein AURANDRAFT_69937 [Aureococcus anophagefferens]
Length = 279
Score = 41.2 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + DG +V+ D + + G V N K+ L G AG++AD E
Sbjct: 46 GTTICGMVYDGGIVLGADTRATAGSEVADKNCEKIHYLAPNIYCCG-AGTAADTEKTTEL 104
Query: 75 LEKKLE 80
+ +LE
Sbjct: 105 IASQLE 110
>gi|307108770|gb|EFN57009.1| hypothetical protein CHLNCDRAFT_30565 [Chlorella variabilis]
Length = 271
Score = 41.2 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+H TTI + VV+ D + + G TV N K+ + G AG++A
Sbjct: 26 QHPGFTKTGTTIAGLIFKDGVVLGADTRSTAGSTVADKNCEKIHFIAPNIYCCG-AGTAA 84
Query: 67 DAFTLLERLEKKLEQYP 83
D + + +LE +
Sbjct: 85 DTENVTGMVASQLELHR 101
>gi|167999091|ref|XP_001752251.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696646|gb|EDQ82984.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 41.2 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G V++ D + + G V + K+ L + +GS+AD+ + +
Sbjct: 13 GTTIMAVEYNGGVILGADSRTTTGVYVANRASDKITELTDNVYLC-RSGSAADSQVVSDY 71
Query: 75 LEKKLEQYPNQLLR-SSVELAKDWRMDKYLRN---LEAMILIA--DK---TITLVITGMG 125
+ L Q+ L R ++V+ A + +N LE +++A DK I G
Sbjct: 72 VRYFLNQHTILLGRLATVKTASTLVKELSYQNKSFLETGLIVAGWDKYEGGSVYGIPLGG 131
Query: 126 DVLEPENGVMAIGSGGSYA---LSAARALMSTQNSAEEIARK--AMSIAAD 171
+L GSG SY L A TQ AE + K +++IA D
Sbjct: 132 TLLR--LPFATGGSGSSYLYGFLDQAWKSNMTQEEAEALVVKSISLAIARD 180
>gi|119719309|ref|YP_919804.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595733|sp|A1RX71|PSB2_THEPD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119524429|gb|ABL77801.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 204
Score = 41.2 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 21/166 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT+ +R VV+A + +VS G +M + +KV R+ + AG AD TL
Sbjct: 6 GTTV-GIRVSDGVVLAAEKRVSYGLYLMSKSGKKVYRIL-DKMGMASAGLMADMQTLARI 63
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYL------RNL---EAMILI--ADKT--ITLVI 121
+E ++ Y S K W + K L R L A I++ D+ +
Sbjct: 64 VEAEMRLYELDSNIS----PKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGSHLYSL 119
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
+G ++E + +A+GSG A+S + S +E A+
Sbjct: 120 DPIGAIIE--DDYVALGSGTQLAISIVESNYKKDMSLDEALSLALK 163
>gi|90076452|dbj|BAE87906.1| unnamed protein product [Macaca fascicularis]
Length = 277
Score = 41.2 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGMVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI 172
P +G + +GSG A++ EE A+K + +IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGI 206
>gi|308807300|ref|XP_003080961.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
gi|116059422|emb|CAL55129.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
Length = 233
Score = 41.2 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 73/190 (38%), Gaps = 25/190 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+L V + V+ AGD ++S G ++ K+ ++ G + AG +ADA TL +
Sbjct: 25 GGTVLAVAGESYVICAGDTRMSSGYNILTRKFEKIDKMS-GKTLMASAGFAADAVTLKKT 83
Query: 75 LEKKLEQYPNQLLR--SSVELAKDWRMDKYLRNL---EAMILIA--DKT----------- 116
L+ + +QY Q R V A+ Y R A ++A D
Sbjct: 84 LKARCKQYEFQNKREIGCVAFAQMLSNTLYYRRFFPYYAFNIVAGLDAEGKGAVFTYDAV 143
Query: 117 -----ITLVITGMGD-VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
G G ++ P +A+ A ++ A ++ + + AA
Sbjct: 144 GSYERTNYSCQGSGQALIMPVLDNQLKTVSPLVLPAASSATPLSEQEAIDLIKDCFATAA 203
Query: 171 DICVYTNHNI 180
+ +YT ++
Sbjct: 204 ERDIYTGDSV 213
>gi|171696250|ref|XP_001913049.1| hypothetical protein [Podospora anserina S mat+]
gi|170948367|emb|CAP60531.1| unnamed protein product [Podospora anserina S mat+]
Length = 274
Score = 41.2 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + AG AG++AD
Sbjct: 29 GTTIVGCIYDGGVVIAADTRATSGPIVADKNCEKLHYISPNIWCAG-AGTAADTEFTTAL 87
Query: 75 LEKKLEQYP 83
+ +LE +
Sbjct: 88 ISSQLELHS 96
>gi|47157007|gb|AAT12375.1| proteasome beta-type subunit-like protein [Antonospora locustae]
Length = 190
Score = 41.2 bits (96), Expect = 0.071, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H A K TTI+ +R G V + D + ++G V N K+ +L I AG++AD
Sbjct: 13 HLAPKKTGTTIVGLRFAGGVALFADTRATIGDVVEDKNCFKLHQLA-DTIHCAGAGTAAD 71
Query: 68 AFTLLERLEKKL 79
L + L
Sbjct: 72 TEHLTASCARFL 83
>gi|242000314|ref|XP_002434800.1| proteasome beta2 subunit, putative [Ixodes scapularis]
gi|215498130|gb|EEC07624.1| proteasome beta2 subunit, putative [Ixodes scapularis]
Length = 278
Score = 41.2 bits (96), Expect = 0.071, Method: Composition-based stats.
Identities = 44/193 (22%), Positives = 69/193 (35%), Gaps = 44/193 (22%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G + N K+ + G AG++AD
Sbjct: 40 GTTIVGIIFKDGVILGADTRATSGSIIADKNCAKIHYMAPNIYCCG-AGTAADTEKTTNM 98
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYL---RNLEAMILIADKTIT--LVITG---MGD 126
+ +LE + LA R R L+ M+ I+ LV+ G G
Sbjct: 99 ISSQLELHR---------LATG-RTVPVCTANRMLKQMLFRYQGHISAALVLGGVDNTGG 148
Query: 127 V---LEPENGV-----MAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAA----- 170
V + P + +GSG A++ + EE + R A IAA
Sbjct: 149 VLCCIHPHGSTDRLPYVTMGSGSLAAMAVFERDWKPDMTLEEGKKVVRNA--IAAGIFND 206
Query: 171 -------DICVYT 176
DICV T
Sbjct: 207 LGSGSNVDICVIT 219
>gi|160419232|sp|A1XQU1|PSB7_PIG RecName: Full=Proteasome subunit beta type-7; Flags: Precursor
gi|123299966|dbj|BAF45330.1| proteasome beta 7 subunit proprotein [Sus scrofa]
Length = 277
Score = 41.2 bits (96), Expect = 0.071, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 66/178 (37%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
P +G + +GSG A++ + A+++ +A IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPEMEEEEAKQLVSEA--IAAGI 206
>gi|260947704|ref|XP_002618149.1| proteasome component PRE2 precursor [Clavispora lusitaniae ATCC
42720]
gi|238848021|gb|EEQ37485.1| proteasome component PRE2 precursor [Clavispora lusitaniae ATCC
42720]
Length = 282
Score = 41.2 bits (96), Expect = 0.073, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + + G V KV R+ ++ AG +AD
Sbjct: 69 HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVNKVIRINP-FLLGTMAGGAADC 122
>gi|189067246|dbj|BAG36956.1| unnamed protein product [Homo sapiens]
Length = 277
Score = 41.2 bits (96), Expect = 0.073, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 65/178 (36%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
P +G + +GSG A++ + EE + +A IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKLRPDMEEEEAKNLVSEA--IAAGI 206
>gi|321260090|ref|XP_003194765.1| proteasome component [Cryptococcus gattii WM276]
gi|317461237|gb|ADV22978.1| Proteasome component, putative [Cryptococcus gattii WM276]
Length = 301
Score = 41.2 bits (96), Expect = 0.073, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 3 VMGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG- 60
+ + +K+ H TT L R G +++A D + + G V +KV + + G
Sbjct: 69 MSANPEAKIKIAHGTTTLAFRFKGGIIVAVDSRATAGSYVASGTVKKV--IEINKFLLGT 126
Query: 61 FAGSSADA 68
AG +AD
Sbjct: 127 MAGGAADC 134
>gi|196003382|ref|XP_002111558.1| hypothetical protein TRIADDRAFT_55706 [Trichoplax adhaerens]
gi|190585457|gb|EDV25525.1| hypothetical protein TRIADDRAFT_55706 [Trichoplax adhaerens]
Length = 276
Score = 41.2 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + S+G + +KV + ++ AG +AD
Sbjct: 71 LHGTTTLAFKFKNGVIVAADSRASMGSYIGSQTVKKVIEINPY-LLGTMAGGAADC 125
>gi|170291074|ref|YP_001737890.1| proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
gi|302595814|sp|B1L6X8|PSB2_KORCO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170175154|gb|ACB08207.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 198
Score = 41.2 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 16/166 (9%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T L +R DG VV+A D +VS ++ +ARKV L + AG D L++ L+
Sbjct: 5 TALGLRFDGGVVLAADRRVSYNGFILSKSARKV-FLINERVGVSTAGLPGDFQELVDVLK 63
Query: 77 KKLEQYPNQLLRSS--VELAKDWRMDKYLRNLE----AMILIADKTI----TLVITGMGD 126
+ Y + +++ +AK + Y A +++ V+ G
Sbjct: 64 YNITMYELENEKAATPTNVAKLLSILLYQGRFSGIYYAELVVGGIDNSGPKIFVLDPAGG 123
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
++E A+GSG A S A E+A +AM A
Sbjct: 124 LME--ENFSAVGSGAQIATGILERFFKEGMSEKEAVELAERAMREA 167
>gi|116181580|ref|XP_001220639.1| proteasome subunit beta type 7 precursor [Chaetomium globosum CBS
148.51]
gi|88185715|gb|EAQ93183.1| proteasome subunit beta type 7 precursor [Chaetomium globosum CBS
148.51]
Length = 272
Score = 41.2 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + AG AG++AD
Sbjct: 29 GTTIVGCIYDGGVVIAADTRATSGPIVADKNCEKLHYIAPNIWCAG-AGTAADTEFTTAL 87
Query: 75 LEKKLEQYP 83
+ +LE +
Sbjct: 88 ISSQLELHS 96
>gi|114626642|ref|XP_001141090.1| PREDICTED: proteasome beta 7 subunit isoform 4 [Pan troglodytes]
Length = 241
Score = 41.2 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 64/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
P +G + +GSG A++ EE + +A IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGI 206
>gi|169625204|ref|XP_001806006.1| hypothetical protein SNOG_15869 [Phaeosphaeria nodorum SN15]
gi|160705619|gb|EAT76707.2| hypothetical protein SNOG_15869 [Phaeosphaeria nodorum SN15]
Length = 227
Score = 41.2 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ + +K+ H TT L R G +++A D + + G + +KV + ++ AG
Sbjct: 57 SNPNCPIKIAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIEI-NNCLLGTMAG 115
Query: 64 SSA 66
+A
Sbjct: 116 GAA 118
>gi|1799522|dbj|BAA19146.1| proteasome component PUP1 precursor [Schizosaccharomyces pombe]
Length = 258
Score = 41.2 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +V+ D + + G + N +K+ + AG AG++AD +
Sbjct: 26 GTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAG-AGTAADTEFVTSM 84
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKT----ITLVIT--G 123
+ +E + R +++ + K + +Y ++ A +++ I G
Sbjct: 85 ISSNIELHSLYTNRKPRVVTALTMLKQ-HLFRYQGHIGAYLVLGGYDCKGPHLFTIAAHG 143
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
D L +A+GSG A+S A E+ ++A+
Sbjct: 144 SSDKL----PYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIE 186
>gi|58268812|ref|XP_571562.1| proteasome component pts1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134113116|ref|XP_774834.1| hypothetical protein CNBF2630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257480|gb|EAL20187.1| hypothetical protein CNBF2630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227797|gb|AAW44255.1| proteasome component pts1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 301
Score = 41.2 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 3 VMGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG- 60
+ + +K+ H TT L R G +++A D + + G V +KV + + G
Sbjct: 69 MSANPEAKIKIAHGTTTLAFRFKGGIIVAVDSRATAGSYVASGTVKKV--IEINKFLLGT 126
Query: 61 FAGSSADA 68
AG +AD
Sbjct: 127 MAGGAADC 134
>gi|328766922|gb|EGF76974.1| hypothetical protein BATDEDRAFT_92136 [Batrachochytrium
dendrobatidis JAM81]
Length = 231
Score = 41.2 bits (96), Expect = 0.078, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT L + D VIAGD + S G ++ A KV + G ++A G AD+ TL++R
Sbjct: 28 GTT-LAIAGDDFCVIAGDTRQSEGYSINTRYAPKVHEMRNGTVLAT-GGMFADSQTLMKR 85
Query: 75 LEKKLEQYP 83
++++LE Y
Sbjct: 86 IQQRLEWYQ 94
>gi|45383366|ref|NP_989728.1| proteasome subunit beta type-7 [Gallus gallus]
gi|30268674|dbj|BAC76008.1| proteasome subunit Z [Gallus gallus]
Length = 277
Score = 41.2 bits (96), Expect = 0.078, Method: Composition-based stats.
Identities = 40/178 (22%), Positives = 65/178 (36%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVFKDGVVLGADTRATEGMVVADKNCSKIHYISSNIYCCG-AGTAADTEMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 IASNLELHALSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
P +G + +GSG A++ A+++ R A IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAIFEDKYKPDMEEEEAKQLVRDA--IAAGI 206
>gi|156937771|ref|YP_001435567.1| proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
gi|302595716|sp|A8AB58|PSB2_IGNH4 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome
core protein PsmB 2; Flags: Precursor
gi|156566755|gb|ABU82160.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 212
Score = 40.8 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D+ A + TT + +R + VV+A D + + G ++ K+ ++ + AG
Sbjct: 4 DEKVARALKGTTTVGIRSEKAVVLAADKRATAGNFIVHKRVEKIVKISDYMAMTT-AGLV 62
Query: 66 ADAFTLLERLEKKLEQY 82
ADA L + L +++ Y
Sbjct: 63 ADAQVLADVLRMEVKNY 79
>gi|307182515|gb|EFN69722.1| Proteasome subunit beta type-5 [Camponotus floridanus]
Length = 286
Score = 40.8 bits (95), Expect = 0.082, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 7 KHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
KH +K H TT L R G +V+A D + + GQ + + +K+ + ++ AG +
Sbjct: 65 KHLKIKFDHGTTTLGFRYQGGIVLAVDSRATGGQFIGSSTMKKIVEI-NDYLLGTLAGGA 123
Query: 66 ADAFTLLERLEKKLEQY 82
AD L ++ Y
Sbjct: 124 ADCVYWDRVLARQCRMY 140
>gi|323474698|gb|ADX85304.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477432|gb|ADX82670.1| proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 211
Score = 40.8 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 74/181 (40%), Gaps = 22/181 (12%)
Query: 1 MVVMGDKHYAVK--MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNI 57
MV+MG++ + TT + ++ + VV+A D + S G V RKV L I
Sbjct: 1 MVIMGNELQLENKILKGTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKV--LYITDKI 58
Query: 58 IAGFAGSSADAFTLLERLEKKLEQYPNQLLR--------SSVELAKDWRMDKYLRNLEAM 109
AGS AD + L+ + N + + + LA KY + +
Sbjct: 59 GITTAGSVADLQFIYNVLKNIY--HYNSITKYGPISIKGIATRLANVLSATKYFPYIVQI 116
Query: 110 ILIA--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARK 164
++ D+ + +GD+ E +A GSG A+ + T + A ++A++
Sbjct: 117 LIGGYDDQPRLFNLDYLGDITE--ENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKR 174
Query: 165 A 165
A
Sbjct: 175 A 175
>gi|323450997|gb|EGB06876.1| hypothetical protein AURANDRAFT_28593 [Aureococcus anophagefferens]
Length = 287
Score = 40.8 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
D H VK TT L + +G V+I+ D + ++G + +KV + ++ AG
Sbjct: 56 TDHHQDVKFAKGTTTLAFKFNGGVIISVDSRSTMGPYIASQTVKKVIEINP-FLLGTMAG 114
Query: 64 SSADA 68
+AD
Sbjct: 115 GAADC 119
>gi|320590110|gb|EFX02555.1| proteasome component [Grosmannia clavigera kw1407]
Length = 284
Score = 40.8 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ +K+ H TT L R G +++A D + + G + +KV + ++ AG
Sbjct: 58 SNPTCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAG 116
Query: 64 SSADA 68
+AD
Sbjct: 117 GAADC 121
>gi|302660177|ref|XP_003021770.1| proteasome component Pre3, putative [Trichophyton verrucosum HKI
0517]
gi|291185685|gb|EFE41152.1| proteasome component Pre3, putative [Trichophyton verrucosum HKI
0517]
Length = 281
Score = 40.8 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + + G + +KV + ++ AG +AD
Sbjct: 64 HGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAGGAADC 117
>gi|10803372|emb|CAC13119.1| low molecular mass polypeptide subunit PSMB9-L [Takifugu
rubripes]
Length = 217
Score = 40.8 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TTIL DG VVI D + S+ G+ V KV ++ I AGS ADA + +
Sbjct: 16 GTTILAATFDGGVVIGSDSRASMGGEYVSSKTINKVIKV-HDRIFCCMAGSLADAQAVTK 74
Query: 74 RLEKKLEQYPNQL 86
+ L + Q+
Sbjct: 75 AAKFHLSFHSVQM 87
>gi|71659830|ref|XP_821635.1| proteasome beta 2 subunit [Trypanosoma cruzi strain CL Brener]
gi|70887019|gb|EAN99784.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
Length = 302
Score = 40.8 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V VV+ D + + G V +K+ + + G AG++AD +
Sbjct: 76 GTTIVGVVYKEGVVLGADTRATEGSIVADKRCKKIHYMAPNIMCCG-AGTAADTEAVTNM 134
Query: 75 LEKKLEQYP 83
+ L +
Sbjct: 135 VSANLALHR 143
>gi|197129151|gb|ACH45649.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
Length = 278
Score = 40.8 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V +A D + + G + + RKV +G G ++ AG +AD
Sbjct: 74 LHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPIG-GRMLGTMAGGAADC 128
>gi|225705938|gb|ACO08815.1| Proteasome subunit beta type 6 precursor [Oncorhynchus mykiss]
Length = 184
Score = 40.8 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
TTIL V +G V+I D + S+G + +++ + +L I AGS ADA +
Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGYYV--SSKTINKLIQVHDRIFCCIAGSLADAQAVT 73
Query: 73 ERLEKKLEQYPNQ-----LLRSSVELAKD 96
+ + ++ + Q L++++ + K+
Sbjct: 74 KAAKFQISFHSIQMESPPLVKAAASVLKE 102
>gi|255938700|ref|XP_002560120.1| Pc14g01260 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584741|emb|CAP74267.1| Pc14g01260 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 260
Score = 40.8 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+++ V+ +G V IA D S G ++ +++R + GF G +D L
Sbjct: 40 GTSVVGVKFNGGVAIATDNLASYGSLARFSDVKRLRN-FGDKAMVGFGGDVSDMQYLDRL 98
Query: 75 LE----KKLEQYPNQLLRS 89
L+ K+ + +L +
Sbjct: 99 LDSMDIKENYSHHGNMLNA 117
>gi|197129152|gb|ACH45650.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
Length = 278
Score = 40.8 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V +A D + + G + + RKV +G G ++ AG +AD
Sbjct: 74 LHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPIG-GRMLGTMAGGAADC 128
>gi|197129148|gb|ACH45646.1| putative proteasome C1 subunit variant 2 [Taeniopygia guttata]
gi|197129149|gb|ACH45647.1| putative proteasome C1 subunit variant 2 [Taeniopygia guttata]
Length = 279
Score = 40.8 bits (95), Expect = 0.092, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V +A D + + G + + RKV +G G ++ AG +AD
Sbjct: 74 LHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPIG-GRMLGTMAGGAADC 128
>gi|322819015|gb|EFZ26269.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
Length = 302
Score = 40.8 bits (95), Expect = 0.093, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V VV+ D + + G V +K+ + + G AG++AD +
Sbjct: 76 GTTIVGVVYKEGVVLGADTRATEGSIVADKRCKKIHYMAPNIMCCG-AGTAADTEAVTNM 134
Query: 75 LEKKLEQYP 83
+ L +
Sbjct: 135 VSANLALHR 143
>gi|197129150|gb|ACH45648.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
Length = 279
Score = 40.8 bits (95), Expect = 0.093, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V +A D + + G + + RKV + G ++ AG +AD
Sbjct: 74 LHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPI-DGRMLGTMAGGAADC 128
>gi|332374408|gb|AEE62345.1| unknown [Dendroctonus ponderosae]
Length = 275
Score = 40.8 bits (95), Expect = 0.094, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + TV N K+ L G AG++AD +
Sbjct: 39 GTTIVGIIYADGVILGADTRATEDTTVADKNCEKIHYLAPNMYCCG-AGTAADTEMTTQM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +LE + R
Sbjct: 98 VSSQLELHRLNTNR 111
>gi|5823090|gb|AAD53036.1|AF115539_1 proteasome delta [Oncorhynchus mykiss]
Length = 223
Score = 40.8 bits (95), Expect = 0.094, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD------- 67
TTI+ V DG VVI D + + G + K+ + I +GS+AD
Sbjct: 23 GTTIMAVEYDGGVVIGADSRTTTGAYIANRVTDKLTPI-HDRIFCCRSGSAADTQAIADV 81
Query: 68 -----AFTLLERLEKKLEQYPNQLLRSS 90
F +E E L Q L ++S
Sbjct: 82 VTYQLGFHSIELDEAPLVQTAANLFKAS 109
>gi|194756194|ref|XP_001960364.1| GF13326 [Drosophila ananassae]
gi|190621662|gb|EDV37186.1| GF13326 [Drosophila ananassae]
Length = 229
Score = 40.8 bits (95), Expect = 0.097, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G V K+ R+ I +GS+AD + +
Sbjct: 15 GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRI-TDKIYCCRSGSAADTQAIADI 73
Query: 75 LEKKLEQYPNQLLRSS--VELAKDWRMDKYLRN--LEAMILIA--DKT---ITLVITGMG 125
+ L Y NQ + + E A ++R Y L A I++A D+ I G
Sbjct: 74 VAYSLNYYENQTNKDALVHEAASEFRNFCYNYRDSLLAGIIVAGYDEERGGQVYSIPLGG 133
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
+ GSG S+ R S EE +KA+ A
Sbjct: 134 MLTR--EACTIGGSGSSFIYGFVREHYRQNMSKEECVDFVKKAVQHA 178
>gi|4506203|ref|NP_002790.1| proteasome subunit beta type-7 proprotein [Homo sapiens]
gi|17380263|sp|Q99436|PSB7_HUMAN RecName: Full=Proteasome subunit beta type-7; AltName:
Full=Macropain chain Z; AltName: Full=Multicatalytic
endopeptidase complex chain Z; AltName: Full=Proteasome
subunit Z; Flags: Precursor
gi|1531533|dbj|BAA07238.1| proteasome subunit z [Homo sapiens]
gi|55859676|emb|CAI10873.1| proteasome (prosome, macropain) subunit, beta type, 7 [Homo
sapiens]
gi|119607988|gb|EAW87582.1| proteasome (prosome, macropain) subunit, beta type, 7, isoform
CRA_a [Homo sapiens]
gi|208967176|dbj|BAG73602.1| proteasome (prosome, macropain) subunit, beta type, 7 [synthetic
construct]
gi|317040128|gb|ADU87629.1| epididymis tissue protein Li 177 [Homo sapiens]
Length = 277
Score = 40.8 bits (95), Expect = 0.097, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 64/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
P +G + +GSG A++ EE + +A IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGI 206
>gi|322693280|gb|EFY85146.1| proteasome subunit beta type 7 precursor [Metarhizium acridum CQMa
102]
Length = 271
Score = 40.8 bits (95), Expect = 0.097, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 21/168 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYISP-QIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TG 123
+ +LE + + R + + L K + +Y + A +++A T + G
Sbjct: 88 ISSQLELHSLSTGRKPRVVTCMTLLKQ-HLFRYQGYIGAYLVVAGCDPSGTHLFTVHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
D L + +GSG AA ++ TQ A+ +A++
Sbjct: 147 STDKL----PYVTMGSGSL----AAMSIFETQWKPHLTQEDAVKLASE 186
>gi|197129147|gb|ACH45645.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
Length = 270
Score = 40.8 bits (95), Expect = 0.097, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V +A D + + G + + RKV +G G ++ AG +AD
Sbjct: 74 LHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPIG-GRMLGTMAGGAADC 128
>gi|149245104|ref|XP_001527086.1| proteasome component PRE2 precursor [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449480|gb|EDK43736.1| proteasome component PRE2 precursor [Lodderomyces elongisporus NRRL
YB-4239]
Length = 282
Score = 40.8 bits (95), Expect = 0.097, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + + G + KV R+ ++ AG +AD
Sbjct: 69 HGTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIRINP-MLLGTMAGGAADC 122
>gi|56753153|gb|AAW24786.1| SJCHGC05978 protein [Schistosoma japonicum]
gi|226471270|emb|CAX70716.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
gi|226488126|emb|CAX75728.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
gi|226488128|emb|CAX75729.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
gi|226488130|emb|CAX75730.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
japonicum]
Length = 264
Score = 40.8 bits (95), Expect = 0.097, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + G V++A D + + G + +K+ + K ++ AG +AD
Sbjct: 60 LHGTTTLAFKYSGGVIVATDSRATAGSYIASGTTKKIIEINKY-LLGTMAGGAADC 114
>gi|255076203|ref|XP_002501776.1| predicted protein [Micromonas sp. RCC299]
gi|226517040|gb|ACO63034.1| predicted protein [Micromonas sp. RCC299]
Length = 229
Score = 40.8 bits (95), Expect = 0.100, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 78/195 (40%), Gaps = 31/195 (15%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+L V + VV A D ++S G ++ + +K+ ++ ++A AG ADA TL +
Sbjct: 21 GGTVLAVAGEDYVVCAADTRMSTGYNILTRDYKKIDQMSDKCVLAS-AGFMADAVTLKKT 79
Query: 75 LEKKLE--QYPNQLLRSSVELAKDWRMDKYLRN------------LEA----MILIADKT 116
L+ + ++ N V A+ Y R L+A + D
Sbjct: 80 LKARCTTYEFQNDKPMGCVSFAQMLSNTLYYRRFFPYYTFNIVAGLDAEGKGAVFTYDAV 139
Query: 117 ITLVIT-----GMGD-VLEP--ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
+ T G G ++ P +N + + A S+A L ++ A ++ + +
Sbjct: 140 GSYERTNYSCQGSGQGLIMPVLDNQLKTVSPLVLPAQSSATPLSESE--AVDLVKDCFAT 197
Query: 169 AADICVYTNHNIVLE 183
A + +YT +E
Sbjct: 198 AGERDIYTGD--TVE 210
>gi|19115456|ref|NP_594544.1| 20S proteasome component beta 2 [Schizosaccharomyces pombe 972h-]
gi|1346786|sp|Q09841|PSB7_SCHPO RecName: Full=Probable proteasome subunit beta type-7; Flags:
Precursor
gi|1039345|emb|CAA91242.1| 20S proteasome component beta 2 [Schizosaccharomyces pombe]
Length = 267
Score = 40.8 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +V+ D + + G + N +K+ + AG AG++AD +
Sbjct: 35 GTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAG-AGTAADTEFVTSM 93
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKT----ITLVIT--G 123
+ +E + R +++ + K + +Y ++ A +++ I G
Sbjct: 94 ISSNIELHSLYTNRKPRVVTALTMLKQ-HLFRYQGHIGAYLVLGGYDCKGPHLFTIAAHG 152
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
D L +A+GSG A+S A E+ ++A+
Sbjct: 153 SSDKL----PYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIE 195
>gi|114626634|ref|XP_520247.2| PREDICTED: hypothetical protein LOC464723 isoform 5 [Pan
troglodytes]
gi|332832851|ref|XP_003312326.1| PREDICTED: hypothetical protein LOC464723 [Pan troglodytes]
gi|12653475|gb|AAH00509.1| Proteasome (prosome, macropain) subunit, beta type, 7 [Homo
sapiens]
gi|48145559|emb|CAG33002.1| PSMB7 [Homo sapiens]
gi|62897575|dbj|BAD96727.1| proteasome beta 7 subunit proprotein variant [Homo sapiens]
gi|62898273|dbj|BAD97076.1| proteasome beta 7 subunit proprotein variant [Homo sapiens]
Length = 277
Score = 40.4 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 64/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
P +G + +GSG A++ EE + +A IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGI 206
>gi|298709479|emb|CBJ31383.1| proteasome subunit beta 2 [Ectocarpus siliculosus]
Length = 323
Score = 40.4 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TTI V +G VV+ D + + G+TV N K+ L G AG+SADA + E
Sbjct: 4 GTTIAGVVFEGGVVLGADTRATGGKTVCDRNCDKIHILASNIACCG-AGTSADAVRITE 61
>gi|301120664|ref|XP_002908059.1| proteasome subunit beta type-5, putative [Phytophthora infestans
T30-4]
gi|262103090|gb|EEY61142.1| proteasome subunit beta type-5, putative [Phytophthora infestans
T30-4]
Length = 288
Score = 40.4 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 6 DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
D ++K TT L +G +V+A D + ++G + +KV + I+A AG
Sbjct: 72 DNEQSLKFAKGTTTLAFIYNGGIVVAVDSRSTMGPFIASQQVKKVNPI-NEYILATLAGG 130
Query: 65 SADAFTLLERLEKKLEQY 82
+AD L + Y
Sbjct: 131 AADCQFWQRNLAVQCRMY 148
>gi|150403635|ref|YP_001330929.1| proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159904582|ref|YP_001548244.1| proteasome endopeptidase complex [Methanococcus maripaludis C6]
gi|302595750|sp|A9A788|PSB_METM6 RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|302595838|sp|A6VK02|PSB_METM7 RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|150034665|gb|ABR66778.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159886075|gb|ABX01012.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
Length = 219
Score = 40.4 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M+ + H M TT + + VV+A D + ++G + A+K+ ++ I
Sbjct: 1 MISNSEYHKEY-MKGTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKI-DDYIAMT 58
Query: 61 FAGSSADAFTLLERLEKKLEQYP 83
AGS DA +L+ + + + Y
Sbjct: 59 IAGSVGDAQSLIRLISAEAKIYK 81
>gi|260940012|ref|XP_002614306.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238852200|gb|EEQ41664.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 269
Score = 40.4 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 17/157 (10%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
I+ + G VVIA D + + G V N K+ RL I AG++AD + + +
Sbjct: 32 IVGCKFAGGVVIAADTRATAGSIVADKNCEKLHRLAP-RIWCAGAGTAADTEMVTQLIAS 90
Query: 78 KLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT----GMGD 126
LE + R +++ L K + KY +L A +++A D T +++ G D
Sbjct: 91 NLELHSMWESRQPRVITALTLLKQ-HLFKYQGHLGAYLIVAGVDPTGAHLMSVQAHGSTD 149
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
V E ++GSG A++ + +E +
Sbjct: 150 VGE----YQSLGSGSLAAMAVLETHWKPDMTRDEAVK 182
>gi|55859677|emb|CAI10874.1| proteasome (prosome, macropain) subunit, beta type, 7 [Homo
sapiens]
Length = 210
Score = 40.4 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR 88
+ LE + +L R
Sbjct: 102 ISSNLELHSLSTGRLPR 118
>gi|315050414|ref|XP_003174581.1| proteasome component PUP1 [Arthroderma gypseum CBS 118893]
gi|311339896|gb|EFQ99098.1| proteasome component PUP1 [Arthroderma gypseum CBS 118893]
Length = 275
Score = 40.4 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 18/170 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + AG AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKIHYIAPSIWCAG-AGTAADTEFTTNL 87
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TG 123
+ +E + R+ + + K + +Y ++ A +++A T + G
Sbjct: 88 ISSNIELHSLSTGRAPRVATCMTMLKQ-HLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI 172
D L + +GSG A+S ++ + +E I + +I A I
Sbjct: 147 STDKL----PYVTMGSGSLAAMSVFESMWKPSLTKDEAIKLTSEAIEAGI 192
>gi|167521858|ref|XP_001745267.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776225|gb|EDQ89845.1| predicted protein [Monosiga brevicollis MX1]
Length = 247
Score = 40.4 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 63/165 (38%), Gaps = 15/165 (9%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + G V+IA D + + G + +KV + ++ AG +AD
Sbjct: 38 HGTTTLGFKYQGGVIIAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADCSYWER 96
Query: 74 RLEKKLEQYP-NQLLRSSVELAKD------WRMDKYLRNLEAMILIADKT--ITLVITGM 124
L + Y R SV A W ++ M+ DK +
Sbjct: 97 YLAMQCRLYELRNGERISVAAASKVLANIVWNYRNMGLSMGTMVCGWDKKGPGLFYVDSD 156
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
G L N + ++GSG +YA A S A+++ R+A+
Sbjct: 157 GTRLT--NNMFSVGSGSTYAYGVLDAGYKWDLSDEEAQDLGRRAI 199
>gi|67621564|ref|XP_667771.1| proteasome B type subunit [Cryptosporidium hominis TU502]
gi|54658945|gb|EAL37551.1| proteasome B type subunit [Cryptosporidium hominis]
Length = 210
Score = 40.4 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 70/176 (39%), Gaps = 35/176 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ ++ +V+A DG+ S G + ARK+ ++ + +GS+AD +
Sbjct: 13 GTTIVALKYKHGLVLAADGRTSTGPIIAFRAARKITQI-TDKVFMCRSGSAADTQIISRY 71
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITG-------- 123
+ + ++ + +E +D ++ K + ++ +I +K L +I G
Sbjct: 72 VRRIVQDHE-------LETGEDTKV-KSVASVARLISYQNKEHLLADMIIAGMDPNGEFK 123
Query: 124 ------MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-------AEEIARKAM 166
G ++E GSG Y S + ++ A ++ AM
Sbjct: 124 VFRIPLGGTLIE--GSYAISGSGSGYIYSMLDSKYHSEMDLDECKSFARDLVSHAM 177
>gi|241951736|ref|XP_002418590.1| macropain subunit, putative; multicatalytic endopeptidase complex
subunit, putative; proteasome component, putative;
proteinase ysce subunit, putative [Candida dubliniensis
CD36]
gi|223641929|emb|CAX43893.1| macropain subunit, putative [Candida dubliniensis CD36]
Length = 285
Score = 40.4 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + + G + KV R+ ++ AG +AD
Sbjct: 72 HGTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIRINP-FLLGTMAGGAADC 125
>gi|323456588|gb|EGB12455.1| hypothetical protein AURANDRAFT_20025 [Aureococcus anophagefferens]
Length = 197
Score = 40.4 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 65/171 (38%), Gaps = 20/171 (11%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK---VRRLGKGNIIAGFAGSSADA- 68
H TT + R DG + D + SLG V + K V R + AGS+ D
Sbjct: 2 YHGTTTVAFRFDGGTMCCVDSRASLGNFVGSYSTEKAIPVSR----TTLGTMAGSAGDCT 57
Query: 69 -----FTLLERLEKKLEQYPNQLLRSSVELAKDW-RMDKYLRNLEAMILIADKTITLVIT 122
+ +L + +P R++ LA R DK L +L ++ D
Sbjct: 58 YWLRLLSATSKLAELETGFPPSARRNAEYLAGLLSRQDKNL-DLSVGTMMFDDATLTYAD 116
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAA 170
G L + A+GSG YA S A A ++A KA+ AA
Sbjct: 117 NSGACLAGH--LFAVGSGSPYAYSVLDAGYRADLNVDEAADLAEKAVRTAA 165
>gi|67588907|ref|XP_665380.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656042|gb|EAL35150.1| hypothetical protein Chro.50424 [Cryptosporidium hominis]
Length = 290
Score = 40.4 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 21/171 (12%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TT L G V++A D + S G + +K+ ++ ++ AG +AD + E
Sbjct: 78 RGTTTLGFIYQGGVILAVDSRASQGNYIASQEVKKIIQI-NDFLLGTMAGGAADC-SYWE 135
Query: 74 RLEKKL----EQYPNQLLRSSVELAKDWRMDKYLR----NLEA--MILIADKT--ITLVI 121
R+ KL E R SV A + + +L A MI DK +
Sbjct: 136 RVLSKLCRLYELRNG--ERISVAGASKMITNIFFHYRAYDLSAGIMIAGFDKDGPHLYYV 193
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G + ++ ++GSG YA + + EE + ++A+ IA
Sbjct: 194 DNEGSRV--KDCKFSVGSGSLYAYGVLDSGYRYDLTDEEAIDLGKRAIVIA 242
>gi|146414580|ref|XP_001483260.1| hypothetical protein PGUG_03989 [Meyerozyma guilliermondii ATCC
6260]
gi|146391733|gb|EDK39891.1| hypothetical protein PGUG_03989 [Meyerozyma guilliermondii ATCC
6260]
Length = 281
Score = 40.4 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + + G + KV R+ ++ AG +AD
Sbjct: 68 HGTTTLAFRFKGGIIVAVDSRATAGNWIASQTVNKVIRINP-MLLGTMAGGAADC 121
>gi|302038355|ref|YP_003798677.1| proteasome subunit beta [Candidatus Nitrospira defluvii]
gi|300606419|emb|CBK42752.1| Proteasome, beta subunit [Candidatus Nitrospira defluvii]
Length = 274
Score = 40.4 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
+ TT+L ++ +IAGD + + G + KV R+ + +A AG++ + +
Sbjct: 54 YGTTVLALKYRDGAIIAGDRRATEGFQIADRRIEKVFRIDDYSAMA-IAGAAGPCIEMAK 112
Query: 74 RLEKKLEQY 82
+ +LE Y
Sbjct: 113 LFQTELEHY 121
>gi|30688785|ref|NP_850641.1| PBB1; endopeptidase/ peptidase/ threonine-type endopeptidase
[Arabidopsis thaliana]
gi|332643797|gb|AEE77318.1| proteasome subunit beta type-7-A [Arabidopsis thaliana]
Length = 267
Score = 40.4 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +L + Q R
Sbjct: 98 VSSQLRLHRYQTGR 111
>gi|305662490|ref|YP_003858778.1| proteasome endopeptidase complex, beta component [Ignisphaera
aggregans DSM 17230]
gi|304377059|gb|ADM26898.1| proteasome endopeptidase complex, beta component [Ignisphaera
aggregans DSM 17230]
Length = 236
Score = 40.4 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT + + VV+A D + + G V N +K+ RL + + I AG ADA TL
Sbjct: 29 YRGTTTVGMALKDFVVLAADKKATAGLYVAHKNVKKIVRLTENSAIT-IAGLVADAQTLA 87
Query: 73 E 73
+
Sbjct: 88 D 88
>gi|50288021|ref|XP_446439.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525747|emb|CAG59366.1| unnamed protein product [Candida glabrata]
Length = 286
Score = 40.4 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +V+A D + + GQ V +KV + ++ AG +AD
Sbjct: 73 HGTTTLAFRFQGGIVVAVDSRATAGQWVASQTVKKVIEINP-FLLGTMAGGAADC 126
>gi|3811395|gb|AAC69911.1| LMP 2 [Mus musculus]
Length = 199
Score = 40.4 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D +VS G V+ K+ L + +I +GS+ADA + +
Sbjct: 1 TTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQ-HIFCALSGSAADAQAIADM 58
>gi|322708975|gb|EFZ00552.1| proteasome subunit beta type 7 precursor [Metarhizium anisopliae
ARSEF 23]
Length = 271
Score = 40.4 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYISP-QIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP 83
+ +LE +
Sbjct: 88 ISSQLELHS 96
>gi|68482384|ref|XP_714824.1| hypothetical protein CaO19.2233 [Candida albicans SC5314]
gi|68482509|ref|XP_714764.1| hypothetical protein CaO19.9775 [Candida albicans SC5314]
gi|46436357|gb|EAK95720.1| hypothetical protein CaO19.9775 [Candida albicans SC5314]
gi|46436420|gb|EAK95782.1| hypothetical protein CaO19.2233 [Candida albicans SC5314]
gi|238883580|gb|EEQ47218.1| proteasome component PRE2 precursor [Candida albicans WO-1]
Length = 285
Score = 40.4 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + + G + KV R+ ++ AG +AD
Sbjct: 72 HGTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIRINP-FLLGTMAGGAADC 125
>gi|312210111|emb|CBX90198.1| similar to proteasome subunit beta type-4 [Leptosphaeria maculans]
Length = 276
Score = 40.4 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T++L + + VVIA D S G + +++R+ ++ GF G +D
Sbjct: 56 GTSVLAAKFNDGVVIAADNLASYGSLARFTDVKRLRK-FNDEVVVGFGGDVSD 107
>gi|207340308|gb|EDZ68701.1| YPR103Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 287
Score = 40.4 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + + G V +KV + ++ AG +AD
Sbjct: 74 HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINP-FLLGTMAGGAADC 127
>gi|156849167|ref|XP_001647464.1| hypothetical protein Kpol_1018p144 [Vanderwaltozyma polyspora DSM
70294]
gi|156118150|gb|EDO19606.1| hypothetical protein Kpol_1018p144 [Vanderwaltozyma polyspora DSM
70294]
Length = 288
Score = 40.4 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + + G V +KV + ++ AG +AD
Sbjct: 74 HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINP-FLLGTMAGGAADC 127
>gi|126309277|ref|XP_001370876.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit, beta
type, 6 [Monodelphis domestica]
Length = 246
Score = 40.4 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 21/111 (18%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD------- 67
TTI+ V+ DG VV+ D + + G + K+ + I +GS+AD
Sbjct: 41 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADA 99
Query: 68 -----AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA 113
+F +E E L L + E+ +R D L A I++A
Sbjct: 100 VTYQLSFHSIELNEPPLVHTAANLFK---EMCYRYRED-----LMAGIIVA 142
>gi|115448935|ref|NP_001048247.1| Os02g0770000 [Oryza sativa Japonica Group]
gi|8671502|dbj|BAA96834.1| beta 1 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|46805414|dbj|BAD16916.1| beta 1 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113537778|dbj|BAF10161.1| Os02g0770000 [Oryza sativa Japonica Group]
gi|125541285|gb|EAY87680.1| hypothetical protein OsI_09094 [Oryza sativa Indica Group]
gi|125583826|gb|EAZ24757.1| hypothetical protein OsJ_08530 [Oryza sativa Japonica Group]
gi|215737147|dbj|BAG96076.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737608|dbj|BAG96738.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765462|dbj|BAG87159.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 246
Score = 40.4 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 19/172 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+A D + S G V + K+ +L I +GS+AD + +
Sbjct: 25 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYIC-RSGSAADTQVISDY 83
Query: 75 LEKKLEQYPNQL-LRSSVELAKDW-RMDKYLRN--LEAMILIA--DK---TITLVITGMG 125
+ L Q+ QL ++V++A + R+ Y L+A +++ DK + G
Sbjct: 84 VRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGG 143
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK------AMSIAAD 171
+L GSG SY S EE A K +++IA D
Sbjct: 144 TILR--QPFAIGGSGSSYLYGLLDHEWKEGMSQEE-AEKFVVKVVSLAIARD 192
>gi|255725326|ref|XP_002547592.1| proteasome component PRE2 precursor [Candida tropicalis MYA-3404]
gi|240135483|gb|EER35037.1| proteasome component PRE2 precursor [Candida tropicalis MYA-3404]
Length = 284
Score = 40.4 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + + G + KV R+ ++ AG +AD
Sbjct: 71 HGTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIRINP-FLLGTMAGGAADC 124
>gi|255948078|ref|XP_002564806.1| Pc22g07900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591823|emb|CAP98078.1| Pc22g07900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 296
Score = 40.4 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 18/84 (21%)
Query: 3 VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK---VRRLGK 54
M D H +K+ H TT L R G +++ D + + G + +K V RL +
Sbjct: 51 AMTDDHSNPSCPIKLAHGTTTLAFRFQGGIIVCTDSRATAGNWIASQTVKKVIPVSRLSR 110
Query: 55 GN----------IIAGFAGSSADA 68
G ++ AG +AD
Sbjct: 111 GEDKKTNEPTPGLLGTMAGGAADC 134
>gi|195628532|gb|ACG36096.1| proteasome subunit beta type 7-A precursor [Zea mays]
Length = 272
Score = 40.4 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + VV+ D + + G V N K+ + G AG++AD + +
Sbjct: 38 GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHFMAPNIYCCG-AGTAADTEAVTDM 96
Query: 75 LEKKLEQYP 83
+ +L+ +
Sbjct: 97 VSSQLQLHR 105
>gi|67526949|ref|XP_661536.1| hypothetical protein AN3932.2 [Aspergillus nidulans FGSC A4]
gi|40740051|gb|EAA59241.1| hypothetical protein AN3932.2 [Aspergillus nidulans FGSC A4]
gi|259481493|tpe|CBF75064.1| TPA: proteasome component Pre2, putative (AFU_orthologue;
AFUA_6G08310) [Aspergillus nidulans FGSC A4]
Length = 296
Score = 40.4 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 18/84 (21%)
Query: 3 VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK---VRRLGK 54
M D H +K+ H TT L R G +++ D + + G + +K V RL +
Sbjct: 51 AMTDDHSNPNCPIKLAHGTTTLAFRFQGGIIVCTDSRATAGNWIASQTVKKVIPVSRLSR 110
Query: 55 GN----------IIAGFAGSSADA 68
G ++ AG +AD
Sbjct: 111 GEDKPGSAPVPGLLGTMAGGAADC 134
>gi|291408365|ref|XP_002720512.1| PREDICTED: proteasome beta 7 subunit [Oryctolagus cuniculus]
Length = 277
Score = 40.4 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR 88
+ LE + +L R
Sbjct: 102 ISSNLELHSLSTGRLPR 118
>gi|242014499|ref|XP_002427927.1| proteasome subunit beta type 6 precursor, putative [Pediculus
humanus corporis]
gi|212512411|gb|EEB15189.1| proteasome subunit beta type 6 precursor, putative [Pediculus
humanus corporis]
Length = 226
Score = 40.4 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI GD + + G V K+ ++ I +GS+AD + +
Sbjct: 26 GTTIMAVEYDGGVVIGGDSRTTTGGYVANRFTDKLTKI-TDRIYCCRSGSAADTQAIADI 84
Query: 75 LEKKL 79
+E +
Sbjct: 85 VEYHM 89
>gi|302595920|sp|A0RXV1|PSB2_CENSY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
Length = 210
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 68/189 (35%), Gaps = 37/189 (19%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + +H TT + ++ VV+ D + S G + N K++R+ + AG
Sbjct: 1 MSNNVEEKILHGTTTVGIKATDGVVLCADMRASAGYFIANNNTMKIQRI-DDHAGLTLAG 59
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD-----KYLRNLEAMILIADKTIT 118
ADA +++ L +Y L R R K L L ++I ++
Sbjct: 60 GVADAQNIVDVL-----RYHASLHRI--------RKQGPIPIKSLARLTSLIFHQNRGYP 106
Query: 119 L---VITGMGDVLEP------------ENGVMAIGSGGSYALSAARALMSTQNSAEE--- 160
++ G D + P E + GSG A +A+E
Sbjct: 107 FMADILMGGFDAVGPALYNIDMFGSVEEKSYVTTGSGSPVAYGTLEEEYRADLTADEAKG 166
Query: 161 IARKAMSIA 169
+A +A+ A
Sbjct: 167 VALRAVKAA 175
>gi|227204261|dbj|BAH56982.1| AT3G27430 [Arabidopsis thaliana]
Length = 254
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +L + Q R
Sbjct: 98 VSSQLRLHRYQTGR 111
>gi|323346321|gb|EGA80611.1| Pre2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 287
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + + G V +KV + ++ AG +AD
Sbjct: 74 HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINP-FLLGTMAGGAADC 127
>gi|259150253|emb|CAY87056.1| Pre2p [Saccharomyces cerevisiae EC1118]
Length = 287
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + + G V +KV + ++ AG +AD
Sbjct: 74 HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINP-FLLGTMAGGAADC 127
>gi|194207140|ref|XP_001918357.1| PREDICTED: similar to proteasome subunit beta5t [Equus caballus]
Length = 299
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 65/172 (37%), Gaps = 32/172 (18%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H H TT L R V+ A D + S G V +RKV + + ++++ +G+SAD
Sbjct: 42 HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGNYVACPASRKVIPVHQ-HLLSTTSGTSAD 100
Query: 68 AFTLLERLEKKLE---QYPNQLLRSSVELAKDWRMDKYLRNLEAMI--------LIA--- 113
T L+++L QL S AK L AM+ +A
Sbjct: 101 CATWYRVLQRELRLRALREGQLP-SVASAAKL---------LSAMMSHYRGLDLCVATAL 150
Query: 114 ---DKT--ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
D++ + G L+ + ++GSG YA + +E
Sbjct: 151 CGWDRSGPALFYVYSDGTRLQ--GDIFSVGSGSPYAYGVLDRGYRYDMTTQE 200
>gi|6325360|ref|NP_015428.1| Pre2p [Saccharomyces cerevisiae S288c]
gi|730375|sp|P30656|PSB5_YEAST RecName: Full=Proteasome component PRE2; AltName: Full=Macropain
subunit PRE2; AltName: Full=Multicatalytic endopeptidase
complex subunit PRE2; AltName: Full=Proteinase YSCE
subunit PRE2; Flags: Precursor
gi|323462946|pdb|3NZJ|K Chain K, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462960|pdb|3NZJ|Y Chain Y, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462974|pdb|3NZW|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462988|pdb|3NZW|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463002|pdb|3NZX|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463016|pdb|3NZX|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|4221|emb|CAA48628.1| proteasome Pre2 subunit [Saccharomyces cerevisiae]
gi|914974|gb|AAB68073.1| Pre2p: Proteasome subunit [Saccharomyces cerevisiae]
gi|1041975|gb|AAB34630.1| Doa3, PRG1, PRE2=beta-type proteasome subunit LMP7 homolog/Hs-X
homolog [Saccharomyces cerevisiae, Peptide, 287 aa]
gi|151942879|gb|EDN61225.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
gi|190408030|gb|EDV11295.1| proteasome subunit [Saccharomyces cerevisiae RM11-1a]
gi|256269062|gb|EEU04399.1| Pre2p [Saccharomyces cerevisiae JAY291]
gi|285815625|tpg|DAA11517.1| TPA: Pre2p [Saccharomyces cerevisiae S288c]
gi|323331341|gb|EGA72759.1| Pre2p [Saccharomyces cerevisiae AWRI796]
gi|323335173|gb|EGA76463.1| Pre2p [Saccharomyces cerevisiae Vin13]
gi|323350231|gb|EGA84378.1| Pre2p [Saccharomyces cerevisiae VL3]
gi|742352|prf||2009376C proteasome:SUBUNIT=Pre2
Length = 287
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + + G V +KV + ++ AG +AD
Sbjct: 74 HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINP-FLLGTMAGGAADC 127
>gi|150400488|ref|YP_001324254.1| proteasome endopeptidase complex [Methanococcus aeolicus
Nankai-3]
gi|302595768|sp|A6UT20|PSB_META3 RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|150013191|gb|ABR55642.1| Proteasome endopeptidase complex [Methanococcus aeolicus
Nankai-3]
Length = 217
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 2 VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
++ + Y M TT + + + +V+A D + ++G + A+K+ ++ +
Sbjct: 1 MIANNDQYKEYMKGTTTVGIVCNDGIVLATDKRATMGNLIADKEAKKLYKI-DDYMAMTI 59
Query: 62 AGSSADAFTL 71
AGS DA +L
Sbjct: 60 AGSVGDAQSL 69
>gi|242047976|ref|XP_002461734.1| hypothetical protein SORBIDRAFT_02g007210 [Sorghum bicolor]
gi|241925111|gb|EER98255.1| hypothetical protein SORBIDRAFT_02g007210 [Sorghum bicolor]
Length = 273
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + VV+ D + + G V N K+ + G AG++AD + +
Sbjct: 38 GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHFMAPNIYCCG-AGTAADTEAVTDM 96
Query: 75 LEKKLEQYP 83
+ +L+ +
Sbjct: 97 VSSQLQLHR 105
>gi|219362877|ref|NP_001136700.1| hypothetical protein LOC100216834 [Zea mays]
gi|194696688|gb|ACF82428.1| unknown [Zea mays]
Length = 273
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + VV+ D + + G V N K+ + G AG++AD + +
Sbjct: 38 GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHFMAPNIYCCG-AGTAADTEAVTDM 96
Query: 75 LEKKLEQYP 83
+ +L+ +
Sbjct: 97 VSSQLQLHR 105
>gi|134045918|ref|YP_001097404.1| proteasome subunit beta [Methanococcus maripaludis C5]
gi|302595749|sp|A4FYA5|PSB_METM5 RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|132663543|gb|ABO35189.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanococcus
maripaludis C5]
Length = 219
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
M+ + H M TT + + VV+A D + ++G + A+K+ ++ I
Sbjct: 1 MISNSEYHKEY-MKGTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKI-DDYIAMT 58
Query: 61 FAGSSADAFTLLERLEKKLEQYP 83
AGS DA +L+ + + + +
Sbjct: 59 IAGSVGDAQSLIRIISAEAKIHK 81
>gi|34783288|gb|AAH17116.2| PSMB7 protein [Homo sapiens]
Length = 256
Score = 40.1 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 64/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 22 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 80
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 81 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 129
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
P +G + +GSG A++ EE + +A IAA I
Sbjct: 130 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGI 185
>gi|323302586|gb|EGA56393.1| Pre2p [Saccharomyces cerevisiae FostersB]
Length = 287
Score = 40.1 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + + G V +KV + ++ AG +AD
Sbjct: 74 HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINP-FLLGTMAGGAADC 127
>gi|116791005|gb|ABK25819.1| unknown [Picea sitchensis]
Length = 273
Score = 40.1 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTIVGLVFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97
Query: 75 LEKKLEQYP 83
+ +LE +
Sbjct: 98 VSSQLELHR 106
>gi|154419010|ref|XP_001582522.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121916758|gb|EAY21536.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 256
Score = 40.1 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L+ +G +V+A D + + GQ + K+ L N+I AG +AD L
Sbjct: 52 HGTTTLSFIYNGGIVVAVDSRATGGQFIFSQTVMKILPLAP-NMIGTMAGGAADCQYWLR 110
Query: 74 RLEKKLEQYP 83
L + ++ +
Sbjct: 111 NLSRLIQLHK 120
>gi|119607989|gb|EAW87583.1| proteasome (prosome, macropain) subunit, beta type, 7, isoform
CRA_b [Homo sapiens]
gi|194382666|dbj|BAG64503.1| unnamed protein product [Homo sapiens]
Length = 142
Score = 40.1 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR 88
+ LE + +L R
Sbjct: 102 ISSNLELHSLSTGRLPR 118
>gi|172260|gb|AAA34906.1| proteosome-related protein [Saccharomyces cerevisiae]
Length = 288
Score = 40.1 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + + G V +KV + ++ AG +AD
Sbjct: 74 HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINP-FLLGTMAGGAADC 127
>gi|70991377|ref|XP_750537.1| proteasome component Pre4 [Aspergillus fumigatus Af293]
gi|66848170|gb|EAL88499.1| proteasome component Pre4, putative [Aspergillus fumigatus Af293]
gi|159124093|gb|EDP49211.1| proteasome component Pre4, putative [Aspergillus fumigatus A1163]
Length = 260
Score = 40.1 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+++ V+ G V IA D S G ++ +++R G+ +I GF+G +D +
Sbjct: 40 GTSVVAVKFGGGVAIAADNLASYGSLARFSDVKRLRVFGESAVI-GFSGDVSDMQHIDRL 98
Query: 75 LEKK 78
LE
Sbjct: 99 LESI 102
>gi|30585303|gb|AAP36924.1| Homo sapiens proteasome (prosome, macropain) subunit, beta type, 7
[synthetic construct]
gi|60653627|gb|AAX29507.1| proteasome beta type subunit 7 [synthetic construct]
Length = 278
Score = 40.1 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 64/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNRSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
P +G + +GSG A++ EE + +A IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGI 206
>gi|30583275|gb|AAP35882.1| proteasome (prosome, macropain) subunit, beta type, 7 [Homo
sapiens]
gi|61361481|gb|AAX42054.1| proteasome subunit beta type 7 [synthetic construct]
Length = 277
Score = 40.1 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 64/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNRSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
+ LE + +L R ++ + K L + I A ++ G DV
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQ-----MLFRYQGYIGAA------LVLGGVDVTG 150
Query: 130 PE------NG------VMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
P +G + +GSG A++ EE + +A IAA I
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGI 206
>gi|328861019|gb|EGG10123.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
Length = 280
Score = 40.1 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + DG V + D + + G V N K+ + G AG++AD +
Sbjct: 36 GTTIVGLIYDGGVCLGADTRATEGPIVADKNCEKIHFISDNIRCCG-AGTAADTEFVTAM 94
Query: 75 LEKKLEQY 82
+ +E +
Sbjct: 95 ISSNIELH 102
>gi|114606767|ref|XP_001167369.1| PREDICTED: similar to LMP2 isoform 1 [Pan troglodytes]
gi|114606769|ref|XP_001167399.1| PREDICTED: similar to LMP2 isoform 2 [Pan troglodytes]
gi|119624058|gb|EAX03653.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2), isoform CRA_a [Homo
sapiens]
gi|123121512|emb|CAM24981.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|123239246|emb|CAM25803.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|123291821|emb|CAM25487.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|168984799|emb|CAQ08453.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|168985580|emb|CAQ10291.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
Length = 196
Score = 40.1 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
Query: 19 LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
+ V DG VV+ D +VS G+ V+ K+ L + I +GS+ADA + + +
Sbjct: 1 MAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHE-RIYCALSGSAADAQAVADMAAYQ 59
Query: 79 LEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLEPE 131
LE + +L ++ + ++ KY +L A +++A D+ + G +
Sbjct: 60 LELHGIELEEPPLVLAAANVVRN-ISYKYREDLSAHLMVAGWDQREGGQVYGTLGGMLTR 118
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE 160
GSG ++ A S EE
Sbjct: 119 QPFAIGGSGSTFIYGYVDAAYKPGMSPEE 147
>gi|115462469|ref|NP_001054834.1| Os05g0187000 [Oryza sativa Japonica Group]
gi|8671504|dbj|BAA96835.1| beta 2 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|46275847|gb|AAS86397.1| 20S proteasome beta subunit [Oryza sativa Japonica Group]
gi|113578385|dbj|BAF16748.1| Os05g0187000 [Oryza sativa Japonica Group]
gi|125551108|gb|EAY96817.1| hypothetical protein OsI_18743 [Oryza sativa Indica Group]
gi|215736977|dbj|BAG95906.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630450|gb|EEE62582.1| hypothetical protein OsJ_17385 [Oryza sativa Japonica Group]
Length = 272
Score = 40.1 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + VV+ D + + G V N K+ + G AG++AD + +
Sbjct: 38 GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 96
Query: 75 LEKKLEQYP 83
+ +L+ +
Sbjct: 97 VSSQLQLHR 105
>gi|302348116|ref|YP_003815754.1| proteasome beta subunit precursor [Acidilobus saccharovorans
345-15]
gi|302328528|gb|ADL18723.1| proteasome beta subunit precursor [Acidilobus saccharovorans
345-15]
Length = 212
Score = 40.1 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
Y H TT + + VV+A D + + G + +K+ +L + +G
Sbjct: 9 ALNRYGRGWHGTTTVGLIAGDYVVLAADKRATAGTLIASRTVKKIVKLTDYAAMT-ISGL 67
Query: 65 SADAFTLLE 73
ADA L +
Sbjct: 68 VADAQALAD 76
>gi|195642050|gb|ACG40493.1| proteasome subunit beta type 7-A precursor [Zea mays]
Length = 273
Score = 40.1 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + VV+ D + + G V N K+ + G AG++AD + +
Sbjct: 38 GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHFMAPNIYCCG-AGTAADTEAVTDM 96
Query: 75 LEKKLEQYP 83
+ +L+ +
Sbjct: 97 VSSQLQLHR 105
>gi|209733846|gb|ACI67792.1| Proteasome subunit beta type-7 precursor [Salmo salar]
Length = 277
Score = 40.1 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 64/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTICGVVFKDGLVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQI 101
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNL--------EAMILI----ADKTITL 119
+ LE + ++L R + ++ L+ + A +++ +
Sbjct: 102 ISSNLELHSLSTSRLPRVATA-------NRMLKQMLFRYQGHIGAALVLGGVDCNGPHLY 154
Query: 120 VI--TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
I G D L + +GSG A++ A+ + R A IAA I
Sbjct: 155 SIYPHGSTDKL----PYVTMGSGSLAAMAVFEDRYKQDMEEEDAKRLVRDA--IAAGI 206
>gi|226503297|ref|NP_001149857.1| LOC100283485 [Zea mays]
gi|194702548|gb|ACF85358.1| unknown [Zea mays]
gi|195612088|gb|ACG27874.1| proteasome subunit beta type 7-A precursor [Zea mays]
gi|195635121|gb|ACG37029.1| proteasome subunit beta type 7-A precursor [Zea mays]
Length = 273
Score = 40.1 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + VV+ D + + G V N K+ + G AG++AD + +
Sbjct: 38 GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHFMAPNIYCCG-AGTAADTEAVTDM 96
Query: 75 LEKKLEQYP 83
+ +L+ +
Sbjct: 97 VSSQLQLHR 105
>gi|209734272|gb|ACI68005.1| Proteasome subunit beta type-7 precursor [Salmo salar]
Length = 277
Score = 40.1 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 64/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTICGVVFKDGLVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQI 101
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNL--------EAMILI----ADKTITL 119
+ LE + ++L R + ++ L+ + A +++ +
Sbjct: 102 ISSNLELHSLSTSRLPRVATA-------NRMLKQMLFRYQGHIGAALVLGGVDCNGPHLY 154
Query: 120 VI--TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
I G D L + +GSG A++ A+ + R A IAA I
Sbjct: 155 SIYPHGSTDKL----PYVTMGSGSLAAMAVFEDRYKQDMEEEDAKRLVRDA--IAAGI 206
>gi|328872141|gb|EGG20508.1| proteasome subunit beta type 5 [Dictyostelium fasciculatum]
Length = 300
Score = 40.1 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 10 AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
++M H TT L +G V++A D + + G V +KV + N++ AG +AD
Sbjct: 82 PIEMAHGTTTLAFVFNGGVIVAVDSKSTQGSYVASRTVKKVIEITP-NLLGTMAGGAADC 140
>gi|195626826|gb|ACG35243.1| proteasome subunit beta type 7-A precursor [Zea mays]
Length = 273
Score = 40.1 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + VV+ D + + G V N K+ + G AG++AD + +
Sbjct: 38 GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHFMAPNIYCCG-AGTAADTEAVTDM 96
Query: 75 LEKKLEQYP 83
+ +L+ +
Sbjct: 97 VSSQLQLHR 105
>gi|2511578|emb|CAA73621.1| multicatalytic endopeptidase [Arabidopsis thaliana]
Length = 273
Score = 40.1 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +L + Q R
Sbjct: 98 VSSQLRLHRYQTGR 111
>gi|124512686|ref|XP_001349476.1| proteasome beta-subunit [Plasmodium falciparum 3D7]
gi|6650323|gb|AAF21797.1| proteasome beta-subunit [Plasmodium falciparum]
gi|23499245|emb|CAD51325.1| proteasome beta-subunit [Plasmodium falciparum 3D7]
Length = 265
Score = 40.1 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+++ ++ ++IA D + S G N ++ ++ + GF+G ADA L E
Sbjct: 9 GTSVIAIKYKHGIMIAADRKASYGSYAKFQNVERIFKI-NNKTVMGFSGELADAQYLHEL 67
Query: 75 LEKK 78
L +K
Sbjct: 68 LTRK 71
>gi|325958081|ref|YP_004289547.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
AL-21]
gi|325329513|gb|ADZ08575.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. AL-21]
Length = 210
Score = 40.1 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 80/197 (40%), Gaps = 21/197 (10%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ ++ TT + V +V A + + S+G + A K+ ++ +I A AGS +D
Sbjct: 2 NDKDRLKGTTTVGVTCKDGIVFATERRASMGNLIAHKVADKIFKI-DDHIGATIAGSVSD 60
Query: 68 AFTLLERLEKKLEQYPNQLLRSS---VELAKDWRMDKYLRN-------LEAMILIADKT- 116
A L+ + ++ Y L + VE A + L ++ ++ D+
Sbjct: 61 AQKLMGYISAEVALYR--LRNGAPMSVEAAAN-MTSNILHASRFYPYYVQTLLGGVDEKG 117
Query: 117 -ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
+ G V+ ++ +++ GSG A + + EE + +A+ A +
Sbjct: 118 PALFSLDPSGGVI--KDLMISTGSGSPVAYGVLEDRYNQEMDIEEGTSVVIRAIKAAMER 175
Query: 173 CVYTNHNIVLETLKVGD 189
Y+ + I + T+ +
Sbjct: 176 DTYSGNGIKVATITKEE 192
>gi|212529024|ref|XP_002144669.1| proteasome component Pup1, putative [Penicillium marneffei ATCC
18224]
gi|210074067|gb|EEA28154.1| proteasome component Pup1, putative [Penicillium marneffei ATCC
18224]
Length = 277
Score = 40.1 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 18/170 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ D VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIYDNGVVIAADTRATSGPIVADKNCEKLHFISP-QIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TG 123
+ +E + R+ + + K + +Y ++ A +++A T + G
Sbjct: 88 ISSNIELHSLSTGRAPRVATCMTMLKQ-HLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE-EIARKAMSIAADI 172
D L + +GSG A+S ++ E IA + +I A I
Sbjct: 147 STDKL----PYVTMGSGSLAAMSVFESMWKPNLDKEGAIAICSEAILAGI 192
>gi|298711428|emb|CBJ32569.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 251
Score = 40.1 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T L + VV+A D ++S G ++M + K+ +L +IA AG D
Sbjct: 42 SPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIAS-AGCKTDV 100
Query: 69 FTLLERLEKKLEQYPNQLLRSSVELA 94
TL + L+ + Y + + + E+A
Sbjct: 101 TTLWKELDVSMTMYDHNMEK---EMA 123
>gi|156365620|ref|XP_001626742.1| predicted protein [Nematostella vectensis]
gi|156213630|gb|EDO34642.1| predicted protein [Nematostella vectensis]
Length = 229
Score = 40.1 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T+L + + VIA D ++S G + ++ KV +L ++ G +G D
Sbjct: 19 SPYAFNGGTVLAISGEDFAVIASDTRLSQGFQIHTRDSPKVYKLTGSTVL-GCSGFHGDC 77
Query: 69 FTLLERLEKKLEQYPNQLLRS--SVELAKDWRMDKYLRN 105
TL + + +L+ Y + ++ +A+ Y R
Sbjct: 78 LTLTKHISARLQMYEHDHGKAMSCTAIAQMLSTMLYYRR 116
>gi|297694719|ref|XP_002824618.1| PREDICTED: proteasome subunit beta type-11-like [Pongo abelii]
Length = 300
Score = 40.1 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 64/172 (37%), Gaps = 32/172 (18%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H H TT L R V+ A D + S G V + KV + + +++ +G+SAD
Sbjct: 42 HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQ-HLLGTTSGTSAD 100
Query: 68 AFTLLERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAMI--------LIA--- 113
T L+++L E QL S AK L AM+ +A
Sbjct: 101 CATWYRVLQRELRLRELRDGQLP-SVASAAKL---------LSAMMSRYRGLDLCVATAL 150
Query: 114 ---DKT--ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
D++ + G L+ + ++GSG YA S +E
Sbjct: 151 CGWDRSGPELFYVYSDGTRLQ--GDIFSVGSGSPYAYGVLDHGYRYDMSTQE 200
>gi|255637923|gb|ACU19278.1| unknown [Glycine max]
Length = 271
Score = 40.1 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 38 GTTIVGLVFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 96
Query: 75 LEKKLEQYPNQLLR 88
+ +L+ + R
Sbjct: 97 VSSQLQLHRYHTGR 110
>gi|50310861|ref|XP_455453.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644589|emb|CAG98161.1| KLLA0F08228p [Kluyveromyces lactis]
Length = 285
Score = 40.1 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 69/185 (37%), Gaps = 26/185 (14%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L R G +++A D + + GQ + +KV + ++ AG +AD
Sbjct: 71 HGTTTLAFRFKGGIIVAVDSRATAGQWIASQTVKKVIEINP-FLLGTMAGGAADCQFWET 129
Query: 74 RLEKKLEQYP-NQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKT---IT 118
L + + + R SV A K L NL MI K
Sbjct: 130 WLGSQCRLHELREKERISVAAAS-----KILSNLVYEYKGAGLSMGTMICGYTKKEGPTI 184
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVY 175
+ G L+ + +GSG ++A A S EE I ++++ AA Y
Sbjct: 185 YYVDSDGTRLQ--GDLFCVGSGQTFAYGVLDANYRWDLSVEEALYIGKRSILAAAHRDAY 242
Query: 176 TNHNI 180
+ +I
Sbjct: 243 SGGSI 247
>gi|18405364|ref|NP_566818.1| PBB1; endopeptidase/ peptidase/ threonine-type endopeptidase
[Arabidopsis thaliana]
gi|82581523|sp|O23710|PSB7A_ARATH RecName: Full=Proteasome subunit beta type-7-A; AltName: Full=20S
proteasome beta subunit B-1; AltName: Full=Proteasome
component FA; AltName: Full=Proteasome component FB;
AltName: Full=Proteasome subunit beta type-2; Flags:
Precursor
gi|3421102|gb|AAC32066.1| 20S proteasome beta subunit PBB1 [Arabidopsis thaliana]
gi|7939516|dbj|BAA95719.1| 20S proteasome beta subunit; multicatalytic endopeptidase
[Arabidopsis thaliana]
gi|21554360|gb|AAM63467.1| 20S proteasome beta subunit PBB1 [Arabidopsis thaliana]
gi|28058828|gb|AAO29958.1| 20S proteasome beta subunit (PBB1) [Arabidopsis thaliana]
gi|30023762|gb|AAP13414.1| At3g27430 [Arabidopsis thaliana]
gi|332643798|gb|AEE77319.1| proteasome subunit beta type-7-A [Arabidopsis thaliana]
Length = 273
Score = 40.1 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +L + Q R
Sbjct: 98 VSSQLRLHRYQTGR 111
>gi|302307794|ref|NP_984534.2| AEL326Cp [Ashbya gossypii ATCC 10895]
gi|299789172|gb|AAS52358.2| AEL326Cp [Ashbya gossypii ATCC 10895]
Length = 285
Score = 40.1 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +V+A D + + GQ + +KV + ++ AG +AD
Sbjct: 72 HGTTTLAFRFQGGIVVAVDSRATAGQWIASQTVKKVIEINP-FLLGTMAGGAADC 125
>gi|295901495|dbj|BAJ07259.1| proteasome subunit, beta type 9-like [Oryzias latipes]
gi|295901526|dbj|BAJ07280.1| proteasome subunit, beta type 9-like [Oryzias latipes]
Length = 217
Score = 40.1 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 20/170 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TTIL DG VVI D + S+ G+ V KV ++ I AGS ADA + +
Sbjct: 16 GTTILAAVFDGGVVIGSDSRASIGGEYVSSKTINKVIQV-HDRIFCCMAGSLADAQAVTK 74
Query: 74 RLEKKLEQYPNQL------LRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVIT 122
+ +L + Q+ + ++ L + +K L+A + A DK V++
Sbjct: 75 TAKFQLSFHSIQMESPPLVISAASVLKQLCYNNK--EELQAGFITAGWDKKKGPQVYVVS 132
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G ++ V GSG +Y A + EE A A+++A
Sbjct: 133 LGGMLI--SQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALA 180
>gi|115400898|ref|XP_001216037.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189978|gb|EAU31678.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 260
Score = 40.1 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T+++ V+ +G V IA D S G + +++R + + I GF+G +D
Sbjct: 40 GTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLR-VFSDSAIVGFSGDVSD 91
>gi|209734998|gb|ACI68368.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 199
Score = 39.7 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADA 68
TTIL V +G V+I D + S+G + + +++ + +L I AGS ADA
Sbjct: 34 GTTILAVTFNGGVIIGSDSRASIGGSYV--SSKTINKLIQVHDRIFCCIAGSLADA 87
>gi|315308142|gb|ADU04474.1| beta-type proteasome 7 subunit [Canis lupus familiaris]
Length = 277
Score = 39.7 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR 88
+ LE + +L R
Sbjct: 102 ISSNLELHSLSTGRLPR 118
>gi|168046797|ref|XP_001775859.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672866|gb|EDQ59398.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 275
Score = 39.7 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G+ V N K+ L G AG++AD + +
Sbjct: 40 GTTIVGLVYKDGVILGADTRATEGEIVCDKNCEKIHYLAPNIYCCG-AGTAADTENVTDM 98
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 99 VSSQLALHR 107
>gi|20260224|gb|AAM13010.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
gi|21387013|gb|AAM47910.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
Length = 274
Score = 39.7 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +L + Q R
Sbjct: 98 VSSQLRLHRYQTGR 111
>gi|332021957|gb|EGI62287.1| Proteasome subunit beta type-7 [Acromyrmex echinatior]
Length = 277
Score = 39.7 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V V++ GD + + V + K+ L G AG++AD E
Sbjct: 39 GTTITGVVYKDGVILGGDTRATEDTIVADKYSLKIHYLAPNMYCCG-AGTAADTEMTTEM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +LE + R
Sbjct: 98 IASQLELHRLNTGR 111
>gi|297801524|ref|XP_002868646.1| hypothetical protein ARALYDRAFT_493925 [Arabidopsis lyrata subsp.
lyrata]
gi|297314482|gb|EFH44905.1| hypothetical protein ARALYDRAFT_493925 [Arabidopsis lyrata subsp.
lyrata]
Length = 274
Score = 39.7 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +L + Q R
Sbjct: 98 VSSQLRLHRYQTGR 111
>gi|15237451|ref|NP_198874.1| PBB2; endopeptidase/ peptidase/ threonine-type endopeptidase
[Arabidopsis thaliana]
gi|30693626|ref|NP_851108.1| PBB2; endopeptidase/ peptidase/ threonine-type endopeptidase
[Arabidopsis thaliana]
gi|82581524|sp|Q7DLS1|PSB7B_ARATH RecName: Full=Proteasome subunit beta type-7-B; AltName: Full=20S
proteasome beta subunit B-2; AltName: Full=Proteasome
component FC; AltName: Full=Proteasome subunit beta
type-2; Flags: Precursor
gi|3421104|gb|AAC32067.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
gi|9758084|dbj|BAB08528.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
gi|332007184|gb|AED94567.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
gi|332007185|gb|AED94568.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
Length = 274
Score = 39.7 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +L + Q R
Sbjct: 98 VSSQLRLHRYQTGR 111
>gi|126294104|ref|XP_001365387.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 277
Score = 39.7 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101
Query: 75 LEKKLEQYP---NQLLR 88
+ LE + +L R
Sbjct: 102 ISSNLELHSLSTGRLPR 118
>gi|21593337|gb|AAM65286.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
Length = 274
Score = 39.7 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +L + Q R
Sbjct: 98 VSSQLRLHRYQTGR 111
>gi|67484636|ref|XP_657538.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56474796|gb|EAL52153.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
Length = 262
Score = 39.7 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 15 ATTILTVR--KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI + K VV+A D + ++G V K+ +L NI G AG++AD
Sbjct: 25 GTTICGLVCDKGQTVVLACDSRATVGPIVADKACMKLHKLAP-NIYCGGAGTAADLTHAT 83
Query: 73 ERLEKKLEQYP---NQLLR--SSVELAK 95
+ KL + Q+ R ++V + K
Sbjct: 84 NFIATKLGVHRFTIGQMPRVDTAVTMLK 111
>gi|297815008|ref|XP_002875387.1| hypothetical protein ARALYDRAFT_904988 [Arabidopsis lyrata subsp.
lyrata]
gi|297321225|gb|EFH51646.1| hypothetical protein ARALYDRAFT_904988 [Arabidopsis lyrata subsp.
lyrata]
Length = 273
Score = 39.7 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +L + Q R
Sbjct: 98 VSSQLRLHRYQTGR 111
>gi|226941102|ref|YP_002796176.1| ATP-dependent protease peptidase subunit [Laribacter hongkongensis
HLHK9]
gi|226716029|gb|ACO75167.1| ATP-dependent protease peptidase subunit [Laribacter hongkongensis
HLHK9]
Length = 190
Score = 39.7 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 66/166 (39%), Gaps = 22/166 (13%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQT--VMKANAR--KVRRLGKGNIIAGFAGSSADAFTL 71
TTI V+K V IA D Q + G T +AR K+ L G+ A +GS+A L
Sbjct: 2 TTITVVKKGREVAIAADCQSTFGDTRLTATHDARSNKIFEL-DGSFFA-ISGSAAHDLVL 59
Query: 72 LERLEKKLEQYPNQLLRSSVE--------------LAKDWRMDKYLRNLEAMILIADKTI 117
L +L+ + E L + D + + +LIA+
Sbjct: 60 QAAL-SRLKSRQFDSRPAIFETFRKLHPKLKDDFFLKTEEEEDDPYESSQMTVLIANPHG 118
Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
+ M +V E N AIGSG YA+ A A A EIA+
Sbjct: 119 IFAVYSMREVYE-FNQFWAIGSGRDYAVGAMWAAWPHLEGAAEIAQ 163
>gi|151944720|gb|EDN62979.1| 22.6 kDa proteasome subunit [Saccharomyces cerevisiae YJM789]
Length = 198
Score = 39.7 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
IL +R V++A V+ G +V+K + K R+L +++ FAG + D E ++
Sbjct: 4 ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMS-FAGEAGDTVQFAEYIQA 62
Query: 78 KLEQYP----NQLLRSSV------ELAKDWRMDK 101
++ Y +L +V ELAK R +
Sbjct: 63 NIQLYSIREDYELSPQAVSSFVRQELAKSIRSRR 96
>gi|147906595|ref|NP_001087535.1| proteasome subunit beta type-7 [Xenopus laevis]
gi|51261485|gb|AAH80076.1| MGC84123 protein [Xenopus laevis]
Length = 277
Score = 39.7 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 63/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + V++ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGIVFKDGVILGADTRATEGMIVADKNCSKIHYIAPNVYCCG-AGTAADTEMTTQM 101
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNL--------EAMILIADKT----ITL 119
+ +E + +L R + ++ L+ + A +++
Sbjct: 102 ISSNMELHSLSTGRLPRVATA-------NRMLKQMLFRYQGYIGAALVLGGVDCSGPHLY 154
Query: 120 VI--TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
I G D L + +GSG A++ A+++ R A IAA I
Sbjct: 155 SIYPHGSTDKL----PYVTMGSGSLAAMAVFEDRYKPDMEEEEAKQLVRNA--IAAGI 206
>gi|6320849|ref|NP_010928.1| Pre1p [Saccharomyces cerevisiae S288c]
gi|730378|sp|P22141|PSB2_YEAST RecName: Full=Proteasome component C11; AltName: Full=Macropain
subunit C11; AltName: Full=Multicatalytic endopeptidase
complex subunit C11; AltName: Full=Proteinase YSCE
subunit 11
gi|3114279|pdb|1RYP|K Chain K, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114293|pdb|1RYP|Y Chain Y, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513422|pdb|1G65|J Chain J, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513436|pdb|1G65|X Chain X, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11514001|pdb|1G0U|J Chain J, A Gated Channel Into The Proteasome Core Particle
gi|11514015|pdb|1G0U|X Chain X, A Gated Channel Into The Proteasome Core Particle
gi|14488815|pdb|1FNT|K Chain K, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488829|pdb|1FNT|Y Chain Y, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|20150386|pdb|1JD2|J Chain J, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non-Covalent Proteasome Inhibitor
gi|20150393|pdb|1JD2|Q Chain Q, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non-Covalent Proteasome Inhibitor
gi|75765709|pdb|1Z7Q|K Chain K, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765723|pdb|1Z7Q|Y Chain Y, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|93279377|pdb|2F16|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279391|pdb|2F16|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279665|pdb|2FNY|J Chain J, Homobelactosin C Bound To The Yeast 20s Proteasome
gi|93279679|pdb|2FNY|X Chain X, Homobelactosin C Bound To The Yeast 20s Proteasome
gi|99032211|pdb|2FAK|J Chain J, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032225|pdb|2FAK|X Chain X, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490852|pdb|2GPL|J Chain J, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490866|pdb|2GPL|X Chain X, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|178847469|pdb|2ZCY|J Chain J, Yeast 20s Proteasome:syringolin A-Complex
gi|178847483|pdb|2ZCY|X Chain X, Yeast 20s Proteasome:syringolin A-Complex
gi|178847511|pdb|3BDM|J Chain J, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847525|pdb|3BDM|X Chain X, Yeast 20s Proteasome:glidobactin A-Complex
gi|190016376|pdb|3D29|J Chain J, Proteasome Inhibition By Fellutamide B
gi|190016390|pdb|3D29|X Chain X, Proteasome Inhibition By Fellutamide B
gi|197725330|pdb|3E47|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725344|pdb|3E47|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939221|pdb|3DY3|J Chain J, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939235|pdb|3DY3|X Chain X, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939249|pdb|3DY4|J Chain J, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939263|pdb|3DY4|X Chain X, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828246|pdb|3GPJ|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828260|pdb|3GPJ|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588330|pdb|3GPT|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588344|pdb|3GPT|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588358|pdb|3GPW|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588372|pdb|3GPW|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588552|pdb|3HYE|J Chain J, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588566|pdb|3HYE|X Chain X, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|298508232|pdb|1VSY|K Chain K, Proteasome Activator Complex
gi|298508246|pdb|1VSY|Y Chain Y, Proteasome Activator Complex
gi|298508448|pdb|3L5Q|O Chain O, Proteasome Activator Complex
gi|298508462|pdb|3L5Q|1 Chain 1, Proteasome Activator Complex
gi|323462945|pdb|3NZJ|J Chain J, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462959|pdb|3NZJ|X Chain X, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462973|pdb|3NZW|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462987|pdb|3NZW|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463001|pdb|3NZX|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463015|pdb|3NZX|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|330689390|pdb|3MG4|J Chain J, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689404|pdb|3MG4|X Chain X, Structure Of Yeast 20s Proteasome With Compound 1
gi|311329|emb|CAA40149.1| proteinase yscE subunit 11 [Saccharomyces cerevisiae]
gi|603604|gb|AAB64545.1| Pre1p: 22.6 kDa subunit of proteinase yscE [Saccharomyces
cerevisiae]
gi|45269505|gb|AAS56133.1| YER012W [Saccharomyces cerevisiae]
gi|190405573|gb|EDV08840.1| 22.6 kDa proteasome subunit [Saccharomyces cerevisiae RM11-1a]
gi|207346028|gb|EDZ72648.1| YER012Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273753|gb|EEU08678.1| Pre1p [Saccharomyces cerevisiae JAY291]
gi|259145918|emb|CAY79178.1| Pre1p [Saccharomyces cerevisiae EC1118]
gi|285811635|tpg|DAA07663.1| TPA: Pre1p [Saccharomyces cerevisiae S288c]
gi|323309365|gb|EGA62582.1| Pre1p [Saccharomyces cerevisiae FostersO]
gi|323333907|gb|EGA75296.1| Pre1p [Saccharomyces cerevisiae AWRI796]
gi|323337919|gb|EGA79158.1| Pre1p [Saccharomyces cerevisiae Vin13]
gi|323348955|gb|EGA83191.1| Pre1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355420|gb|EGA87244.1| Pre1p [Saccharomyces cerevisiae VL3]
Length = 198
Score = 39.7 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
IL +R V++A V+ G +V+K + K R+L +++ FAG + D E ++
Sbjct: 4 ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMS-FAGEAGDTVQFAEYIQA 62
Query: 78 KLEQYP----NQLLRSSV------ELAKDWRMDK 101
++ Y +L +V ELAK R +
Sbjct: 63 NIQLYSIREDYELSPQAVSSFVRQELAKSIRSRR 96
>gi|255570177|ref|XP_002526049.1| proteasome subunit beta type 7,10, putative [Ricinus communis]
gi|223534630|gb|EEF36326.1| proteasome subunit beta type 7,10, putative [Ricinus communis]
Length = 278
Score = 39.7 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 40 GTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 98
Query: 75 LEKKLEQYPNQLLR 88
+ +L+ + R
Sbjct: 99 VSSQLQLHRYHTGR 112
>gi|119467912|ref|XP_001257762.1| proteasome component Pre4, putative [Neosartorya fischeri NRRL 181]
gi|119405914|gb|EAW15865.1| proteasome component Pre4, putative [Neosartorya fischeri NRRL 181]
Length = 260
Score = 39.7 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+++ V+ +G V +A D S G ++ +++R G+ +I GF+G +D +
Sbjct: 40 GTSVVAVKFNGGVAVAADNLASYGSLARFSDVKRLRVFGESAVI-GFSGDVSDMQHIDRL 98
Query: 75 LEKK 78
LE
Sbjct: 99 LESI 102
>gi|155212701|gb|ABT17422.1| proteasome beta subunit [Halorubrum sp. TP009]
Length = 243
Score = 39.7 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 64/178 (35%), Gaps = 35/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + ++ D VV+A D + SLG V + +KV + + AGS + A L+
Sbjct: 49 GTTTVGIKADDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALT-IAGSVSAAQNLIST 107
Query: 75 L--EKKLEQYP--------------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKT-- 116
L E L + LLRS ++ ++ D
Sbjct: 108 LRAETSLYEARRGKDMSMEALSTLTGNLLRSGAFFV-----------VQPILGGVDDEGA 156
Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAAD 171
I +G E E V GSG YAL + A+ IA KA+ A +
Sbjct: 157 HIYSIDALGGTTEEEYTV--TGSGSQYALGVLEQEYDDDVTIDEAKTIAAKAIQSAVE 212
>gi|53133370|emb|CAG32014.1| hypothetical protein RCJMB04_16a5 [Gallus gallus]
Length = 201
Score = 39.7 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGVVFKDGVVLGADTRATEGMVVADKNCSKIHYISSNIYCCG-AGTAADTEMTTQL 101
Query: 75 LEKKLEQYP---NQLLR 88
+ LE + +L R
Sbjct: 102 IASNLELHALSTGRLPR 118
>gi|145521580|ref|XP_001446645.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414123|emb|CAK79248.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 39.7 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 12/146 (8%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+ + TTI+ V DG ++I D + S GQ V A K+ + I +G++A
Sbjct: 9 SKFEPETTGTTIMAVIYDGGLIIGADSRTSSGQFVADRCADKIDYI-HDRIFCLRSGAAA 67
Query: 67 DAFTLLERLEKKLEQYPNQLLR--SSVELAKDWRMDKYLRN--LEAMILIADKT-----I 117
D + + + ++ + +L R + A +R Y + A I++A
Sbjct: 68 DTQIITKHVRYYVDAHAQELGRLPAVATAANLFRNFLYEYKDSMSASIIVAGWDPYKGPQ 127
Query: 118 TLVITGMGDVLEPENGVMAIGSGGSY 143
+ G V+E + + GSG ++
Sbjct: 128 IFTLPLGGSVIEQKWSI--GGSGSTF 151
>gi|307109183|gb|EFN57421.1| hypothetical protein CHLNCDRAFT_56068 [Chlorella variabilis]
Length = 217
Score = 39.7 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VV+ D + S G V K+ L + +GS+AD L
Sbjct: 2 GTTIMAASYDGGVVMGADSRTSTGSYVANRVTDKITPL-TDRVYICRSGSAADTQNLSRY 60
Query: 75 LEKKLEQYPNQL-----LRSSVELAK 95
++ LEQ+ +L ++++ +LA+
Sbjct: 61 VQWFLEQHGMELGDDPEVKTAAKLAQ 86
>gi|320593709|gb|EFX06118.1| proteasome component [Grosmannia clavigera kw1407]
Length = 277
Score = 39.7 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYISP-QIWCAGAGTAADTEFTTAI 87
Query: 75 LEKKLEQYP 83
+ +LE +
Sbjct: 88 ISSQLELHS 96
>gi|319996713|ref|NP_001188447.1| proteasome subunit, beta type 9-like [Oryzias latipes]
gi|18157531|dbj|BAB83846.1| PSMB9-like [Oryzias latipes]
gi|295901528|dbj|BAJ07281.1| proteasome subunit, beta type 9-like [Oryzias latipes]
Length = 217
Score = 39.7 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 20/170 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TTIL DG VVI D + S+ G+ V KV ++ I AGS ADA + +
Sbjct: 16 GTTILAAVFDGGVVIGSDSRASIGGEYVSSKTINKVIQV-HDRIFCCMAGSLADAQAVTK 74
Query: 74 RLEKKLEQYPNQL------LRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVIT 122
+ +L + Q+ + ++ L + +K L+A + A DK V++
Sbjct: 75 TAKFQLSFHSIQMESPPLVISAASVLKQLCYNNK--EELQAGFITAGWDKKKGPQVYVVS 132
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G ++ V GSG +Y A + EE A A+++A
Sbjct: 133 LGGMMI--SQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALA 180
>gi|157325490|ref|YP_001469627.1| HslV family peptidase [Xanthomonas phage Xop411]
gi|157269881|gb|ABV26562.1| HslV family peptidase [Xanthomonas phage Xop411]
Length = 141
Score = 39.7 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 40/165 (24%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTLLE 73
TTI +A D QV+ G +K +K RRL G +I AG DA
Sbjct: 2 TTIAF----DGTSLACDSQVTAGN--IKGKMKKFRRLPGGGVIVVAGEIDLLDDAVQDFL 55
Query: 74 RLE--KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E L Q E A+ R+D+ G + + P
Sbjct: 56 DGEPPAVLRDQDGQ------ERAQFVRLDR-------------SGCWYTSDGEWNKMYPG 96
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
+ AIGSG YAL+ + A+KA+++A + +Y+
Sbjct: 97 D---AIGSGAPYALTCLHLGLD--------AKKAVTVACQLDLYS 130
>gi|224144619|ref|XP_002187722.1| PREDICTED: similar to Proteasome subunit beta type-6 [Taeniopygia
guttata]
Length = 233
Score = 39.7 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 17/168 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + + G + K+ + I +GS+AD + +
Sbjct: 30 GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPV-HDRIFCCRSGSAADTQAVADA 88
Query: 75 LEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIADKT-----ITLVITGM 124
+ +L + +L +R++ L + +Y L A I++A V+
Sbjct: 89 VAYQLAFHSVELEEPPRVRTAARLFQQ-SCYRYREELSAGIIVAGWDPRRGGQVYVVPMG 147
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
G +L GSG SY A S +E +A+++A
Sbjct: 148 GLLLR--QPFAVGGSGSSYIYGFLDATFQPGMSRSQCQEFVARALALA 193
>gi|158300062|ref|XP_320065.4| AGAP009271-PA [Anopheles gambiae str. PEST]
gi|157013820|gb|EAA14913.4| AGAP009271-PA [Anopheles gambiae str. PEST]
Length = 229
Score = 39.7 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D A TTI+ V DG VVI D + S G V K+ +L I +GS+
Sbjct: 8 DWRNAHHSTGTTIMAVEFDGGVVIGADSRTSTGTYVANRVTDKLTKL-TDKIYCCRSGSA 66
Query: 66 ADAFTLLERLEKKLEQYPNQ 85
AD + + + L + NQ
Sbjct: 67 ADTQAIADIVAYSLNYHENQ 86
>gi|156937409|ref|YP_001435205.1| proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
gi|302595692|sp|A8AA46|PSB1_IGNH4 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|156566393|gb|ABU81798.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 198
Score = 39.7 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 24/172 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T + ++ VV+A + ++S G +M ARKV ++G + AG AD +
Sbjct: 5 GATAVGIKVKDGVVLAAERRMSYGGFIMSKAARKVFKVG-DRMGMACAGLYADMQAIARA 63
Query: 75 LEKKLEQYP-NQLLRSSVELAKDWRMDKYL------RNLEAMILIA------DKTITLVI 121
LE ++ Y + + V A + L L ++ D+ V+
Sbjct: 64 LENEIRYYEISNKRKMKVRSAA-----RLLGLILYSNKLFPLMTETVFGGYDDEPRIFVL 118
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAA 170
+G V+E A+G+G A++ S EE +A +++ +A+
Sbjct: 119 DPVGSVIE--EKYSAVGTGAPLAMALLDKEYREDMSLEEAQNLAIESVKVAS 168
>gi|114053073|ref|NP_001040536.1| proteasome subunit beta 7 [Bombyx mori]
gi|95102982|gb|ABF51432.1| proteasome subunit beta 7 [Bombyx mori]
Length = 283
Score = 39.7 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 65/173 (37%), Gaps = 24/173 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + V N +K+ L G AG++AD +
Sbjct: 39 GTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCG-AGTAADTEMTTQS 97
Query: 75 LEKKLEQYPNQLLRSS-VELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV------ 127
+ +LE R+ VE A + L + I A LV+ G+
Sbjct: 98 VASQLELQRLHTGRTVPVETAATLLK-RMLFRYQGHIGAA-----LVLGGVDRTGPHIYC 151
Query: 128 LEPENGV-----MAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
+ P V +GSG A++ A + EE + R A IAA I
Sbjct: 152 IYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDA--IAAGI 202
>gi|296420550|ref|XP_002839832.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636038|emb|CAZ84023.1| unnamed protein product [Tuber melanosporum]
Length = 278
Score = 39.7 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHFISP-QIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP 83
+ +LE +
Sbjct: 88 ISSQLELHS 96
>gi|295672926|ref|XP_002797009.1| proteasome component PRE4 [Paracoccidioides brasiliensis Pb01]
gi|226282381|gb|EEH37947.1| proteasome component PRE4 [Paracoccidioides brasiliensis Pb01]
Length = 260
Score = 39.7 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T+++ V+ +G V IA D S G + +++R ++ GF G +D
Sbjct: 40 GTSVIAVKFNGGVAIAADNLASYGSLARFTDIKRLRSFHNNAVL-GFGGDVSD 91
>gi|162606150|ref|XP_001713590.1| 26S proteasome SU B5 [Guillardia theta]
gi|13794510|gb|AAK39885.1|AF165818_93 26S proteasome SU B5 [Guillardia theta]
Length = 205
Score = 39.7 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+H TT L G ++++ D + S+G V + RK+ + N++ AG +AD F
Sbjct: 9 LHGTTTLAFIFRGGIIVSVDSRASMGSYVGSSKVRKILEISN-NLLGTMAGGAADCF 64
>gi|150247151|ref|NP_001092856.1| proteasome subunit beta type-11 [Bos taurus]
gi|148877297|gb|AAI46055.1| PSMB11 protein [Bos taurus]
gi|296483653|gb|DAA25768.1| proteasome beta 11 subunit [Bos taurus]
Length = 289
Score = 39.7 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 66/176 (37%), Gaps = 30/176 (17%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
H H TT L R V+ A D + S G V +RKV + + +++ +
Sbjct: 37 AFLQTHGPRLAHGTTTLAFRFRHGVIAAADTRSSCGNYVECPASRKVIPVHQ-HLLGTTS 95
Query: 63 GSSADAFTLLERLEKKLE---QYPNQLLRSS-------VELAKDWRMDKYLRNLEAMILI 112
G+SAD T L+++L QL + V +++ R L+ + +
Sbjct: 96 GTSADCVTWYRVLQRELRLRALREGQLPSVAGAAKLLSVMMSR-------YRGLD--LCV 146
Query: 113 A------DKT--ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
A D++ + G L+ + ++GSG YA S +E
Sbjct: 147 ATALCGWDRSGPALFYVYSDGTCLQ--GNIFSVGSGSPYAYGVLDRGYRYDMSTQE 200
>gi|261195200|ref|XP_002624004.1| proteasome component Pup1 [Ajellomyces dermatitidis SLH14081]
gi|239587876|gb|EEQ70519.1| proteasome component Pup1 [Ajellomyces dermatitidis SLH14081]
gi|239610635|gb|EEQ87622.1| proteasome component Pup1 [Ajellomyces dermatitidis ER-3]
gi|327348931|gb|EGE77788.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
Length = 276
Score = 39.3 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYISP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYPNQLLRS 89
+ LE + R+
Sbjct: 88 ISSNLELHALSTGRA 102
>gi|309782585|ref|ZP_07677308.1| 20S proteasome [Ralstonia sp. 5_7_47FAA]
gi|308918676|gb|EFP64350.1| 20S proteasome [Ralstonia sp. 5_7_47FAA]
Length = 190
Score = 39.3 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSA 66
TT + V+KDG V IA D V+ G T + + +++ + G+ + AG++A
Sbjct: 2 TTCVVVKKDGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGDSLIALAGTTA 53
>gi|320169928|gb|EFW46827.1| LMP X [Capsaspora owczarzaki ATCC 30864]
Length = 295
Score = 39.3 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 39/177 (22%), Positives = 63/177 (35%), Gaps = 29/177 (16%)
Query: 6 DKHYAVKMH---ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
D H VK+H TT L + +++A D + + G + +KV + ++ A
Sbjct: 88 DPHSKVKIHIQHGTTTLAFKFKHGIIVAVDSRATGGSYIASGTVKKVIEINPY-LLGTMA 146
Query: 63 GSSADAFTLLERLEKKLEQYP-NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-- 119
G +AD L ++ Y R SV A L A ++ K + L
Sbjct: 147 GGAADCSFWERELARRCRIYELRNKERISVAAA---------SKLLANMVYGYKNMGLSM 197
Query: 120 --VITG-----------MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
+ITG D + ++GSG +YA A + EE
Sbjct: 198 GTMITGWDKRGPELYYVDSDGTRLHGDMFSVGSGSTYAYGVLDAGFRYDMTPEEACE 254
>gi|300708256|ref|XP_002996311.1| hypothetical protein NCER_100618 [Nosema ceranae BRL01]
gi|239605602|gb|EEQ82640.1| hypothetical protein NCER_100618 [Nosema ceranae BRL01]
Length = 230
Score = 39.3 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 76/174 (43%), Gaps = 24/174 (13%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+M TTI+ V+ D V++ D + S+G V K+ ++ NI +GS+AD
Sbjct: 33 PEMTGTTIMAVKYDEGVLVGADCRTSMGTYVSSRFTDKLTKIS-DNIYCCRSGSAADTQA 91
Query: 71 LLERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRN---LEAMILIADKTI---T 118
+ + +++ +++ + ++++ +AK+ + L A ++IA
Sbjct: 92 IAQYVKEVVQRSSFIDKEIPSVKKAAM-IAKE-----IIYKNPSLLAGLIIAGYDTSPKI 145
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
I+ G + E + + GSG +Y L + A E ++A++ A
Sbjct: 146 YNISLGGTITEADWQI--GGSGSAYIYGLCDTLYKDNMTLEEAIEFVKQAITCA 197
>gi|170036732|ref|XP_001846216.1| proteasome subunit beta type 6 [Culex quinquefasciatus]
gi|167879613|gb|EDS42996.1| proteasome subunit beta type 6 [Culex quinquefasciatus]
Length = 227
Score = 39.3 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D A TTI+ V DG VVI D + S G V K+ +L I +GS+
Sbjct: 8 DWRNAHHSTGTTIMAVEFDGGVVIGADSRTSTGTYVANRVTDKLTKL-TDKIYCCRSGSA 66
Query: 66 ADAFTLLERLEKKLEQYPNQ 85
AD + + + L + NQ
Sbjct: 67 ADTQAIADIVAYSLNYHENQ 86
>gi|225424596|ref|XP_002285417.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]
gi|225424598|ref|XP_002285415.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
gi|296081387|emb|CBI16820.3| unnamed protein product [Vitis vinifera]
Length = 273
Score = 39.3 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTIVGLVFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +L+ + R
Sbjct: 98 VSSQLQLHRYHTGR 111
>gi|116779982|gb|ABK21503.1| unknown [Picea sitchensis]
Length = 233
Score = 39.3 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 29/186 (15%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D A TTI+ V +G VV+ D + S G V + K+ +L + +GS+
Sbjct: 4 DWMNAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYLC-RSGSA 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--VITG 123
AD+ + + + L Q+ QL + + K NL ++ +K +I G
Sbjct: 63 ADSQVVSDYVRYFLHQHIIQLGQPA--------TVKVTANLIRLLSYNNKNTLETGLIVG 114
Query: 124 MGDVLE-------PENGVM------AIGSGGSYA---LSAARALMSTQNSAEEIARK--A 165
D E P G M GSG SY L A +++ AE + K +
Sbjct: 115 GWDKYEGGSIYGVPLGGTMLQLPFAIGGSGSSYLYGFLDQAWKEGMSKDEAEALVVKSVS 174
Query: 166 MSIAAD 171
++IA D
Sbjct: 175 LAIARD 180
>gi|307178286|gb|EFN67058.1| Proteasome subunit beta type-7 [Camponotus floridanus]
Length = 277
Score = 39.3 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V V++ GD + + V + K+ L G AG++AD E
Sbjct: 39 GTTIAGVVYKDGVILGGDTRATEDTIVADKYSLKIHYLAPNMYCCG-AGTAADTEMTTEM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +LE + R
Sbjct: 98 IASQLELHRLNTGR 111
>gi|282165069|ref|YP_003357454.1| proteasome subunit beta [Methanocella paludicola SANAE]
gi|302595754|sp|D1Z199|PSB_METPS RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|282157383|dbj|BAI62471.1| proteasome subunit beta [Methanocella paludicola SANAE]
Length = 205
Score = 39.3 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ TT + + + +V+A + + ++G + +A+K+ +L NI AGS D
Sbjct: 2 DDKQYKGTTTVGIICNNGLVLATERRATMGNLIASRDAQKIYQL-TDNIAMTIAGSVGDG 60
Query: 69 FTLLERL--EKKL 79
L L E KL
Sbjct: 61 QRLARMLQAESKL 73
>gi|302825012|ref|XP_002994143.1| hypothetical protein SELMODRAFT_272351 [Selaginella moellendorffii]
gi|300138019|gb|EFJ04804.1| hypothetical protein SELMODRAFT_272351 [Selaginella moellendorffii]
Length = 275
Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L G +++A D + S+GQ + + +K+ + ++ AG +AD
Sbjct: 54 HGTTTLAFEFQGGIIVAADSRASMGQYISSQSVKKILEINPY-LLGTMAGGAADC 107
>gi|167395003|ref|XP_001733546.1| proteasome subunit beta type 7,10 [Entamoeba dispar SAW760]
gi|165894307|gb|EDR22340.1| proteasome subunit beta type 7,10, putative [Entamoeba dispar
SAW760]
Length = 216
Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 15 ATTILTV--RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI + + VV+A D + ++G V K+ +L NI G AG++AD
Sbjct: 25 GTTICGLVCEQGQTVVLACDSRATVGPIVADKACMKLHKLAP-NIYCGGAGTAADLTHAT 83
Query: 73 ERLEKKLEQYP---NQLLR--SSVELAK 95
+ KL + Q+ R ++V + K
Sbjct: 84 NFIATKLGVHRFTIGQMPRVDTAVTMLK 111
>gi|187929025|ref|YP_001899512.1| 20S proteasome A and subunit Bs [Ralstonia pickettii 12J]
gi|241663213|ref|YP_002981573.1| 20S proteasome subunits A and B [Ralstonia pickettii 12D]
gi|187725915|gb|ACD27080.1| 20S proteasome A and B subunits [Ralstonia pickettii 12J]
gi|240865240|gb|ACS62901.1| 20S proteasome A and B subunits [Ralstonia pickettii 12D]
Length = 190
Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSA 66
TT + V+KDG V IA D V+ G T + + +++ + G+ + AG++A
Sbjct: 2 TTCVVVKKDGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGDSLIALAGTTA 53
>gi|118431082|ref|NP_147287.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121727671|sp|Q9YES4|PSB1_AERPE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|116062408|dbj|BAA79472.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 203
Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 28/172 (16%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ T L +R + VV+A D ++S G ++ N +K+ + I FAG D
Sbjct: 1 MSFAGATALGIRVEDGVVLAADKRMSYGGFILSRNFKKIFVI-NDRIGIAFAGLYGDMGG 59
Query: 71 LLERLEKKLEQYPNQLLRSSVELAKDW---RMDKYLRNL-----------EAMILIAD-- 114
L+ +E Q+ +S+E K + K+L +L EA++ D
Sbjct: 60 LVRIVE-------GQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDPG 112
Query: 115 -KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKA 165
+ V+ +G ++E +A G+G + A + S EE A+KA
Sbjct: 113 GEPKLYVLDPLGSIIE--EDYVAAGTGATTAFGLLEHVYKRGMSLEE-AKKA 161
>gi|225708064|gb|ACO09878.1| Proteasome subunit beta type 6 precursor [Osmerus mordax]
Length = 231
Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 17/170 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D + + G + K+ + I +GS+AD + +
Sbjct: 31 GTTIMAVEFDGGVVMGADSRTTTGAYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADA 89
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVITGM 124
+ +L + +L + + L K +Y L A I++A DK +
Sbjct: 90 VTYQLGFHSIELDEAPLVQTAANLFKQ-MCYRYREELMAGIIVAGWDKRRGGQVYTVPMG 148
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
G ++ V GSG SY + T + EE +A+++A +
Sbjct: 149 GMLVR--QPVSVGGSGSSYIYGFMDSNYKTGMTKEECLHFTTQALALAME 196
>gi|322786101|gb|EFZ12710.1| hypothetical protein SINV_07161 [Solenopsis invicta]
Length = 277
Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V V++ GD + + V + K+ L G AG++AD E
Sbjct: 39 GTTIAGVIYKDGVILGGDTRATEDTIVADKYSLKIHFLAPNMYCCG-AGTAADTEMTTEM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +LE + R
Sbjct: 98 ISSQLELHRLNTGR 111
>gi|302781737|ref|XP_002972642.1| hypothetical protein SELMODRAFT_270977 [Selaginella moellendorffii]
gi|300159243|gb|EFJ25863.1| hypothetical protein SELMODRAFT_270977 [Selaginella moellendorffii]
Length = 277
Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L G +++A D + S+GQ + + +K+ + ++ AG +AD
Sbjct: 56 HGTTTLAFEFQGGIIVAADSRASMGQYISSQSVKKILEINPY-LLGTMAGGAADC 109
>gi|211939903|gb|ACJ13432.1| proteasome subunit beta 7 [Helicoverpa armigera]
Length = 281
Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 65/173 (37%), Gaps = 24/173 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + V N +K+ L G AG++AD +
Sbjct: 39 GTTIVGIIFADGVILGADTRATENTVVSDKNCQKIHYLAGNMYCCG-AGTAADTEMTTQT 97
Query: 75 LEKKLEQYPNQLLRSS-VELAKDWRMDKYLRNLEAMILIADKTITLVITG---MGD---V 127
+ +LE R+ VE A + L + I A LV+ G G
Sbjct: 98 VASQLELQRLHTGRTVPVETAATLLK-RMLFRYQGYIGAA-----LVLGGVDRTGPHIYC 151
Query: 128 LEPENGV-----MAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
+ P V +GSG A++ A + EE + R A IAA I
Sbjct: 152 IYPHGSVDKLPYATMGSGSLAAMAVFEAGWKPNMNEEEGKKLVRDA--IAAGI 202
>gi|224473799|gb|ACN49143.1| proteasome subunit beta type 10 [Oryzias dancena]
Length = 275
Score = 39.3 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 29/198 (14%)
Query: 3 VMGDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
+ + H M TTI V VV+ D + + + V K+ + G
Sbjct: 28 LFEEGHPPKPMKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG- 86
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI---- 112
AG++AD + L L + R+ +V + +D + +Y + A +++
Sbjct: 87 AGTAADTEKTTDLLSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVD 145
Query: 113 ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
+ G V + +A+GSG AL A+E+ R ++ A
Sbjct: 146 CTGNHLYTVGPYGSVT--KVPYLAMGSGDLAALGVLEDGFKHDLELEKAKELVRDSIH-A 202
Query: 170 A-----------DICVYT 176
DICV T
Sbjct: 203 GIMSDLGSGNNIDICVIT 220
>gi|168019333|ref|XP_001762199.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686603|gb|EDQ72991.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 275
Score = 39.3 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G+ V N K+ L G AG++AD + +
Sbjct: 40 GTTIVGLIFKDGVILGADTRATEGEIVCDKNCEKIHYLAPNISCCG-AGTAADTENVTDM 98
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 99 VSSQLVLHR 107
>gi|113867391|ref|YP_725880.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Ralstonia
eutropha H16]
gi|497267|gb|AAA21601.1| ORF3 [Ralstonia eutropha H16]
gi|113526167|emb|CAJ92512.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Ralstonia
eutropha H16]
Length = 225
Score = 39.3 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLER 74
TT + VRK V IA D V+ G T + + +++ G+ AG++A +
Sbjct: 2 TTCVVVRKGAEVAIAADALVTFGDTRLSRAYERNQKVFPVGDGFIALAGTTAHFPVMRTL 61
Query: 75 LEKKLEQY----PNQLLRSSVELAKDWRMDKYLRNLE----------AMILIADKTITLV 120
L E+ + + R+ +++ + + D ++ E + LIA+
Sbjct: 62 LAGLGEECRLGSRDDVFRTFLKVHEKLKSDYFVNTKEDEDDPYESSQIVCLIANPAGIFG 121
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIAR 163
+ +V + IGSG +YAL A A+ A EIAR
Sbjct: 122 VYSYREVFS-FDRFWGIGSGRNYALGAMHAVYDRPDLDAGEIAR 164
>gi|255713154|ref|XP_002552859.1| KLTH0D03058p [Lachancea thermotolerans]
gi|238934239|emb|CAR22421.1| KLTH0D03058p [Lachancea thermotolerans]
Length = 287
Score = 39.3 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +V+A D + + G + +KV + ++ AG +AD
Sbjct: 74 HGTTTLAFRFQGGIVVAVDSRATAGSWIASQTVKKVIEINP-FLLGTLAGGAADC 127
>gi|195043591|ref|XP_001991649.1| GH12772 [Drosophila grimshawi]
gi|193901407|gb|EDW00274.1| GH12772 [Drosophila grimshawi]
Length = 300
Score = 39.3 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA--FTLL 72
T+I+ + D V++ D + + G V N K+ RL + G AG++AD TL+
Sbjct: 44 GTSIVGIIFDDGVILGADTRATEGPIVSDKNCSKIHRLQEHIFCCG-AGTAADTEQMTLV 102
Query: 73 ERLEKKLEQYPNQ 85
E L++
Sbjct: 103 TSAELDLQELNTN 115
>gi|225703218|gb|ACO07455.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
Length = 162
Score = 39.3 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADA 68
TTIL V +G V+I D + S+G + +++ + +L I AGS ADA
Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGYYV--SSKTINKLIQVHDRIFCCIAGSLADA 69
>gi|198472043|ref|XP_002133324.1| GA28033 [Drosophila pseudoobscura pseudoobscura]
gi|198139580|gb|EDY70726.1| GA28033 [Drosophila pseudoobscura pseudoobscura]
Length = 238
Score = 39.3 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 68/171 (39%), Gaps = 23/171 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VV+ D + + G V KV R+ N+ +GS+AD L E
Sbjct: 21 GTTIMAAEFDGGVVLGADSRTTAGGHVANRITDKVTRI-TDNVYCCRSGSAADTQELSEV 79
Query: 75 LEKKL---EQYPNQ--LLRSSVELAKDWRMDKYL--RN-LEAMILIADKTIT-----LVI 121
+ + E + + L+R ++A ++R DK R L A I++ I
Sbjct: 80 VSNLMWHREMHTGEKTLVR---DVAAEFR-DKCYNGRKYLYAGIIVGGWDDLHGAQVYNI 135
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIA 169
+ G ++ + GSG Y R EE+ R A+ A
Sbjct: 136 SLGGMMMR--EQLSYGGSGSIYISGMLRDGYRPNMEKEELVLLFRSALKQA 184
>gi|83745858|ref|ZP_00942915.1| hypothetical protein RRSL_04527 [Ralstonia solanacearum UW551]
gi|207742988|ref|YP_002259380.1| peptidase t1a, proteasome beta-subunit; protein [Ralstonia
solanacearum IPO1609]
gi|83727548|gb|EAP74669.1| hypothetical protein RRSL_04527 [Ralstonia solanacearum UW551]
gi|206594385|emb|CAQ61312.1| peptidase t1a, proteasome beta-subunit; protein [Ralstonia
solanacearum IPO1609]
Length = 191
Score = 39.3 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSA 66
TT + V+K G V IA D V+ G T + + +++ + G + AG++A
Sbjct: 2 TTCVVVKKGGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGESLIALAGTTA 53
>gi|307192825|gb|EFN75885.1| Proteasome subunit beta type-7 [Harpegnathos saltator]
Length = 277
Score = 39.3 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + V++ GD + + V + K+ L G AG++AD E
Sbjct: 39 GTTIAGIVYKDGVILGGDTRATEDTIVADKYSLKIHYLAPNMYCCG-AGTAADTEMTTEM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +LE + + R
Sbjct: 98 IASQLELHRLNIGR 111
>gi|300703912|ref|YP_003745514.1| hydrolase [Ralstonia solanacearum CFBP2957]
gi|299071575|emb|CBJ42899.1| putative hydrolase, proteasome hslV type peptidase domain
[Ralstonia solanacearum CFBP2957]
Length = 191
Score = 39.3 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSA 66
TT + V+K G V IA D V+ G T + + +++ + G + AG++A
Sbjct: 2 TTCVVVKKGGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGESLIALAGTTA 53
>gi|281210697|gb|EFA84863.1| proteasome subunit beta type 7 [Polysphondylium pallidum PN500]
Length = 267
Score = 39.3 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V VV+ D + + G V + K+ + G AG++AD
Sbjct: 34 GTTIVGVVYADGVVLGADTRATEGPIVADKDCEKIHYIADNIYCCG-AGTAADTEYATAL 92
Query: 75 LEKKLEQYP 83
+ KL+ +
Sbjct: 93 ISSKLKLHR 101
>gi|194466260|gb|ACF74359.1| threonine endopeptidase [Arachis hypogaea]
Length = 161
Score = 39.3 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L N+ +GS+AD+ + +
Sbjct: 10 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQL-TDNVYVCRSGSAADSQVVSDY 68
Query: 75 LEKKLEQYPNQL-LRSSVELA 94
+ L Q+ QL ++V++A
Sbjct: 69 VRYFLHQHTIQLGQPATVKVA 89
>gi|258564632|ref|XP_002583061.1| proteasome subunit beta type 4 [Uncinocarpus reesii 1704]
gi|237908568|gb|EEP82969.1| proteasome subunit beta type 4 [Uncinocarpus reesii 1704]
Length = 352
Score = 39.3 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T++L V+ +G V IA D S G + +++R + + GF G +D
Sbjct: 211 GTSVLAVKFNGGVAIAADNLASYGSLARFQDVKRLRT-FDNSSVVGFGGDVSD 262
>gi|124802189|ref|XP_001347396.1| 20S proteasome beta subunit, putative [Plasmodium falciparum 3D7]
gi|23494975|gb|AAN35309.1|AE014830_53 20S proteasome beta subunit, putative [Plasmodium falciparum 3D7]
Length = 271
Score = 39.3 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 3 VMGDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
H TT L + +++A D + S+G + N K+ + K NI+
Sbjct: 47 AQTQNKKLFDFHKGTTTLAFKFKDGIIVAVDSRASMGSFISSQNVEKIIEINK-NILGTM 105
Query: 62 AGSSADAFTLLERLEKKLEQY 82
AG +AD + L K ++ Y
Sbjct: 106 AGGAADCLYWEKYLGKIIKIY 126
>gi|313215198|emb|CBY42868.1| unnamed protein product [Oikopleura dioica]
Length = 188
Score = 39.3 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G ++ K+ ++ + I +GS+AD +
Sbjct: 39 GTTIMAVEFDGGVVIGADSRTSAGAYIVNRVTDKLTKVHE-RIYCCRSGSAADTQFIATA 97
Query: 75 LEKKLEQY 82
++ +LE +
Sbjct: 98 VKTRLEGH 105
>gi|124028410|ref|YP_001013730.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
gi|302595717|sp|A2BN24|PSB1_HYPBU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|123979104|gb|ABM81385.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
Length = 204
Score = 39.3 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 15/166 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T + +R G VV+A + +VS G ++ ARKV ++ + AG AD + +
Sbjct: 8 GATAVGIRGAGYVVLAAEKRVSYGGFIISKTARKVYKI-TDYLGLALAGLFADLQAISKI 66
Query: 75 LEKKLEQYP---NQL--LRSSVE-LAKDWRMDKYLRNLEAMI---LIADKT-ITLVITGM 124
L ++E Y + +R+ LA KY L + L AD T V+ +
Sbjct: 67 LRAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEADGTAKLYVMDPL 126
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
G ++E + AIGSG A+ S S ++ A+K ++IAA
Sbjct: 127 GSLIE--DDYAAIGSGAPIAIGILENGYSKDMSVDD-AKK-LAIAA 168
>gi|68510416|gb|AAY98499.1| LMP X [Swiftia exserta]
Length = 268
Score = 39.3 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
GD + ++ H TT L + V++A D + + G + +KV + ++ AG
Sbjct: 53 GDDNIKIQFAHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAG 111
Query: 64 SSADA 68
+AD
Sbjct: 112 GAADC 116
>gi|123296530|emb|CAM26267.1| proteasome (prosome, macropain) subunit beta type 9 (large
multifunctional protease 2) [Homo sapiens]
gi|168983778|emb|CAQ08910.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|168985351|emb|CAQ08499.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
Length = 196
Score = 39.3 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 19 LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
+ V DG VV+ D +VS G+ V+ K+ L + +I +GS+ADA + + +
Sbjct: 1 MAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHE-HIYCALSGSAADAQAVADMAAYQ 59
Query: 79 LEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLEPE 131
LE + +L ++ + ++ KY +L A +++A D+ + G +
Sbjct: 60 LELHGIELEEPPLVLAAANVVRN-ISYKYREDLSAHLMVAGWDQREGGQVYGTLGGMLTR 118
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE 160
GSG ++ A S EE
Sbjct: 119 QPFAIGGSGSTFIYGYVDAAYKPGMSPEE 147
>gi|118346415|ref|XP_976941.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89288453|gb|EAR86441.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 227
Score = 39.3 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 15/167 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + DG V++ D + + G + KV L + I +GS+AD TL
Sbjct: 25 GTSIMALVYDGGVLVGADSRTTSGSYIADRAQDKVDYLHE-RIYCLRSGSAADTQTLCSY 83
Query: 75 LEKKLEQYPNQLL-RSSVELAKDWRMD---KYLRNLEAMILIA---DKT--ITLVITGMG 125
+ L+ + +L R +V+ A + +Y NL A +++A D G
Sbjct: 84 VRYYLDVHSMELQRRPTVKTAAKLFSNLIYQYQDNLSAAVIVAGIDDNEGPSIYACQPSG 143
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
+ + V GSG + S A A+++ + A++ A
Sbjct: 144 SCI--KQQVAIGGSGSGFIFSYVDANFRPNMDLESAKKLVKTALAHA 188
>gi|299066611|emb|CBJ37801.1| putative hydrolase, proteasome hslV type peptidase domain
[Ralstonia solanacearum CMR15]
Length = 191
Score = 39.3 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSA 66
TT + V+KDG V IA D V+ G T + + +++ + G + AG++A
Sbjct: 2 TTCVVVKKDGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGESLIALAGTTA 53
>gi|260820385|ref|XP_002605515.1| hypothetical protein BRAFLDRAFT_286692 [Branchiostoma floridae]
gi|229290849|gb|EEN61525.1| hypothetical protein BRAFLDRAFT_286692 [Branchiostoma floridae]
Length = 258
Score = 39.3 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
+ M T++L V+ DG VV+A D S G N +V ++ ++AG AG AD
Sbjct: 43 PMTM-GTSVLGVKFDGGVVVAADMLGSYGSLARYRNISRVMKVNNTTVLAG-AGDYADYQ 100
Query: 70 TLLERLEKKL 79
L E L++K+
Sbjct: 101 FLKEVLDQKI 110
>gi|17546321|ref|NP_519723.1| hypothetical protein RSc1602 [Ralstonia solanacearum GMI1000]
gi|17428618|emb|CAD15304.1| putative peptidase t1a, proteasome beta-subunit; protein
[Ralstonia solanacearum GMI1000]
Length = 191
Score = 39.3 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSA 66
TT + V+KDG V IA D V+ G T + + +++ + G + AG++A
Sbjct: 2 TTCVVVKKDGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGESLIALAGTTA 53
>gi|182891064|gb|AAI65062.1| Psmb6 protein [Danio rerio]
Length = 223
Score = 39.3 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D + + G + K+ + I +GS+AD + +
Sbjct: 23 GTTIMAVEFDGGVVMGADSRATTGAYIANRVTDKLTPI-HDRIFCCRSGSAADTQAIADA 81
Query: 75 LEKKLEQYPNQLLRSS-VELAKDWRMD---KYLRNLEAMILIA 113
+ +L + +L + V+ A D +Y L A I++A
Sbjct: 82 VTYQLGFHSIELDEAPLVQTAASLFRDMCYRYREELMAGIIVA 124
>gi|224078968|ref|XP_002305699.1| predicted protein [Populus trichocarpa]
gi|118486666|gb|ABK95170.1| unknown [Populus trichocarpa]
gi|222848663|gb|EEE86210.1| predicted protein [Populus trichocarpa]
Length = 274
Score = 39.3 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 40 GTTIVGLVFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 98
Query: 75 LEKKLEQYPNQLLR 88
+ +L+ + R
Sbjct: 99 VSSQLQLHRYHTGR 112
>gi|66356810|ref|XP_625583.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
gi|46226580|gb|EAK87568.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
Length = 290
Score = 39.3 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 21/171 (12%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TT L G V++A D + S G + +K+ ++ ++ AG +AD + E
Sbjct: 78 RGTTTLGFIYQGGVILAVDSRASQGSYIASQEVKKIIQI-NDFLLGTMAGGAADC-SYWE 135
Query: 74 RLEKKL----EQYPNQLLRSSVELAKDWRMDKYLR----NLEA--MILIADKT--ITLVI 121
R+ KL E R SV A + + +L A MI DK +
Sbjct: 136 RVLSKLCRLYELRNG--ERISVAGASKMITNIFFHYRAYDLSAGIMIAGFDKDGPHLYYV 193
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G + ++ ++GSG YA + + EE + ++A+ IA
Sbjct: 194 DNEGSRV--KDCKFSVGSGSLYAYGVLDSGYRYDLTDEEAIDLGKRAIVIA 242
>gi|226292461|gb|EEH47881.1| proteasome component Pre4 [Paracoccidioides brasiliensis Pb18]
Length = 260
Score = 39.3 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T+++ V+ +G V IA D S G + +++R ++ GF G +D
Sbjct: 40 GTSVIAVKFNGGVAIAADNLASYGSLARFTDIKRLRPFHNNAVL-GFGGDVSD 91
>gi|225680768|gb|EEH19052.1| proteasome component PRE4 [Paracoccidioides brasiliensis Pb03]
Length = 260
Score = 39.3 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T+++ V+ +G V IA D S G + +++R ++ GF G +D
Sbjct: 40 GTSVIAVKFNGGVAIAADNLASYGSLARFTDIKRLRPFHNNAVL-GFGGDVSD 91
>gi|62204261|gb|AAH92699.1| Psmb6 protein [Danio rerio]
Length = 232
Score = 39.3 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D + + G + K+ + I +GS+AD + +
Sbjct: 32 GTTIMAVEFDGGVVMGADSRATTGAYIANRVTDKLTPI-HDRIFCCRSGSAADTQAIADA 90
Query: 75 LEKKLEQYPNQLLRSS-VELAKDWRMD---KYLRNLEAMILIA 113
+ +L + +L + V+ A D +Y L A I++A
Sbjct: 91 VTYQLGFHSIELDEAPLVQTAASLFRDMCYRYREELMAGIIVA 133
>gi|224140867|ref|XP_002323800.1| predicted protein [Populus trichocarpa]
gi|118484467|gb|ABK94109.1| unknown [Populus trichocarpa]
gi|222866802|gb|EEF03933.1| predicted protein [Populus trichocarpa]
Length = 274
Score = 38.9 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTIVGLVFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97
Query: 75 LEKKLEQYPNQLLR 88
+ +L+ + R
Sbjct: 98 VSSQLQLHRYHTGR 111
>gi|146165617|ref|XP_001015486.2| proteasome, putative [Tetrahymena thermophila]
gi|146145426|gb|EAR95241.2| proteasome, putative [Tetrahymena thermophila SB210]
Length = 297
Score = 38.9 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 65/180 (36%), Gaps = 26/180 (14%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
G + ++ TT L + G V++A D + S G RK+ + ++ AG
Sbjct: 63 GPERSLMEFKKGTTTLAFKFQGGVIVAVDSRASQGSFDASETVRKIIEI-NDQLLGTMAG 121
Query: 64 SSADAFTLLERLEKKLEQYP-NQLLRSSVELAKDWRMDKYL-------RN----LEAMIL 111
+AD + L + +Y + SV A + L RN + M+
Sbjct: 122 GAADCQFWEQYLAIECRKYQLQNREKVSVAAAS-----RILINILYSYRNHGLSMGCMLT 176
Query: 112 IADKT--ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
D + G + + + + GSG +YA S A E+ RKA+
Sbjct: 177 GWDHEGAQLYYLDNDGQRI--KGNIFSCGSGSTYAYGVLDNEYHYNLSVKEAAELGRKAI 234
>gi|198472075|ref|XP_002133330.1| GA28089 [Drosophila pseudoobscura pseudoobscura]
gi|198139592|gb|EDY70732.1| GA28089 [Drosophila pseudoobscura pseudoobscura]
Length = 238
Score = 38.9 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 68/171 (39%), Gaps = 23/171 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VV+ D + + G V KV R+ N+ +GS+AD L E
Sbjct: 21 GTTIMAAEFDGGVVLGADSRTTAGGHVANRITDKVTRI-TDNVYCCRSGSAADTQELSEV 79
Query: 75 LEKKL---EQYPNQ--LLRSSVELAKDWRMDKYL--RN-LEAMILIADKTIT-----LVI 121
+ + E + + L+R ++A ++R DK R L A I++ I
Sbjct: 80 VSNLMWHREMHTGEKTLVR---DVAAEFR-DKCYNGRKYLYAGIIVGGWDDLHGAQVYNI 135
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIA 169
+ G ++ + GSG Y R EE+ R A+ A
Sbjct: 136 SLGGMMMR--EQLSYGGSGSIYISGMLRDGYRPNMEKEELVLLFRSALKQA 184
>gi|226507970|ref|NP_001140374.1| hypothetical protein LOC100272427 [Zea mays]
gi|194699220|gb|ACF83694.1| unknown [Zea mays]
Length = 395
Score = 38.9 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L N+ +GS+AD + +
Sbjct: 174 GTTIVGVCYEGGVVLGADSRTSTGMYVANRASDKITQL-TDNVYVCRSGSAADTQVISDY 232
Query: 75 LEKKLEQYPNQL-LRSSVELAKDW-RMDKYLRN--LEAMILIA--DK---TITLVITGMG 125
+ L Q+ QL ++V++A + R+ Y L+A +++ DK + G
Sbjct: 233 IRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGG 292
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK------AMSIAAD 171
+L + GSG SY + S EE A K ++++A D
Sbjct: 293 TIL--KQPFAIGGSGSSYLYALLDHEWKEGMSQEE-AEKFVVKVVSLAMARD 341
>gi|47201790|emb|CAF87364.1| unnamed protein product [Tetraodon nigroviridis]
Length = 202
Score = 38.9 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 16 TTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTIL G VVI D + S+ G+ V KV ++ I AGS ADA + +
Sbjct: 1 TTILAATFSGGVVIGSDSRASMGGEYVSSKTINKVIKV-HDRIFCCMAGSLADAQAVTKA 59
Query: 75 LEKKLEQYPNQLLR 88
+ +L + + +
Sbjct: 60 AKFQLSFHRSHTSK 73
>gi|300691342|ref|YP_003752337.1| hydrolase, proteasome hslV type peptidase domain [Ralstonia
solanacearum PSI07]
gi|299078402|emb|CBJ51053.1| putative hydrolase, proteasome hslV type peptidase domain
[Ralstonia solanacearum PSI07]
Length = 191
Score = 38.9 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSA 66
TT + V+KDG V IA D V+ G T + + +++ + G + AG++A
Sbjct: 2 TTCVVVKKDGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGESLIALAGTTA 53
>gi|94469190|gb|ABF18444.1| proteasome subunit beta type 6 precursor-like protein [Aedes
aegypti]
Length = 228
Score = 38.9 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D A TTI+ V DG VVI D + S G V K+ +L I +GS+
Sbjct: 8 DWRKAHHSTGTTIMAVEFDGGVVIGADSRTSTGTYVANRVTDKLTKL-TDKIYCCRSGSA 66
Query: 66 ADAFTLLERLEKKLEQYPNQ 85
AD + + + L + NQ
Sbjct: 67 ADTQAIADIVAYSLNYHENQ 86
>gi|126460611|ref|YP_001056889.1| proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
11548]
gi|302595828|sp|A3MXQ6|PSB2_PYRCJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126250332|gb|ABO09423.1| Proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
11548]
Length = 203
Score = 38.9 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T + ++ VV+A + +VS G + +KV + + AG AD TL +
Sbjct: 8 GATAVGIKTKEGVVLAAEKRVSYGFYTLSTAGKKV-FIVNDRLAIASAGIIADMQTLAKI 66
Query: 75 LEKKLEQYPNQLLR--SSVELAKDWRMDKYLRNL-----EAMILIADKT--ITLVITGMG 125
L+ + Y ++ R S +AK + + R E ++ D +V+ +G
Sbjct: 67 LKLNAKAYELEMKRKPSVHAMAKLLSVVMFSRRFMPFFAEVLVGGIDDEGPHLIVMDPLG 126
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIA 169
++E + A+G+G A++ A A+++A +A+ A
Sbjct: 127 SLIE--DNYAALGTGAKLAIAIIDASYKPDMSLQDAKKLAVQALKAA 171
>gi|45184842|ref|NP_982560.1| AAR019Wp [Ashbya gossypii ATCC 10895]
gi|44980451|gb|AAS50384.1| AAR019Wp [Ashbya gossypii ATCC 10895]
Length = 195
Score = 38.9 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
IL +R V++A V+ G +V+KA+ K R+L ++++ F+G DA E ++
Sbjct: 4 ILGIRVQDSVILATSKAVTRGISVLKADDDKTRQLSPHSLMS-FSGEPGDAVQFSEYIQA 62
Query: 78 KLEQY------------PNQLLRSSVELAKDWRMDK 101
++ Y +RS ELAK R K
Sbjct: 63 NMQLYMIRENYELSPQAQASYVRS--ELAKSLRSRK 96
>gi|297841301|ref|XP_002888532.1| hypothetical protein ARALYDRAFT_475769 [Arabidopsis lyrata subsp.
lyrata]
gi|297334373|gb|EFH64791.1| hypothetical protein ARALYDRAFT_475769 [Arabidopsis lyrata subsp.
lyrata]
Length = 273
Score = 38.9 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 98 VSSQLRLHR 106
>gi|195024021|ref|XP_001985794.1| GH20892 [Drosophila grimshawi]
gi|193901794|gb|EDW00661.1| GH20892 [Drosophila grimshawi]
Length = 254
Score = 38.9 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
+T++ +R +V+ + + + ++ RK+ +L +++ FAG +ADA L++
Sbjct: 30 RGSTVVALRTKDCIVMGVEKRA-VEPLQIERTVRKIIKL-DDHLVITFAGLTADARILVK 87
Query: 74 RLEKKLEQYPNQLLR-SSVE 92
R +++ + + R +SVE
Sbjct: 88 RAQEEAQNHRRNFERPASVE 107
>gi|157113425|ref|XP_001657823.1| proteasome subunit beta type 6,9 [Aedes aegypti]
gi|108877753|gb|EAT41978.1| proteasome subunit beta type 6,9 [Aedes aegypti]
Length = 228
Score = 38.9 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D A TTI+ V DG VVI D + S G V K+ +L I +GS+
Sbjct: 8 DWRKAHHSTGTTIMAVEFDGGVVIGADSRTSTGTYVANRVTDKLTKL-TDKIYCCRSGSA 66
Query: 66 ADAFTLLERLEKKLEQYPNQ 85
AD + + + L + NQ
Sbjct: 67 ADTQAIADIVAYSLNYHENQ 86
>gi|301618803|ref|XP_002938794.1| PREDICTED: proteasome subunit beta type-7-like [Xenopus (Silurana)
tropicalis]
Length = 277
Score = 38.9 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 63/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + V++ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGIVFKDGVILGADTRATEGMIVADKNCSKIHYIAPNVYCCG-AGTAADTEMTTQM 101
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNL--------EAMILIADKT----ITL 119
+ +E + +L R + ++ L+ + A +++
Sbjct: 102 ISSNMELHSLSTGRLSRVATA-------NRMLKQMLFRYQGYIGAALVLGGVDCTGPHLY 154
Query: 120 VI--TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
I G D L + +GSG A++ A+++ R A IAA I
Sbjct: 155 SIYPHGSTDKL----PYVTMGSGSLAAMAVFEDRYKPDMEEEEAKQLVRDA--IAAGI 206
>gi|169601776|ref|XP_001794310.1| hypothetical protein SNOG_03762 [Phaeosphaeria nodorum SN15]
gi|160706006|gb|EAT88967.2| hypothetical protein SNOG_03762 [Phaeosphaeria nodorum SN15]
Length = 309
Score = 38.9 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T++L + VVIA D S G + +++R+ ++ GF G +D L+R
Sbjct: 89 GTSVLAAKFKDGVVIAADNLASYGSLARFTDVKRLRK-FNDEVVVGFGGDVSD-MQYLDR 146
Query: 75 LEKKL---EQYPNQ 85
L L E Y +
Sbjct: 147 LLNSLDIRETYSSN 160
>gi|321469684|gb|EFX80663.1| hypothetical protein DAPPUDRAFT_303852 [Daphnia pulex]
Length = 276
Score = 38.9 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L + G +V+A D + + GQ + + +K+ + ++ AG +AD
Sbjct: 68 HGTTTLGFKYQGGIVLAVDSRATGGQYIGSGSVKKIIEI-NDFLLGTMAGGAADC 121
>gi|281205008|gb|EFA79202.1| anaphase promoting complex subunit 1 [Polysphondylium pallidum PN500]
Length = 1500
Score = 38.9 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 61 FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR-NLEAMILIADKTITL 119
FAGS L L + N+LL+ V LAK R+D+ LR +E + +A +++L
Sbjct: 1114 FAGS------LNSNTADILMVWTNKLLKYQVHLAKQKRVDRSLRTTVETCLGVASISVSL 1167
Query: 120 VITGMGDV 127
V+ G GDV
Sbjct: 1168 VMAGTGDV 1175
>gi|195429280|ref|XP_002062691.1| GK19557 [Drosophila willistoni]
gi|194158776|gb|EDW73677.1| GK19557 [Drosophila willistoni]
Length = 362
Score = 38.9 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 24/177 (13%)
Query: 8 HYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
H ++M H TT L V++ D + + GQ + +K+ L ++ AG
Sbjct: 61 HCNIQMDFAHGTTTLGFIFRNGVILCADSRATSGQYIGSQTMKKIVEL-NDYMLGTLAGG 119
Query: 65 SADAFTLLERLEKKLEQYPNQL-LRSSVELAKDWRMDKYLRNLEA-----------MILI 112
+AD L ++ + + R +V+ A + + N+ A M+
Sbjct: 120 AADCVYWDRVLARECRLHELRFKRRMTVDTAA-----RRMCNISAEYKGMGLVMGMMLAG 174
Query: 113 ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAM 166
D +I + + V ++GSG YAL T A ++AR+A+
Sbjct: 175 YDNDGPKLIYVDSEGMRSHANVFSVGSGSPYALGVLDTGYKWDITDQEAYDLARRAI 231
>gi|297788966|ref|XP_002862504.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308064|gb|EFH38762.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 273
Score = 38.9 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 98 VSSQLRLHR 106
>gi|224473832|gb|ACN49171.1| antigen processing proteasome-associated protein [Oryzias
luzonensis]
Length = 217
Score = 38.9 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 22/171 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TTIL DG VVI D + S+ G+ V KV ++ I AGS ADA + +
Sbjct: 16 GTTILAAVFDGGVVIGSDSRASIGGEYVSSKTINKVIQV-HDRIFCCMAGSLADAQAVTK 74
Query: 74 RLEKKLEQYPNQL------LRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVIT 122
+ +L + Q+ + ++ L + +K L+A + A D+ V++
Sbjct: 75 TAKFQLSFHSIQMESPPLVISAASVLKQLCYNNK--EELQAGFITAGWDRKKGPQVYVVS 132
Query: 123 GMGDVL-EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G ++ +P V GSG +Y A + EE A A+++A
Sbjct: 133 LGGMLIGQP---VTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALA 180
>gi|291226741|ref|XP_002733349.1| PREDICTED: proteasome beta 9 subunit isoform 1 proprotein-like
[Saccoglossus kowalevskii]
Length = 230
Score = 38.9 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 15/108 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + VVI GD + + G + + K+ + +I +GS AD L +
Sbjct: 30 GTTIMATEFNDGVVIGGDTRTTSGTIITHKVSDKITEI-TDSIYCARSGSLADTQALADI 88
Query: 75 LEKKLEQYP----NQLLRSSVE-----LAKDWRMDKYLRNLEAMILIA 113
++ ++ Y + S V L+ WR ++A +++A
Sbjct: 89 IKYYMDMYRYYIDTNPMVSVVAKQFQSLSYTWRD-----KIQAGLIVA 131
>gi|242398879|ref|YP_002994303.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
gi|302595703|sp|C6A2V9|PSB1_THESM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome
core protein PsmB 1; Flags: Precursor
gi|242265272|gb|ACS89954.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
Length = 207
Score = 38.9 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
K+ TT + + VV+ D + SLG V+ K+ ++ +AG AG+ D +L
Sbjct: 6 KIKGTTTVGIVCKDGVVLTADRRASLGNMVISKGVTKIFQVDDHLALAG-AGAVGDILSL 64
Query: 72 LE--RLEKKL 79
+ R E KL
Sbjct: 65 VRALRAESKL 74
>gi|255717008|ref|XP_002554785.1| KLTH0F13750p [Lachancea thermotolerans]
gi|238936168|emb|CAR24348.1| KLTH0F13750p [Lachancea thermotolerans]
Length = 195
Score = 38.9 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
IL +R V++A V+ G +V+KA+ K R+L + +++ ++G + DA E ++
Sbjct: 4 ILGIRVQNTVILATSKAVTRGISVLKADDDKTRQLSE-HVLMAYSGEAGDAVQFSEYIQA 62
Query: 78 KLEQY----PNQLLRSSV------ELAKDWRMDK 101
++ Y +L +V ELAK R +
Sbjct: 63 NIQLYSIRENYELSPKAVSSFVRQELAKSIRSRR 96
>gi|328774191|gb|EGF84228.1| hypothetical protein BATDEDRAFT_15564 [Batrachochytrium
dendrobatidis JAM81]
Length = 214
Score = 38.9 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ VV+A D + ++G + K+ ++ + I +GS+AD + +
Sbjct: 14 GTTIMAVQFADGVVVAADSRTTMGSYIANRVTDKLTQIHE-RIFCCRSGSAADTQAVADM 72
Query: 75 LEKKLEQYP---NQLLRSSVELA 94
+ +L+ + L + VE A
Sbjct: 73 VHYQLQVFSVTEGVLPK--VETA 93
>gi|297838367|ref|XP_002887065.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332906|gb|EFH63324.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 273
Score = 38.9 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 98 VSSQLRLHR 106
>gi|160331155|ref|XP_001712285.1| prsB5 [Hemiselmis andersenii]
gi|159765732|gb|ABW97960.1| prsB5 [Hemiselmis andersenii]
Length = 219
Score = 38.9 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
H TT L ++++ D + S+G+ + +N RKV + ++ AG +AD F
Sbjct: 15 WHGTTTLAFVCQSGIIVSVDSRASMGKYIGSSNVRKVIPI-NDYMLGTMAGGAADCF 70
>gi|9910839|sp|Q9UXF3|PSB2_SULSO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
Length = 208
Score = 38.9 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 20/167 (11%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAFTL 71
+ TT + +R + V++A D + S G V RKV L I AGS AD +
Sbjct: 12 LKGTTTVGIRVNDGVILAADRRASAGFFVANKMVRKV--LYITDKIGITTAGSVADLQFI 69
Query: 72 LERLEKKLEQYPNQLLR--------SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVI 121
+ L+ + N + + + LA KY + +++ D+ +
Sbjct: 70 YDVLKNIY--HYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYDDQPRLFNL 127
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKA 165
+GD+ E +A GSG A+ + T + A ++A++A
Sbjct: 128 DYLGDITE--ENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRA 172
>gi|288561233|ref|YP_003424719.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
gi|302595755|sp|D3E0A3|PSB_METRM RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|288543943|gb|ADC47827.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
Length = 207
Score = 38.9 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT + + VV A + + S+G V A K+ ++ +I A AGS ADA TL+
Sbjct: 7 FEGTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKI-DNHIAATIAGSVADAQTLM 65
>gi|327289327|ref|XP_003229376.1| PREDICTED: proteasome subunit beta type-11-like [Anolis
carolinensis]
Length = 372
Score = 38.9 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
H TT L R VV+A D + S G + ++RKV L + +++A +G+SAD T
Sbjct: 82 HGTTTLAFRCSHGVVVAADTRSSCGSLISDPSSRKVITLHR-HLLATTSGTSADCAT 137
>gi|321470713|gb|EFX81688.1| hypothetical protein DAPPUDRAFT_303318 [Daphnia pulex]
Length = 277
Score = 38.9 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L + G +V+A D + + GQ + + +K+ + ++ AG +AD
Sbjct: 69 HGTTTLGFKYQGGIVLAVDSRATGGQYIGSGSVKKIIEI-NDFLLGTMAGGAADC 122
>gi|126179146|ref|YP_001047111.1| proteasome endopeptidase complex [Methanoculleus marisnigri JR1]
gi|302595840|sp|A3CUS9|PSB_METMJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|125861940|gb|ABN57129.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanoculleus marisnigri
JR1]
Length = 214
Score = 38.9 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 18/171 (10%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M TT + + DG VV+A + + ++G + A+K+ ++ I AG DA L+
Sbjct: 9 MKGTTTVGLIFDGGVVLATEMRATMGNMIASKRAKKIYQITP-RIGLTTAGGVGDAQQLV 67
Query: 73 ERLE---KKLEQYPNQLLR--SSVELAKDW----RMDKYLRNLEAMILIADKT--ITLVI 121
L+ E + + ++ L ++ R Y L ++ D +
Sbjct: 68 RILQVECNLFEMRRGKTMSVGAASTLLSNYLNQNRYYPYYVQL--LMGGFDDEGPSVYSV 125
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIA 169
MG + E ++A GSG +A ++ A+++A +A+ A
Sbjct: 126 DAMGGATK-EEDIVATGSGSPFAYGVLEDQYRAGMKEDDAKDLAVRAVRSA 175
>gi|3116216|dbj|BAA25923.1| proteasome subunit [Dictyostelium discoideum]
Length = 213
Score = 38.9 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V DG V++ D + + G + K+ + + I +GS+AD + +
Sbjct: 14 GTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPIHE-RIYCCRSGSAADTQAISDY 72
Query: 75 LEKKLEQYPNQL 86
+ LE + ++L
Sbjct: 73 VRYYLEMHTSEL 84
>gi|302831986|ref|XP_002947558.1| hypothetical protein VOLCADRAFT_57026 [Volvox carteri f.
nagariensis]
gi|300267422|gb|EFJ51606.1| hypothetical protein VOLCADRAFT_57026 [Volvox carteri f.
nagariensis]
Length = 242
Score = 38.9 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
TTI+ G V+ DG+VS+G +M + K+ L + + +GS+ D
Sbjct: 17 GTTIVACTYKGGAVLGADGRVSIGNYIMNRASNKIAPLSEYIFLC-RSGSAPD 68
>gi|255988227|gb|ACU51028.1| 20S proteasome beta5 subunit [Conocephalum conicum]
Length = 280
Score = 38.9 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+H TT L V++A D + S+G + + +K+ + ++ AG +AD
Sbjct: 57 PLHGTTTLAFVFKEGVIVAADSRASMGNYISSQDVKKILEINPY-LLGTMAGGAADCQFW 115
Query: 72 LERLEKKLEQYP-NQLLRSSV 91
L + + R SV
Sbjct: 116 QRNLGTRCRLHELGNKRRISV 136
>gi|14594921|emb|CAC43321.1| putative beta proteasome subunit [Nicotiana tabacum]
Length = 205
Score = 38.9 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + V++ D + + G V N K+ + G AG++AD + +
Sbjct: 40 GTTIVGLIFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 98
Query: 75 LEKKLEQYPNQLLR 88
+ +L+ + R
Sbjct: 99 VSSQLKLHRFHTGR 112
>gi|221055227|ref|XP_002258752.1| 20S proteasome beta subunit [Plasmodium knowlesi strain H]
gi|193808822|emb|CAQ39524.1| 20S proteasome beta subunit, putative [Plasmodium knowlesi strain
H]
Length = 270
Score = 38.9 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ H TT L + +++A D + S+G + N K+ + K NI+ AG
Sbjct: 48 TKNNKLFDFHKGTTTLAFKFKDGIIVAVDSRASMGSFISSQNVEKIIEINK-NILGTMAG 106
Query: 64 SSADAFTLLERLEKKLEQY 82
+AD + L K ++ Y
Sbjct: 107 GAADCLYWEKYLGKIIKIY 125
>gi|332796202|ref|YP_004457702.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
gi|332693937|gb|AEE93404.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
Length = 209
Score = 38.5 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 64/168 (38%), Gaps = 19/168 (11%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAFTL 71
TT + + VV+A D + S G V RK+ L NI AGS AD L
Sbjct: 9 WKGTTTVGILAKDGVVLAADRRASEGFFVANKMVRKI--LYITDNIGITTAGSVADLQFL 66
Query: 72 LERLEKKLEQYP---NQ---LLRS-SVELAKDWRMDKYLRNLEAMILIA-DKT-ITLVIT 122
L+ L Y +++ + LA +KY L +++ D +
Sbjct: 67 YYVLKN-LYHYNYISGNRPTTVKALATYLANTLSQNKYFPYLVQILIGGYDTQPRLYNLD 125
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
GD+ E +A GSG A+ +A++ AM IAA
Sbjct: 126 YFGDMTE--EKYVATGSGSPVAMGVLEDEYREDLTADQ----AMDIAA 167
>gi|66827667|ref|XP_647188.1| proteasome subunit beta type 6 [Dictyostelium discoideum AX4]
gi|74897489|sp|Q55GJ6|PSB6_DICDI RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Differentiation-associated proteasome subunit 1;
Short=DAPS-1; Flags: Precursor
gi|60475212|gb|EAL73147.1| proteasome subunit beta type 6 [Dictyostelium discoideum AX4]
Length = 214
Score = 38.5 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V DG V++ D + + G + K+ + + I +GS+AD + +
Sbjct: 14 GTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPIHE-RIYCCRSGSAADTQAISDY 72
Query: 75 LEKKLEQYPNQL 86
+ LE + ++L
Sbjct: 73 VRYYLEMHTSEL 84
>gi|226509555|ref|NP_001140929.1| hypothetical protein LOC100273007 [Zea mays]
gi|194701802|gb|ACF84985.1| unknown [Zea mays]
Length = 272
Score = 38.5 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ D VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIYDNGVVIAADTRATSGPIVADKNCEKLHYIAP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP 83
+ +E +
Sbjct: 88 ISSNIELHS 96
>gi|159129028|gb|EDP54142.1| proteasome component Pup1, putative [Aspergillus fumigatus A1163]
Length = 272
Score = 38.5 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 18/170 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ D VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDNGVVIAADTRATSGPIVADKNCEKLHYIAP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT----G 123
+ +E + + R + + L K + +Y ++ A +++A D T + T G
Sbjct: 88 ISSNIELHSLSTGRPPRVVTCMTLLKQ-HLFRYQGHIGAYLVVAGVDPTGVGLFTVHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI 172
D L + +GSG A+S ++ Q + EE IA + +I A I
Sbjct: 147 STDKL----PYVTMGSGSLAAMSVFESMWKPQLNREEAIALCSEAIKAGI 192
>gi|310800363|gb|EFQ35256.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 270
Score = 38.5 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYIAP-QIWCAGAGTAADTEFTTAI 87
Query: 75 LEKKLEQYP 83
+ LE +
Sbjct: 88 ISSNLELHS 96
>gi|115399202|ref|XP_001215190.1| proteasome component PUP1 precursor [Aspergillus terreus NIH2624]
gi|114192073|gb|EAU33773.1| proteasome component PUP1 precursor [Aspergillus terreus NIH2624]
Length = 272
Score = 38.5 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ D VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIYDNGVVIAADTRATSGPIVADKNCEKLHYIAP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP 83
+ +E +
Sbjct: 88 ISSNIELHS 96
>gi|119185118|ref|XP_001243375.1| hypothetical protein CIMG_07271 [Coccidioides immitis RS]
Length = 261
Score = 38.5 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T+++ V+ DG V IA D S G + +++R + + + GF G +D
Sbjct: 40 GTSVVAVKFDGGVAIAADNLASYGSLARFQDVKRLR-VFDNSSVVGFGGDVSD 91
>gi|313230140|emb|CBY07844.1| unnamed protein product [Oikopleura dioica]
Length = 240
Score = 38.5 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G ++ K+ ++ + I +GS+AD +
Sbjct: 39 GTTIMAVEFDGGVVIGADSRTSAGAYIVNRVTDKLTKVHE-RIYCCRSGSAADTQFIATA 97
Query: 75 LEKKLEQY 82
++ +LE +
Sbjct: 98 VKTRLEGH 105
>gi|219118411|ref|XP_002179979.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408236|gb|EEC48170.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 201
Score = 38.5 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + G VV+ D + + G V + N K+ L G AG++AD
Sbjct: 7 GTTIVGLTFAGGVVLGADTRATGGTEVAEKNCEKIHYLAPNMYCCG-AGTAADTEKTTAL 65
Query: 75 LEKKLE 80
+ +LE
Sbjct: 66 ISSQLE 71
>gi|18859271|ref|NP_571227.1| proteasome subunit beta type-6 [Danio rerio]
gi|2654062|gb|AAB87681.1| proteasome subunit Y [Danio rerio]
Length = 223
Score = 38.5 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D + + G + K+ + I +GS+AD + +
Sbjct: 23 GTTIMAVEFDGGVVMGADSRTTTGAYIANRVTDKLTPI-HDRIFCCRSGSAADTQAIADA 81
Query: 75 LEKKLEQYPNQLLRSS-VELAKDWRMD---KYLRNLEAMILIA 113
+ +L + +L + V+ A D +Y L A I++A
Sbjct: 82 VTYQLGFHSIELDEAPLVQTAASLFRDMCYRYREELMAGIIVA 124
>gi|242001650|ref|XP_002435468.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
gi|215498804|gb|EEC08298.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
Length = 279
Score = 38.5 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 2 VVMGDKHYAVKMH---ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
++ D +K+H TT L + G VV+A D + + G+ + + +K+ + K ++
Sbjct: 57 LMKDDSGKQIKIHYDKGTTTLCFKYKGGVVVAADSRATGGEYIGSQSVKKIIVINKY-LL 115
Query: 59 AGFAGSSADAF 69
AG +AD
Sbjct: 116 GTMAGGAADCV 126
>gi|291226132|ref|XP_002733045.1| PREDICTED: proteasome beta 7 subunit-like [Saccoglossus
kowalevskii]
Length = 271
Score = 38.5 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + VV+ D + + V N K+ + G AG++AD +
Sbjct: 38 GTTIVGIVFKDGVVLGADTRATEDTIVADKNCSKIHYIAPNIYCCG-AGTAADTEMTTQM 96
Query: 75 LEKKLEQYP---NQLLRSSV 91
+ +LE + + R V
Sbjct: 97 ISSQLELHRLSTGRTARVCV 116
>gi|170291023|ref|YP_001737839.1| proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
gi|302595829|sp|B1L6S7|PSB1_KORCO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|170175103|gb|ACB08156.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 206
Score = 38.5 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 19/173 (10%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ M TT + V+ V++A D + + G V +A K ++ + A +G AD
Sbjct: 1 MLMKGTTTVGVKFKNGVIVASDKRATSGTFVASKSAVKTLKITDYAV-ATISGLVADGQY 59
Query: 71 LLERLEKKLEQYPNQLLR--SSVELAKDWRMDKYLRN-----LEAMILI--ADKT--ITL 119
L+ + + Y R S +A+ + LR L A +++ D+
Sbjct: 60 LVNNVRTIADLYSLDTERPLSVRGIARI--LAFLLRRYRPYFLLAQLIVGGVDREGAHLF 117
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
+ G + E +A GSG A+S + S A + +M+ A
Sbjct: 118 NVDPFGTLTE--EDYLATGSGSPVAISVIESGYSPDMDRESALRLVISSMTAA 168
>gi|225563200|gb|EEH11479.1| proteasome component [Ajellomyces capsulatus G186AR]
gi|325093149|gb|EGC46459.1| proteasome component [Ajellomyces capsulatus H88]
Length = 276
Score = 38.5 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYITP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 88 ISSNLELH 95
>gi|240275780|gb|EER39293.1| proteasome component [Ajellomyces capsulatus H143]
Length = 276
Score = 38.5 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYITP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 88 ISSNLELH 95
>gi|154281653|ref|XP_001541639.1| proteasome component Pup1 [Ajellomyces capsulatus NAm1]
gi|150411818|gb|EDN07206.1| proteasome component Pup1 [Ajellomyces capsulatus NAm1]
Length = 276
Score = 38.5 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYITP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 88 ISSNLELH 95
>gi|307353377|ref|YP_003894428.1| proteasome endopeptidase complex subunit beta [Methanoplanus
petrolearius DSM 11571]
gi|307156610|gb|ADN35990.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
petrolearius DSM 11571]
Length = 209
Score = 38.5 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 60/143 (41%), Gaps = 15/143 (10%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TT + + DG V++A + + ++G + A+KV ++ I AG DA L
Sbjct: 12 LKGTTTVGLVFDGGVILATERRATMGNMIASKKAKKVYQIA-DRIGMTTAGGVGDAQQLA 70
Query: 73 ERLEKKLEQYPNQLLR--------SSVELAKDWRMDKYLRNLEAMILI---ADKTITLVI 121
++ + Y + R S+ L+ ++ + +++ + +
Sbjct: 71 RWVQVECSLY--NIRRGREMSVGASASLLSNILNNNRMMPYYVQLLVGGVDSGGPSIYSV 128
Query: 122 TGMGDVLEPENGVMAIGSGGSYA 144
+G PE+ ++A GSG +A
Sbjct: 129 DALGGA-SPEDDIVATGSGSPFA 150
>gi|124359794|gb|ABN06120.1| Peptidase T1A, proteasome beta-subunit [Medicago truncatula]
Length = 271
Score = 38.5 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + +++ D + + G V N K+ + G AG++AD + +
Sbjct: 38 GTTIVGLVFQDGIILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 96
Query: 75 LEKKLEQYPNQLLR 88
+ +L+ + R
Sbjct: 97 VSSQLQLHRYHTGR 110
>gi|328849031|gb|EGF98220.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
Length = 296
Score = 38.5 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R +V+A D + + G + +KV + ++ AG +AD
Sbjct: 76 HGTTTLAFRFKHGIVVAVDSRATAGSYIASGTVKKVIEINP-FLLGTMAGGAADC 129
>gi|302688009|ref|XP_003033684.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune
H4-8]
gi|300107379|gb|EFI98781.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune
H4-8]
Length = 274
Score = 38.5 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
T+L + VIAGD + S G + A KV RL ++A GFA AD T +
Sbjct: 22 GGTVLAIAGSDFSVIAGDTRQSEGYNIQTRYAPKVHRLTNKAVLAVTGFA---ADGNTFV 78
Query: 73 ERLEKKLEQYP 83
++L+++LE Y
Sbjct: 79 KKLKQRLEWYH 89
>gi|68069847|ref|XP_676835.1| 20S proteasome beta subunit [Plasmodium berghei strain ANKA]
gi|56496705|emb|CAH96419.1| 20S proteasome beta subunit, putative [Plasmodium berghei]
Length = 269
Score = 38.5 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ H TT L + +++A D + S+G + N K+ + K I+ AG
Sbjct: 47 TENKKLFDFHKGTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIEINKY-ILGTMAG 105
Query: 64 SSADAFTLLERLEKKLEQY 82
+AD F + L + ++ Y
Sbjct: 106 GAADCFYWEKYLGQIIKIY 124
>gi|82752963|ref|XP_727486.1| proteosome PSMB5/8 protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23483352|gb|EAA19051.1| proteosome PSMB5/8 protein [Plasmodium yoelii yoelii]
Length = 287
Score = 38.5 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ H TT L + +++A D + S+G + N K+ + K I+ AG
Sbjct: 48 TENKKLFDFHKGTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIEINKY-ILGTMAG 106
Query: 64 SSADAFTLLERLEKKLEQY 82
+AD F + L + ++ Y
Sbjct: 107 GAADCFYWEKYLGQIIKIY 125
>gi|326519234|dbj|BAJ96616.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 246
Score = 38.5 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+A D + S G V + K+ +L N+ +GS+AD + +
Sbjct: 25 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKISQL-TDNVYVCRSGSAADTQIISDY 83
Query: 75 LEKKLEQYPNQL-LRSSVELAKDW-RMDKYLRN--LEAMILIA--DK---TITLVITGMG 125
+ L Q+ QL ++V++A + R+ Y L+A +++ DK + G
Sbjct: 84 VRYFLHQHTIQLGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVPLGG 143
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK------AMSIAAD 171
+L GSG SY + EE A K +++IA D
Sbjct: 144 TILR--QPFAIGGSGSSYLYGLMDHEWKEGMTQEE-AEKFVVKVVSLAIARD 192
>gi|45360639|ref|NP_988993.1| proteasome beta 1 subunit [Xenopus (Silurana) tropicalis]
gi|38174388|gb|AAH61284.1| proteasome (prosome, macropain) subunit, beta type, 1 [Xenopus
(Silurana) tropicalis]
gi|89272031|emb|CAJ83174.1| proteasome (prosome macropain) subunit beta type 1 [Xenopus
(Silurana) tropicalis]
Length = 239
Score = 38.5 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T+L + D ++A D ++S G ++ N K +L +I G G AD
Sbjct: 29 NPYTFNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDNTVI-GCTGFHADC 87
Query: 69 FTLLERLEKKLEQYP 83
TL + +E +L+ Y
Sbjct: 88 LTLTKIIEARLKMYK 102
>gi|330914585|ref|XP_003296699.1| hypothetical protein PTT_06865 [Pyrenophora teres f. teres 0-1]
gi|311331040|gb|EFQ95206.1| hypothetical protein PTT_06865 [Pyrenophora teres f. teres 0-1]
Length = 260
Score = 38.5 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T++L + VVIA D S G + +++R+ ++ GF G +D
Sbjct: 40 GTSVLAAKFKDGVVIAADNLASYGSLARFTDVKRLRK-FNDEVVVGFGGDVSD 91
>gi|217074222|gb|ACJ85471.1| unknown [Medicago truncatula]
Length = 271
Score = 38.5 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + +++ D + + G V N K+ + G AG++AD + +
Sbjct: 38 GTTIVGLVFQDGIILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 96
Query: 75 LEKKLEQYPNQLLR 88
+ +L+ + R
Sbjct: 97 VSSQLQLHRYHTGR 110
>gi|326495934|dbj|BAJ90589.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 38.5 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+A D + S G V + K+ +L N+ +GS+AD + +
Sbjct: 23 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKISQL-TDNVYVCRSGSAADTQIISDY 81
Query: 75 LEKKLEQYPNQL-LRSSVELAKDW-RMDKYLRN--LEAMILIA--DK---TITLVITGMG 125
+ L Q+ QL ++V++A + R+ Y L+A +++ DK + G
Sbjct: 82 VRYFLHQHTIQLGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVPLGG 141
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK------AMSIAAD 171
+L GSG SY + EE A K +++IA D
Sbjct: 142 TILR--QPFAIGGSGSSYLYGLMDHEWKEGMTQEE-AEKFVVKVVSLAIARD 190
>gi|305664308|ref|YP_003860596.1| proteasome endopeptidase complex, beta subunit [Ignisphaera
aggregans DSM 17230]
gi|304378877|gb|ADM28716.1| proteasome endopeptidase complex, beta subunit [Ignisphaera
aggregans DSM 17230]
Length = 200
Score = 38.5 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 25/188 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE- 73
T + ++ + VV+A + ++S G ++ +KV R+ +IA AG AD +L
Sbjct: 9 GATAVGIKVNDGVVVAAEKRISYGGYIVSRAGKKVFRIADHMVIAA-AGLFADMQSLSRI 67
Query: 74 -----RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-EAMILIADKT--ITLVITGMG 125
+ L ++ ++ L+ K + L E + D+ V+ +G
Sbjct: 68 ISAEIMYRELLSSSKMRVRAAAKLLSAILYSYKLMPFLSEIIFAGFDEEGYHLYVLDPVG 127
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA----------ADI 172
++E + AIG+G S A+ + + A E+A K++ A DI
Sbjct: 128 SIIE--DDYAAIGTGASIAIGVIESEYKNTLTIDQATELAIKSVKAAISRDAVSGDGIDI 185
Query: 173 CVYTNHNI 180
V TN+ I
Sbjct: 186 AVVTNNGI 193
>gi|294953043|ref|XP_002787566.1| proteasome subunit beta type 5-A precursor, putative [Perkinsus
marinus ATCC 50983]
gi|239902590|gb|EER19362.1| proteasome subunit beta type 5-A precursor, putative [Perkinsus
marinus ATCC 50983]
Length = 276
Score = 38.5 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
TT L DG V+IA D + S+G V RKV + +I AG +AD
Sbjct: 61 KGTTTLGFVFDGGVLIAVDSRASMGSYVSSQTVRKVLHI-TDRLIGTMAGGAADC 114
>gi|114665822|ref|XP_001161912.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit, beta
type, 6 isoform 1 [Pan troglodytes]
Length = 213
Score = 38.5 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG VV+ D + + G + K+ + I +GS+AD + +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADA 92
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 93 VTYQLGFHS 101
>gi|195396599|ref|XP_002056918.1| GJ16628 [Drosophila virilis]
gi|194146685|gb|EDW62404.1| GJ16628 [Drosophila virilis]
Length = 304
Score = 38.5 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + V++ D + + G V N K+ RL G AG++AD +
Sbjct: 44 GTSIVGIVYQNGVILGADTRATEGPIVSDKNCSKIHRLQDHIFCCG-AGTAADTEQMTLM 102
Query: 75 LEKKLEQYPNQLLR 88
+L+ + R
Sbjct: 103 TSAELDLHGLNTDR 116
>gi|1405321|dbj|BAA10931.1| LMPX of hagfish [Myxine glutinosa]
Length = 273
Score = 38.5 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
G+ ++ H TT L + D V++A D + + G V +KV + ++ AG
Sbjct: 59 GESDVKIEFHHGTTTLAFKFDHGVIVAVDSRATAGSYVASQTVKKVIEINPY-LLGTMAG 117
Query: 64 SSADAF 69
+AD
Sbjct: 118 GAADCM 123
>gi|219114096|ref|XP_002176225.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402809|gb|EEC42786.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 248
Score = 38.5 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 36/183 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T++L + DG V++A D +S G NAR++ + + G +G +D + +
Sbjct: 19 GTSVLGIVYDGGVLLAADTLLSYGSMAKDQNARRLHVIPGTFTMIGASGEYSDFQKVCQI 78
Query: 75 LEKK-LEQYPNQLLRS-------SVELAKDWRMDKYLRNLEAMILIADKTIT------LV 120
LE+K LE+ L+ S S+ A W YLR M++ A + ++
Sbjct: 79 LEEKALEETHTSLMDSLYADTSQSITAASTW---NYLR----MVMYARRNKMNPFWNDIL 131
Query: 121 ITGMGDVLEP------------ENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKA 165
+ G +P ++ +A G G AL R S A +
Sbjct: 132 VAGTDRQGKPFLGMVDKIGTTVQDNFLATGFGSYLALPIMREKWRPDLSEGEARALLEDC 191
Query: 166 MSI 168
M +
Sbjct: 192 MKV 194
>gi|320581894|gb|EFW96113.1| Beta 5 subunit of the 20S proteasome [Pichia angusta DL-1]
Length = 284
Score = 38.5 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ +KM H TT L R G +++A D + + G + +KV + ++ AG
Sbjct: 61 SNPDCKIKMAHGTTTLAFRFQGGIIVAVDSRATAGNWIASQTVKKVIEINP-MLLGTMAG 119
Query: 64 SSADA 68
++ D
Sbjct: 120 TACDC 124
>gi|66271071|gb|AAY43812.1| beta1 proteasome-1D [Aegilops tauschii]
Length = 244
Score = 38.5 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+A D + S G V + K+ +L N+ +GS+AD + +
Sbjct: 23 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKISQL-TDNVYVCRSGSAADTQVISDY 81
Query: 75 LEKKLEQYPNQL-LRSSVELAKDW-RMDKYLRN--LEAMILIA--DK---TITLVITGMG 125
+ L Q+ QL ++V++A + R+ Y L+A +++ DK + G
Sbjct: 82 VRYFLHQHTIQLGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVPLGG 141
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK------AMSIAAD 171
+L GSG SY + EE A K +++IA D
Sbjct: 142 TILR--QPFAIGGSGSSYLYGLMDHEWKEGMTQEE-AEKFVVKVVSLAIARD 190
>gi|242094606|ref|XP_002437793.1| hypothetical protein SORBIDRAFT_10g002700 [Sorghum bicolor]
gi|241916016|gb|EER89160.1| hypothetical protein SORBIDRAFT_10g002700 [Sorghum bicolor]
Length = 245
Score = 38.5 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG V++ D + S G V + K+ +L N+ +GS+AD + +
Sbjct: 24 GTTIVGVCYDGGVILGADSRTSTGMYVANRASDKITQL-TDNVYVCRSGSAADTQVISDY 82
Query: 75 LEKKLEQYPNQL-LRSSVELAKDW-RMDKYLRN--LEAMILIA--DK---TITLVITGMG 125
+ L Q+ QL ++V++A + R+ Y L+A +++ DK + G
Sbjct: 83 VRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGG 142
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK------AMSIAAD 171
+L + GSG SY + S EE A K ++++A D
Sbjct: 143 TIL--KQPFAIGGSGSSYLYALLDHEWKEGMSQEE-AEKFVVKVVSLAMARD 191
>gi|115960031|ref|XP_001184237.1| PREDICTED: similar to proteasome subunit beta type 6,9
[Strongylocentrotus purpuratus]
Length = 100
Score = 38.5 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + + G V K+ ++ I +GS+AD + +
Sbjct: 33 GTTIMAVEFDGGVVIGADSRTTTGSYVANRVTDKLTKVC-DRIYCCRSGSAADTQAIADI 91
Query: 75 LEKKLEQYP 83
+ LE +
Sbjct: 92 VSYLLEFHR 100
>gi|289192182|ref|YP_003458123.1| proteasome endopeptidase complex, beta subunit
[Methanocaldococcus sp. FS406-22]
gi|302595757|sp|D3S8M7|PSB_METSF RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|288938632|gb|ADC69387.1| proteasome endopeptidase complex, beta subunit
[Methanocaldococcus sp. FS406-22]
Length = 224
Score = 38.5 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M TT + + D V++A D + SLG V A+K+ ++ I AGS DA ++
Sbjct: 4 MKGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKI-DDYIAMTIAGSVGDAQAIV 62
Query: 73 ERL--EKKL 79
L E KL
Sbjct: 63 RLLTAEAKL 71
>gi|39945094|ref|XP_362084.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
gi|145021494|gb|EDK05623.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
Length = 271
Score = 38.5 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ +G VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFEGGVVIAADTRATSGPIVADKNCEKLHYISP-QIWCAGAGTAADTEFTTAI 87
Query: 75 LEKKLEQYP 83
+ +LE +
Sbjct: 88 ISSQLELHS 96
>gi|145350076|ref|XP_001419449.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579680|gb|ABO97742.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 227
Score = 38.5 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 29/192 (15%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+L V + V+ A D ++S G +++ N KV ++ ++A AG ADA TL +
Sbjct: 19 GGTVLAVAGENYVICASDTRMSTGYSILTRNYEKVDQMSPKTLMAS-AGFMADAQTLKKT 77
Query: 75 LEKKLEQYPNQLLR--SSVELAKDWRMDKYLRNL---EAMILIA--DKT----------- 116
L+ + +QY Q + V A+ Y R A ++A D
Sbjct: 78 LKARCKQYEFQNKKPIGCVSFAQMLSNTLYYRRFFPYYAFNIVAGLDAEGKGAVFTYDAV 137
Query: 117 -----ITLVITGMGD-VLEP--ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
G G ++ P +N + + A+S+A L ++ +A E+ + +
Sbjct: 138 GSYERTNYSCQGSGQALIMPVLDNQLKTVSPLVLPAVSSATPL--SEAAAIELIKDCFAT 195
Query: 169 AADICVYTNHNI 180
AA+ +YT +
Sbjct: 196 AAERDIYTGDRV 207
>gi|70989545|ref|XP_749622.1| proteasome component Pup1 [Aspergillus fumigatus Af293]
gi|66847253|gb|EAL87584.1| proteasome component Pup1, putative [Aspergillus fumigatus Af293]
Length = 272
Score = 38.1 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ D VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDNGVVIAADTRATSGPIVADKNCEKLHYIAP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP 83
+ +E +
Sbjct: 88 ISSNIELHS 96
>gi|189193573|ref|XP_001933125.1| proteasome component PRE4 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978689|gb|EDU45315.1| proteasome component PRE4 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 260
Score = 38.1 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T++L + VVIA D S G + +++R+ ++ GF G +D
Sbjct: 40 GTSVLAAKFKDGVVIAADNLASYGSLARFTDVKRLRK-FNDEVVVGFGGDVSD 91
>gi|156030953|ref|XP_001584802.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154700648|gb|EDO00387.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 274
Score = 38.1 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ +G VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFEGGVVIAADTRATSGPIVADKNCEKLHYIAP-QIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP 83
+ +LE +
Sbjct: 88 ISSQLELHS 96
>gi|154297630|ref|XP_001549241.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|150858483|gb|EDN33675.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 274
Score = 38.1 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ +G VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFEGGVVIAADTRATSGPIVADKNCEKLHYIAP-QIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP 83
+ +LE +
Sbjct: 88 ISSQLELHS 96
>gi|325184015|emb|CCA18472.1| proteasome subunit beta putative [Albugo laibachii Nc14]
Length = 247
Score = 38.1 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 32/202 (15%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T L + VVIAGD ++S G +++ N +K+++L +++A GS D
Sbjct: 38 EPYDFNGGTALAIAGPDYVVIAGDSRLSTGYSILSRNEKKLQQLTSTSVLAS-PGSHNDV 96
Query: 69 FTLLERLEKKLE--QYPNQLLRSSVELAKDWRMDKYLRNL---EAMILIA--DKTITLVI 121
L L+ +++ + NQ + S+ L++ Y R A ++A DK
Sbjct: 97 IQLRGMLQLQIQMYMHDNQAIISTENLSQVLMNTLYSRRFFPYYAFCVLAGIDKD----- 151
Query: 122 TGMG-----DVLEPENGVM--AIGSGGSYALSAARALMS-----------TQNSAEEIAR 163
G G D + + V A+GSGG + L+ TQ +EI +
Sbjct: 152 -GKGAVYSYDAIGSYDRVSRGAVGSGGHLMIPLLDNLVEHYSRTDPKREFTQQETKEIIK 210
Query: 164 KAMSIAADICVYTNHNIVLETL 185
A A + +YT + + T+
Sbjct: 211 DAFITAGERDIYTGDCVEIMTI 232
>gi|226372034|gb|ACO51642.1| Proteasome subunit beta type-7 precursor [Rana catesbeiana]
Length = 277
Score = 38.1 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + V++ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGIVFKDGVILGADTRATEGMVVADKNCSKIHYIASNVYCCG-AGTAADTEMTTQM 101
Query: 75 LEKKLEQYP---NQLLRSS 90
+ +E + +L R +
Sbjct: 102 ISSNVELHSLSTGRLPRVA 120
>gi|217072416|gb|ACJ84568.1| unknown [Medicago truncatula]
Length = 271
Score = 38.1 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + +++ D + + G V N K+ + G AG++AD + +
Sbjct: 38 GTTIVGLVFQDGIILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 96
Query: 75 LEKKLEQYPNQLLR 88
+ +L+ + R
Sbjct: 97 VSSQLQLHRYHTGR 110
>gi|195029659|ref|XP_001987689.1| GH19825 [Drosophila grimshawi]
gi|193903689|gb|EDW02556.1| GH19825 [Drosophila grimshawi]
Length = 222
Score = 38.1 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G V K+ ++ I +GS+AD + +
Sbjct: 15 GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTQIS-DKIYCCRSGSAADTQAIADI 73
Query: 75 LEKKLEQYPNQLLR 88
+ L + NQ +
Sbjct: 74 VAYSLNYHRNQTSK 87
>gi|67523257|ref|XP_659689.1| hypothetical protein AN2085.2 [Aspergillus nidulans FGSC A4]
gi|40745761|gb|EAA64917.1| hypothetical protein AN2085.2 [Aspergillus nidulans FGSC A4]
gi|259487455|tpe|CBF86148.1| TPA: proteasome component Pup1, putative (AFU_orthologue;
AFUA_2G04910) [Aspergillus nidulans FGSC A4]
Length = 272
Score = 38.1 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ D VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDNGVVIAADTRATSGPIVADKNCEKLHYIAP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP 83
+ +E +
Sbjct: 88 ISSNIELHS 96
>gi|299116145|emb|CBN76052.1| proteasome beta subunit [Ectocarpus siliculosus]
Length = 249
Score = 38.1 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T++ V +IA D ++S G T++ N +V RL +A AG AD LL
Sbjct: 35 GGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLAT-AGCWADTQGLLRL 93
Query: 75 LEKKLEQY 82
LE + Y
Sbjct: 94 LEYLIRDY 101
>gi|225704850|gb|ACO08271.1| Proteasome subunit beta type 6 precursor [Oncorhynchus mykiss]
Length = 212
Score = 38.1 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 20/170 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
TTIL V +G V+I D + S+G + +++ + +L I AGS ADA +
Sbjct: 11 GTTILAVTFNGGVIIGSDSRASIGGYYV--SSKTINKLIQVHDRIFCCIAGSLADAQAAI 68
Query: 73 ERLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVIT 122
+ + ++ + Q L++++ + K+ + L+A + A D+ +
Sbjct: 69 KAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTVA 127
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G +L GSG +Y A A S EE A A+++A
Sbjct: 128 LGGMLL--SQPFTIGGSGSTYIYGYADAKYKPDMSREECLQFATNALALA 175
>gi|195629028|gb|ACG36246.1| proteasome subunit beta type 6 precursor [Zea mays]
Length = 243
Score = 38.1 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L N+ +GS+AD + +
Sbjct: 22 GTTIVGVCYEGGVVLGADSRTSTGMYVANRASDKITQL-TDNVYVCRSGSAADTQVISDY 80
Query: 75 LEKKLEQYPNQL-LRSSVELAKDW-RMDKYLRN--LEAMILIA--DK---TITLVITGMG 125
+ L Q+ QL ++V++A + R+ Y L+A +++ DK + G
Sbjct: 81 IRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGG 140
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK------AMSIAAD 171
+L + GSG SY + S EE A K ++++A D
Sbjct: 141 TIL--KQPFAIGGSGSSYLYALLDHEWKEGMSQEE-AEKFVVKVVSLAMARD 189
>gi|195130036|ref|XP_002009460.1| GI15360 [Drosophila mojavensis]
gi|193907910|gb|EDW06777.1| GI15360 [Drosophila mojavensis]
Length = 313
Score = 38.1 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 76/199 (38%), Gaps = 35/199 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + V++ D + + G V N K+ RL G AG++AD +
Sbjct: 44 GTSIVGIIYQDGVILGADTRATEGPIVSDKNCSKIHRLQDHIYCCG-AGTAADTEQMTLM 102
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG------DVL 128
+L+ + R + + + L + I A LV+ G+ + +
Sbjct: 103 TSAELDLHGLNTGRQVPLICASMMLRRTLFRYQGHISAA-----LVMGGVDKYGPHINCI 157
Query: 129 EPENGV-----MAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAA---------- 170
P + A+GSG A++ + + +++ RKA+S A
Sbjct: 158 HPCGSIDKIPYAAMGSGTLAAMAVLEQGWNPELGLEDGKQLVRKAIS-AGVFNDLGSGSN 216
Query: 171 -DICVYTNH---NIVLETL 185
D+CV T ++ ET+
Sbjct: 217 IDLCVITRDGAKHLRTETI 235
>gi|212543353|ref|XP_002151831.1| proteasome component Pre4, putative [Penicillium marneffei ATCC
18224]
gi|210066738|gb|EEA20831.1| proteasome component Pre4, putative [Penicillium marneffei ATCC
18224]
Length = 260
Score = 38.1 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T+++ V+ +G V +A D S G + ++R + I GF G +D
Sbjct: 40 GTSVVAVKFNGGVAMATDNLASYGSLARFTDVNRIRT-FDDSAIVGFGGDVSD 91
>gi|194701304|gb|ACF84736.1| unknown [Zea mays]
gi|194701404|gb|ACF84786.1| unknown [Zea mays]
Length = 244
Score = 38.1 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L N+ +GS+AD + +
Sbjct: 23 GTTIVGVCYEGGVVLGADSRTSTGMYVANRASDKITQL-TDNVYVCRSGSAADTQVISDY 81
Query: 75 LEKKLEQYPNQL-LRSSVELAKDW-RMDKYLRN--LEAMILIA--DK---TITLVITGMG 125
+ L Q+ QL ++V++A + R+ Y L+A +++ DK + G
Sbjct: 82 VRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGG 141
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK------AMSIAAD 171
+L + GSG SY + S EE A K ++++A D
Sbjct: 142 TIL--KQPFAIGGSGSSYLYALLDHEWKEGMSQEE-AEKFVVKVVSLAMARD 190
>gi|320164621|gb|EFW41520.1| proteasome subunit beta type-6 [Capsaspora owczarzaki ATCC 30864]
Length = 223
Score = 38.1 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D + M T+I+ V +G VVI D + + G + K+ R+ I +GS+
Sbjct: 14 DWLSSEHMTGTSIMAVEFNGGVVIGADSRTTTGSYIANRVTDKLTRI-TDRIYCCRSGSA 72
Query: 66 ADAFTLLERLEKKLEQYP 83
AD + + ++ L+ +
Sbjct: 73 ADTQAIADYVKYYLDLHS 90
>gi|159474370|ref|XP_001695298.1| 20S proteasome beta subunit A1 [Chlamydomonas reinhardtii]
gi|158275781|gb|EDP01556.1| 20S proteasome beta subunit A1 [Chlamydomonas reinhardtii]
Length = 212
Score = 38.1 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 23/171 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G V++A D + S G + K+ L N+ +GS+AD +
Sbjct: 2 GTTIIAVTFNGGVILAADSRTSTGNYIANRVTDKITPLC-DNVYTLRSGSAADTQAIAGY 60
Query: 75 LEKKLEQYPN------QLLRSS--VELAKDWRMDKYLRNLEAMILIA--DKT---ITLVI 121
++ + Q+ + ++ V++ D NL+A +++A DK I
Sbjct: 61 VQHFIAQHQAEEGEHINVKTAANLVKMMAYNNKD----NLQAGLIVAGYDKHGGGQVFSI 116
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
+ G + E GSG +Y S A + KA+ A
Sbjct: 117 SLGGTITE--TSFAMSGSGSTYINGFVDKYWREGMSEQEAMDFVTKALRYA 165
>gi|242079721|ref|XP_002444629.1| hypothetical protein SORBIDRAFT_07g025030 [Sorghum bicolor]
gi|241940979|gb|EES14124.1| hypothetical protein SORBIDRAFT_07g025030 [Sorghum bicolor]
Length = 245
Score = 38.1 bits (88), Expect = 0.60, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG V++ D + S G V + K+ +L N+ +GS+AD + +
Sbjct: 24 GTTIVGVCYDGGVILGADSRTSTGMYVANRASDKITQL-TDNVYVCRSGSAADTQVISDY 82
Query: 75 LEKKLEQYPNQL-LRSSVELAKDW-RMDKYLRN--LEAMILIA--DK---TITLVITGMG 125
+ L Q+ QL ++V++A + R+ Y L+A +++ DK + G
Sbjct: 83 VRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGG 142
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK------AMSIAAD 171
+L + GSG SY + S EE A K ++++A D
Sbjct: 143 TIL--KQPFAIGGSGSSYLYALLDHEWKEGMSQEE-AEKFVVKVVSLAMARD 191
>gi|189200881|ref|XP_001936777.1| proteasome subunit beta type-9 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983876|gb|EDU49364.1| proteasome subunit beta type-9 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 254
Score = 38.1 bits (88), Expect = 0.60, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCLFDGGVVIAADTRATSGPIVADKNCEKLHYIAP-QIWCAGAGTAADTEFTTAI 87
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 88 ISSNLELH 95
>gi|145243882|ref|XP_001394453.1| proteasome component PUP1 [Aspergillus niger CBS 513.88]
gi|134079136|emb|CAK45948.1| unnamed protein product [Aspergillus niger]
Length = 272
Score = 38.1 bits (88), Expect = 0.61, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ D VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIYDNGVVIAADTRATSGPIVADKNCEKLHYIAP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQY 82
+ +E +
Sbjct: 88 ISSNIELH 95
>gi|72049590|ref|XP_780745.1| PREDICTED: similar to proteasome subunit beta type 6,9, partial
[Strongylocentrotus purpuratus]
Length = 99
Score = 38.1 bits (88), Expect = 0.61, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + + G V K+ ++ I +GS+AD + +
Sbjct: 33 GTTIMAVEFDGGVVIGADSRTTTGSYVANRVTDKLTKVC-DRIYCCRSGSAADTQAIADI 91
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 92 VSYLLEFH 99
>gi|242011050|ref|XP_002426270.1| proteasome subunit beta type 5 precursor, putative [Pediculus
humanus corporis]
gi|212510333|gb|EEB13532.1| proteasome subunit beta type 5 precursor, putative [Pediculus
humanus corporis]
Length = 271
Score = 38.1 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
H TT L R V++A D + + GQ + +K+ + ++ AG +AD
Sbjct: 62 HGTTTLGFRFKNGVILAVDSRATGGQCIGSQTMKKIVEI-NNYLLGTLAGGAADCV 116
>gi|308321337|gb|ADO27820.1| proteasome subunit beta type-7 [Ictalurus furcatus]
Length = 295
Score = 38.1 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 63/178 (35%), Gaps = 34/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V V++ D + + V N K+ + G AG++AD +
Sbjct: 61 GTTICGVVYKDGVILGADTRATEEMVVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQL 119
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNL--------EAMILI----ADKTITL 119
+ LE + N+L R + ++ L+ + A +++ +
Sbjct: 120 ISSNLELHSLSTNRLPRVATA-------NRMLKQMLFRYQGYIGAALVLGGVDCNGPHLY 172
Query: 120 VI--TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
I G D L + +GSG A++ EE + R A IAA I
Sbjct: 173 SIYPHGSTDKL----PYVTMGSGSLAAMAVFEDRYRPDLEEEEAKLLVRDA--IAAGI 224
>gi|254580841|ref|XP_002496406.1| ZYRO0C17688p [Zygosaccharomyces rouxii]
gi|238939297|emb|CAR27473.1| ZYRO0C17688p [Zygosaccharomyces rouxii]
Length = 287
Score = 38.1 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R G +++A D + S G V +KV + ++ AG +AD
Sbjct: 74 HGTTTLAFRFQGGIIVAVDSRASAGSWVASQTVKKVIEINP-FLLGTMAGGAADC 127
>gi|145499554|ref|XP_001435762.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402897|emb|CAK68365.1| unnamed protein product [Paramecium tetraurelia]
Length = 214
Score = 38.1 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 12/146 (8%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+ + TTI+ V DG ++I D + S GQ V A K+ + I +G++A
Sbjct: 9 SKFEPETTGTTIMAVIYDGGLLIGADSRTSSGQFVADRCADKIDYI-HDRIFCLRSGAAA 67
Query: 67 DAFTLLERLEKKLEQYPNQLLR--SSVELAKDWRMDKYLRN--LEAMILIADKT-----I 117
D + + + ++ + +L R + A +R Y + A I++A
Sbjct: 68 DTQIITKHVRYYVDAHAQELGRLPAVATAANLFRNFLYEYKDSMSASIIVAGWDPYKGPQ 127
Query: 118 TLVITGMGDVLEPENGVMAIGSGGSY 143
+ G V+E + + GSG ++
Sbjct: 128 IFTLPLGGSVIEQKWSI--GGSGSTF 151
>gi|195121614|ref|XP_002005315.1| GI20414 [Drosophila mojavensis]
gi|193910383|gb|EDW09250.1| GI20414 [Drosophila mojavensis]
Length = 222
Score = 38.1 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G V K+ ++ I +GS+AD + +
Sbjct: 15 GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTQIS-DKIYCCRSGSAADTQAIADI 73
Query: 75 LEKKLEQYPNQ 85
+ L + NQ
Sbjct: 74 VAYSLNYHRNQ 84
>gi|325181392|emb|CCA15808.1| proteasome subunit beta type6 putative [Albugo laibachii Nc14]
Length = 216
Score = 38.1 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 60/160 (37%), Gaps = 22/160 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V+ DG VV+ D + S G V + K+ L I +GS+AD L +
Sbjct: 18 GTSIIAVKFDGGVVLGADSRTSTGAYVANRVSDKLTGL-HDRIYCCRSGSAADTQALSDY 76
Query: 75 LEKKLEQYP---NQLLRSSVELAKDWR------MDKYLRNLEAMILIADKT-----ITLV 120
+ L + +L + A +R D+ L A I++A
Sbjct: 77 VRYFLSSHSLDVGKLPK-VHTAANLFRSLCYNNKDRLL----AGIIVAGWDPVHGGQVYS 131
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
I G ++ + GSG +Y A + EE
Sbjct: 132 IPIGGAMV--KQNFAIGGSGSTYIYGLVDAAYRPDMTQEE 169
>gi|296415988|ref|XP_002837664.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633544|emb|CAZ81855.1| unnamed protein product [Tuber melanosporum]
Length = 260
Score = 38.1 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
M ++H + T+++ ++ +G VVIA D S G N +++++G ++ G
Sbjct: 28 MPNQHTQSPIVTGTSVVALKFNGGVVIAADNLASYGSLARFTNVERLKQVGTHTVV-GAG 86
Query: 63 GSSADAFTLLERLEKKL---EQYP--NQLLRSS 90
G +D L E+L L E+Y LR+S
Sbjct: 87 GDISDMQYLHEKLLDSLIIKEEYQNDGHHLRAS 119
>gi|198438343|ref|XP_002132107.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
type, 5 [Ciona intestinalis]
Length = 270
Score = 38.1 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 6 DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
D +K H TT L + VV+A D + + G + +KV + ++ AG
Sbjct: 56 DSDVHIKFNHGTTTLAFKFQHGVVVATDSRATAGDYIASQTVKKVIEINPY-LLGTMAGG 114
Query: 65 SADA 68
+AD
Sbjct: 115 AADC 118
>gi|195156629|ref|XP_002019199.1| GL26231 [Drosophila persimilis]
gi|194115352|gb|EDW37395.1| GL26231 [Drosophila persimilis]
Length = 238
Score = 38.1 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 23/171 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VV+ D + + G V KV R+ N+ +GS+AD L E
Sbjct: 21 GTTIMAAEFDGGVVLGADSRTTAGGHVANRITDKVTRI-TDNVYCCRSGSAADTQELSEV 79
Query: 75 LEKKL---EQYPNQ--LLRSSVELAKDWRMDKYL--RN-LEAMILIADKTIT-----LVI 121
+ + E + + L+R ++A ++R DK R L A I++ I
Sbjct: 80 VSNLMWHREMHTGEKTLVR---DVAAEFR-DKCYNGRKYLYAGIIVGGWDDLHGAQVYNI 135
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIA 169
G ++ + GSG Y R EE+ R A+ A
Sbjct: 136 ALGGMMMR--EQLSYGGSGSIYISGMLRDGYRPNMEKEELVLLFRSALKQA 184
>gi|169622693|ref|XP_001804755.1| hypothetical protein SNOG_14573 [Phaeosphaeria nodorum SN15]
gi|160704831|gb|EAT78113.2| hypothetical protein SNOG_14573 [Phaeosphaeria nodorum SN15]
Length = 276
Score = 38.1 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + AG AG++AD
Sbjct: 29 GTTIVGCLFDGGVVIAADTRATSGPIVADKNCEKLHYISPHIWCAG-AGTAADTEFTTAI 87
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 88 ISSNLELH 95
>gi|322791530|gb|EFZ15921.1| hypothetical protein SINV_10172 [Solenopsis invicta]
Length = 292
Score = 38.1 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L R G +++A D + + GQ + + +K+ + ++ AG +AD
Sbjct: 80 HGTTTLGFRYQGGIILAVDSRATGGQFIGSSTMKKIVEI-NDYLLGTLAGGAADCVYWDR 138
Query: 74 RLEKKLEQY 82
L ++ Y
Sbjct: 139 VLARQCRMY 147
>gi|302334368|gb|ADL27419.1| proteasome subunit beta type [Pheronema raphanus]
Length = 279
Score = 38.1 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + G V++A D + + G + +KV + ++ AG +AD
Sbjct: 74 HGTTTLAFKYQGGVIVAVDSRATAGSWIASQTCKKVIEINPY-LLGTMAGGAADCSYWER 132
Query: 74 RLEKKLEQY 82
RL ++ Y
Sbjct: 133 RLAQECRLY 141
>gi|328766804|gb|EGF76856.1| hypothetical protein BATDEDRAFT_14510 [Batrachochytrium
dendrobatidis JAM81]
Length = 267
Score = 37.7 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 25/170 (14%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TT L + VV+A D + ++G + +KV + ++ AG +AD
Sbjct: 5 KGTTTLAFKFAKGVVVAVDSRATMGSYIGSQTVKKVIEINPY-LLGTMAGGAADCSFWER 63
Query: 74 RLEKKLEQYP-NQLLRSSVELAKDWRMDKYLRN-----------LEAMILIADKT--ITL 119
L ++ Y R SV A K L N + MI DK
Sbjct: 64 ELGRRARLYELRNKERISVAAAS-----KLLSNMVYGYKGMGLSMGTMITGWDKQGPGLF 118
Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAM 166
+ G L +N + ++GSG +YA A A ++AR+++
Sbjct: 119 YVDSDGQRL--KNHMFSVGSGSTYAYGVLDAGYDYDLSVNDAIDLARRSI 166
>gi|281208762|gb|EFA82937.1| proteasome subunit beta type 5 [Polysphondylium pallidum PN500]
Length = 277
Score = 37.7 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 10 AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
++M H TT L + G V++A D + + G V +KV + ++ AG +AD
Sbjct: 56 PIEMAHGTTTLAFQYAGGVIVAVDSKSTQGSYVASRTVKKVIEITPY-LLGTMAGGAADC 114
>gi|312218053|emb|CBX97999.1| similar to proteasome subunit beta type 7 precursor
[Leptosphaeria maculans]
Length = 276
Score = 37.7 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCLFDGGVVIAADTRATSGPIVADKNCEKLHFISP-QIWCAGAGTAADTEFTTAI 87
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 88 ISSNLELH 95
>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
2661]
gi|2499838|sp|Q58634|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
2661]
Length = 224
Score = 37.7 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 67/179 (37%), Gaps = 40/179 (22%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M TT + + D V++A D + SLG V A+K+ ++ I AGS DA ++
Sbjct: 4 MKGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKI-DDYIAMTIAGSVGDAQAIV 62
Query: 73 ERL--EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT--------LVIT 122
L E KL + R + + L L+++ + +I
Sbjct: 63 RLLIAEAKLYKM---------------RTGRNIPPLACATLLSNILHSSRMFPFLTQIII 107
Query: 123 GMGDVLE--------PENGV------MAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
G D+LE P G+ A GSG A A S EE + A++
Sbjct: 108 GGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALN 166
>gi|195430422|ref|XP_002063254.1| GK21488 [Drosophila willistoni]
gi|194159339|gb|EDW74240.1| GK21488 [Drosophila willistoni]
Length = 225
Score = 37.7 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D + S G V K+ R+ I +GS+AD + +
Sbjct: 14 GTTIMAVEFDGGVVVGADSRTSSGAYVANRVTDKLTRI-TDKIYCCRSGSAADTQAIADI 72
Query: 75 LEKKLEQYPNQLLRSSV--ELAKDWR 98
+ L + Q R + E A ++R
Sbjct: 73 VAYSLNYHEIQTNRDAEVWEAASEFR 98
>gi|119193390|ref|XP_001247301.1| proteasome component [Coccidioides immitis RS]
Length = 277
Score = 37.7 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + AG AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYITPSIWCAG-AGTAADTEFTTAL 87
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 88 ISSNLELH 95
>gi|157135040|ref|XP_001663403.1| proteasome subunit beta type 5,8 [Aedes aegypti]
gi|108870309|gb|EAT34534.1| proteasome subunit beta type 5,8 [Aedes aegypti]
Length = 282
Score = 37.7 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
H TT L R G V++A D + + GQ + +K+ + ++ AG +AD
Sbjct: 72 HGTTTLGFRFQGGVILAVDSRATGGQFIGSQTMKKIVEI-NDYLLGTLAGGAADCV 126
>gi|21465650|pdb|1IRU|I Chain I, Crystal Structure Of The Mammalian 20s Proteasome At
2.75 A Resolution
gi|21465664|pdb|1IRU|W Chain W, Crystal Structure Of The Mammalian 20s Proteasome At
2.75 A Resolution
Length = 234
Score = 37.7 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI V +V+ D + + G V N K+ + G AG++AD + +
Sbjct: 1 TTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQLI 59
Query: 76 EKKLEQYP---NQLLR 88
LE + +L R
Sbjct: 60 SSNLELHSLSTGRLPR 75
>gi|303312105|ref|XP_003066064.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105726|gb|EER23919.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 277
Score = 37.7 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + AG AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYITPSIWCAG-AGTAADTEFTTAL 87
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 88 ISSNLELH 95
>gi|320040045|gb|EFW21979.1| proteasome component [Coccidioides posadasii str. Silveira]
Length = 277
Score = 37.7 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + AG AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYITPSIWCAG-AGTAADTEFTTAL 87
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 88 ISSNLELH 95
>gi|330921364|ref|XP_003299395.1| hypothetical protein PTT_10371 [Pyrenophora teres f. teres 0-1]
gi|311326978|gb|EFQ92531.1| hypothetical protein PTT_10371 [Pyrenophora teres f. teres 0-1]
Length = 276
Score = 37.7 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCLFDGGVVIAADTRATSGPIVADKNCEKLHYIAP-QIWCAGAGTAADTEFTTAI 87
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 88 ISSNLELH 95
>gi|225703584|gb|ACO07638.1| Proteasome subunit beta type 7 precursor [Oncorhynchus mykiss]
Length = 277
Score = 37.7 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 42/197 (21%), Positives = 71/197 (36%), Gaps = 31/197 (15%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
G M TTI V VV+ D + + G+ V K+ + G AG
Sbjct: 32 GQTKAPKPMKTGTTIAGVLCKNGVVLGADTRATSGEVVADKMCAKIHYISPNIYCCG-AG 90
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----AD 114
++AD + L L + R+ +V + +D + +Y + A +++
Sbjct: 91 TAADTEKTTDLLSSNLTIFSMNSGRNPRVVMAVNILQD-MLFRYRGQIGASLILGGVDCT 149
Query: 115 KTITLVITGMGDVLEPENGV--MAIGSGGSYALSAARALMSTQN---SAEEIARKAMS-- 167
+ G + + V +A+GSG AL A+E+ R A+
Sbjct: 150 GNHLYKVGPYGSI----DNVPYLAMGSGDLAALGILEDRFKADMEMEEAKELVRDAIHSG 205
Query: 168 IAA--------DICVYT 176
I + DICV T
Sbjct: 206 IMSDLGSGNNIDICVIT 222
>gi|156084624|ref|XP_001609795.1| proteasome A-type and B-type family protein [Babesia bovis]
gi|154797047|gb|EDO06227.1| proteasome A-type and B-type family protein [Babesia bovis]
Length = 217
Score = 37.7 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T++ + VIA D ++S+G + N K+++L + +I G +G AD L
Sbjct: 14 GGTVVAAVWNNCAVIAADTRLSIGYAIHTRNVSKLKKLTQTCVI-GTSGMQADMHALHSA 72
Query: 75 LEKKLEQYP 83
LE+++E Y
Sbjct: 73 LERQIELYR 81
>gi|320582637|gb|EFW96854.1| proteasome component Pre3, putative [Pichia angusta DL-1]
Length = 216
Score = 37.7 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V+ V++ D + + G + K+ ++ I +GS+AD + +
Sbjct: 19 GTSIMAVKFKDGVILGADSRTTTGSYIANRVTDKLTQI-HDKIWCCRSGSAADTQAVADI 77
Query: 75 LEKKLEQYPNQ 85
++ LE Y
Sbjct: 78 VKYHLEMYKAN 88
>gi|119480173|ref|XP_001260115.1| proteasome component Pup1, putative [Neosartorya fischeri NRRL
181]
gi|119408269|gb|EAW18218.1| proteasome component Pup1, putative [Neosartorya fischeri NRRL
181]
Length = 272
Score = 37.7 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ D VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDNGVVIAADTRATSGPIVADKNCEKLHYIAP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP 83
+ +E +
Sbjct: 88 ISSNVELHS 96
>gi|195497244|ref|XP_002096019.1| GE25306 [Drosophila yakuba]
gi|194182120|gb|EDW95731.1| GE25306 [Drosophila yakuba]
Length = 324
Score = 37.7 bits (87), Expect = 0.78, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT++ + DG V+I + + + G + +RKV L + NI A AG + D L+E
Sbjct: 49 GTTLVGIVFDGGVIIGAESRATNGNIIPSKKSRKVCEL-QTNIFASGAGVARDTNALMEL 107
Query: 75 LEKKLEQYPNQ--LLRSSVELAKDWRMDKYLRNL 106
+L + R V A ++ +R L
Sbjct: 108 TRAQLALHRMNTGFRRVPVRCA-----NQMMRQL 136
>gi|170583083|ref|XP_001896421.1| proteasome subunit beta type 3 [Brugia malayi]
gi|158596348|gb|EDP34705.1| proteasome subunit beta type 3, putative [Brugia malayi]
Length = 205
Score = 37.7 bits (87), Expect = 0.78, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ--TVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ TIL + + V IA D + LG+ T + N +KV +LG+ + G G +DA
Sbjct: 4 MSYSGGTILAMAGNDCVCIASD--LRLGEQMTTIATNMKKVHKLGE-KVYIGLGGFHSDA 60
Query: 69 FTLLER 74
T+L++
Sbjct: 61 KTVLDK 66
>gi|170065467|ref|XP_001867951.1| proteasome subunit beta type 8 [Culex quinquefasciatus]
gi|167882529|gb|EDS45912.1| proteasome subunit beta type 8 [Culex quinquefasciatus]
Length = 263
Score = 37.7 bits (87), Expect = 0.80, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
H TT L R G V++A D + + GQ + +K+ + ++ AG +AD
Sbjct: 53 HGTTTLGFRFQGGVILAVDSRATGGQFIGSQTMKKIVEI-NDYLLGTLAGGAADCV 107
>gi|258574641|ref|XP_002541502.1| proteasome component PUP1 [Uncinocarpus reesii 1704]
gi|237901768|gb|EEP76169.1| proteasome component PUP1 [Uncinocarpus reesii 1704]
Length = 277
Score = 37.7 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VVIA D + + G V N K+ + AG AG++AD
Sbjct: 29 GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYITPSIWCAG-AGTAADTEFTTAL 87
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 88 ISSNLELH 95
>gi|194756128|ref|XP_001960331.1| GF13303 [Drosophila ananassae]
gi|190621629|gb|EDV37153.1| GF13303 [Drosophila ananassae]
Length = 314
Score = 37.7 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 21/168 (12%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + G V++ D + + GQ + +K+ L ++ AG +AD
Sbjct: 70 HGTTTLGFKFQGGVILCADSRATSGQYIGSQTMKKIVEL-NDYMLGTLAGGAADCVYWDR 128
Query: 74 RLEKKLEQYPNQLL---RSSVELA--------KDWRMDKYLRNLEAMILIA-DKTITLVI 121
L K+ + QL R +V+ A ++ K + + M+L D +I
Sbjct: 129 VLAKECRLH--QLRYRKRMTVDTAARIICNISNEY---KGMGLVMGMMLAGYDDEGPKLI 183
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
+ ++ V ++GSG YAL + A ++A++A+
Sbjct: 184 YVDSEGMKSSGLVFSVGSGSPYALGVLDTGYRYDLTDQEAYDLAKRAI 231
>gi|303313742|ref|XP_003066880.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240106547|gb|EER24735.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320032577|gb|EFW14529.1| proteasome component Pre4 [Coccidioides posadasii str. Silveira]
Length = 261
Score = 37.7 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T+++ V+ DG V IA D S G + +++R + + GF G +D
Sbjct: 40 GTSVVAVKFDGGVAIAADNLASYGSLARFQDVKRLRA-FDNSSVVGFGGDVSD 91
>gi|169770057|ref|XP_001819498.1| proteasome component PUP1 [Aspergillus oryzae RIB40]
gi|238487592|ref|XP_002375034.1| proteasome component Pup1, putative [Aspergillus flavus NRRL3357]
gi|83767357|dbj|BAE57496.1| unnamed protein product [Aspergillus oryzae]
gi|220699913|gb|EED56252.1| proteasome component Pup1, putative [Aspergillus flavus NRRL3357]
Length = 272
Score = 37.7 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ D VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDNGVVIAADTRATSGPIVADKNCEKLHYISP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP 83
+ +E +
Sbjct: 88 ISSNVELHS 96
>gi|296242989|ref|YP_003650476.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095573|gb|ADG91524.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 202
Score = 37.7 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 69/164 (42%), Gaps = 17/164 (10%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T + V+ VV+A + +++ V+ ++ +KV + ++ GFAG D L LE
Sbjct: 7 TAIGVKTREGVVLASEKRLTYDGFVLSSSVKKVYAITP-HVGVGFAGLMGDVNILKRMLE 65
Query: 77 ---KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI--LIA-----DKTITLVITGMGD 126
K E + +R LAK + Y L M+ ++ + ++ +G
Sbjct: 66 MEAKYYELQHGREIR-VRGLAKMLSVILYSYKLAPMLTEIVVGGYDDNGPQLYILDPVGS 124
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
++E A+GSG AL + S AE++ +A+
Sbjct: 125 LIE--EKYAALGSGAQLALGYIEPRYNPDISLEEAEKLVVEAVK 166
>gi|242764710|ref|XP_002340830.1| proteasome component Pup1, putative [Talaromyces stipitatus ATCC
10500]
gi|218724026|gb|EED23443.1| proteasome component Pup1, putative [Talaromyces stipitatus ATCC
10500]
Length = 277
Score = 37.7 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 18/170 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ D VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIYDKGVVIAADTRATSGPIVADKNCEKLHFISP-QIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP---NQLLR--SSVELAKDWRMDKYLRNLEAMILIA----DKTITLVI--TG 123
+ +E + + R + + + K + +Y ++ A +++A T + G
Sbjct: 88 ISSNIELHSLSTGRPPRVATCMTMLKQ-HLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHG 146
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE-EIARKAMSIAADI 172
D L + +GSG A+S ++ E IA + +I A I
Sbjct: 147 STDKL----PYVTMGSGSLAAMSVFESMWKPNLDKEGAIALCSEAILAGI 192
>gi|225716640|gb|ACO14166.1| Proteasome subunit beta type-6 precursor [Esox lucius]
Length = 262
Score = 37.7 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD------- 67
TTI+ V +G VVI D + + G + K+ + I +GS+AD
Sbjct: 31 GTTIMAVEYEGGVVIGADSRTTTGAYIANRVTDKLTPI-HDRIFRCRSGSAADTQAIADI 89
Query: 68 -----AFTLLERLEKKLEQYPNQLLRSS 90
F +E E L Q L ++S
Sbjct: 90 VAYQLGFHSIELDEAPLVQAAANLFKAS 117
>gi|156096783|ref|XP_001614425.1| 20S proteasome beta subunit [Plasmodium vivax SaI-1]
gi|148803299|gb|EDL44698.1| 20S proteasome beta subunit, putative [Plasmodium vivax]
Length = 273
Score = 37.7 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 7 KHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
+ H TT L + +++A D + S+G + N K+ + K NI+ AG +
Sbjct: 53 NNKLFDFHKGTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIEINK-NILGTMAGGA 111
Query: 66 ADAFTLLERLEKKLEQY 82
AD + L K ++ Y
Sbjct: 112 ADCLYWEKYLGKIIKIY 128
>gi|147225180|emb|CAN13312.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional protease 2) [Sus scrofa]
Length = 100
Score = 37.7 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 19 LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
+ V DG VV+ D +VS G+ V+ K+ L I +GS+ADA + + +
Sbjct: 1 MAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHH-RIYCALSGSAADAQAIADMAAYQ 59
Query: 79 LEQYPNQL 86
LE + +L
Sbjct: 60 LELHGMEL 67
>gi|71022905|ref|XP_761682.1| hypothetical protein UM05535.1 [Ustilago maydis 521]
gi|46101159|gb|EAK86392.1| hypothetical protein UM05535.1 [Ustilago maydis 521]
Length = 249
Score = 37.7 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 18/170 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ VV+ D + + G V N K+ + G AG++AD + +
Sbjct: 44 GTTIVGCIFKDGVVLGADTRATEGPIVADKNCEKIHYISDNIRCCG-AGTAADTEFVTQL 102
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILI----ADKTITLVIT--G 123
+ ++ + R +++ + K R+ +Y ++ A +++ A + G
Sbjct: 103 ISSNMQLHELNTGRQPRVVTAMTMLKQ-RLFQYQGHIGAALVLGGYDATGPHLFTVAPHG 161
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-AEEIARKAMSIAADI 172
D L + +GSG A++ + A+ I A +I++ I
Sbjct: 162 STDKL----PYVTMGSGSLAAMAVFESGWVKDMERADAIGLVAAAISSGI 207
>gi|114652310|ref|XP_522798.2| PREDICTED: hypothetical protein [Pan troglodytes]
Length = 261
Score = 37.7 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 149 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 206
Query: 73 ERL 75
ERL
Sbjct: 207 ERL 209
>gi|242786412|ref|XP_002480800.1| proteasome component Pre4, putative [Talaromyces stipitatus ATCC
10500]
gi|218720947|gb|EED20366.1| proteasome component Pre4, putative [Talaromyces stipitatus ATCC
10500]
Length = 260
Score = 37.4 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T+++ V+ +G V +A D S G + ++R I GF G +D
Sbjct: 40 GTSVIAVKFNGGVAMATDNLASYGSLARFTDVNRIRT-FDDAAIVGFGGDVSD 91
>gi|159037957|ref|YP_001537210.1| 20S proteasome A and B subunits [Salinispora arenicola CNS-205]
gi|302595784|sp|A8M2A3|PSB_SALAI RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|157916792|gb|ABV98219.1| 20S proteasome A and B subunits [Salinispora arenicola CNS-205]
Length = 279
Score = 37.4 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 25 GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAGFAGSSADAFTLLERLEKKLEQY 82
G VV+AGD + ++G + + + KV + + G AG++ L+ + +LE Y
Sbjct: 63 GGVVMAGDRRATMGNLIAQRDIEKV---YPADAYSLVGMAGAAGIGIELIRLFQVELEHY 119
>gi|121710184|ref|XP_001272708.1| proteasome component Pup1, putative [Aspergillus clavatus NRRL 1]
gi|119400858|gb|EAW11282.1| proteasome component Pup1, putative [Aspergillus clavatus NRRL 1]
Length = 272
Score = 37.4 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
TTI+ D VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDNGVVIAADTRATSGPIVADKNCEKLHYIAP-KIWCAGAGTAAD 80
>gi|115918161|ref|XP_793038.2| PREDICTED: similar to proteasome subunit beta 7 [Strongylocentrotus
purpuratus]
gi|115959536|ref|XP_001185829.1| PREDICTED: similar to proteasome subunit beta 7 [Strongylocentrotus
purpuratus]
Length = 273
Score = 37.4 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + V++ D + + G V N K+ + G AG++AD +
Sbjct: 39 GTTIAGLIYKDGVILGADTRATEGTIVADKNCTKIHFIAPNIYCCG-AGTAADTEMTTQM 97
Query: 75 LEKKLEQYP 83
+ LE +
Sbjct: 98 ISSNLELHR 106
>gi|213403021|ref|XP_002172283.1| proteasome subunit beta type-7 [Schizosaccharomyces japonicus
yFS275]
gi|212000330|gb|EEB05990.1| proteasome subunit beta type-7 [Schizosaccharomyces japonicus
yFS275]
Length = 270
Score = 37.4 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 20/167 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + +V+ D + + G T+ N K+ + AG AG++AD +
Sbjct: 38 GTTIVGLIAKDCLVLGADTRATAGPTIADKNCEKLHYISPNIWCAG-AGTAADTEFVTAL 96
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKT----ITLVIT--G 123
+E + + R +++ L K + +Y ++ A +++ I G
Sbjct: 97 TSSNVELHSMYVNRKPRVITALTLLKQ-HLFRYQGHIGAYLVLGGYDCQGPHLFTIAAHG 155
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
D L +A+GSG A+S A E+ R+A+
Sbjct: 156 SSDKL----PYVALGSGSLAAISVLETKYRPDMERKEAMELVREAIE 198
>gi|156363343|ref|XP_001626004.1| predicted protein [Nematostella vectensis]
gi|156212864|gb|EDO33904.1| predicted protein [Nematostella vectensis]
Length = 279
Score = 37.4 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + V++A D + + G + +KV + ++ AG +AD + E
Sbjct: 73 HGTTTLAFKFKHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADC-SFWE 130
Query: 74 RLEKK 78
RL K
Sbjct: 131 RLLAK 135
>gi|1405329|dbj|BAA10935.1| nurse shark LMPX [Ginglymostoma cirratum]
Length = 259
Score = 37.4 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 15/166 (9%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L R V++A D + + G V +KV + ++ AG +AD
Sbjct: 53 LHGTTTLGFRFAHGVIVAVDSRATAGSYVASQTVKKVIEINPY-LLGTMAGGAADCSFWE 111
Query: 73 ERLEKKLEQYP-NQLLRSSVELAKDWRMDKYLR------NLEAMILIADKT--ITLVITG 123
L ++ Y R SV A + + ++ MI DK +
Sbjct: 112 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 171
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
G+ + + ++GSG YA S A E+A++A+
Sbjct: 172 EGNRV--SGQIFSVGSGSVYAYGVLDRAYRHDMSPTEAYELAKQAI 215
>gi|149724885|ref|XP_001504802.1| PREDICTED: similar to Proteasome subunit beta type-6 precursor
(Proteasome delta chain) (Macropain delta chain)
(Multicatalytic endopeptidase complex delta chain)
(Proteasome subunit Y) [Equus caballus]
Length = 239
Score = 37.4 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG VV+ D + + G + K+ + I +GS+AD + +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADA 92
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 93 VTYQLGFHS 101
>gi|147919477|ref|YP_686783.1| 20S proteasome, beta subunit [uncultured methanogenic archaeon
RC-I]
gi|121685330|sp|Q0W2D6|PSB_UNCMA RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|110622179|emb|CAJ37457.1| 20S proteasome, beta subunit [uncultured methanogenic archaeon
RC-I]
Length = 208
Score = 37.4 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TT + + D VV+A + + ++G + +A+K+ R+ + AGS D L
Sbjct: 6 QYKGTTTIGIICDQGVVLATERRATMGNFIASRDAQKIYRITDNAAMT-IAGSVGDGQRL 64
Query: 72 LERL--EKKL 79
L E KL
Sbjct: 65 ARILQVEAKL 74
>gi|32400975|gb|AAP80693.1| proteasome subunit [Griffithsia japonica]
Length = 220
Score = 37.4 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 27/173 (15%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V DG VV+ D + + G + + K+ + I +GS+AD + +
Sbjct: 20 GTSIMAVTFDGGVVMGADSRTTTGSYIANRVSDKITPM-TDKIFVCRSGSAADTQIISDY 78
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVITG-----MGD 126
L + +EL +D R++ R L + +K ++++ G G
Sbjct: 79 CRYYLSMHH-------IELGEDPRVETTAR-LFNQLCYHNKEMLMASIIVGGYDARKGGQ 130
Query: 127 VLE-PENGVM------AIGSGGSYALSAARALMSTQNSAE---EIARKAMSIA 169
V P G + GSG SY A S + E + A+S+A
Sbjct: 131 VFSIPLGGALIKQPFTIGGSGSSYIYGYCDANFKEGMSKDECIEFVKNALSLA 183
>gi|307195303|gb|EFN77251.1| Proteasome subunit beta type-5 [Harpegnathos saltator]
Length = 287
Score = 37.4 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 7 KHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
KH +K H TT L + G +++A D + + GQ + + +K+ + ++ AG +
Sbjct: 66 KHLKIKFDHGTTTLGFQYQGGIILAVDSRATGGQFIGSSTMKKIVEI-NDYLLGTLAGGA 124
Query: 66 ADAFTLLERLEKKLEQY 82
AD L K+ Y
Sbjct: 125 ADCVYWDRVLAKQCRMY 141
>gi|302836892|ref|XP_002950006.1| hypothetical protein VOLCADRAFT_74437 [Volvox carteri f.
nagariensis]
gi|300264915|gb|EFJ49109.1| hypothetical protein VOLCADRAFT_74437 [Volvox carteri f.
nagariensis]
Length = 272
Score = 37.4 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L V+IA D + ++G + +KV + K ++I AG +AD
Sbjct: 57 HGTTTLGFIFQHGVIIAVDSRATMGSFISSQTVKKVIEINK-HLIGTMAGGAADC 110
>gi|291403559|ref|XP_002717947.1| PREDICTED: proteasome beta 11 subunit [Oryctolagus cuniculus]
Length = 303
Score = 37.4 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
H H TT L R V+ A D + S G V +RK+ + + +++ +
Sbjct: 37 TFLQTHGPQLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKIIPVHQ-HLLGTTS 95
Query: 63 GSSADAFTLLERLEKKLE 80
G+SAD T L+++L
Sbjct: 96 GTSADCVTWYRVLQRELR 113
>gi|148227103|ref|NP_001080435.1| proteasome beta 1 subunit [Xenopus laevis]
gi|27694605|gb|AAH43739.1| Psmb1-prov protein [Xenopus laevis]
gi|114107802|gb|AAI23122.1| Psmb1 protein [Xenopus laevis]
Length = 239
Score = 37.4 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T+L + D ++A D ++S G ++ N K +L + G G AD
Sbjct: 29 NPYTFNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKL-TDKTVIGCTGFHADC 87
Query: 69 FTLLERLEKKLEQYP 83
TL + +E +L+ Y
Sbjct: 88 LTLTKIIEARLKMYK 102
>gi|323445273|gb|EGB01969.1| hypothetical protein AURANDRAFT_9896 [Aureococcus
anophagefferens]
Length = 150
Score = 37.4 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T L + V+A D ++S G ++M K+ +LG ++A AG D
Sbjct: 2 EPYDFNGGTTLAISGADFAVVAADTRMSTGYSIMTRKMSKLHQLGPNTVLAA-AGCQTDV 60
Query: 69 FTLLERLEKKLEQYPNQ 85
L++ L+ + + Y +Q
Sbjct: 61 VCLVDVLKTRQKMYKHQ 77
>gi|321464090|gb|EFX75100.1| hypothetical protein DAPPUDRAFT_306867 [Daphnia pulex]
Length = 225
Score = 37.4 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V +G VVI D + S G V K+ ++ +I +GS+AD + +
Sbjct: 25 GTSIMAVEFNGGVVIGADSRTSTGAYVANRVTDKLTKITN-HIYCCRSGSAADTQAIADI 83
Query: 75 LEKKLEQYPNQLLRS 89
+ LE + QL +
Sbjct: 84 VNYHLEFHEVQLGEA 98
>gi|269973730|emb|CBE66751.1| CG18341-PA [Drosophila ananassae]
Length = 322
Score = 37.4 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + V++ D + + G V N K+ L K G AG++AD +
Sbjct: 50 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108
Query: 75 LEKKLEQYPNQLLR 88
+L+ + R
Sbjct: 109 TSAELDMHQLNTGR 122
>gi|73962595|ref|XP_537370.2| PREDICTED: similar to proteasome beta 5 subunit [Canis familiaris]
Length = 263
Score = 37.4 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
++ +H TT L + V++A D + + G + +KV + ++ AG
Sbjct: 49 AEEPGIEMLHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGG 107
Query: 65 SADAFTLLERL 75
+AD + ERL
Sbjct: 108 AADC-SFWERL 117
>gi|269972981|emb|CBE67035.1| CG18341-PA [Drosophila atripex]
Length = 322
Score = 37.4 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + V++ D + + G V N K+ L K G AG++AD +
Sbjct: 50 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108
Query: 75 LEKKLEQYPNQLLR 88
+L+ + R
Sbjct: 109 TSAELDMHQLNTGR 122
>gi|194038909|ref|XP_001925798.1| PREDICTED: proteasome subunit beta type-11-like [Sus scrofa]
Length = 291
Score = 37.4 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
H H TT L R V+ A D + S G V +RKV + + +++ +
Sbjct: 37 TFLQTHGPRLAHGTTTLAFRFRDGVIAAADTRSSCGNYVECPASRKVIPVHQ-HLLGTTS 95
Query: 63 GSSADAFT 70
G+SAD T
Sbjct: 96 GTSADCTT 103
>gi|194763361|ref|XP_001963801.1| GF21212 [Drosophila ananassae]
gi|190618726|gb|EDV34250.1| GF21212 [Drosophila ananassae]
gi|269973738|emb|CBE66755.1| CG18341-PA [Drosophila ananassae]
gi|269973746|emb|CBE66759.1| CG18341-PA [Drosophila ananassae]
Length = 322
Score = 37.4 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + V++ D + + G V N K+ L K G AG++AD +
Sbjct: 50 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108
Query: 75 LEKKLEQYPNQLLR 88
+L+ + R
Sbjct: 109 TSAELDMHQLNTGR 122
>gi|167535742|ref|XP_001749544.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771936|gb|EDQ85595.1| predicted protein [Monosiga brevicollis MX1]
Length = 224
Score = 37.4 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
M + T++L ++ DG VVIA D +LG A R +RRL + G
Sbjct: 1 MAAPSRNPIVTGTSVLAIKFDGGVVIAAD---TLGSYGSLARFRDIRRLVSVGNQTVVGA 57
Query: 62 AGSSADAFTLLERLEK 77
+G AD ++ + L++
Sbjct: 58 SGDVADFHSMKDTLDE 73
>gi|159489510|ref|XP_001702740.1| 20S proteasome beta subunit B, type beta 2 [Chlamydomonas
reinhardtii]
gi|158280762|gb|EDP06519.1| 20S proteasome beta subunit B, type beta 2 [Chlamydomonas
reinhardtii]
Length = 270
Score = 37.4 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + VV+ D + + G TV N K+ + G AG++AD + +
Sbjct: 34 GTTIAGLIFKDGVVLGADTRSTSGSTVADKNCSKIHYITPNIYACG-AGTAADLEHVTDM 92
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 93 VSGQLALHR 101
>gi|19113087|ref|NP_596295.1| 20S proteasome component beta 1 Pre3 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|17380244|sp|O43063|PSB6_SCHPO RecName: Full=Probable proteasome subunit beta type-6; Flags:
Precursor
gi|2832891|emb|CAA16832.1| 20S proteasome component beta 1 Pre3 (predicted)
[Schizosaccharomyces pombe]
Length = 226
Score = 37.4 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +R V++A D + ++G + K+ +L NI +GS+AD T+ +
Sbjct: 24 GTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQL-TDNIWCCRSGSAADTQTVADL 82
Query: 75 LEKKLEQYP 83
L+ L Y
Sbjct: 83 LKYYLSMYR 91
>gi|269973748|emb|CBE66760.1| CG18341-PA [Drosophila ananassae]
Length = 322
Score = 37.4 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + V++ D + + G V N K+ L K G AG++AD +
Sbjct: 50 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108
Query: 75 LEKKLEQYPNQLLR 88
+L+ + R
Sbjct: 109 TSAELDMHQLNTGR 122
>gi|123121511|emb|CAM24980.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|123239245|emb|CAM25802.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|123291820|emb|CAM25486.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|168984798|emb|CAQ08452.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|168985579|emb|CAQ10290.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
Length = 131
Score = 37.4 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 19 LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
+ V DG VV+ D +VS G+ V+ K+ L + I +GS+ADA + + +
Sbjct: 1 MAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHE-RIYCALSGSAADAQAVADMAAYQ 59
Query: 79 LEQYP 83
LE +
Sbjct: 60 LELHG 64
>gi|290992091|ref|XP_002678668.1| predicted protein [Naegleria gruberi]
gi|284092281|gb|EFC45924.1| predicted protein [Naegleria gruberi]
Length = 300
Score = 37.4 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
TT L + +VIA D + S+G + N +KV + ++ AG +AD
Sbjct: 83 KGTTTLGFVFNKGIVIAVDSRASMGNYISSQNVKKVIEINPY-LLGTMAGGAADC 136
>gi|269973732|emb|CBE66752.1| CG18341-PA [Drosophila ananassae]
Length = 322
Score = 37.4 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + V++ D + + G V N K+ L K G AG++AD +
Sbjct: 50 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108
Query: 75 LEKKLEQYPNQLLR 88
+L+ + R
Sbjct: 109 TSAELDMHQLNTGR 122
>gi|160333293|ref|NP_001099197.2| proteasome subunit beta type-5 [Rattus norvegicus]
gi|149063910|gb|EDM14180.1| proteasome (prosome, macropain) subunit, beta type 5, isoform CRA_a
[Rattus norvegicus]
Length = 263
Score = 37.4 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 57 LHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 114
Query: 73 ERL 75
ERL
Sbjct: 115 ERL 117
>gi|269973728|emb|CBE66750.1| CG18341-PA [Drosophila ananassae]
gi|269973734|emb|CBE66753.1| CG18341-PA [Drosophila ananassae]
gi|269973740|emb|CBE66756.1| CG18341-PA [Drosophila ananassae]
gi|269973742|emb|CBE66757.1| CG18341-PA [Drosophila ananassae]
Length = 322
Score = 37.4 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + V++ D + + G V N K+ L K G AG++AD +
Sbjct: 50 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108
Query: 75 LEKKLEQYPNQLLR 88
+L+ + R
Sbjct: 109 TSAELDMHQLNTGR 122
>gi|302348749|ref|YP_003816387.1| Proteasome beta subunit [Acidilobus saccharovorans 345-15]
gi|302329161|gb|ADL19356.1| Proteasome beta subunit [Acidilobus saccharovorans 345-15]
Length = 207
Score = 37.4 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 16/184 (8%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL- 75
T + V+ VV+A D +++ G VM NA+KV L +G AD +L L
Sbjct: 10 TAVGVKAKDGVVLATDKRMAYGSFVMSRNAKKV-FLINNRAAIAMSGLYADVGAILRYLT 68
Query: 76 -EKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----EAMILIADKT---ITLVITGMGD 126
E K + + S ++K Y + EA++ D+ + +G
Sbjct: 69 AESKYYELTEERTMSLYAISKLLSGILYSYKMLPFIIEALVGGIDRDGQPKIYTLDSLGS 128
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
V E+ MA+GSG + AL + S AE++A A+ I+ + T I +
Sbjct: 129 V--SEDKYMAVGSGATTALGFLEDQYNDALSLDQAEQVAVGALRISMERDASTGDGIDVI 186
Query: 184 TLKV 187
++
Sbjct: 187 SIST 190
>gi|269973736|emb|CBE66754.1| CG18341-PA [Drosophila ananassae]
Length = 322
Score = 37.4 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + V++ D + + G V N K+ L K G AG++AD +
Sbjct: 50 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108
Query: 75 LEKKLEQYPNQLLR 88
+L+ + R
Sbjct: 109 TSAELDMHQLNTGR 122
>gi|312372646|gb|EFR20567.1| hypothetical protein AND_19880 [Anopheles darlingi]
Length = 257
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
H TT L R G V++A D + + GQ + +K+ + ++ AG +AD
Sbjct: 43 HGTTTLGFRFQGGVILAVDSRATGGQFIGSQTMKKIVEI-NDYLLGTLAGGAADCV 97
>gi|219125785|ref|XP_002183153.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405428|gb|EEC45371.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 197
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 65/174 (37%), Gaps = 28/174 (16%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L+ G +V A D + SLG V +KV + +++ AG +AD +
Sbjct: 5 HGTTTLSFVFQGGIVAAVDSRASLGSFVGSKTTQKVLPI-NSHMLGTMAGGAADCSFWIR 63
Query: 74 RLEKKLEQYPNQL--LRSSVELAKDWRMDKYL-------RNL----EAMILIADKTI--- 117
+L+ + + L R SV R + L R L M++ D T
Sbjct: 64 KLQGEAAMHVLTLDGRRMSVA-----RASRLLSNALYDNRKLGLSVGTMVMGFDDTETKS 118
Query: 118 ----TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
+ G +E V A+GSG ++AL + +E +
Sbjct: 119 SRARIFYVDNSGTRIE--GDVFAVGSGSTFALGILDTEKRHDLTVDEAVALGLK 170
>gi|118781366|ref|XP_559226.2| AGAP010718-PA [Anopheles gambiae str. PEST]
gi|116130136|gb|EAL41084.2| AGAP010718-PA [Anopheles gambiae str. PEST]
Length = 284
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
H TT L R G V++A D + + GQ + +K+ + ++ AG +AD
Sbjct: 72 HGTTTLGFRFQGGVILAVDSRATGGQFIGSQTMKKIVEI-NDYLLGTLAGGAADCV 126
>gi|324524031|gb|ADY48349.1| Proteasome subunit beta type-3 [Ascaris suum]
Length = 205
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQ--TVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ + TIL + + V IA D + LG+ T + N +KV +LG + G G +DA
Sbjct: 4 MSYNGGTILAMAGNECVCIATD--LRLGEQMTTIATNVKKVHKLG-DRVYIGLGGFYSDA 60
Query: 69 FTLLER 74
T+L++
Sbjct: 61 KTVLDK 66
>gi|269973744|emb|CBE66758.1| CG18341-PA [Drosophila ananassae]
Length = 322
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + V++ D + + G V N K+ L K G AG++AD +
Sbjct: 50 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108
Query: 75 LEKKLEQYPNQLLR 88
+L+ + R
Sbjct: 109 TSAELDMHQLNTGR 122
>gi|187608893|sp|P28075|PSB5_RAT RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain epsilon chain; AltName:
Full=Multicatalytic endopeptidase complex epsilon chain;
AltName: Full=Proteasome chain 6; AltName:
Full=Proteasome epsilon chain; AltName: Full=Proteasome
subunit X; Flags: Precursor
Length = 263
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 57 LHGTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 114
Query: 73 ERL 75
ERL
Sbjct: 115 ERL 117
>gi|77735687|ref|NP_001029541.1| proteasome subunit beta type-6 precursor [Bos taurus]
gi|108860907|sp|Q3MHN0|PSB6_BOVIN RecName: Full=Proteasome subunit beta type-6; Flags: Precursor
gi|75948245|gb|AAI05177.1| Proteasome (prosome, macropain) subunit, beta type, 6 [Bos taurus]
gi|296476732|gb|DAA18847.1| proteasome subunit beta type-6 precursor [Bos taurus]
Length = 239
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG VV+ D + + G + K+ + I +GS+AD + +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADA 92
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 93 VTYQLGFHS 101
>gi|300706486|ref|XP_002995504.1| hypothetical protein NCER_101573 [Nosema ceranae BRL01]
gi|239604639|gb|EEQ81833.1| hypothetical protein NCER_101573 [Nosema ceranae BRL01]
Length = 227
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
TTI+ V+ + V++ D + + G V N K+ + + G AG+S D
Sbjct: 6 GTTIVGVKFNNGVILCADTRSTSGPIVADKNCEKIHYITENIQACG-AGTSGD 57
>gi|194207138|ref|XP_001494538.2| PREDICTED: similar to proteasome beta 5 subunit [Equus caballus]
Length = 263
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 57 LHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 114
Query: 73 ERL 75
ERL
Sbjct: 115 ERL 117
>gi|23110925|ref|NP_002789.1| proteasome subunit beta type-6 precursor [Homo sapiens]
gi|20532407|sp|P28072|PSB6_HUMAN RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Macropain delta chain; AltName: Full=Multicatalytic
endopeptidase complex delta chain; AltName:
Full=Proteasome delta chain; AltName: Full=Proteasome
subunit Y; Flags: Precursor
gi|12654059|gb|AAH00835.1| Proteasome (prosome, macropain) subunit, beta type, 6 [Homo
sapiens]
gi|32879961|gb|AAP88811.1| proteasome (prosome, macropain) subunit, beta type, 6 [Homo
sapiens]
gi|48146247|emb|CAG33346.1| PSMB6 [Homo sapiens]
gi|60654877|gb|AAX32003.1| proteasome subunit beta type 6 [synthetic construct]
gi|60654879|gb|AAX32004.1| proteasome subunit beta type 6 [synthetic construct]
gi|60654881|gb|AAX32005.1| proteasome subunit beta type 6 [synthetic construct]
gi|60654883|gb|AAX32006.1| proteasome subunit beta type 6 [synthetic construct]
gi|119610813|gb|EAW90407.1| proteasome (prosome, macropain) subunit, beta type, 6 [Homo
sapiens]
gi|123980626|gb|ABM82142.1| proteasome (prosome, macropain) subunit, beta type, 6 [synthetic
construct]
gi|123995447|gb|ABM85325.1| proteasome (prosome, macropain) subunit, beta type, 6 [synthetic
construct]
gi|189053089|dbj|BAG34711.1| unnamed protein product [Homo sapiens]
gi|208967174|dbj|BAG73601.1| proteasome (prosome, macropain) subunit, beta type, 6 [synthetic
construct]
Length = 239
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG VV+ D + + G + K+ + I +GS+AD + +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADA 92
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 93 VTYQLGFHS 101
>gi|114665818|ref|XP_001161989.1| PREDICTED: proteasome subunit beta type-6 isoform 2 [Pan
troglodytes]
gi|114665820|ref|XP_511290.2| PREDICTED: proteasome subunit beta type-6 isoform 3 [Pan
troglodytes]
gi|332847025|ref|XP_003339341.1| PREDICTED: proteasome subunit beta type-6 [Pan troglodytes]
gi|332847027|ref|XP_003315370.1| PREDICTED: proteasome subunit beta type-6 [Pan troglodytes]
Length = 239
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG VV+ D + + G + K+ + I +GS+AD + +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADA 92
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 93 VTYQLGFHS 101
>gi|558528|dbj|BAA06098.1| proteasome subunit Y [Homo sapiens]
Length = 239
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG VV+ D + + G + K+ + I +GS+AD + +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADA 92
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 93 VTYQLGFHS 101
>gi|292655712|ref|YP_003535609.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|306755975|sp|D4GYZ1|PSB_HALVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|5833210|gb|AAD53406.1|AF126262_1 beta-1 subunit of 20S proteasome [Haloferax volcanii DS2]
gi|291370914|gb|ADE03141.1| proteasome beta subunit [Haloferax volcanii DS2]
Length = 243
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 69/179 (38%), Gaps = 37/179 (20%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + ++ + VV+A D + S+G V + +KV + + AGS + A +L+
Sbjct: 49 GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALT-IAGSVSAAQSLISS 107
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRM-DKYLRNLEAM----------------ILIADKT- 116
L R+ V L + R D ++ L + + D+T
Sbjct: 108 L------------RAEVRLYEARRGEDMSMQALSTLVGNFLRSGGFYVVQPILGGVDETG 155
Query: 117 -ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
I G +LE E V GSG YAL S EE +A KA+ A +
Sbjct: 156 PHIYSIDPAGSILEEEYTV--TGSGSQYALGVLEQEFEDGLSIEEAKGVATKAIRSAVE 212
>gi|260161887|dbj|BAI43477.1| proteasome subunit PSMB7 [Eptatretus stoutii]
Length = 277
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 70/195 (35%), Gaps = 40/195 (20%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + VV+ D + + V N +K+ + G AG++AD +
Sbjct: 43 GTTIAGLIFKDGVVLGADTRATEDTIVADKNCQKIHFIAPNIYCCG-AGTAADTEITTQM 101
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT--ITLVITGMGDV----- 127
+ LE + R + R+ L+ M+ +LV+ G+ D+
Sbjct: 102 ISSNLELHSLSTGRKA-------RVATACCMLKQMLFRYQGHIGASLVLGGV-DISGPSL 153
Query: 128 --LEPEN-----GVMAIGSGGSYALSA---ARALMSTQNSAEEIARKAMSIAA------- 170
+ P + +GSG A++ L + A+ + R A IA+
Sbjct: 154 YSIHPHGSTDKLPFVTLGSGSLAAMAVFEDRYKLNMEEEEAKTLVRDA--IASGIFNDLG 211
Query: 171 -----DICVYTNHNI 180
DICV T I
Sbjct: 212 SGSNIDICVITRDKI 226
>gi|322692812|gb|EFY84700.1| proteasome component PRE2 precursor [Metarhizium acridum CQMa 102]
Length = 288
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVR 50
+ +K+ H TT L R G +++A D + + G + +K R
Sbjct: 91 SNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKCR 137
>gi|1708781|emb|CAA66313.1| LMP7-like protein [Botryllus schlosseri]
Length = 257
Score = 37.4 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
H TT L + VV+A D + + G + +KV + ++ AG +AD
Sbjct: 55 HGTTTLAFKFQHGVVVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADCM 109
>gi|312129740|ref|YP_003997080.1| hypothetical protein Lbys_0997 [Leadbetterella byssophila DSM
17132]
gi|311906286|gb|ADQ16727.1| hypothetical protein Lbys_0997 [Leadbetterella byssophila DSM
17132]
Length = 901
Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 10/67 (14%)
Query: 53 GKGNIIAGFAGSSADAF--------TLLERLEKKLEQYPNQLLRSSVELA--KDWRMDKY 102
+ N++ FAGS F TL ERL K Y L R++ E A K+W+ D Y
Sbjct: 139 AENNVVTDFAGSYFSFFKKMGLVYHTLRERLAAKGVGYSGLLYRTAAEKAIDKEWKEDFY 198
Query: 103 LRNLEAM 109
L A+
Sbjct: 199 FIGLNAL 205
>gi|210148640|gb|ACJ09226.1| proteasome subunit beta 5 [Helicoverpa armigera]
Length = 280
Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
H TT L R G V++A D + + GQ + + +K+ + ++ AG +AD
Sbjct: 72 HGTTTLGFRYKGGVLLAVDSRATGGQFIGSQSMKKIVEI-NDYLLGTLAGGAADCV 126
>gi|19114737|ref|NP_593825.1| 20S proteasome component beta 5 [Schizosaccharomyces pombe 972h-]
gi|3123252|sp|P30655|PSB5_SCHPO RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain subunit pts1; AltName:
Full=Multicatalytic endopeptidase complex subunit pts1;
AltName: Full=Proteasome component pts1; Flags:
Precursor
gi|4490651|emb|CAB11483.1| 20S proteasome component beta 5 [Schizosaccharomyces pombe]
Length = 272
Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 6 DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
+KH +KM H TT L R +V+ D + S G + +KV + ++ AG
Sbjct: 51 NKHCLIKMNHGTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPY-LLGTLAGG 109
Query: 65 SADA 68
+AD
Sbjct: 110 AADC 113
>gi|302774543|ref|XP_002970688.1| hypothetical protein SELMODRAFT_227995 [Selaginella moellendorffii]
gi|300161399|gb|EFJ28014.1| hypothetical protein SELMODRAFT_227995 [Selaginella moellendorffii]
Length = 239
Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 77/187 (41%), Gaps = 25/187 (13%)
Query: 1 MVVMGDKHYAVKMH--ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
M + D + H TTI+ V VV+ D + + G V + K+ +L I
Sbjct: 1 MALSDDSSWMTAAHSMGTTIIGVEYADGVVLGADSRTTTGIYVANRASDKISKLTDNVYI 60
Query: 59 AGFAGSSADAFTLLERLEKKLEQYPNQL-----LRSSVELAKDWR-MDKYLRNLEAMILI 112
+GS+AD + + + L Q+ L ++++ +L ++ +K LEA +++
Sbjct: 61 C-RSGSAADTQVISDYVRYLLHQHTIVLGEQATVKAAAKLVREIAYSNKSF--LEAGMIV 117
Query: 113 A-----DKTITLVITGMGDVLEPENGVMAIGSGGSYA-----LSAARALMSTQNSAEEIA 162
+K + G +L GSG +Y + + + A+++
Sbjct: 118 GGWDKHEKGSIFGVPIGGTLLR--VPFTIGGSGSTYIFGFLDQAWRPGMSKQE--AQDLV 173
Query: 163 RKAMSIA 169
KA+S+A
Sbjct: 174 VKAVSLA 180
>gi|297684734|ref|XP_002819976.1| PREDICTED: proteasome subunit beta type-5-like [Pongo abelii]
Length = 270
Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 57 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 114
Query: 73 ERL 75
ERL
Sbjct: 115 ERL 117
>gi|212276161|ref|NP_001130703.1| hypothetical protein LOC100191806 [Zea mays]
gi|194689886|gb|ACF79027.1| unknown [Zea mays]
Length = 155
Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V +G VV+ D + S G V + K+ +L N+ +GS+AD + +
Sbjct: 23 GTTIVGVCYEGGVVLGADSRTSTGMYVANRASDKITQL-TDNVYVCRSGSAADTQVISDY 81
Query: 75 LEKKLEQYPNQL-LRSSVELA 94
+ L Q+ QL ++V++A
Sbjct: 82 VRYFLHQHTIQLGQPATVKVA 102
>gi|1405323|dbj|BAA10932.1| LMPX of lamprey [Petromyzon marinus]
Length = 273
Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
G+ ++ H TT L + V++A D + + G + +KV + ++ AG
Sbjct: 59 GESDVKIQFQHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAG 117
Query: 64 SSADAF 69
+AD
Sbjct: 118 GAADCM 123
>gi|301781284|ref|XP_002926051.1| PREDICTED: proteasome subunit beta type-5-like [Ailuropoda
melanoleuca]
gi|281343378|gb|EFB18962.1| hypothetical protein PANDA_015661 [Ailuropoda melanoleuca]
Length = 263
Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 57 LHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC 111
>gi|209732878|gb|ACI67308.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 232
Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 17/170 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + + G + K+ + I +GS+AD + +
Sbjct: 32 GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADI 90
Query: 75 LEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVITGM 124
+ +L + + L++++ L K +Y L A I++A DK +
Sbjct: 91 VTYQLGFHSIELDEPPLVQTAANLFKQ-TCYRYREELMAGIIVAGWDKRRGGQVYTVPMG 149
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
G ++ V GSG SY + + EE +A+++A +
Sbjct: 150 GMIVR--QPVSVGGSGSSYIYGFMDSNYKPGMTKEECLHFCTQALALAME 197
>gi|195162811|ref|XP_002022247.1| GL24711 [Drosophila persimilis]
gi|194104208|gb|EDW26251.1| GL24711 [Drosophila persimilis]
Length = 272
Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 22/169 (13%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
I+ + VV+ D + + G V N K+ L K G AG++AD + +
Sbjct: 42 IVGIIYKDGVVLGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTERTTDIISS 100
Query: 78 KLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILI--ADKT--ITLVI--TGMGD 126
+LE + R ++ + K + +Y ++ A +++ DKT I G D
Sbjct: 101 QLELHRLSTERDVRVVAANTMLKQ-MLFRYQGHISAALVLGGVDKTGPHIYCIHPHGSSD 159
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
L +GSG A+S + S +E + R A IAA I
Sbjct: 160 KL----PYATMGSGSLAAMSVFESRWKPDMSEKEAKLLVRDA--IAAGI 202
>gi|209733028|gb|ACI67383.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 232
Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 17/170 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + + G + K+ + I +GS+AD + +
Sbjct: 32 GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADI 90
Query: 75 LEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVITGM 124
+ +L + + L++++ L K +Y L A I++A DK +
Sbjct: 91 VTYQLGFHSIELDEPPLVQTAANLFKQ-TCYRYREELMAGIIVAGWDKRRGGQVYTVPMG 149
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
G ++ V GSG SY + + EE +A+++A +
Sbjct: 150 GMIVR--QPVSVGGSGSSYIYGFMDSNYKPGMTKEECLHFCTQALALAME 197
>gi|302771876|ref|XP_002969356.1| hypothetical protein SELMODRAFT_227897 [Selaginella moellendorffii]
gi|300162832|gb|EFJ29444.1| hypothetical protein SELMODRAFT_227897 [Selaginella moellendorffii]
Length = 239
Score = 37.0 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 77/187 (41%), Gaps = 25/187 (13%)
Query: 1 MVVMGDKHYAVKMH--ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
M + D + H TTI+ V VV+ D + + G V + K+ +L I
Sbjct: 1 MALSDDSSWMTAAHSMGTTIIGVEYADGVVLGADSRTTTGIYVANRASDKISKLTDNVYI 60
Query: 59 AGFAGSSADAFTLLERLEKKLEQYPNQL-----LRSSVELAKDWR-MDKYLRNLEAMILI 112
+GS+AD + + + L Q+ L ++++ +L ++ +K LEA +++
Sbjct: 61 C-RSGSAADTQVISDYVRYLLHQHTIVLGEQATVKAAAKLVREIAYSNKSF--LEAGMIV 117
Query: 113 A-----DKTITLVITGMGDVLEPENGVMAIGSGGSYA-----LSAARALMSTQNSAEEIA 162
+K + G +L GSG +Y + + + A+++
Sbjct: 118 GGWDKHEKGSIFGVPIGGTLLR--VPFTIGGSGSTYIFGFLDQAWRPGMSKQE--AQDLV 173
Query: 163 RKAMSIA 169
KA+S+A
Sbjct: 174 VKAVSLA 180
>gi|294950073|ref|XP_002786447.1| proteasome subunit, beta type, 7, putative [Perkinsus marinus ATCC
50983]
gi|239900739|gb|EER18243.1| proteasome subunit, beta type, 7, putative [Perkinsus marinus ATCC
50983]
Length = 286
Score = 37.0 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G V N K+ + + AG AG++AD ++
Sbjct: 45 GTTICGVVCASCVVLGADTRATTGPIVADKNCNKLHYMAENIYCAG-AGTAADLEHTTKK 103
Query: 75 LEKKLEQYP 83
+ ++E +
Sbjct: 104 IRSQMELHR 112
>gi|74204932|dbj|BAE20959.1| unnamed protein product [Mus musculus]
Length = 245
Score = 37.0 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ +G VV+ D + + G + K+ + +I +GS+AD + +
Sbjct: 33 GTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPI-HDHIFCCRSGSAADTQAVADA 91
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 92 VTYQLGFHS 100
>gi|222136624|ref|NP_001138398.1| proteasome subunit beta type-6 [Sus scrofa]
Length = 241
Score = 37.0 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG VV+ D + + G + K+ + I +GS+AD + +
Sbjct: 36 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADA 94
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 95 VTYQLGFHS 103
>gi|328787761|ref|XP_394680.3| PREDICTED: proteasome subunit beta type-5-like [Apis mellifera]
Length = 282
Score = 37.0 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
KH ++ H TT L + G +++A D + + GQ + + +K+ + ++ AG
Sbjct: 63 AGKHLKIRFDHGTTTLGFQYQGGIILAVDSRATGGQFIGSSTMKKIVEI-NDYLLGTLAG 121
Query: 64 SSADAF 69
+AD
Sbjct: 122 GAADCV 127
>gi|119719224|ref|YP_919719.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595702|sp|A1RWY6|PSB1_THEPD RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119524344|gb|ABL77716.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 200
Score = 37.0 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 70/181 (38%), Gaps = 22/181 (12%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + TT + + VV+A D + + G + K+ + +I A AG
Sbjct: 1 MSADLRDKVLKGTTTVGLVGKDFVVLAADRRATAGYFIANKQTWKIVEI-DSHIAATIAG 59
Query: 64 SSADAFTLLERLEKKLEQYP---NQLL--RSSVELAK----DWRMDKYLRNLEAMILI-- 112
+ DA L++RL + Y + +S LA +R ++ M++
Sbjct: 60 TVGDAQQLVDRLRVEARYYKTITGDSMPVKSVATLASLILFQYRPILSVQ----MLIGGV 115
Query: 113 -ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
+D + +G V A GSG YA+S S EE +A KA++I
Sbjct: 116 DSDGPSLFSVDWLGTVTR--EKYTATGSGSPYAVSLLEHEYREDLSLEEAVNLAVKAVNI 173
Query: 169 A 169
A
Sbjct: 174 A 174
>gi|315428112|dbj|BAJ49699.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 168
Score = 37.0 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ T L +R VVIA + + + G VM ARKV ++ ++ A AG AD
Sbjct: 12 PLYYPGATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKISN-SVGAACAGVVAD 68
>gi|254573994|ref|XP_002494106.1| Beta 5 subunit of the 20S proteasome, responsible for the
chymotryptic activity of the proteasome [Pichia pastoris
GS115]
gi|238033905|emb|CAY71927.1| Beta 5 subunit of the 20S proteasome, responsible for the
chymotryptic activity of the proteasome [Pichia pastoris
GS115]
gi|328354075|emb|CCA40472.1| 20S proteasome subunit beta 5 [Pichia pastoris CBS 7435]
Length = 281
Score = 37.0 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R +++A D + + G + KV R+ ++ AG +AD
Sbjct: 68 HGTTTLAFRFKEGIIVAVDSRATAGDWIASQTVNKVIRINP-FLLGTMAGGAADC 121
>gi|28207945|emb|CAD62626.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 37.0 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 55 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 112
Query: 73 ERL 75
ERL
Sbjct: 113 ERL 115
>gi|47028283|gb|AAT09074.1| proteasome beta subunit [Bigelowiella natans]
Length = 204
Score = 37.0 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
++ + + I+ + V IA D + + Q + + +KV ++G + G +G D T
Sbjct: 4 LQYNGSAIVAMVGKDCVAIASDMRYGIQQQTIACDMKKVFQMG-DKLFIGLSGLLTDVQT 62
Query: 71 LLERLEKKLEQYP 83
L ++ + KL+ Y
Sbjct: 63 LKQKFDFKLKMYS 75
>gi|126465836|ref|YP_001040945.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
gi|302595723|sp|A3DN27|PSB2_STAMF RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126014659|gb|ABN70037.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 208
Score = 37.0 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 65/169 (38%), Gaps = 20/169 (11%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TT + + VV+A D + + G V +K+ R+ I +G ADA + E+
Sbjct: 10 TTTVGIVVGDYVVLAADKRATAGSLVAHKRVKKIIRI-DDYIAMTISGLVADAEIIAEQA 68
Query: 76 EKKLEQYPNQLLRS----------SVELAKDWRMDKYLRNLEAMILIADKT--ITLVITG 123
+Y +L R S+ L RM Y+ L ++ D I
Sbjct: 69 RFIARKYKLELGRPIKVSALASNLSIILNAYLRMSPYIVQL--LLGGYDDNGPHLFYIDL 126
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
G + E MA GSG A + S A+E+A KA+S A
Sbjct: 127 FGSL--SEEKYMATGSGSPTAFGVLEEEYRSDLSLDEAKELAFKAVSAA 173
>gi|206602968|gb|EDZ39448.1| Putative 20S proteasome beta-subunit [Leptospirillum sp. Group II
'5-way CG']
Length = 279
Score = 37.0 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 60/169 (35%), Gaps = 16/169 (9%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK---VRRLGKGNIIAGFAGSSADAF 69
H TT+L + VV+A D Q S G V +K V R I + A
Sbjct: 55 WHGTTVLALTTRTGVVMAADRQASEGYQVADRAIQKIFPVDRTSAVAIAGAAGPAIEMAR 114
Query: 70 TLLERLE--KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI---------ADKTIT 118
+E +KLE LL + +L + R D L+ ++++ +
Sbjct: 115 LFRVEIEHYEKLEGVALSLLGKANKLGQMVR-DHLPLALQGLLVVPLYAGYDTRSGTGRI 173
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
G E E+ + GSGG +A + + L E A+
Sbjct: 174 FKYDAAGGRYE-EDTFHSNGSGGLFARNVLKMLYHPGMEEAEAVSTALR 221
>gi|116780859|gb|ABK21850.1| unknown [Picea sitchensis]
Length = 233
Score = 37.0 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 70/186 (37%), Gaps = 29/186 (15%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D A TTI+ V +G V+ D + S G V + K+ +L + +GS+
Sbjct: 4 DWINAPHSMGTTIIGVTYNGGTVLGADSRTSTGMYVANRASDKITQLTDNVYLC-RSGSA 62
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--VITG 123
AD+ + + + L Q+ QL + + K NL ++ +K +I G
Sbjct: 63 ADSQVVSDYVRYFLHQHIIQLGQPA--------TVKVTANLIRLLSYNNKNTLETGLIVG 114
Query: 124 MGDVLE-------PENGVM------AIGSGGSYALSAARALMSTQNS---AEEIARK--A 165
D E P G M GSG SY S AE + K +
Sbjct: 115 GWDKYEGGSIYSVPLGGTMLQLPFAIGGSGSSYLYGFLDQAWKDGMSKEEAEALVVKCVS 174
Query: 166 MSIAAD 171
++IA D
Sbjct: 175 LAIARD 180
>gi|123450195|ref|XP_001313725.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121895618|gb|EAY00796.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 275
Score = 37.0 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI DG VV+ D + + G V + K+ + + G AG +AD +
Sbjct: 31 GTTIAAAIFDGGVVLGADTRATAGPIVAVKDEMKLHYISDNIWVCG-AGIAADNDNINAV 89
Query: 75 LEKKLEQYPNQ 85
+ KL +
Sbjct: 90 ISAKLRLFQMN 100
>gi|332223030|ref|XP_003260674.1| PREDICTED: proteasome subunit beta type-5-like isoform 5 [Nomascus
leucogenys]
Length = 203
Score = 37.0 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 57 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 114
Query: 73 ERL 75
ERL
Sbjct: 115 ERL 117
>gi|255932587|ref|XP_002557850.1| Pc12g10270 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582469|emb|CAP80654.1| Pc12g10270 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 277
Score = 37.0 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ D VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIYDKGVVIAADTRATSGPIVADKNCEKLHYIAP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQYP 83
+ +E +
Sbjct: 88 ISSNVELHS 96
>gi|291403557|ref|XP_002718121.1| PREDICTED: proteasome beta 5 subunit [Oryctolagus cuniculus]
Length = 263
Score = 37.0 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 57 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 114
Query: 73 ERL 75
ERL
Sbjct: 115 ERL 117
>gi|222144262|ref|NP_001138404.1| proteasome subunit beta type-5 isoform 3 [Homo sapiens]
gi|194374157|dbj|BAG62391.1| unnamed protein product [Homo sapiens]
Length = 203
Score = 37.0 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 57 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 114
Query: 73 ERL 75
ERL
Sbjct: 115 ERL 117
>gi|114326381|ref|NP_001041551.1| proteasome subunit beta type-9 [Canis lupus familiaris]
gi|55162808|emb|CAH63456.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional protease 2) [Canis lupus familiaris]
Length = 209
Score = 37.0 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
TTI+ V DG VV+ D +VS G+ V+ K+ L + +I +GS
Sbjct: 10 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRAFNKLSPLHQ-HIYCALSGS 58
>gi|639871|dbj|BAA08204.1| proteasome subunit RCX [Rattus rattus]
Length = 208
Score = 37.0 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 2 LHGTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIEINPY-LLGTMAGGAADC 56
>gi|158314139|ref|YP_001506647.1| hypothetical protein Franean1_2307 [Frankia sp. EAN1pec]
gi|158109544|gb|ABW11741.1| conserved hypothetical protein [Frankia sp. EAN1pec]
Length = 195
Score = 37.0 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 66/179 (36%), Gaps = 43/179 (24%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
T I+ V DG VVI GD G ++ KV R G + GF D+F +
Sbjct: 2 TCIVGVEHDGRVVIGGDSAGVAGWSITVRADTKVFR--NGEFVMGF----TDSFRM---- 51
Query: 76 EKKLEQYPNQLLRSSV--ELAKDWRMDKYLRNLEAMILIAD---------------KTIT 118
QLLR S+ + W +D+++ E + ++ D
Sbjct: 52 --------GQLLRYSLVPPVPHSWDLDRFMAT-EFVSVVRDCLRDGGFARNDAGNESGGL 102
Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALS------AARALMST-QNSAEEIARKAMSIAA 170
++ G + ++ + +Y + A +L ST EE RKA+ AA
Sbjct: 103 FLVGIRGQLYRIDSDYQIGRTLDNYDAAGCGEEYARGSLHSTVGEEPEERVRKALEAAA 161
>gi|125978307|ref|XP_001353186.1| GA17382 [Drosophila pseudoobscura pseudoobscura]
gi|54641939|gb|EAL30688.1| GA17382 [Drosophila pseudoobscura pseudoobscura]
Length = 272
Score = 37.0 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 22/169 (13%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
I+ + VV+ D + + G V N K+ L K G AG++AD + +
Sbjct: 42 IVGIIYKDGVVLGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTERTTDIISS 100
Query: 78 KLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILI--ADKT--ITLVI--TGMGD 126
+LE + R ++ + K + +Y ++ A +++ DKT I G D
Sbjct: 101 QLELHRLSTERDVRVVAANTMLKQ-MLFRYQGHISAALVLGGVDKTGPHIYCIHPHGSSD 159
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
L +GSG A+S + S A+ + R A IAA I
Sbjct: 160 KL----PYATMGSGSLAAMSVFESRWKPDMSENEAKLLVRDA--IAAGI 202
>gi|331240621|ref|XP_003332961.1| proteasome subunit beta type-5 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309311951|gb|EFP88542.1| proteasome subunit beta type-5 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 319
Score = 37.0 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R +++A D + + G + +KV + ++ AG +AD
Sbjct: 103 HGTTTLAFRFQHGIIVAVDSRATAGSYIASGTVKKVIEINP-FLLGTMAGGAADC 156
>gi|19173511|ref|NP_597314.1| 20S PROTEASOME BETA-TYPE SUBUNIT COMPONENT PRE2 [Encephalitozoon
cuniculi GB-M1]
gi|19171100|emb|CAD26490.1| 20S PROTEASOME BETA-TYPE SUBUNIT COMPONENT PRE2 [Encephalitozoon
cuniculi GB-M1]
Length = 229
Score = 37.0 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF-- 69
H TT L +VIA D + + G + KV + K N++ AG +AD
Sbjct: 28 PYHGTTTLAFIFKEGMVIAVDSRATSGSYIASQTVNKVININK-NLLGTMAGGAADCLFW 86
Query: 70 -TLLERLEKKLEQYPN 84
L+ K E
Sbjct: 87 ENLMGLYAKNYELTNG 102
>gi|145483595|ref|XP_001427820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145552816|ref|XP_001462083.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394903|emb|CAK60422.1| unnamed protein product [Paramecium tetraurelia]
gi|124429921|emb|CAK94710.1| unnamed protein product [Paramecium tetraurelia]
Length = 239
Score = 37.0 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
D+ ++ T+L V G V++AGD ++S G ++ +A K+ +L ++A AG
Sbjct: 26 SDQWSPYHDNSGTVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVLAT-AGQ 84
Query: 65 SADAFTLLERLEKKLEQY 82
AD L + L+++L+ Y
Sbjct: 85 YADFIALRKFLQQRLQLY 102
>gi|59275962|dbj|BAD89549.1| proteasome subunit [Oncorhynchus mykiss]
gi|225705848|gb|ACO08770.1| Proteasome subunit beta type 7 precursor [Oncorhynchus mykiss]
gi|306494797|gb|ADM95869.1| PSMB10 [Oncorhynchus mykiss]
Length = 277
Score = 37.0 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 31/197 (15%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
G M TTI V VV+ D + + G+ V K+ + G AG
Sbjct: 32 GQTKAPKPMKTGTTIAGVLCKNGVVLGADTRATSGEVVADKMCAKIHYISPNIYCCG-AG 90
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----AD 114
++AD + L L + R+ +V + +D + +Y + A +++
Sbjct: 91 TAADTEKTTDLLSSNLTIFSMNSGRNPRVVMAVNILQD-MLFRYRGQIGASLILGGVDCT 149
Query: 115 KTITLVITGMGDVLEPENGV--MAIGSGGSYALSAA--RALMSTQN-SAEEIARKAMS-- 167
+ G + + V +A+GSG AL R + + A+E+ R A+
Sbjct: 150 GNHLYKVGPYGSI----DNVPYLAMGSGDLAALGILEDRFKANMEMEEAKELVRDAIHSG 205
Query: 168 IAA--------DICVYT 176
I + DICV T
Sbjct: 206 IMSDLGSGNNIDICVIT 222
>gi|223997434|ref|XP_002288390.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975498|gb|EED93826.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 207
Score = 37.0 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 20/147 (13%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVR----RLGKGNIIAGFAGSSADAFT 70
TTIL VR +G +V+ D + S+ V A K+ R + +GS+AD
Sbjct: 9 GTTILAVRYNGGIVVGADTRTSVSGYVSNRYAAKLTFVLDREWTSTCVICRSGSAADTQH 68
Query: 71 LLERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL----- 119
L + +L + ++ L+++ +++ NL A ++ A L
Sbjct: 69 LASVIRTELVARQLLYRIRGTVSHAA-SLSRNLLVNEP--NLSASLICAGYDHVLGRGVI 125
Query: 120 -VITGMGDVLEPENGVMAIGSGGSYAL 145
I+ G V E E A GSG SY L
Sbjct: 126 YTISPGGTVFE-ERAWAAGGSGSSYIL 151
>gi|209735834|gb|ACI68786.1| Proteasome subunit beta type-6 precursor [Salmo salar]
Length = 232
Score = 37.0 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + + G + K+ + I +GS+AD + +
Sbjct: 32 GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADI 90
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 91 VTYQLGFHS 99
>gi|296214536|ref|XP_002753673.1| PREDICTED: proteasome subunit beta type-5-like [Callithrix jacchus]
Length = 268
Score = 36.6 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 62 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 119
Query: 73 ERL 75
ERL
Sbjct: 120 ERL 122
>gi|301117144|ref|XP_002906300.1| proteasome subunit beta type-7, putative [Phytophthora infestans
T30-4]
gi|262107649|gb|EEY65701.1| proteasome subunit beta type-7, putative [Phytophthora infestans
T30-4]
Length = 289
Score = 36.6 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI VV+ D + + G VM N K+ + G AG++AD
Sbjct: 52 GTTI------DGVVLGADTRSTGGSIVMDKNCEKIHYIAPNIYCCG-AGTAADTENTTAL 104
Query: 75 LEKKLEQYPNQ 85
+ +LE +
Sbjct: 105 ISSQLELHRLN 115
>gi|195383886|ref|XP_002050656.1| GJ20086 [Drosophila virilis]
gi|194145453|gb|EDW61849.1| GJ20086 [Drosophila virilis]
Length = 222
Score = 36.6 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + S G V K+ ++ + NI +GS+AD + +
Sbjct: 15 GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTQISE-NIYCCRSGSAADTQAIADI 73
Query: 75 LEKKLEQYPNQ 85
+ L + NQ
Sbjct: 74 VAYSLNYHRNQ 84
>gi|160331715|ref|XP_001712564.1| prsB7 [Hemiselmis andersenii]
gi|159766013|gb|ABW98239.1| prsB7 [Hemiselmis andersenii]
Length = 245
Score = 36.6 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+++K TTI + +++A D + + G+ + N K+ + G AG+SAD
Sbjct: 36 FSIKKTGTTICGMVFKHGILLASDTRATNGEIICDTNCEKIHFIAPNICCCG-AGTSADT 94
Query: 69 FTLLERLEKKLE 80
+ + L +LE
Sbjct: 95 ENITKLLSNQLE 106
>gi|50289565|ref|XP_447214.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526523|emb|CAG60147.1| unnamed protein product [Candida glabrata]
Length = 194
Score = 36.6 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
IL +R V++A V+ G +V+K + K R L ++ F G + D E ++
Sbjct: 4 ILGIRVQDSVILATSKAVTRGISVLKDSDDKSRLLSPHTLMT-FTGEAGDTVQFAEYIQA 62
Query: 78 KLEQY----PNQLLRSSV------ELAKDWRMDK 101
++ Y +L S+V ELAK R K
Sbjct: 63 NMQLYSIRENYELSPSAVSSYVRQELAKSIRSRK 96
>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex, beta component [Methanothermus
fervidus DSM 2088]
gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
fervidus DSM 2088]
Length = 211
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 64/175 (36%), Gaps = 19/175 (10%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M +++ TT + + +V A + + +LG + K+ ++ ++ AG
Sbjct: 1 MSNRNN---FKGTTTVGIVCKDGIVFASEKRATLGNLIAHKAVDKIFKI-DEHLATTVAG 56
Query: 64 SSADAFTLLERLEK-----KLEQYPNQLLRSSVELAKD-WRMDKYLRNLEAMILIADKTI 117
S DA L+E L+ KL +R++ +A + + + M++
Sbjct: 57 SVGDAQKLVEYLKAEVRLYKLRTGKPATVRAAASIASNILHASRMFPFIVQMLIGGIDET 116
Query: 118 ---TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
+ G +E + ++ GSG A S A++IA
Sbjct: 117 GPKIYSVDPAGGKIE--DKYVSTGSGSPIAYGVLEDRYKKDMS----VEDAINIA 165
>gi|225192971|dbj|BAH29686.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 32 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 91 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 149
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 150 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 204
Query: 171 -DICVYT 176
DICV T
Sbjct: 205 IDICVIT 211
>gi|294890789|ref|XP_002773315.1| proteasome subunit, beta type, 7, putative [Perkinsus marinus ATCC
50983]
gi|239878367|gb|EER05131.1| proteasome subunit, beta type, 7, putative [Perkinsus marinus ATCC
50983]
Length = 289
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G V N K+ + + AG AG++AD ++
Sbjct: 45 GTTICGVVCASCVVLGADTRATTGPIVADKNCNKLHYMAENIYCAG-AGTAADLEHTTKK 103
Query: 75 LEKKLEQYP 83
+ ++E +
Sbjct: 104 IRSQMELHR 112
>gi|225193001|dbj|BAH29630.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193016|dbj|BAH29640.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 32 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 91 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 149
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 150 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 204
Query: 171 -DICVYT 176
DICV T
Sbjct: 205 IDICVIT 211
>gi|109082916|ref|XP_001105158.1| PREDICTED: proteasome subunit beta type-5 [Macaca mulatta]
Length = 263
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 57 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC 111
>gi|195383604|ref|XP_002050516.1| GJ22197 [Drosophila virilis]
gi|194145313|gb|EDW61709.1| GJ22197 [Drosophila virilis]
Length = 221
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 29/176 (16%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TTI+ V DG VV+ D + S V +A K+ R+ +I +GS++ TL
Sbjct: 7 FGGTTIIAVEFDGGVVMGADSRTSCRTYVSNRSADKLTRI-TDHIYCCRSGSASQTQTLA 65
Query: 73 ERLEKKLEQYPNQ-----LLR-SSVELAKDWRMDKYLRNLEAMI---LIA--DKTI---- 117
+ + Y L+R ++V +K + + M+ ++A D+
Sbjct: 66 NTVAYAMNYYECSMGEPALVRDAAVHF-----RNKIYDSRQTMMASIIVAGWDRRHGGQV 120
Query: 118 -TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIA 169
++ ITG L GSG +Y A E+ + A+ +A
Sbjct: 121 YSVPITG----LMVHEPCAVAGSGAAYIQGFVTAHYRPGMQQADTVELVKNAVQLA 172
>gi|83035093|ref|NP_001032701.1| proteasome subunit beta type-5 precursor [Bos taurus]
gi|122138604|sp|Q32KL2|PSB5_BOVIN RecName: Full=Proteasome subunit beta type-5; Flags: Precursor
gi|81673887|gb|AAI10040.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Bos taurus]
gi|296483649|gb|DAA25764.1| proteasome subunit beta type-5 precursor [Bos taurus]
Length = 263
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 57 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC 111
>gi|4506201|ref|NP_002788.1| proteasome subunit beta type-5 isoform 1 [Homo sapiens]
gi|197099702|ref|NP_001126063.1| proteasome subunit beta type-5 precursor [Pongo abelii]
gi|187608890|sp|P28074|PSB5_HUMAN RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain epsilon chain; AltName:
Full=Multicatalytic endopeptidase complex epsilon chain;
AltName: Full=Proteasome chain 6; AltName:
Full=Proteasome epsilon chain; AltName: Full=Proteasome
subunit MB1; AltName: Full=Proteasome subunit X; Flags:
Precursor
gi|187608892|sp|Q5R8S2|PSB5_PONAB RecName: Full=Proteasome subunit beta type-5; Flags: Precursor
gi|1262338|emb|CAA64838.1| proteasome [Homo sapiens]
gi|35505516|gb|AAH57840.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Homo
sapiens]
gi|55730230|emb|CAH91838.1| hypothetical protein [Pongo abelii]
gi|78395069|gb|AAI07721.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Homo
sapiens]
gi|119586597|gb|EAW66193.1| proteasome (prosome, macropain) subunit, beta type, 5, isoform
CRA_a [Homo sapiens]
gi|119586599|gb|EAW66195.1| proteasome (prosome, macropain) subunit, beta type, 5, isoform
CRA_a [Homo sapiens]
gi|189053214|dbj|BAG34836.1| unnamed protein product [Homo sapiens]
gi|261861254|dbj|BAI47149.1| proteasome (prosome, macropain) subunit, beta type, 5 [synthetic
construct]
gi|312153006|gb|ADQ33015.1| proteasome (prosome, macropain) subunit, beta type, 5 [synthetic
construct]
Length = 263
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 57 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC 111
>gi|269986877|gb|EEZ93154.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 206
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 74/191 (38%), Gaps = 30/191 (15%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT L + V++A D + + V NA KV + G+I AG AD ++
Sbjct: 7 GTTTLGLVYKDGVILAADRRATADHIVANKNAEKVMAIS-GSIGITTAGMVADLQAMVRL 65
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL------VITGMGDVL 128
+ +L Y +RS +L D + L A++ +K ++L I G D
Sbjct: 66 MRSELTLYE---IRSGSKLD----TDGAVSLLSAVL--FNKRLSLNLIYGEFIVGGYDTA 116
Query: 129 -----------EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS-IAADI--CV 174
+ ++ GSGG +AL S EE + A I++ I V
Sbjct: 117 PKLFSIDEAGGQGKDKFTVTGSGGVFALGVLEGDYKDNMSEEEAVKLAYKAISSSIRRDV 176
Query: 175 YTNHNIVLETL 185
YT I + +
Sbjct: 177 YTGEGIDIAVI 187
>gi|73540999|ref|YP_295519.1| 20S proteasome, A and B subunits [Ralstonia eutropha JMP134]
gi|72118412|gb|AAZ60675.1| 20S proteasome, A and B subunits [Ralstonia eutropha JMP134]
Length = 205
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 25/168 (14%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLER 74
TT + VRK V IA D V+ G T + + +++ G+ AG++A +
Sbjct: 2 TTCVVVRKGAEVAIAADALVTFGDTRLSRAYERNQKVFPIGDSFVALAGTTAHFPVMRAL 61
Query: 75 LEKKLEQY----PNQLLRSSVEL-----------AKDWRMDKYLRNLEAMILI---ADKT 116
L E+ + + R+ +++ K+ D Y E+ ++ A+
Sbjct: 62 LAGMGEECRLGSRDDVFRTFLKVHEKLKSEYFINTKEDEDDPY----ESSQIVCLIANPA 117
Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIAR 163
+ +V + IGSG +YAL A A+ A +AR
Sbjct: 118 GIFGVYSYREVFS-FDRFWGIGSGRNYALGAMHAVYDKPDLDAAAVAR 164
>gi|238231384|ref|NP_032972.3| proteasome subunit beta type-6 precursor [Mus musculus]
gi|84028244|sp|Q60692|PSB6_MOUSE RecName: Full=Proteasome subunit beta type-6; AltName: Full=Low
molecular mass protein 19; AltName: Full=Macropain delta
chain; AltName: Full=Multicatalytic endopeptidase
complex delta chain; AltName: Full=Proteasome delta
chain; AltName: Full=Proteasome subunit Y; Flags:
Precursor
gi|26347247|dbj|BAC37272.1| unnamed protein product [Mus musculus]
gi|56205379|emb|CAI24014.1| proteasome (prosome, macropain) subunit beta type 6 [Mus musculus]
gi|74189010|dbj|BAE39271.1| unnamed protein product [Mus musculus]
gi|74191020|dbj|BAE39351.1| unnamed protein product [Mus musculus]
gi|123233520|emb|CAM28118.1| proteasome (prosome, macropain) subunit beta type 6 [Mus musculus]
gi|148680630|gb|EDL12577.1| mCG21162, isoform CRA_b [Mus musculus]
gi|745475|prf||2016287A housekeeping proteasome:SUBUNIT=2
Length = 238
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ +G VV+ D + + G + K+ + +I +GS+AD + +
Sbjct: 33 GTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPI-HDHIFCCRSGSAADTQAVADA 91
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 92 VTYQLGFHS 100
>gi|225193073|dbj|BAH29678.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 32 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 91 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 149
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 150 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 204
Query: 171 -DICVYT 176
DICV T
Sbjct: 205 IDICVIT 211
>gi|225192977|dbj|BAH29682.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193013|dbj|BAH29638.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193034|dbj|BAH29652.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193037|dbj|BAH29654.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193040|dbj|BAH29656.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193049|dbj|BAH29662.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193064|dbj|BAH29672.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193067|dbj|BAH29674.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 32 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 91 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 149
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 150 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 204
Query: 171 -DICVYT 176
DICV T
Sbjct: 205 IDICVIT 211
>gi|225192948|dbj|BAH29698.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193022|dbj|BAH29644.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193031|dbj|BAH29650.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193061|dbj|BAH29670.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 32 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 91 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 149
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 150 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 204
Query: 171 -DICVYT 176
DICV T
Sbjct: 205 IDICVIT 211
>gi|225192942|dbj|BAH29702.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 32 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 91 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 149
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 150 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 204
Query: 171 -DICVYT 176
DICV T
Sbjct: 205 IDICVIT 211
>gi|58220851|dbj|BAB83847.2| PSMB10 [Oryzias latipes]
gi|295901496|dbj|BAJ07260.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|295901530|dbj|BAJ07282.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|295901532|dbj|BAJ07283.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 275
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 41 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 99
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 100 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 158
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 159 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 213
Query: 171 -DICVYT 176
DICV T
Sbjct: 214 IDICVIT 220
>gi|31874085|emb|CAD97956.1| hypothetical protein [Homo sapiens]
Length = 266
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 60 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC 114
>gi|68076731|ref|XP_680285.1| proteasome beta-subunit [Plasmodium berghei strain ANKA]
gi|56501197|emb|CAH98231.1| proteasome beta-subunit, putative [Plasmodium berghei]
Length = 256
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+++ ++ V+IA D + S G N +++ ++ +++ F+G ADA L E
Sbjct: 9 GTSVIALKYRNGVMIAADKKASYGSYAKFQNVQRIFKISNKTVMS-FSGELADAQYLHEL 67
Query: 75 L 75
L
Sbjct: 68 L 68
>gi|82705582|ref|XP_727029.1| proteasome subunit beta [Plasmodium yoelii yoelii str. 17XNL]
gi|23482682|gb|EAA18594.1| proteasome beta-subunit [Plasmodium yoelii yoelii]
Length = 256
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+++ ++ V+IA D + S G N +++ ++ +++ F+G ADA L E
Sbjct: 9 GTSVIALKYRNGVMIAADKKASYGSYAKFQNVQRIFKISNKTVMS-FSGELADAQYLHEL 67
Query: 75 L 75
L
Sbjct: 68 L 68
>gi|225192968|dbj|BAH29688.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 36.6 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 32 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 91 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 149
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 150 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 204
Query: 171 -DICVYT 176
DICV T
Sbjct: 205 IDICVIT 211
>gi|62122594|dbj|BAD93262.1| PSMB9-like [Oryzias latipes]
Length = 217
Score = 36.6 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 20/170 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TTIL D VVI D + S+ G+ V KV ++ I AGS ADA + +
Sbjct: 16 GTTILAAVFDRGVVIGSDSRASIGGEYVSSKTINKVIQV-HDRIFCCMAGSLADAQAVTK 74
Query: 74 RLEKKLEQYPNQL------LRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVIT 122
+ +L + Q+ + ++ L + +K L+A + A DK V++
Sbjct: 75 TAKFQLSFHSIQMESPPLVISAASVLKQLCYNNK--EELQAGFITAGWDKKKGPQVYVVS 132
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G ++ V GSG +Y A + EE A A+++A
Sbjct: 133 LGGMMI--SQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALA 180
>gi|332223022|ref|XP_003260670.1| PREDICTED: proteasome subunit beta type-5-like isoform 1 [Nomascus
leucogenys]
Length = 263
Score = 36.6 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 57 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC 111
>gi|315518868|dbj|BAJ51764.1| proteasome subunit, beta type 10 [Oryzias matanensis]
Length = 261
Score = 36.6 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 27 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 85
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 86 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 144
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 145 SV----NKVPYLAMGSGDLAALGILEDAFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 199
Query: 171 -DICVYT 176
DICV T
Sbjct: 200 IDICVIT 206
>gi|154278908|ref|XP_001540267.1| proteasome component Pre4 [Ajellomyces capsulatus NAm1]
gi|150412210|gb|EDN07597.1| proteasome component Pre4 [Ajellomyces capsulatus NAm1]
Length = 260
Score = 36.6 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ K+ T+++ V+ +G V IA D S G + +++R ++ GF G +D
Sbjct: 34 QSPKVTGTSVIAVKFNGGVAIATDNLASYGSLARFTDIKRLRSFDNSTVL-GFGGDVSD 91
>gi|224473816|gb|ACN49157.1| proteasome subunit beta type 10 [Oryzias dancena]
Length = 275
Score = 36.6 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 71/200 (35%), Gaps = 33/200 (16%)
Query: 3 VMGDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
+ + H M TTI V VV+ D + + + V K+ + G
Sbjct: 28 LFEEGHPPKPMKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG- 86
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI---- 112
AG++AD + L L + R+ +V + +D + +Y + A +++
Sbjct: 87 AGTAADTEKTTDLLSSNLTIFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVD 145
Query: 113 ADKTITLVITGMGDVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
+ G V N V +A+GSG AL A+++ R A+
Sbjct: 146 CTGNHLYTVGPYGSV----NKVPYLAMGSGELAALGVLEDGFKHDLELEKAKKLVRDAVH 201
Query: 168 IAA-----------DICVYT 176
A DICV T
Sbjct: 202 -AGIMSDLGSGNNIDICVIT 220
>gi|219127992|ref|XP_002184208.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404439|gb|EEC44386.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 187
Score = 36.6 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 15/170 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE- 73
TT++ ++ G VV+ D + S+ V A K+ L ++ +GS+AD + E
Sbjct: 2 GTTLVAIKYRGGVVVGADSRTSVSGYVSHRFAHKIAPLTDHTVLL-RSGSAADTQQIAES 60
Query: 74 -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--ILIAD------KTITLVITGM 124
R+ +Y ++ + ++A R Y + E + +L+A K+ ++
Sbjct: 61 ARMTFLHRRYRCGIVPTVSQVAHWIRSTVYEESTEGVVSLLVAGFDPESLKSRIFSVSPS 120
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
G ++E E GSG +Y L +S S A E+ +KA+ +A D
Sbjct: 121 GALIE-EKTFAVSGSGSTYVLGYLDHHVSGDLSENEAIELCQKAIELAID 169
>gi|47216876|emb|CAG11683.1| unnamed protein product [Tetraodon nigroviridis]
Length = 270
Score = 36.6 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + + V++A D + S G + A+KV + ++ +GS+AD E
Sbjct: 67 HGTTTLAFKFNQGVIVAVDSRASAGSYIASPVAKKVIEINPY-LLGTMSGSAADCM-YWE 124
Query: 74 RLEKK 78
RL K
Sbjct: 125 RLLAK 129
>gi|261201312|ref|XP_002627056.1| proteasome component Pre4 [Ajellomyces dermatitidis SLH14081]
gi|239592115|gb|EEQ74696.1| proteasome component Pre4 [Ajellomyces dermatitidis SLH14081]
gi|239611722|gb|EEQ88709.1| proteasome component Pre4 [Ajellomyces dermatitidis ER-3]
gi|327348262|gb|EGE77119.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC
18188]
Length = 260
Score = 36.6 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T+++ V+ +G V IA D S G + +++R + GF G +D
Sbjct: 40 GTSVIAVKFNGGVAIAADNLASYGSLARFTDIKRLRP-FDNAAVIGFGGDVSD 91
>gi|225193007|dbj|BAH29634.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 36.6 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 32 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 91 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 149
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 150 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 204
Query: 171 -DICVYT 176
DICV T
Sbjct: 205 IDICVIT 211
>gi|225192986|dbj|BAH29620.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225192992|dbj|BAH29624.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 36.6 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 32 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 91 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 149
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 150 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 204
Query: 171 -DICVYT 176
DICV T
Sbjct: 205 IDICVIT 211
>gi|66271073|gb|AAY43813.1| beta1 proteasome-7D [Aegilops tauschii]
gi|66271075|gb|AAY43814.1| beta1 proteasome-7D [Aegilops tauschii]
Length = 246
Score = 36.6 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 19/172 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V G VV+A D + S G V + K+ +L N+ +GS+AD + +
Sbjct: 25 GTTIVGVCYAGGVVLAADSRTSTGMYVANRASDKISQL-TDNVYVCRSGSAADTQVISDY 83
Query: 75 LEKKLEQYPNQL-LRSSVELAKDW-RMDKYLRN--LEAMILIA--DK---TITLVITGMG 125
+ L Q+ QL ++V++A + R+ Y L+A +++ DK + G
Sbjct: 84 VRYFLHQHTIQLGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVPLGG 143
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK------AMSIAAD 171
+L GSG SY + EE A K +++IA D
Sbjct: 144 TILR--QPFAIGGSGSSYLYGLMDHEWKEGMTQEE-AEKFVVKVVSLAIARD 192
>gi|326427299|gb|EGD72869.1| LMP X protein [Salpingoeca sp. ATCC 50818]
Length = 292
Score = 36.6 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 47/182 (25%), Positives = 69/182 (37%), Gaps = 32/182 (17%)
Query: 6 DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
D ++ H TT L + V+IA D + S G + +KV + ++ AG
Sbjct: 69 DSKVKIQFAHGTTTLGFKFQHGVIIAVDSRASAGSYIASQTVKKVIEINPY-LLGTMAGG 127
Query: 65 SADAFTLLERLEKK----LEQYPNQLLRSSVELAKDWRMDKYLRN-----------LEAM 109
+AD + ER+ K E R SV A K L N + M
Sbjct: 128 AADC-SYWERVLAKECRLFELRNG--ERISVAAAS-----KILANIVYHYRGMGLSMGTM 179
Query: 110 ILIADKT--ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARK 164
I DK + G L N + ++GSG +YA A S A E+AR+
Sbjct: 180 ICGWDKKGPGLFYVDSDGTRLT--NNLFSVGSGSTYAYGVLDAGYRWDLSVEEAHELARR 237
Query: 165 AM 166
A+
Sbjct: 238 AI 239
>gi|224473833|gb|ACN49172.1| antigen processing proteasome-associated protein [Oryzias
luzonensis]
Length = 275
Score = 36.6 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 41 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 99
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 100 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 158
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 159 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 213
Query: 171 -DICVYT 176
DICV T
Sbjct: 214 IDICVIT 220
>gi|225192963|dbj|BAH29690.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225192974|dbj|BAH29684.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225192980|dbj|BAH29680.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225192998|dbj|BAH29628.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193010|dbj|BAH29636.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193046|dbj|BAH29660.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193052|dbj|BAH29664.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 36.6 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 32 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 91 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 149
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 150 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 204
Query: 171 -DICVYT 176
DICV T
Sbjct: 205 IDICVIT 211
>gi|194886434|ref|XP_001976612.1| GG19922 [Drosophila erecta]
gi|190659799|gb|EDV57012.1| GG19922 [Drosophila erecta]
Length = 252
Score = 36.6 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 19/88 (21%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANA------RKVRR--LGKGNIIAGFAGSS 65
+T++ +R + +VI V K +A R VR+ L +++ F+G +
Sbjct: 30 RGSTVVGLRTNNAIVIG----------VEKRSAGELQEERVVRKICLLDDHLVMTFSGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQLLR-SSVE 92
ADA L+ R + + + + + ++VE
Sbjct: 80 ADARILVGRAQMEAQSHRLNFEKPATVE 107
>gi|119586598|gb|EAW66194.1| proteasome (prosome, macropain) subunit, beta type, 5, isoform
CRA_b [Homo sapiens]
Length = 148
Score = 36.6 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 2 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC 56
>gi|125811046|ref|XP_001361733.1| GA11556 [Drosophila pseudoobscura pseudoobscura]
gi|54636909|gb|EAL26312.1| GA11556 [Drosophila pseudoobscura pseudoobscura]
Length = 279
Score = 36.6 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
H TT L + G V++A D + + GQ + +K+ + ++ AG +AD
Sbjct: 72 HGTTTLGFKYQGGVILAVDSRATGGQYIGSQTMKKIVEI-NDFLLGTLAGGAADCV 126
>gi|307110687|gb|EFN58923.1| hypothetical protein CHLNCDRAFT_56983 [Chlorella variabilis]
Length = 275
Score = 36.6 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L G V+IA D + S G + +KV + +++ AG +AD
Sbjct: 58 HGTTTLGFIFQGGVIIAVDSRASQGSYISSQTVKKVIEINP-HLLGTMAGGAADC 111
>gi|297699722|ref|XP_002826924.1| PREDICTED: proteasome subunit beta type-6-like [Pongo abelii]
Length = 239
Score = 36.6 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG VV+ D + + G + K+ + +I +GS+AD + +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDHIFCCRSGSAADTQAVADA 92
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 93 VTYQLGFHS 101
>gi|225192995|dbj|BAH29626.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193043|dbj|BAH29658.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 36.6 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 32 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 91 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 149
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 150 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 204
Query: 171 -DICVYT 176
DICV T
Sbjct: 205 IDICVIT 211
>gi|239909038|ref|YP_002955780.1| short-chain dehydrogenase/reductase SDR family protein
[Desulfovibrio magneticus RS-1]
gi|239798905|dbj|BAH77894.1| short-chain dehydrogenase/reductase SDR family protein
[Desulfovibrio magneticus RS-1]
Length = 737
Score = 36.6 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 83 PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGS 142
++L ++V+LAKD D +R+ +A+ + M DVL G++ + G
Sbjct: 529 QDRLNVAAVDLAKDCDTDVSVRHFDALDFAGHAAFFDSLDPMPDVLVLAFGLLGDQAAGQ 588
Query: 143 YALSAARALMSTQNSAEEIARKAMSIAAD 171
+AAR ++ T +A A + IAAD
Sbjct: 589 RDFAAARTVIDTNFTA---AVSILEIAAD 614
>gi|307190437|gb|EFN74473.1| Proteasome subunit beta type-6 [Camponotus floridanus]
Length = 229
Score = 36.6 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 3 VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
+M D + + T+I+ DG VVI D + + G V A K+ R+ I +
Sbjct: 17 MMPDWLNSEQSTGTSIMACEFDGGVVIGADSRGTTGAYVSNRYADKLTRV-TDYIYCCRS 75
Query: 63 GSSADAFTLLERLEKKLEQYPNQL 86
GS+AD + + + L + +L
Sbjct: 76 GSAADTQAIADIVAYHLGLHQMEL 99
>gi|298674378|ref|YP_003726128.1| proteasome endopeptidase complex subunit beta [Methanohalobium
evestigatum Z-7303]
gi|298287366|gb|ADI73332.1| proteasome endopeptidase complex, beta subunit [Methanohalobium
evestigatum Z-7303]
Length = 211
Score = 36.6 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ TT + + VV+A + + ++G + A+K+ ++ I AGS DA
Sbjct: 8 LKGTTTVGIACSDAVVLATERRATMGNFIASKTAKKIYQI-DDRIGMTTAGSVGDA 62
>gi|301108459|ref|XP_002903311.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
gi|262097683|gb|EEY55735.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
Length = 247
Score = 36.6 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 76/204 (37%), Gaps = 32/204 (15%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T+L + + VV+AGD ++S G +++ + K+ L ++ G GS D
Sbjct: 38 EPYDFNGGTVLAIAGEDFVVVAGDTRLSTGYSILSRDESKLHELTPTTVL-GCPGSHNDI 96
Query: 69 FTLLERLEKKLEQYPNQ----LLRSSVELAKDWRMDKYLRNL---EAMILIADKTITLVI 121
L L + + Y + + S+ +++ Y R A ++
Sbjct: 97 IQLRGVLSIRAQMYQHDNETSMTSSA--MSQLLMNTLYSRRFFPYYAFCILCGIDE---- 150
Query: 122 TGMG-----DVLEPENGV--MAIGSGGSYALSAARALMSTQ-----------NSAEEIAR 163
G G D + + V A GSGG + L+ ++I +
Sbjct: 151 NGKGVVYTYDAIGSYDRVTRAAQGSGGHLMIPLLDNLVEHDTRTDPKKALTLQETKDIIK 210
Query: 164 KAMSIAADICVYTNHNIVLETLKV 187
A A + +YT ++ + T+K
Sbjct: 211 DAFITAGERDIYTGDSVEILTIKA 234
>gi|332257645|ref|XP_003277915.1| PREDICTED: proteasome subunit beta type-6-like isoform 1 [Nomascus
leucogenys]
gi|332257647|ref|XP_003277916.1| PREDICTED: proteasome subunit beta type-6-like isoform 2 [Nomascus
leucogenys]
gi|332257649|ref|XP_003277917.1| PREDICTED: proteasome subunit beta type-6-like isoform 3 [Nomascus
leucogenys]
Length = 239
Score = 36.6 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG VV+ D + + G + K+ + +I +GS+AD + +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDHIFCCRSGSAADTQAVADA 92
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 93 VTYQLGFHS 101
>gi|91085931|ref|XP_970194.1| PREDICTED: similar to proteasome subunit beta type 5,8 [Tribolium
castaneum]
Length = 279
Score = 36.6 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L G VV+A D + + GQ + +K+ + ++ AG +AD
Sbjct: 68 HGTTTLGFMYKGGVVLAVDSRATGGQFIGSQTMKKIVEI-NDFLLGTLAGGAADCVYWDR 126
Query: 74 RLEKKLEQY 82
L K+ Y
Sbjct: 127 VLAKQCRMY 135
>gi|225192945|dbj|BAH29700.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 36.6 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 32 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 91 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 149
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 150 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 204
Query: 171 -DICVYT 176
DICV T
Sbjct: 205 IDICVIT 211
>gi|224001200|ref|XP_002290272.1| proteasome subunit beta type 5 precursor [Thalassiosira pseudonana
CCMP1335]
gi|220973694|gb|EED92024.1| proteasome subunit beta type 5 precursor [Thalassiosira pseudonana
CCMP1335]
Length = 276
Score = 36.6 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
TT L + +G ++++ D + ++G + +KV + ++ AG +AD
Sbjct: 65 KGTTTLAFKFNGGIIVSVDSRSTMGAYIASGTVKKVIEINP-FLLGTMAGGAADC 118
>gi|195381489|ref|XP_002049481.1| GJ20726 [Drosophila virilis]
gi|194144278|gb|EDW60674.1| GJ20726 [Drosophila virilis]
Length = 251
Score = 36.6 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 42 MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR-SSVELAKDWRMD 100
++ ARK+++L ++I FAG +ADA L+ R + + + R ++VE
Sbjct: 56 IERTARKIKKL-DDHLIMTFAGLTADARILVNRARSEAQSHRLNFERPATVEYIT----- 109
Query: 101 KYLRNL 106
+YL L
Sbjct: 110 RYLAKL 115
>gi|296202288|ref|XP_002748328.1| PREDICTED: proteasome subunit beta type-6-like [Callithrix jacchus]
Length = 239
Score = 36.6 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG VV+ D + + G + K+ + +I +GS+AD + +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDHIFCCRSGSAADTQAVADA 92
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 93 VTYQLGFHS 101
>gi|123296529|emb|CAM26266.1| proteasome (prosome, macropain) subunit beta type 9 (large
multifunctional protease 2) [Homo sapiens]
gi|168983777|emb|CAQ08909.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
gi|168985350|emb|CAQ08498.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
multifunctional peptidase 2) [Homo sapiens]
Length = 131
Score = 36.6 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 19 LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
+ V DG VV+ D +VS G+ V+ K+ L + +I +GS+ADA + + +
Sbjct: 1 MAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHE-HIYCALSGSAADAQAVADMAAYQ 59
Query: 79 LEQYP 83
LE +
Sbjct: 60 LELHG 64
>gi|30584671|gb|AAP36588.1| Homo sapiens proteasome (prosome, macropain) subunit, beta type,
5 [synthetic construct]
Length = 209
Score = 36.6 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 2 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC 56
>gi|330039093|ref|XP_003239785.1| 26S proteasome SU B5 [Cryptomonas paramecium]
gi|327206710|gb|AEA38887.1| 26S proteasome SU B5 [Cryptomonas paramecium]
Length = 234
Score = 36.2 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 4 MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
M + Y +++ H TT L ++IA D + S+G+ + +KV + + A
Sbjct: 13 MSNFFYPIQLSHGTTTLAFICSSGILIAVDSRSSMGKYIGSNKVKKVIEI-NSFFLGTMA 71
Query: 63 GSSADAF-------TLLERLEKKLEQY 82
G +AD F L + E + Q+
Sbjct: 72 GGAADCFFWERNLGCLCDLYEMQNNQH 98
>gi|300709258|ref|XP_002996795.1| hypothetical protein NCER_100054 [Nosema ceranae BRL01]
gi|239606120|gb|EEQ83124.1| hypothetical protein NCER_100054 [Nosema ceranae BRL01]
Length = 229
Score = 36.2 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 15/182 (8%)
Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
+ TT L +VIA D + S G + N KV R+ K +I AG ++D +
Sbjct: 28 IPYKGTTTLAFIFQEGMVIAVDSRASAGSYIASQNVHKVIRINKY-LIGTMAGGASDCYF 86
Query: 71 LLERLEKKLEQYP-NQLLRSSVELAKDWRMDKYLR------NLEAMILIADKTITLV--I 121
+++ + Y R SV A + + + +L +M+ D L+ +
Sbjct: 87 WEKKMGLYAKSYELKNDKRISVSAASMFLSNCVYQYKGRGLSLGSMVCGYDGDKPLIYYV 146
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNH 178
G + + ++GSG + A A E+ +KA+ A Y+
Sbjct: 147 DNDGKRI--SGSLFSVGSGSTIAYGVLNESYKFDLNKDEALELGKKAIWHATHRDAYSGG 204
Query: 179 NI 180
N+
Sbjct: 205 NV 206
>gi|332223024|ref|XP_003260671.1| PREDICTED: proteasome subunit beta type-5-like isoform 2 [Nomascus
leucogenys]
Length = 257
Score = 36.2 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 57 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC 111
>gi|303390486|ref|XP_003073474.1| proteasome subunit beta type-5 [Encephalitozoon intestinalis ATCC
50506]
gi|303302620|gb|ADM12114.1| proteasome subunit beta type-5 [Encephalitozoon intestinalis ATCC
50506]
Length = 229
Score = 36.2 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
K + + TT L +VIA D + + G + +KV + K N++ AG +A
Sbjct: 23 KSFIKPYYGTTTLAFVFKEGMVIAVDSRATSGPYIASQTVKKVIEINK-NLLGTMAGGAA 81
Query: 67 DAF---TLLERLEKKLEQYPN 84
D F L+ K E
Sbjct: 82 DCFYWEKLVGLYAKNYELTNG 102
>gi|225703224|gb|ACO07458.1| Proteasome subunit beta type 7 precursor [Oncorhynchus mykiss]
Length = 243
Score = 36.2 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G+ V K+ + G AG++AD +
Sbjct: 43 GTTIAGVVCKDGVVLGADTRATSGEVVADKMCAKIHYISPNMYCCG-AGTAADTEKTTDL 101
Query: 75 LEKKLEQYPNQLLR 88
L L + R
Sbjct: 102 LSSNLTIFSMNSGR 115
>gi|558526|dbj|BAA06097.1| proteasome subunit X [Homo sapiens]
gi|30582393|gb|AAP35423.1| proteasome (prosome, macropain) subunit, beta type, 5 [Homo
sapiens]
Length = 208
Score = 36.2 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 2 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC 56
>gi|295673398|ref|XP_002797245.1| proteasome component PUP1 [Paracoccidioides brasiliensis Pb01]
gi|226282617|gb|EEH38183.1| proteasome component PUP1 [Paracoccidioides brasiliensis Pb01]
Length = 276
Score = 36.2 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ D VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDAGVVIAADTRATSGPIVADKNCEKLHYITP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 88 MSSNLELH 95
>gi|156085266|ref|XP_001610115.1| proteosome A [Babesia bovis T2Bo]
gi|154797367|gb|EDO06547.1| proteosome A, putative [Babesia bovis]
Length = 266
Score = 36.2 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
TTI+ + +++A D + S G V+ ARK+ R+ N+ +GS+AD+ L
Sbjct: 37 GTTIIAMIYRDGILLAADSRTSSGPIVVNRVARKITRILP-NVFMLRSGSAADSQML 92
>gi|270011211|gb|EFA07659.1| hypothetical protein TcasGA2_TC030625 [Tribolium castaneum]
Length = 273
Score = 36.2 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L G VV+A D + + GQ + +K+ + ++ AG +AD
Sbjct: 65 HGTTTLGFMYKGGVVLAVDSRATGGQFIGSQTMKKIVEI-NDFLLGTLAGGAADCVYWDR 123
Query: 74 RLEKKLEQY 82
L K+ Y
Sbjct: 124 VLAKQCRMY 132
>gi|330799420|ref|XP_003287743.1| proteasome subunit beta type 5 [Dictyostelium purpureum]
gi|325082252|gb|EGC35740.1| proteasome subunit beta type 5 [Dictyostelium purpureum]
Length = 270
Score = 36.2 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 10 AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
++ H TT L G +V+A D + + G V + +KV + ++ AG +AD
Sbjct: 54 PLEFAHGTTTLAFVYSGGIVVAVDSKSTQGPYVASRSVKKVIEITP-TLLGTMAGGAADC 112
>gi|307611968|ref|NP_001182643.1| proteasome (prosome, macropain) subunit, beta type, 6 [Macaca
mulatta]
Length = 239
Score = 36.2 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG VV+ D + + G + K+ + +I +GS+AD + +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDHIFCCRSGSAADTQAVADA 92
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 93 VTYQLGFHS 101
>gi|124516169|gb|EAY57677.1| putative 20S proteasome beta-subunit [Leptospirillum rubarum]
Length = 280
Score = 36.2 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKV 49
H TT+L + VV+A D Q S G V +K+
Sbjct: 56 WHGTTVLALTTRTGVVMAADRQASEGYQVADRAIQKI 92
>gi|54019419|ref|NP_476440.2| proteasome subunit beta type-6 [Rattus norvegicus]
gi|84028245|sp|P28073|PSB6_RAT RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Macropain delta chain; AltName: Full=Multicatalytic
endopeptidase complex delta chain; AltName:
Full=Proteasome chain 5; AltName: Full=Proteasome delta
chain; AltName: Full=Proteasome subunit Y; Flags:
Precursor
gi|37231619|gb|AAH58451.1| Proteasome (prosome, macropain) subunit, beta type 6 [Rattus
norvegicus]
gi|149053199|gb|EDM05016.1| rCG33991, isoform CRA_a [Rattus norvegicus]
Length = 238
Score = 36.2 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG VV+ D + + G + K+ + +I +GS+AD + +
Sbjct: 33 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDHIFCCRSGSAADTQAVADA 91
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 92 VTYQLGFHS 100
>gi|332708591|ref|ZP_08428565.1| hypothetical protein LYNGBM3L_27860 [Lyngbya majuscula 3L]
gi|332352688|gb|EGJ32254.1| hypothetical protein LYNGBM3L_27860 [Lyngbya majuscula 3L]
Length = 172
Score = 36.2 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 14/82 (17%)
Query: 97 WRMDK---YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS 153
W DK + R E ++ + + I+ G +++ N AIG+G YAL+A L
Sbjct: 87 WAKDKDDTFGRRNEYLLAV--EQDIFCIS-DGYLVDKINEFGAIGAGQDYALTA-MYLDK 142
Query: 154 TQNSAEEIARKAMSIAADICVY 175
T +A++IA ++CVY
Sbjct: 143 TP-------EEAVAIANELCVY 157
>gi|225703310|gb|ACO07501.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 36.2 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T+L V + ++A D ++S G ++ ++ K +L +I G +GS D
Sbjct: 27 SPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGSHGDC 85
Query: 69 FTLLERLEKKLEQYP 83
TL + ++ +L+ Y
Sbjct: 86 LTLTKIIDARLKMYK 100
>gi|225703280|gb|ACO07486.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 36.2 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T+L V + ++A D ++S G ++ ++ K +L +I G +G D
Sbjct: 27 SPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFHGDC 85
Query: 69 FTLLERLEKKLEQYP 83
TL E ++ +L+ Y
Sbjct: 86 LTLTEIIDARLKMYK 100
>gi|2851557|sp|P34065|PSB5_CHICK RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain chain 1; AltName: Full=Multicatalytic
endopeptidase complex chain 1; AltName: Full=Proteasome
chain 1; AltName: Full=Proteasome subunit C1; Flags:
Precursor
gi|1906303|dbj|BAA19471.1| proteasome C1 subunit [Gallus gallus]
Length = 256
Score = 36.2 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + VV+A D + + G + +KV + +++ AG +AD +
Sbjct: 53 LHGTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINP-SLLGTMAGGAADC-SFW 110
Query: 73 ERL 75
ERL
Sbjct: 111 ERL 113
>gi|300711728|ref|YP_003737542.1| proteasome beta subunit [Halalkalicoccus jeotgali B3]
gi|299125411|gb|ADJ15750.1| proteasome beta subunit [Halalkalicoccus jeotgali B3]
Length = 247
Score = 36.2 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + +R + VV+A D + SLG V +KV + + AGS + A +L+
Sbjct: 47 GTTTVGLRAEDGVVLATDMRASLGNMVSSKTVQKVEDVHPTGALT-IAGSVSAAQSLIRT 105
Query: 75 LEKKLEQY 82
L ++ Y
Sbjct: 106 LRAEVNLY 113
>gi|293345272|ref|XP_002725989.1| PREDICTED: proteasome subunit beta type 6-like [Rattus norvegicus]
gi|293357141|ref|XP_002729074.1| PREDICTED: proteasome subunit beta type 6-like [Rattus norvegicus]
gi|47169486|tpe|CAE48380.1| TPA: proteasome subunit beta type 6-like [Rattus norvegicus]
gi|149048484|gb|EDM01025.1| rCG63409 [Rattus norvegicus]
Length = 238
Score = 36.2 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG VV+ D + + G + K+ + +I +GS+AD + +
Sbjct: 33 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDHIFCCRSGSAADTQAVADA 91
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 92 VTYQLGFHS 100
>gi|225192954|dbj|BAH29696.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 36.2 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 32 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 91 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 149
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 150 SV----NKVPYLAMGSGDLAALGILEDRFKHDLQLEKAKELVRDAIH-AGIMSDLGSGNN 204
Query: 171 -DICVYT 176
DICV T
Sbjct: 205 IDICVIT 211
>gi|221123833|ref|XP_002155191.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
type, 6 [Hydra magnipapillata]
Length = 234
Score = 36.2 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+ D + + G V K+ + NI +GS+AD + ++
Sbjct: 34 GTTIMAVEFDGGVVVGADSRTTSGSYVANRVTDKLTPV-TDNIFCCRSGSAADTQAIADQ 92
Query: 75 LEKKLEQY 82
+ +L+ +
Sbjct: 93 VRYELDMH 100
>gi|332373358|gb|AEE61820.1| unknown [Dendroctonus ponderosae]
Length = 279
Score = 36.2 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L G VV+A D + + GQ + +K+ + ++ AG +AD
Sbjct: 68 HGTTTLGFMYQGGVVLAVDSRATGGQFIGSQTMKKIVEI-NDFLLGTLAGGAADCVYWDR 126
Query: 74 RLEKKLEQY 82
L K+ Y
Sbjct: 127 VLAKQCRMY 135
>gi|315518859|dbj|BAJ51758.1| proteasome subunit, beta type 10 [Oryzias celebensis]
Length = 261
Score = 36.2 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 27 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 85
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 86 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 144
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 145 SV----NKVPYLAMGSGDLAALGILEDGFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 199
Query: 171 -DICVYT 176
DICV T
Sbjct: 200 IDICVIT 206
>gi|226292223|gb|EEH47643.1| proteasome component PUP1 [Paracoccidioides brasiliensis Pb18]
Length = 276
Score = 36.2 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ D VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDAGVVIAADTRATSGPIVADKNCEKLHYITP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 88 MSSNLELH 95
>gi|225681076|gb|EEH19360.1| proteasome subunit beta type 7 [Paracoccidioides brasiliensis
Pb03]
Length = 276
Score = 36.2 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ D VVIA D + + G V N K+ + I AG++AD
Sbjct: 29 GTTIVGCIFDAGVVIAADTRATSGPIVADKNCEKLHYITP-KIWCAGAGTAADTEFTTAL 87
Query: 75 LEKKLEQY 82
+ LE +
Sbjct: 88 MSSNLELH 95
>gi|90076164|dbj|BAE87762.1| unnamed protein product [Macaca fascicularis]
Length = 263
Score = 36.2 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 57 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAAD 110
>gi|225710552|gb|ACO11122.1| Proteasome subunit beta type-5 precursor [Caligus rogercresseyi]
Length = 278
Score = 36.2 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 19/170 (11%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + +G ++A D + + G V + RK+ + ++A AG +AD T +
Sbjct: 69 HGTTTLGFKYEGGTILAVDSRATSGGYVGSGSVRKIIEVS-DYLLATMAGGAADC-TYWD 126
Query: 74 R---LEKKLEQYPNQLLRSSVELAKDWRMDKYLR------NLEAMILIADKT--ITLVIT 122
R +E +L + N R SV A + R ++ AMI DK +
Sbjct: 127 RVLAMECRLYELRNH-CRISVAAASKLLANNAYRYKGMGLSMGAMIAGYDKRGPELYYVD 185
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
G + ++GSG YA A + A E+ R+A++ A
Sbjct: 186 SEGS--RTPGNLFSVGSGSVYAYGVLDADYRYDLTDEEAYELGRRAIAHA 233
>gi|147899680|ref|NP_001089683.1| hypothetical protein LOC734745 [Xenopus laevis]
gi|76780130|gb|AAI06328.1| MGC130855 protein [Xenopus laevis]
Length = 247
Score = 36.2 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + + G + K+ + I +GS+AD + +
Sbjct: 33 GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPV-HDRIFCCRSGSAADTQAIADA 91
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 92 VTYQLGFHS 100
>gi|302845116|ref|XP_002954097.1| hypothetical protein VOLCADRAFT_109919 [Volvox carteri f.
nagariensis]
gi|300260596|gb|EFJ44814.1| hypothetical protein VOLCADRAFT_109919 [Volvox carteri f.
nagariensis]
Length = 269
Score = 36.2 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + VV+ D + + G TV N K+ + G AG++AD + +
Sbjct: 33 GTTIAGLIFKDGVVLGADTRSTSGSTVADKNCSKIHFITPNIYACG-AGTAADLEHVTDM 91
Query: 75 LEKKLEQYP 83
+ ++ +
Sbjct: 92 VSGQIALHR 100
>gi|291405211|ref|XP_002718873.1| PREDICTED: proteasome beta 6 subunit [Oryctolagus cuniculus]
Length = 239
Score = 36.2 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ DG VV+ D + + G + K+ + +I +GS+AD + +
Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDHIFCCRSGSAADTQAVADA 92
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 93 VTYQLGFHS 101
>gi|73667743|ref|YP_303758.1| proteasome subunit beta [Methanosarcina barkeri str. Fusaro]
gi|121697221|sp|Q46G14|PSB_METBF RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|72394905|gb|AAZ69178.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosarcina barkeri
str. Fusaro]
Length = 211
Score = 36.2 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TT + V +V+A + + ++G + A+KV ++ + AGS DA L
Sbjct: 7 LKGTTTVGVVCTDGIVLASEQRATMGNFIASKTAKKVYQI-DDLVAMTTAGSVGDAQQL 64
>gi|325089205|gb|EGC42515.1| 20S proteasome subunit [Ajellomyces capsulatus H88]
Length = 260
Score = 36.2 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T+++ V+ +G V IA D S G + +++R + + GF G +D
Sbjct: 40 GTSVIAVKFNGGVAIATDNLASYGSLARFTDIKRLRS-FDNSTVIGFGGDVSD 91
>gi|299470780|emb|CBN79826.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 218
Score = 36.2 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T+L + +G VV+A D QV+ + K N K+ L +A AG +D + E +
Sbjct: 3 TLLGIAGEGFVVLAADAQVARSILLYKNNMDKIAHLADNKALA-CAGPQSDCVSFTEYIS 61
Query: 77 KKLEQYPNQ-----LLRSSV-----ELAKDWRMDKYLRNL 106
K + Y +++ ELAK R + L
Sbjct: 62 KNMALYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQL 101
>gi|240273180|gb|EER36702.1| 20S proteasome subunit [Ajellomyces capsulatus H143]
Length = 260
Score = 36.2 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T+++ V+ +G V IA D S G + +++R + + GF G +D
Sbjct: 40 GTSVIAVKFNGGVAIATDNLASYGSLARFTDIKRLRS-FDNSTVIGFGGDVSD 91
>gi|225554387|gb|EEH02686.1| 20S proteasome subunit [Ajellomyces capsulatus G186AR]
Length = 260
Score = 36.2 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T+++ V+ +G V IA D S G + +++R + + GF G +D
Sbjct: 40 GTSVIAVKFNGGVAIATDNLASYGSLARFTDIKRLRS-FDNSTVIGFGGDVSD 91
>gi|225193058|dbj|BAH29668.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 36.2 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 32 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 91 LSSNLTVFSLNSGRNPRVVMAVNILQD-VLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 149
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 150 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 204
Query: 171 -DICVYT 176
DICV T
Sbjct: 205 IDICVIT 211
>gi|242777485|ref|XP_002479043.1| proteasome component Pre2, putative [Talaromyces stipitatus ATCC
10500]
gi|218722662|gb|EED22080.1| proteasome component Pre2, putative [Talaromyces stipitatus ATCC
10500]
Length = 296
Score = 36.2 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Query: 3 VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKV 49
M D H +K+ H TT L R +++A D + + G + +KV
Sbjct: 51 AMTDDHSNPSAPIKLAHGTTTLAFRFQHGIIVATDSRATAGNWIASQTVKKV 102
>gi|212533187|ref|XP_002146750.1| proteasome component Pre2, putative [Penicillium marneffei ATCC
18224]
gi|210072114|gb|EEA26203.1| proteasome component Pre2, putative [Penicillium marneffei ATCC
18224]
Length = 296
Score = 36.2 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Query: 3 VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKV 49
M D H +K+ H TT L R +++A D + + G + +KV
Sbjct: 51 AMTDDHSNPSAPIKLAHGTTTLAFRFQHGIIVATDSRATAGNWIASQTVKKV 102
>gi|148362120|gb|ABQ59647.1| PSMB10 [Salmo salar]
gi|209735636|gb|ACI68687.1| Proteasome subunit beta type-7 precursor [Salmo salar]
gi|223646744|gb|ACN10130.1| Proteasome subunit beta type-7 precursor [Salmo salar]
gi|223672599|gb|ACN12481.1| Proteasome subunit beta type-7 precursor [Salmo salar]
gi|262189355|gb|ACY30373.1| PSMB10 [Salmo salar]
Length = 277
Score = 36.2 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 66/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G+ V K+ + G AG++AD +
Sbjct: 43 GTTIAGVVCKDGVVLGADTRATSGEVVADKMCAKIHYISPNMYCCG-AGTAADTEKTTDM 101
Query: 75 LEKKLE---QYPNQLLRSSVELAKDWRMDKYLR---NLEAMILI----ADKTITLVITGM 124
L L + R V +A + D R + A +++ +
Sbjct: 102 LSSNLTIFSMTSGRNPR--VVMAVNILQDMLFRYRGQIGASLILGGVDCTGNHLYTVGPY 159
Query: 125 GDVLEPENGV--MAIGSGGSYALSAARALMSTQN---SAEEIARKAMS--IAA------- 170
G + + V +A+GSG AL A+E+ R A+ I +
Sbjct: 160 GSI----DNVPYLAMGSGDLAALGILEDRFKPNMELEEAKELVRDAIHSGIMSDLGSGNN 215
Query: 171 -DICVYT 176
DICV T
Sbjct: 216 IDICVIT 222
>gi|225705124|gb|ACO08408.1| Proteasome subunit beta type 7 precursor [Oncorhynchus mykiss]
Length = 277
Score = 36.2 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G+ V K+ + G AG++AD +
Sbjct: 43 GTTIAGVVCKDGVVLGADTRATSGEVVADKMCAKIHYISPNMYCCG-AGTAADTEKTTDL 101
Query: 75 LEKKLEQYPNQLLR 88
L L + R
Sbjct: 102 LSSNLTIFSMNSGR 115
>gi|315518871|dbj|BAJ51766.1| proteasome subunit, beta type 10 [Oryzias matanensis]
Length = 261
Score = 36.2 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 27 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 85
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 86 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 144
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 145 SV----NKVPYLAMGSGDLAALGILEDGFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 199
Query: 171 -DICVYT 176
DICV T
Sbjct: 200 IDICVIT 206
>gi|115712731|ref|XP_790345.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115975664|ref|XP_001195221.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 229
Score = 36.2 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + + VVIA D + + G + + +KV + ++ AG +AD
Sbjct: 68 LHGTTTLGFKFEHGVVIAVDSRATAGPYIASQSVKKVIEINPY-LLGTMAGGAADC 122
>gi|302335278|ref|YP_003800485.1| glycogen/starch/alpha-glucan phosphorylase [Olsenella uli DSM 7084]
gi|301319118|gb|ADK67605.1| glycogen/starch/alpha-glucan phosphorylase [Olsenella uli DSM 7084]
Length = 760
Score = 36.2 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 164 KAMSIAADICVYTNHNIVLETLKVGDE 190
+A+SIA D+C YTNH I+ E L+ +
Sbjct: 297 EAVSIARDVCAYTNHTILAEALETWPK 323
>gi|226468552|emb|CAX69953.1| proteasome (prosome, macropain) subunit, beta type, 6 [Schistosoma
japonicum]
gi|226484696|emb|CAX74257.1| proteasome (prosome, macropain) subunit, beta type, 6 [Schistosoma
japonicum]
Length = 218
Score = 36.2 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT+ DG VVI D + S G V+ K+ +L K +I +GS+AD T+ +
Sbjct: 18 GTTLFACEYDGGVVIGADSRTSSGTYVVNRVTDKLTQLTK-SIYCCRSGSAADTQTVADM 76
Query: 75 LEKKLEQYPNQLLR------SSV---ELAKDWRMDKYLRNLEAMILIA--DKT---ITLV 120
+ +L+ + ++ R ++V ++R D L A I++A D+
Sbjct: 77 VRYQLDFHRLEMNREPTVLEAAVCCQHFCYNYRDD-----LVAGIIVAGWDEQSGGQIYS 131
Query: 121 ITGMGDVLEPENGVMAIGSGGSY 143
I G ++ ++ GSG +Y
Sbjct: 132 IPLGGMLIR--QPIVIGGSGSTY 152
>gi|260940863|ref|XP_002615271.1| hypothetical protein CLUG_04153 [Clavispora lusitaniae ATCC
42720]
gi|238850561|gb|EEQ40025.1| hypothetical protein CLUG_04153 [Clavispora lusitaniae ATCC
42720]
Length = 218
Score = 36.2 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ VR V++ D + + G + + K+ ++ I +GS+AD + +
Sbjct: 19 GTSIMAVRFKDGVILGADSRTTTGTYIANRVSDKLTQI-HDTIYCCRSGSAADTQAVADI 77
Query: 75 LEKKLEQYPNQLL 87
++ L+ Y QL
Sbjct: 78 VKYYLQMYAAQLP 90
>gi|209738272|gb|ACI70005.1| Proteasome subunit beta type-7 precursor [Salmo salar]
Length = 254
Score = 36.2 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 41/192 (21%), Positives = 67/192 (34%), Gaps = 32/192 (16%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G+ V K+ + G AG++AD +
Sbjct: 43 GTTIAGVVCKDGVVLGADTRATSGEVVADKMCAKIHYISPNMYCCG-AGTAADTEKTTDM 101
Query: 75 LEKKLE---QYPNQLLRSSVELAKDWRMD---KYLRNLEAMILI----ADKTITLVITGM 124
L L + R V +A + D +Y + A +++ +
Sbjct: 102 LSSNLTIFSMTSGRNPR--VVMAVNILQDVLFRYRGQIGASLILGGVDCTGNHLYTVGPY 159
Query: 125 GDVLEPENGV--MAIGSGGSYALSAARALMSTQN---SAEEIARKAMS--IAA------- 170
G + + V +A+GSG AL A+E+ R A+ I +
Sbjct: 160 GSI----DNVPYLAMGSGDLAALGILEDRFKPNMELEEAKELVRDAIHSGIMSDLGSGNN 215
Query: 171 -DICVYTNHNIV 181
DICV T
Sbjct: 216 IDICVITKQGWT 227
>gi|119638448|gb|ABL85039.1| proteasome [Brachypodium sylvaticum]
Length = 242
Score = 36.2 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VV+A D + S G V + K+ +L N+ +GS+AD + +
Sbjct: 21 GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKISQL-TDNVYVCRSGSAADTQVISDY 79
Query: 75 LEKKLEQY 82
+ L Q+
Sbjct: 80 VRYFLHQH 87
>gi|1708783|emb|CAA66312.1| LMP7-like protein [Geodia cydonium]
Length = 280
Score = 36.2 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 63/165 (38%), Gaps = 15/165 (9%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 73 HGTTTLAFKFQHGVIVAVDSRATAGSWIASQTVKKVIEINPY-LLGTMAGGAADCAYWER 131
Query: 74 RLEKKLEQYP-NQLLRSSVELAKDWRMDKYLR------NLEAMILIADKT--ITLVITGM 124
+L Y R SV A + R ++ MI DK +
Sbjct: 132 QLAFSCRVYELRNKERISVAAASKILSNMVYRYKGMGLSMGTMICGWDKKGPGLYYVDSD 191
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
G L + + ++GSG +YA + S S A ++ ++A+
Sbjct: 192 GSRLT--HHMFSVGSGSTYAYGVLDSGYSYDLSVEEARDLGKRAI 234
>gi|260798450|ref|XP_002594213.1| hypothetical protein BRAFLDRAFT_65062 [Branchiostoma floridae]
gi|229279446|gb|EEN50224.1| hypothetical protein BRAFLDRAFT_65062 [Branchiostoma floridae]
Length = 135
Score = 36.2 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 70 HGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADC 123
>gi|198285521|gb|ACH85299.1| proteasome (prosome, macropain) subunit beta type 5 [Salmo salar]
Length = 269
Score = 36.2 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 62 LHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 119
Query: 73 ERL 75
ERL
Sbjct: 120 ERL 122
>gi|47228090|emb|CAF97719.1| unnamed protein product [Tetraodon nigroviridis]
Length = 268
Score = 36.2 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 66 LHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 123
Query: 73 ERL 75
ERL
Sbjct: 124 ERL 126
>gi|221220194|gb|ACM08758.1| Proteasome subunit beta type-5 precursor [Salmo salar]
Length = 270
Score = 36.2 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 63 LHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 120
Query: 73 ERL 75
ERL
Sbjct: 121 ERL 123
>gi|162605850|ref|XP_001713440.1| 26S proteasome SU [Guillardia theta]
gi|13794372|gb|AAK39749.1|AF083031_106 26S proteasome SU [Guillardia theta]
Length = 236
Score = 36.2 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
TTI+ + +V+A D + + G+ ++ +K+ +G I G AG+SAD
Sbjct: 34 GTTIIGICIKNHIVLAADTRSTRGKITNDSSCKKIHFIGNNIGICG-AGTSAD 85
>gi|315518877|dbj|BAJ51770.1| proteasome subunit, beta type 10 [Oryzias marmoratus]
Length = 261
Score = 36.2 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 27 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 85
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 86 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 144
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 145 SV----NKVPYLAMGSGDLAALGILEDGFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 199
Query: 171 -DICVYT 176
DICV T
Sbjct: 200 IDICVIT 206
>gi|221219204|gb|ACM08263.1| Proteasome subunit beta type-5 precursor [Salmo salar]
Length = 270
Score = 36.2 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 63 LHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 120
Query: 73 ERL 75
ERL
Sbjct: 121 ERL 123
>gi|225568719|ref|ZP_03777744.1| hypothetical protein CLOHYLEM_04798 [Clostridium hylemonae DSM
15053]
gi|225162218|gb|EEG74837.1| hypothetical protein CLOHYLEM_04798 [Clostridium hylemonae DSM
15053]
Length = 422
Score = 35.8 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 26/125 (20%)
Query: 67 DAFTLLERLEKKLEQY--PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
D + RL +KL+ L ++++++AKD I K L++ G+
Sbjct: 208 DTMSTSYRLYEKLKSADENGALSKAALKVAKD-------------IHEVKKEYLLIMRGI 254
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADIC---VYTNHNI 180
+ L E + GG Y L T SAEE K + I D C +YTN +
Sbjct: 255 SEALNEE-----LEGGGMYVDELLNLLKDTLTLSAEEQ-EKTLIIETD-CRDRIYTNQHY 307
Query: 181 VLETL 185
L ++
Sbjct: 308 ALMSI 312
>gi|195018492|ref|XP_001984791.1| GH16666 [Drosophila grimshawi]
gi|193898273|gb|EDV97139.1| GH16666 [Drosophila grimshawi]
Length = 272
Score = 35.8 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
I+ V VV+ D + + G V N K+ L G AG++AD + +
Sbjct: 42 IVGVIYKDGVVLGADTRATEGPIVSDKNCAKIHYLADNIYCCG-AGTAADTEMTTDLISS 100
Query: 78 KLEQYP 83
+LE +
Sbjct: 101 QLELHR 106
>gi|308321636|gb|ADO27969.1| proteasome subunit beta type-5 [Ictalurus furcatus]
Length = 266
Score = 35.8 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 60 LHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 117
Query: 73 ERL 75
ERL
Sbjct: 118 ERL 120
>gi|302922263|ref|XP_003053429.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734370|gb|EEU47716.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 261
Score = 35.8 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T+++ V+ VV+A D S G + +++R +++ GF+G +D
Sbjct: 40 GTSVIAVKFKDGVVMAADNLASYGSLARFTDVKRLRSFADSSVV-GFSGDISD 91
>gi|219118149|ref|XP_002179855.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408908|gb|EEC48841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 283
Score = 35.8 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
D VK TT L + +G ++++ D + ++G + +KV + ++ AG
Sbjct: 63 ADAGQEVKFAKGTTTLAFKFNGGIIVSVDSRSTMGYYIASGTVKKVIEINP-FLLGTMAG 121
Query: 64 SSADA 68
+AD
Sbjct: 122 GAADC 126
>gi|297619257|ref|YP_003707362.1| proteasome endopeptidase complex subunit beta [Methanococcus
voltae A3]
gi|297378234|gb|ADI36389.1| proteasome endopeptidase complex, beta subunit [Methanococcus
voltae A3]
Length = 215
Score = 35.8 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M +++ +K TT + + VV+A D + ++G + A+K+ + I AG
Sbjct: 1 MSEEYKYMK--GTTTVGIACADGVVLATDKRATMGNLIADKEAKKLYPI-DEYIAMTIAG 57
Query: 64 SSADAFTL 71
S DA +L
Sbjct: 58 SVGDAQSL 65
>gi|300120472|emb|CBK20026.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 35.8 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFT 70
M+ T+ + V+IA D +++ G ++ +R V RL + G AG D T
Sbjct: 1 MNGGTVAAIAGKDYVIIAADTRLTQGYEIL---SRNVSRLHPLTSVCVLGNAGCWTDMTT 57
Query: 71 LLERLEKKLEQYPNQ 85
LL LE +++Y
Sbjct: 58 LLRTLEYDIKEYKYN 72
>gi|300120426|emb|CBK19980.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 35.8 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFT 70
M+ T+ + V+IA D +++ G ++ +R V RL + G AG D T
Sbjct: 1 MNGGTVAAIAGKDYVIIAADTRLTQGYEIL---SRNVSRLHPLTSVCVLGNAGCWTDMTT 57
Query: 71 LLERLEKKLEQYPNQ 85
LL LE +++Y
Sbjct: 58 LLRTLEYDIKEYKYN 72
>gi|209732606|gb|ACI67172.1| Proteasome subunit beta type-5 precursor [Salmo salar]
gi|303661532|gb|ADM16042.1| Proteasome subunit beta type-5 precursor [Salmo salar]
Length = 270
Score = 35.8 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 63 LHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 120
Query: 73 ERL 75
ERL
Sbjct: 121 ERL 123
>gi|301778105|ref|XP_002924515.1| PREDICTED: proteasome subunit beta type-6-like [Ailuropoda
melanoleuca]
Length = 239
Score = 35.8 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ +G VV+ D + + G + K+ + I +GS+AD + +
Sbjct: 34 GTTIMAVQFEGGVVLGADSRTTTGSYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADA 92
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 93 VTYQLGFHS 101
>gi|195998844|ref|XP_002109290.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
gi|190587414|gb|EDV27456.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
Length = 235
Score = 35.8 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
++ TI+ V D ++AGD ++S G + + K+ +L + G G D
Sbjct: 25 DPYTLNGGTIVGVAGDNFAILAGDTRLSEGFMIHSRDTSKIYKLTE-KTFLGTCGFQGDV 83
Query: 69 FTLLERLEKKLEQY 82
TL L +L Y
Sbjct: 84 LTLTRLLNARLTMY 97
>gi|324516623|gb|ADY46583.1| Proteasome subunit beta type-4 [Ascaris suum]
Length = 229
Score = 35.8 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
T+++ + DG V I D VS G+ K +R+ R N++ F G AD L
Sbjct: 13 GTSVVAIAFDGGVAIMTDRVVSYGKMARYKHVSRQYR--VNDNVVVAFGGDHADFQWLQN 70
Query: 74 RLEKK 78
+E++
Sbjct: 71 VIERQ 75
>gi|281352167|gb|EFB27751.1| hypothetical protein PANDA_013817 [Ailuropoda melanoleuca]
Length = 238
Score = 35.8 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ +G VV+ D + + G + K+ + I +GS+AD + +
Sbjct: 34 GTTIMAVQFEGGVVLGADSRTTTGSYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADA 92
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 93 VTYQLGFHS 101
>gi|20302762|gb|AAM18885.1|AF391293_2 unknown [Branchiostoma floridae]
Length = 275
Score = 35.8 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 70 HGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADC 123
>gi|167521337|ref|XP_001745007.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776621|gb|EDQ90240.1| predicted protein [Monosiga brevicollis MX1]
Length = 216
Score = 35.8 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D A + TTI+ V VVI D + + G V K+ ++ NI +GS+
Sbjct: 7 DWVTAEHLTGTTIMAVEFADGVVIGADSRTTTGSYVANRVTDKLTKI-TDNIYCCRSGSA 65
Query: 66 ADAFTLLERLEKKLEQYP 83
AD + + + L+ +
Sbjct: 66 ADTQAIADIVRYYLDLHS 83
>gi|161611764|gb|AAI55951.1| LOC100127332 protein [Xenopus laevis]
Length = 253
Score = 35.8 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 66/166 (39%), Gaps = 15/166 (9%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 47 LHGTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 105
Query: 73 ERLEKKLEQYP-NQLLRSSVELAKDWRMDKYLR------NLEAMILIADKT--ITLVITG 123
L ++ Y R SV A + + ++ MI DK +
Sbjct: 106 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 165
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAM 166
G+ + V ++GSG YA + + + A+E+AR+++
Sbjct: 166 EGNRV--SGSVFSVGSGSMYAYGVLDSGYNYELEVEEAQELARRSI 209
>gi|222479043|ref|YP_002565280.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
gi|302595813|sp|B9LTS6|PSB_HALLT RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|222451945|gb|ACM56210.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
Length = 243
Score = 35.8 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 64/178 (35%), Gaps = 35/178 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + ++ VV+A D + SLG V + +KV + + AGS + A L+
Sbjct: 49 GTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALT-IAGSVSAAQNLIST 107
Query: 75 L--EKKLEQYP--------------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKT-- 116
L E L + LLRS ++ ++ D
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLLRSG-----------AFYIVQPILGGVDDEGS 156
Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAAD 171
I +G E E V GSG YAL T + A+ +A KA+ A +
Sbjct: 157 HIYSIDALGGTTEEEYTV--TGSGSQYALGVLEQEYDDDVTVDEAKTMAAKAIQSAVE 212
>gi|194289415|ref|YP_002005322.1| hydrolase, proteasome hslv type peptidase domain [Cupriavidus
taiwanensis LMG 19424]
gi|193223250|emb|CAQ69255.1| putative hydrolase, proteasome hslV type peptidase domain
[Cupriavidus taiwanensis LMG 19424]
Length = 220
Score = 35.8 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQT 40
TT + VRK V IA D V+ G T
Sbjct: 2 TTCVVVRKGAEVAIAADALVTFGDT 26
>gi|2055299|dbj|BAA19760.1| proteasome subunit Y [Xenopus laevis]
Length = 230
Score = 35.8 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + + G + K+ + I +GS+AD + +
Sbjct: 30 GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPV-HDRIFCCRSGSAADTQAIADA 88
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 89 VTYQLGFHS 97
>gi|29841433|gb|AAP06465.1| similar to XM_027825 proteasome (prosome, macropain) subunit, beta
type 6 in Homo sapiens [Schistosoma japonicum]
Length = 218
Score = 35.8 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT+ DG VVI D + S G V+ K+ +L K +I +GS+AD T+ +
Sbjct: 18 GTTLFACEYDGGVVIGADSRTSSGTYVVNRVTDKLTQLTK-SIYCCRSGSAADTQTVADM 76
Query: 75 LEKKLEQYPNQLLR------SSV---ELAKDWRMDKYLRNLEAMILIA--DKT---ITLV 120
+ +L+ + ++ R ++V ++R D L A I++A D+
Sbjct: 77 VRYQLDFHRLEMNREPTVLEAAVCCQHFCYNYRDD-----LVAGIIVAGWDEQSGGQIYS 131
Query: 121 ITGMGDVLEPENGVMAIGSGGSY 143
I G ++ ++ GSG +Y
Sbjct: 132 IPLGGMLIR--QPIVIGGSGSTY 152
>gi|221091547|ref|XP_002156248.1| PREDICTED: similar to LMP X [Hydra magnipapillata]
Length = 265
Score = 35.8 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ ++ H TT L + V++A D + S G + +KV + ++ AG
Sbjct: 61 TNGDTKIQFHHGTTTLAFKFKHGVIVAVDSRASAGSYIASQTVKKVIEINPY-LLGTMAG 119
Query: 64 SSADA 68
+AD
Sbjct: 120 GAADC 124
>gi|221090686|ref|XP_002162379.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
type 5 [Hydra magnipapillata]
Length = 277
Score = 35.8 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ ++ H TT L + V++A D + S G + +KV + ++ AG
Sbjct: 61 TNGDTKIQFHHGTTTLAFKFKHGVIVAVDSRASAGSYIASQTVKKVIEINPY-LLGTMAG 119
Query: 64 SSADA 68
+AD
Sbjct: 120 GAADC 124
>gi|315518880|dbj|BAJ51772.1| proteasome subunit, beta type 10 [Oryzias marmoratus]
Length = 261
Score = 35.8 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 27 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 85
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 86 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 144
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 145 SV----NKVPYLAMGSGDLAALGILEDGFKHDLELEKAKELVRDAIH-AGIMSDLGSGNN 199
Query: 171 -DICVYT 176
DICV T
Sbjct: 200 IDICVIT 206
>gi|145590322|ref|YP_001152324.1| proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
13514]
gi|302595706|sp|A4WH05|PSB1_PYRAR RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome
core protein PsmB 1; Flags: Precursor
gi|145282090|gb|ABP49672.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
13514]
Length = 202
Score = 35.8 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TT+ V KDG VV+A D +V+ G + K+ ++ ++ A +G AD +L L
Sbjct: 3 TTVGIVVKDG-VVLATDKRVTAGYYIAHKKGEKLWKI-DDHVAATMSGGVADLQNILSFL 60
Query: 76 EKKLEQYPNQLLR 88
+ +Y Q R
Sbjct: 61 TVRAREYKTQFRR 73
>gi|109734432|gb|AAI17734.1| Proteasome (prosome, macropain) subunit, beta type, 11 [Mus
musculus]
gi|109734838|gb|AAI17733.1| Proteasome (prosome, macropain) subunit, beta type, 11 [Mus
musculus]
gi|148704390|gb|EDL36337.1| mCG51940 [Mus musculus]
Length = 302
Score = 35.8 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 58/172 (33%), Gaps = 32/172 (18%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H H TT L R V+ A D + S G V +RKV + + ++ +G+SAD
Sbjct: 42 HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPVHQ-RLLGTTSGTSAD 100
Query: 68 AFTLLE---RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI--------LIA--- 113
T R + E QL S AK L AM+ +A
Sbjct: 101 CATWYRVLRRELRLRELREGQLP-SVAGTAKL---------LAAMMSCYRGLDLCVATAL 150
Query: 114 -----DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ G L+ + ++GSG YA + +E
Sbjct: 151 CGWDHSGPALFYVYSDGTCLQ--GDIFSVGSGSPYAYGVLDRGYHYDMTIQE 200
>gi|73955410|ref|XP_849241.1| PREDICTED: similar to Proteasome subunit beta type 6 precursor
(Proteasome delta chain) (Macropain delta chain)
(Multicatalytic endopeptidase complex delta chain)
(Proteasome subunit Y) [Canis familiaris]
Length = 239
Score = 35.8 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V+ +G VV+ D + + G + K+ + I +GS+AD + +
Sbjct: 34 GTTIMAVQFEGGVVLGADSRTTTGSYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADA 92
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 93 VTYQLGFHS 101
>gi|30424826|ref|NP_780413.1| proteasome subunit beta type-11 precursor [Mus musculus]
gi|81895979|sp|Q8BG41|PSB11_MOUSE RecName: Full=Proteasome subunit beta type-11; AltName:
Full=Proteasome subunit beta-5t; Flags: Precursor
gi|26332132|dbj|BAC29796.1| unnamed protein product [Mus musculus]
gi|26334457|dbj|BAC30929.1| unnamed protein product [Mus musculus]
gi|74183992|dbj|BAE37039.1| unnamed protein product [Mus musculus]
gi|148537363|dbj|BAF63539.1| proteasome subunit beta5t [Mus musculus]
Length = 302
Score = 35.8 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 58/172 (33%), Gaps = 32/172 (18%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H H TT L R V+ A D + S G V +RKV + + ++ +G+SAD
Sbjct: 42 HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPVHQ-RLLGTTSGTSAD 100
Query: 68 AFTLLE---RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI--------LIA--- 113
T R + E QL S AK L AM+ +A
Sbjct: 101 CATWYRVLRRELRLRELREGQLP-SVAGTAKL---------LAAMMSCYRGLDLCVATAL 150
Query: 114 -----DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ G L+ + ++GSG YA + +E
Sbjct: 151 CGWDHSGPALFYVYSDGTCLQ--GDIFSVGSGSPYAYGVLDRGYHYDMTIQE 200
>gi|242019386|ref|XP_002430142.1| proteasome subunit alpha type 7-1, putative [Pediculus humanus
corporis]
gi|212515233|gb|EEB17404.1| proteasome subunit alpha type 7-1, putative [Pediculus humanus
corporis]
Length = 251
Score = 35.8 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 13/74 (17%)
Query: 20 TVRKDGVVVIAGDGQ--VSLGQTVMKANARK------VRR--LGKGNIIAGFAGSSADAF 69
VRK G + GQ V LG V K + K VR+ L +++ FAG +ADA
Sbjct: 28 AVRK-GSTAVGVRGQNCVVLG--VEKKSVAKLQEDRTVRKICLLDDHVVMAFAGLTADAR 84
Query: 70 TLLERLEKKLEQYP 83
L+ R + + + +
Sbjct: 85 ILINRAQIECQSHK 98
>gi|148228778|ref|NP_001081217.1| proteasome subunit Y [Xenopus laevis]
gi|76779604|gb|AAI06526.1| LOC397716 protein [Xenopus laevis]
Length = 233
Score = 35.8 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + + G + K+ + I +GS+AD + +
Sbjct: 33 GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPV-HDRIFCCRSGSAADTQAIADA 91
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 92 VTYQLGFHS 100
>gi|268323699|emb|CBH37287.1| 20S proteasome, beta subunit [uncultured archaeon]
Length = 210
Score = 35.8 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TT + + VV+A + + ++G + A+K+ L I AG DA L+
Sbjct: 9 KGTTTIGLICGESVVLASEKRATMGSFIASKTAKKI-YLVDDRIAMTTAGIVGDAQALVR 67
Query: 74 RLEKKLEQYP 83
+ +L+ Y
Sbjct: 68 IMTVELQLYK 77
>gi|307596440|ref|YP_003902757.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307551641|gb|ADN51706.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 216
Score = 35.8 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIA 59
M +G+++ M TT + + + VV+A D +V+ G + + K+ ++ ++ A
Sbjct: 1 MFTVGNENLNRLMTGTTTVGIVVNDGVVLATDRRVTAGYYIAHRKKGVKIWKI-DNHVAA 59
Query: 60 GFAGSSADAFTLLERLEKKLEQYP 83
+G AD +L+ L QY
Sbjct: 60 TMSGGVADLQKVLDALTATAIQYK 83
>gi|315308144|gb|ADU04475.1| beta-type proteasome 7 subunit [Canis lupus familiaris]
Length = 277
Score = 35.8 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 15 ATTILT-VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TTI V KDG +V+ D + + G V N K+ + G AG++AD +
Sbjct: 43 GTTIAGGVYKDG-IVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQ 100
Query: 74 RLEKKLEQYP---NQLLR 88
+ LE + +L R
Sbjct: 101 LISSNLELHSLSTGRLPR 118
>gi|209875265|ref|XP_002139075.1| proteasome subunit beta type 5 precursor [Cryptosporidium muris
RN66]
gi|209554681|gb|EEA04726.1| proteasome subunit beta type 5 precursor, putative [Cryptosporidium
muris RN66]
Length = 279
Score = 35.8 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TT L G V++A D + + G + + +K+ + ++ AG +AD + E
Sbjct: 67 KGTTTLGFIYQGGVILAVDSRATQGGYIASGSVKKIIEI-NNYLLGTMAGGAADC-SYWE 124
Query: 74 RLEKKL 79
R+ KL
Sbjct: 125 RVLAKL 130
>gi|15920692|ref|NP_376361.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
gi|74574726|sp|Q975D1|PSB2_SULTO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|15621475|dbj|BAB65470.1| 207aa long hypothetical proteasome beta subunit [Sulfolobus
tokodaii str. 7]
Length = 207
Score = 35.8 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 20/166 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + ++ VV+A D + S G V RKV + NI AGS AD + +
Sbjct: 13 GTTTVGIKVKDGVVLAADRRASAGMYVAHKYVRKVLYVAP-NIGITTAGSVADLQFIYDL 71
Query: 75 LEKKLEQYPNQL--------LRS-SVELAKDWRMDKYLRNLEAMIL--IADKTITLVITG 123
L+ Y L +++ + LA KYL + +++ + ++ +
Sbjct: 72 LKNI---YHYNLITGMRPITIKALATYLANMLSFSKYLPYIVQILIGGVDEQPRLYNLDY 128
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
+GD+ E A GSG A+ + A ++AR+A+
Sbjct: 129 VGDITE--EDYTATGSGSVEAIGVIEDEYRPDMTLDEAADLARRAI 172
>gi|256077218|ref|XP_002574904.1| proteasome catalytic subunit 1 (T01 family) [Schistosoma mansoni]
gi|238660121|emb|CAZ31137.1| proteasome catalytic subunit 1 (T01 family) [Schistosoma mansoni]
Length = 225
Score = 35.8 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT+ DG VVI D + S G V+ K+ +L K +I +GS+AD + +
Sbjct: 25 GTTLFACEYDGGVVIGADSRTSSGTYVVNRVTDKLTQLTK-SIYCCRSGSAADTQAVADM 83
Query: 75 LEKKLEQYPNQLLR------SSVE---LAKDWRMDKYLRNLEAMILIA--DKT---ITLV 120
+ +L+ + ++ R ++V ++R D L A I++A D+
Sbjct: 84 VRYQLDFHRLEMNREPTVLEAAVSCKHFCYNYRDD-----LVAGIIVAGWDEELGGQIYS 138
Query: 121 ITGMGDVLEPENGVMAIGSGGSY 143
I G ++ ++ GSG +Y
Sbjct: 139 IPLGGMLIR--QPIVIGGSGSTY 159
>gi|242019368|ref|XP_002430133.1| proteasome subunit alpha type 7-1, putative [Pediculus humanus
corporis]
gi|212515224|gb|EEB17395.1| proteasome subunit alpha type 7-1, putative [Pediculus humanus
corporis]
Length = 251
Score = 35.8 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 13/74 (17%)
Query: 20 TVRKDGVVVIAGDGQ--VSLGQTVMKANARK------VRR--LGKGNIIAGFAGSSADAF 69
VRK G + GQ V LG V K + K VR+ L +++ FAG +ADA
Sbjct: 28 AVRK-GSTAVGVRGQNCVVLG--VEKKSVAKLQEDRTVRKICLLDDHVVMAFAGLTADAR 84
Query: 70 TLLERLEKKLEQYP 83
L+ R + + + +
Sbjct: 85 ILINRAQIECQSHK 98
>gi|301624549|ref|XP_002941563.1| PREDICTED: proteasome subunit beta type-11-like [Xenopus (Silurana)
tropicalis]
Length = 277
Score = 35.8 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L G VV A D + S G V ++RK L +++A +GSSAD
Sbjct: 54 PPPAHGTTTLAFIYSGGVVAATDTRSSAGHLVCSPDSRKA-TLIHSHLLATTSGSSADC 111
>gi|223993127|ref|XP_002286247.1| probable 20S proteasome beta subunit [Thalassiosira pseudonana
CCMP1335]
gi|220977562|gb|EED95888.1| probable 20S proteasome beta subunit [Thalassiosira pseudonana
CCMP1335]
Length = 220
Score = 35.8 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA--FTL 71
H TT L+ G +V+A D + S+G V +KV + + NI+ AG +AD +
Sbjct: 16 HGTTTLSFVFQGGIVVAVDSRASIGNFVGSKTTQKVLPVSR-NILGSMAGGAADCSFWIR 74
Query: 72 LERLEKKLEQ 81
R E K+ +
Sbjct: 75 YLRSEAKIHE 84
>gi|159481070|ref|XP_001698605.1| 20S proteasome beta subunit E, type beta 5 [Chlamydomonas
reinhardtii]
gi|158282345|gb|EDP08098.1| 20S proteasome beta subunit E, type beta 5 [Chlamydomonas
reinhardtii]
Length = 273
Score = 35.8 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG-FAGSSADA 68
H TT L V+IA D + ++G + +KV + + G AG +AD
Sbjct: 58 HGTTTLGFIFQHGVIIAVDSRATMGAYISSQTVKKV--IEINKFLLGTMAGGAADC 111
>gi|156363743|ref|XP_001626200.1| predicted protein [Nematostella vectensis]
gi|156213068|gb|EDO34100.1| predicted protein [Nematostella vectensis]
Length = 249
Score = 35.8 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 66/172 (38%), Gaps = 22/172 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + V++ D + + V N K+ + G AG++AD + +
Sbjct: 16 GTTIAGIVFKDGVILGADTRATEDTIVADKNCSKIHYIAPNIYCCG-AGTAADTEYVTDL 74
Query: 75 LEKKLEQYPNQLLRSS-----VELAKDWRMDKYLRNLEAMILIADKT------ITLVITG 123
+ +++ + R + + + K R+ +Y + A +++ T+ G
Sbjct: 75 ISSQIQLHSLNTGRQARIVTSLRMLKQ-RLFRYQGYISAALVLGGVDFSGPHLHTVYPHG 133
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
D L + +GSG A++ + A+++ R IAA I
Sbjct: 134 STDSL----PYVTMGSGSLAAMAVFESRYRPDMELEEAKQLVRDG--IAAGI 179
>gi|284161559|ref|YP_003400182.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM
5631]
gi|302595818|sp|D2RGT4|PSB_ARCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|284011556|gb|ADB57509.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM
5631]
Length = 215
Score = 35.8 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT + + VV+A + + ++G + A+K+ R+ + AG+ DA L
Sbjct: 10 YKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYRIA-DRVAMTTAGAVGDAQFLA 68
Query: 73 ERLEKKLEQY 82
+ +++ Y
Sbjct: 69 RLISVEIKLY 78
>gi|6755204|ref|NP_035316.1| proteasome subunit beta type-5 [Mus musculus]
gi|187608891|sp|O55234|PSB5_MOUSE RecName: Full=Proteasome subunit beta type-5; AltName:
Full=Macropain epsilon chain; AltName:
Full=Multicatalytic endopeptidase complex epsilon chain;
AltName: Full=Proteasome chain 6; AltName:
Full=Proteasome epsilon chain; AltName: Full=Proteasome
subunit X; Flags: Precursor
gi|5757659|gb|AAD50536.1|AF060091_1 proteasome subunit X [Mus musculus]
gi|2897806|dbj|BAA24916.1| PSMB5 [Mus musculus]
gi|2897809|dbj|BAA24917.1| PSMB5 [Mus musculus]
gi|74228773|dbj|BAE21876.1| unnamed protein product [Mus musculus]
gi|77415527|gb|AAI06145.1| Proteasome (prosome, macropain) subunit, beta type 5 [Mus musculus]
gi|148704392|gb|EDL36339.1| mCG8712, isoform CRA_b [Mus musculus]
Length = 264
Score = 35.8 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 57 LHGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 114
Query: 73 ERL 75
ERL
Sbjct: 115 ERL 117
>gi|90421951|ref|YP_530321.1| FMN-binding [Rhodopseudomonas palustris BisB18]
gi|90103965|gb|ABD86002.1| FMN-binding [Rhodopseudomonas palustris BisB18]
Length = 764
Score = 35.8 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 26/127 (20%)
Query: 17 TILTVRKDG----VVVIAGDGQVS---LGQTVMKANARKVR--RLGKGNIIAGFAGSSAD 67
T++ + G V I V+ +G +++++ + +R RL G +A + D
Sbjct: 138 TVVA--RGGAKPPRVDIVSGATVTVLVIGDSIVRSAIKLIRSNRLADGGPVAAVTTAPPD 195
Query: 68 AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM-GD 126
A +++ + ++ + L D LR L+ + + D +G
Sbjct: 196 AAKIIDMDKSEVRDWQGLLA------------DGALRRLQ--LSVGDVNQAFEKSGNAAA 241
Query: 127 VLEPENG 133
PE+G
Sbjct: 242 AARPEDG 248
>gi|332021182|gb|EGI61567.1| Proteasome subunit beta type-5 [Acromyrmex echinatior]
Length = 286
Score = 35.8 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + G +++A D + + GQ + + +K+ + ++ AG +AD
Sbjct: 73 HGTTTLGFQYQGGIILAVDSRATGGQFIGSSTMKKIVEI-NDYLLGTLAGGAADCVYWDR 131
Query: 74 RLEKKLEQY 82
L ++ Y
Sbjct: 132 VLARQCRMY 140
>gi|300712396|ref|YP_003738210.1| 20S proteasome A and B subunits [Halalkalicoccus jeotgali B3]
gi|299126079|gb|ADJ16418.1| 20S proteasome A and B subunits [Halalkalicoccus jeotgali B3]
Length = 179
Score = 35.8 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 21/141 (14%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
T++ VR VV+ D + + G TV + K+ A AG + T +L+
Sbjct: 3 TVVGVRLADGVVLGADKRATSGSTVRSESVEKLFEFDGPEAGAVAAGETGAIQTFGRKLD 62
Query: 77 KKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVITGM 124
+ Q + L R + ELA + +EA++ D+ I
Sbjct: 63 TAVRQRGTEQGSTIRIDPLSRLASELANE-------TGVEAVVAARDEEGVARLRAIDSA 115
Query: 125 GDVLEPENGVMAIGSGGSYAL 145
G E ++ V A GSG +AL
Sbjct: 116 GG--ELDDDVHAQGSGRQFAL 134
>gi|15126628|gb|AAH12246.1| Proteasome (prosome, macropain) subunit, beta type 5 [Mus musculus]
Length = 264
Score = 35.8 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 57 LHGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 114
Query: 73 ERL 75
ERL
Sbjct: 115 ERL 117
>gi|195470076|ref|XP_002099959.1| GE16434 [Drosophila yakuba]
gi|194187483|gb|EDX01067.1| GE16434 [Drosophila yakuba]
Length = 315
Score = 35.8 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + V++ D + + G V N K+ L G AG++AD +
Sbjct: 48 GTSIVGIIYQDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCG-AGTAADTEMMTLM 106
Query: 75 LEKKLEQYPNQLLR 88
+L+ + R
Sbjct: 107 TSAELDLHQLNTGR 120
>gi|148229628|ref|NP_001080028.1| low molecular mass protein-7 (LMP-7) homolog [Xenopus laevis]
gi|37589390|gb|AAH59335.1| MGC69086 protein [Xenopus laevis]
Length = 271
Score = 35.8 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 66/170 (38%), Gaps = 15/170 (8%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
H TT L + V++A D + S G + A KV + ++ +GS+AD
Sbjct: 63 PWHGTTTLAFKFKHGVIVAVDSRASAGSYIASLKANKVIEINPY-LLGTMSGSAADCQHW 121
Query: 72 LERLEKKLEQYP-NQLLRSSVELAKDWRMDKYLR------NLEAMILIADKT--ITLVIT 122
L K+ Y R SV A + L+ ++ +MI DK +
Sbjct: 122 ERLLAKECRLYQLRNNSRISVSSASKLLCNMMLQYRGSGLSVGSMICGWDKKGPGLYYVD 181
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
G L + + GSG SYA + + EE + R+A+S A
Sbjct: 182 DNGTRL--CGDIFSTGSGNSYAYGVMDSGYRFDLTPEEAYDLGRRAISYA 229
>gi|290559800|gb|EFD93124.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 206
Score = 35.8 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 30/182 (16%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT L + V++A D + + V NA KV + NI AG AD ++
Sbjct: 7 GTTTLGLVYKDGVILAADRRATADHIVANKNAEKVMSISS-NIGVTTAGMVADLQAMVRL 65
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-VITG----MGDVLE 129
+ +L Y +R+ +L D + L A++ +K ++L +I G G E
Sbjct: 66 MRSELTLYE---IRAGSKLD----TDGAVSLLSAVL--FNKRLSLNLIYGEFIIGGYDTE 116
Query: 130 P------------ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS-IAADI--CV 174
P ++ GSGG +AL + EE + A I++ I V
Sbjct: 117 PKLFSIDEAGGQGKDKFTVTGSGGVFALGVLEGDYKDNMTEEEGIKLAYKAISSSIRRDV 176
Query: 175 YT 176
YT
Sbjct: 177 YT 178
>gi|297527490|ref|YP_003669514.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
gi|297256406|gb|ADI32615.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
Length = 210
Score = 35.8 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TT + + VV+A D + + G V +K+ R+ I +G ADA + E+
Sbjct: 12 TTTVGIVVGDYVVLAADKRATAGSLVAHKRVKKIIRI-DDYIAMTISGLVADAEIIAEQA 70
Query: 76 EKKLEQYPNQLLR 88
+Y +L R
Sbjct: 71 RFIARKYKLELGR 83
>gi|195393548|ref|XP_002055416.1| Pros28.1B [Drosophila virilis]
gi|194149926|gb|EDW65617.1| Pros28.1B [Drosophila virilis]
Length = 251
Score = 35.8 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
+T++ +R VV+ + + + ++ +RK++++ + + FAG +ADA L+
Sbjct: 29 KGSTVVGLRTKECVVLGVEKRA-IDSLQIERTSRKIKKIDQHMAMT-FAGLTADARVLVS 86
Query: 74 RLEKKLEQYPNQLLR-SSVELAKDWRMDKYLRNL 106
R + + + + R +SVE +YL L
Sbjct: 87 RAQVEAQSHRLNFDRPASVEYIT-----RYLARL 115
>gi|167998460|ref|XP_001751936.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697034|gb|EDQ83371.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 236
Score = 35.8 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
TT L V++A D S+G ++ + +K+ + ++ AG +AD
Sbjct: 16 KGTTTLAFVFKHGVIVAADSSASMGNSISSQSVKKILEINPY-LLGTMAGGAADC 69
>gi|209734840|gb|ACI68289.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 35.4 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T+L V + V+A D ++S G ++ ++ K +L +I G +G D
Sbjct: 27 SPYSFNGGTVLAVAGEDFAVVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFHGDC 85
Query: 69 FTLLERLEKKLEQYP 83
TL + ++ +L+ Y
Sbjct: 86 LTLTKIIDARLKMYK 100
>gi|62972|emb|CAA40494.1| proteasome C1 subunit [Gallus gallus]
Length = 204
Score = 35.4 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + VV+A D + + G + +KV + +++ AG +AD
Sbjct: 1 LHGTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINP-SLLGTMAGGAADC 55
>gi|315604120|ref|ZP_07879186.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313826|gb|EFU61877.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 381
Score = 35.4 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 35/165 (21%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
I+++R+ V + G G+V L TV+ A + V R ++ AD+ TL E
Sbjct: 92 IMSLREGQEVTLVG-GKVLLDGTVI-ATGKAVTR---DDLDV----EVADSATLFAGFEG 142
Query: 78 KLEQYPNQLLRSSVELAKDWRMDKYLRNLE--AMILIADKTITLVITGMGDV-------- 127
+E Y LAKD LR ++ A+ + D+ ++ITG +
Sbjct: 143 AIEDY----------LAKDGAT--VLRGVDVPALPRVGDRP-IVLITGSAEAREELRALA 189
Query: 128 ---LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
E ++A+ SG AL+A L + A+ ++ KA+ A
Sbjct: 190 RWRAEAAPFIIAVDSGADVALAAHVPLDAVIGDADLMSEKAIRSA 234
>gi|17380265|sp|Q9P992|PSB_METTE RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|790625|gb|AAA91642.1| beta-type proteasome subunit [Methanosarcina thermophila TM-1]
Length = 210
Score = 35.4 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TT + V +V+A + + ++G + A+KV ++ + AGS DA L
Sbjct: 7 LKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQI-DDLVGMTTAGSVGDAQQL 64
>gi|242094726|ref|XP_002437853.1| hypothetical protein SORBIDRAFT_10g003770 [Sorghum bicolor]
gi|241916076|gb|EER89220.1| hypothetical protein SORBIDRAFT_10g003770 [Sorghum bicolor]
Length = 280
Score = 35.4 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TT L D V++A D + S+G + RK+ + ++ AG +AD
Sbjct: 60 KGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADCQFWHR 118
Query: 74 RLEKKLEQY 82
L K +
Sbjct: 119 NLGNKCRLH 127
>gi|21226796|ref|NP_632718.1| proteasome subunit beta [Methanosarcina mazei Go1]
gi|74550648|sp|Q8PZ04|PSB_METMA RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|20905092|gb|AAM30390.1| Proteasome, beta subunit [Methanosarcina mazei Go1]
Length = 210
Score = 35.4 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TT + V +V+A + + ++G + A+KV ++ + AGS DA L
Sbjct: 7 LKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQI-DDLVGMTTAGSVGDAQQL 64
>gi|45361029|ref|NP_989151.1| proteasome beta 6 subunit [Xenopus (Silurana) tropicalis]
gi|38494336|gb|AAH61603.1| proteasome (prosome, macropain) subunit, beta type, 6 [Xenopus
(Silurana) tropicalis]
gi|89266723|emb|CAJ83898.1| proteasome (prosome macropain) subunit beta type 6 [Xenopus
(Silurana) tropicalis]
Length = 233
Score = 35.4 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + + G + K+ + I +GS+AD + +
Sbjct: 33 GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPV-HDRIFCCRSGSAADTQAIADA 91
Query: 75 LEKKLEQYP 83
+ +L +
Sbjct: 92 VTYQLGFHS 100
>gi|253746973|gb|EET01937.1| Proteasome subunit beta type 9 precursor [Giardia intestinalis
ATCC 50581]
Length = 221
Score = 35.4 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ ++ G V+++ D + ++G V+ K+ + I AGS + A L+
Sbjct: 25 GTTIIVMKYAGGVLLSADTRATMGNLVVDRFTPKILPI-TDKIYTCIAGSVSHAQFLVNE 83
Query: 75 LEKKLEQYPNQL 86
+ L L
Sbjct: 84 VRAHLMTQQMDL 95
>gi|46108636|ref|XP_381376.1| hypothetical protein FG01200.1 [Gibberella zeae PH-1]
Length = 261
Score = 35.4 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T+++ V+ VVIA D S G + +++R +++ GF+G +D
Sbjct: 40 GTSVIAVKFKDGVVIAADNLASYGSLARFTDVKRLRPFADSSVV-GFSGDISD 91
>gi|253747271|gb|EET02070.1| Proteasome subunit beta type 1 [Giardia intestinalis ATCC 50581]
Length = 220
Score = 35.4 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TI+ + +IAGD ++S G ++ N RKV + I+ +G AD L++
Sbjct: 21 GGTIIAIAGPDFAIIAGDTRLSEGYNILSRNVRKVFPV-TDKIVYAASGMHADVQRLIKH 79
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
K+E L ++ E+A + ++ R L AM+
Sbjct: 80 --MKIESTDYHL-KTQREMAIE----QFTRLLSAMM 108
>gi|229367758|gb|ACQ58859.1| Proteasome subunit beta type-7 precursor [Anoplopoma fimbria]
Length = 268
Score = 35.4 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 66/185 (35%), Gaps = 28/185 (15%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD E
Sbjct: 40 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYIAPNIYCCG-AGTAADTEKTTEL 98
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 99 LSSNLTIFSLNSGRNPRVVMAVNILQD-TLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 157
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA-----------D 171
V + +A+GSG AL A+E+ R A+ A D
Sbjct: 158 SV--NKTPYLAMGSGDLAALGILEDGYKPDLELDKAKELVRVAIH-AGIMNDLGSGNNID 214
Query: 172 ICVYT 176
ICV T
Sbjct: 215 ICVIT 219
>gi|194038905|ref|XP_001924480.1| PREDICTED: proteasome subunit beta type-5 [Sus scrofa]
Length = 263
Score = 35.4 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 57 LHGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 114
Query: 73 ERL 75
ERL
Sbjct: 115 ERL 117
>gi|308162461|gb|EFO64857.1| Proteasome subunit beta type 9 precursor [Giardia lamblia P15]
Length = 221
Score = 35.4 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ ++ V+++ D + ++G V+ KV + I AGS + A L+
Sbjct: 25 GTTIIVMKYSNGVLLSADTRATMGNLVVDRFIPKVLPI-TDKIYTCIAGSVSHAQFLVNE 83
Query: 75 LEKKLEQYPNQL 86
+ L L
Sbjct: 84 VRAHLMTQQMDL 95
>gi|159113877|ref|XP_001707164.1| Proteasome subunit beta type 9 precursor [Giardia lamblia ATCC
50803]
gi|157435267|gb|EDO79490.1| Proteasome subunit beta type 9 precursor [Giardia lamblia ATCC
50803]
Length = 221
Score = 35.4 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ ++ V+++ D + ++G V+ KV + I AGS + A L+
Sbjct: 25 GTTIIVMKYSNGVLLSADTRATMGNLVVDRFIPKVLPI-TDKIYTCIAGSVSHAQFLVNE 83
Query: 75 LEKKLEQYPNQL 86
+ L L
Sbjct: 84 VRAHLMTQQMDL 95
>gi|302672727|ref|XP_003026051.1| hypothetical protein SCHCODRAFT_86336 [Schizophyllum commune H4-8]
gi|300099731|gb|EFI91148.1| hypothetical protein SCHCODRAFT_86336 [Schizophyllum commune H4-8]
Length = 274
Score = 35.4 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ +V+ D + + G V N K+ + G AG++AD
Sbjct: 38 GTTIVGCVYKDGIVLGADTRATAGPIVADKNCEKIHYIASNIRCCG-AGTAADTEFTTNL 96
Query: 75 LEKKLEQY 82
+ +E +
Sbjct: 97 IASNVEMH 104
>gi|294495429|ref|YP_003541922.1| proteasome endopeptidase complex, beta component
[Methanohalophilus mahii DSM 5219]
gi|302595753|sp|D5EAS6|PSB_METMS RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|292666428|gb|ADE36277.1| proteasome endopeptidase complex, beta component
[Methanohalophilus mahii DSM 5219]
Length = 210
Score = 35.4 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TT + + VV+A + + ++G + A+K+ ++ + AGS DA L+
Sbjct: 7 LKGTTTVGIVCSDGVVLATEKRATMGNFIASKTAKKIYQI-DDLVGMTTAGSVGDAQQLV 65
Query: 73 ERL--EKKL 79
+ E KL
Sbjct: 66 RMISVESKL 74
>gi|218884589|ref|YP_002428971.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|302595704|sp|B8D673|PSB1_DESK1 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|218766205|gb|ACL11604.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
Length = 202
Score = 35.4 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 17 TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE--R 74
T + ++ VV+A + +++ V+ NARK+ + +I GFAG D L++ R
Sbjct: 9 TAIGLKTSEGVVLASEKRLTYDGFVLSRNARKIHMITN-HIGVGFAGLMGDVNFLVKVLR 67
Query: 75 LEKK-LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI--LIA---DKT--ITLVITGMGD 126
LE K E + +++ LAK + Y L M+ ++ D+ ++ +G
Sbjct: 68 LEAKNYELQHGREIKTR-SLAKLLSVILYSYKLAPMLTEVVVGGYDEEGPSLYILDPVGS 126
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
V+E +A+GSG AL + AEE+A A+
Sbjct: 127 VIE--EKYVAVGSGAQLALGYIEPRYNPGLGLKEAEELAVNAVK 168
>gi|51468069|ref|NP_001003889.1| proteasome subunit beta type-1 [Danio rerio]
gi|49619079|gb|AAT68124.1| proteasome beta-subunit C5 [Danio rerio]
gi|55715844|gb|AAH85580.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Danio rerio]
gi|182891728|gb|AAI65077.1| Psmb1 protein [Danio rerio]
Length = 237
Score = 35.4 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T+L V + ++A D ++S G ++ ++ K +L ++ G +G D
Sbjct: 27 SPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVL-GCSGFHGDC 85
Query: 69 FTLLERLEKKLEQYP 83
TL + +E +L+ Y
Sbjct: 86 LTLTKIIEARLKMYK 100
>gi|225714818|gb|ACO13255.1| Proteasome subunit beta type-6 precursor [Esox lucius]
Length = 231
Score = 35.4 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 17/170 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V DG VVI D + + G + K+ + +I GS+AD + +
Sbjct: 31 GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPI-HDHIFCCRPGSAADTQAVADA 89
Query: 75 LEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA--DKT---ITLVITGM 124
+ +L + + L++++ L K +Y L A I++A DK +
Sbjct: 90 VTYQLGFHSIELDEPPLVQTAANLFKQ-MCYRYREELMAGIIVAGWDKRKGGQVYTVPMG 148
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
G ++ V GSG SY + + EE +A+++A +
Sbjct: 149 GMIVR--QPVSVGGSGSSYIYGFMDSNYKPGMTKEECLHFCTQALTLAME 196
>gi|62897947|dbj|BAD96913.1| proteasome beta 1 subunit variant [Homo sapiens]
Length = 241
Score = 35.4 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ TIL + + ++A D ++S G ++ ++ K RL + G +G D
Sbjct: 31 SPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYRL-TDKTVIGCSGFHGDC 89
Query: 69 FTLLERLEKKLEQYPNQLLRS 89
TL + +E +L+ Y + ++
Sbjct: 90 LTLTKIIEARLKMYKHSNNKA 110
>gi|225193025|dbj|BAH29646.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 35.4 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 30/186 (16%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 32 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 91 LSSNLTVFSLNSGRNPRVVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 149
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMS--IAA-------- 170
V N V +A+GSG AL A+E+ R A+ I +
Sbjct: 150 SV----NKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHVGIMSDLGSGNNI 205
Query: 171 DICVYT 176
DICV T
Sbjct: 206 DICVIT 211
>gi|45184652|ref|NP_982370.1| AAL172Cp [Ashbya gossypii ATCC 10895]
gi|44979998|gb|AAS50194.1| AAL172Cp [Ashbya gossypii ATCC 10895]
Length = 215
Score = 35.4 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V+ V++ D + + G + K+ R+ I +GS+AD + +
Sbjct: 19 GTSIMAVKFRDGVILGADSRTTTGTYIANRVTDKLTRV-HDRIWCCRSGSAADTQAVADM 77
Query: 75 LEKKLEQY 82
++ LE Y
Sbjct: 78 VQHYLELY 85
>gi|116751178|ref|YP_847865.1| hypothetical protein Sfum_3761 [Syntrophobacter fumaroxidans MPOB]
gi|116700242|gb|ABK19430.1| hypothetical protein Sfum_3761 [Syntrophobacter fumaroxidans MPOB]
Length = 858
Score = 35.4 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 55 GNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD 114
G +++ F+ + DA +L R +KLE Q R ++ A WR YLR LE++ D
Sbjct: 267 GRVVSSFSDTIRDAGQMLGRASQKLE---GQFQRDAI--AVHWR---YLRALESLAAPLD 318
>gi|291221879|ref|XP_002730946.1| PREDICTED: proteasome beta 5 subunit-like [Saccoglossus
kowalevskii]
Length = 277
Score = 35.4 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 6 DKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
D ++ H TT L + V++A D + + G + +KV + ++ AG
Sbjct: 61 DSDVKIRFHHGTTTLAFKFQHGVIVAVDSRATAGPFIASQTVKKVIEINPY-LLGTMAGG 119
Query: 65 SADA 68
+AD
Sbjct: 120 AADC 123
>gi|156836888|ref|XP_001642484.1| hypothetical protein Kpol_322p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156113019|gb|EDO14626.1| hypothetical protein Kpol_322p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 195
Score = 35.4 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
IL ++ V++A V+ G +++K K R L K +I+ F G + D E ++
Sbjct: 4 ILGIKVRDSVILATSKAVTRGISILKDTDDKSRELSK-HILMSFTGEAGDTVQFAEYIQA 62
Query: 78 KLEQY----PNQLLRSSV------ELAKDWRMDK 101
++ Y +L +V ELAK R K
Sbjct: 63 NIQLYSIRENYELTPHAVSSFVRKELAKSLRSRK 96
>gi|149744029|ref|XP_001499422.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit, beta
type, 1 [Equus caballus]
Length = 241
Score = 35.4 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ TIL + + ++A D ++S G ++ ++ K +L + G +G D
Sbjct: 31 SPYAFNGGTILAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYKL-TDKTVIGCSGFHGDC 89
Query: 69 FTLLERLEKKLEQYPNQLLRS 89
TL + +E +L+ Y + ++
Sbjct: 90 LTLTKIIEARLKMYKHSNNKA 110
>gi|255527635|ref|ZP_05394496.1| transcriptional regulator, Crp/Fnr family [Clostridium
carboxidivorans P7]
gi|296185313|ref|ZP_06853723.1| cyclic nucleotide-binding domain protein [Clostridium
carboxidivorans P7]
gi|255508677|gb|EET85056.1| transcriptional regulator, Crp/Fnr family [Clostridium
carboxidivorans P7]
gi|296050147|gb|EFG89571.1| cyclic nucleotide-binding domain protein [Clostridium
carboxidivorans P7]
Length = 230
Score = 35.4 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Query: 18 ILT-VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK 54
IL +KD + ++AGD Q++ +T++ + ARK+RRL +
Sbjct: 104 ILCFYKKDLLEIMAGDFQLT--RTIINSMARKIRRLYR 139
>gi|213410533|ref|XP_002176036.1| proteasome subunit beta type-5 [Schizosaccharomyces japonicus
yFS275]
gi|212004083|gb|EEB09743.1| proteasome subunit beta type-5 [Schizosaccharomyces japonicus
yFS275]
Length = 274
Score = 35.4 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R +V+ D + S G V +KV + ++ AG +AD
Sbjct: 60 HGTTTLAFRYKHGIVVCVDSRASAGPLVASQTVKKVIEINPY-LLGTMAGGAADC 113
>gi|148699224|gb|EDL31171.1| mCG118255 [Mus musculus]
Length = 219
Score = 35.4 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 57 LHGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC 111
>gi|254571735|ref|XP_002492977.1| Beta 1 subunit of the 20S proteasome, responsible for cleavage
after acidic residues in peptides [Pichia pastoris
GS115]
gi|238032775|emb|CAY70798.1| Beta 1 subunit of the 20S proteasome, responsible for cleavage
after acidic residues in peptides [Pichia pastoris
GS115]
gi|328353009|emb|CCA39407.1| 20S proteasome subunit beta 1 [Pichia pastoris CBS 7435]
Length = 216
Score = 35.4 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V+ DG V++ D + + G + K+ ++ G + +GS+AD + +
Sbjct: 19 GTSIMAVKFDGGVILGADSRTTTGAYIANRVTDKLTQV-HGTVWCCRSGSAADTQAVADI 77
Query: 75 LEKKLEQYPNQ 85
++ LE Y Q
Sbjct: 78 VKYHLELYEAQ 88
>gi|213407092|ref|XP_002174317.1| proteasome component PRE3 [Schizosaccharomyces japonicus yFS275]
gi|212002364|gb|EEB08024.1| proteasome component PRE3 [Schizosaccharomyces japonicus yFS275]
Length = 229
Score = 35.4 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI +R V++A D + ++G + K+ +L + I +GS+AD + +
Sbjct: 24 GTTITALRFQEGVILAADSRTTMGAYIANRVTDKLTQLSE-KIWCCRSGSAADTQAVADI 82
Query: 75 LEKKLEQYP 83
L+ L QY
Sbjct: 83 LKYYLSQYR 91
>gi|169146058|emb|CAQ14651.1| proteasome (prosome, macropain) subunit, beta type, 5 [Danio rerio]
Length = 269
Score = 35.4 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 63 LHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 120
Query: 73 ERL 75
ERL
Sbjct: 121 ERL 123
>gi|156086830|ref|XP_001610822.1| proteasome epsilon subunit [Babesia bovis T2Bo]
gi|154798075|gb|EDO07254.1| proteasome epsilon subunit , putative [Babesia bovis]
Length = 268
Score = 35.4 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TT L + V++A D + S+G + N KV + ++ AG +AD T E
Sbjct: 55 KGTTTLGFVFNKGVILAVDSRASMGSIIATQNISKVIEI-NSYLLGTMAGGAADC-TYWE 112
Query: 74 RLEKKL 79
R KL
Sbjct: 113 RHVAKL 118
>gi|20092669|ref|NP_618744.1| multicatalytic endopeptidase complex, subunit beta
[Methanosarcina acetivorans C2A]
gi|74551014|sp|Q8TJB5|PSB_METAC RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|19917953|gb|AAM07224.1| multicatalytic endopeptidase complex, subunit beta
[Methanosarcina acetivorans C2A]
Length = 210
Score = 35.4 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
+ TT + V +V+A + + ++G + A+KV ++ + AGS DA L
Sbjct: 7 LKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQI-DDLVGMTTAGSVGDAQQL 64
>gi|5833459|gb|AAD53518.1|AF155578_1 proteasome subunit beta 5 [Danio rerio]
Length = 255
Score = 35.4 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 49 LHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 106
Query: 73 ERL 75
ERL
Sbjct: 107 ERL 109
>gi|327401050|ref|YP_004341889.1| proteasome endopeptidase complex subunit beta [Archaeoglobus
veneficus SNP6]
gi|327316558|gb|AEA47174.1| proteasome endopeptidase complex, beta subunit [Archaeoglobus
veneficus SNP6]
Length = 214
Score = 35.4 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 65/170 (38%), Gaps = 15/170 (8%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ TT + + +V+A + + ++G + A+K+ ++ + AGS DA
Sbjct: 5 QDMVFKGTTTVGLICKDGIVLATEKRATIGNYIASRRAKKIYQVA-DRVAMTTAGSVGDA 63
Query: 69 FTL-------LERLEKKLEQYPNQLLRS-SVELAKDWRMDKYLRNLEAMIL-IADKT--I 117
L E + E+ P +++ + L+ +Y +++ DK
Sbjct: 64 QFLARLVKVEASLYETRKEEKPT--VKAIATMLSNLLNSSRYFPYFVQLLIGGVDKRGPS 121
Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
I +G +E E ++A GSG A + + +E A+
Sbjct: 122 MFSIDPIGGAIE-ETDIVATGSGSPTAYGVLEDRYYPEITTQEGVELAIR 170
>gi|207724136|ref|YP_002254534.1| peptidase t1a (partial sequence n terminus) protein [Ralstonia
solanacearum MolK2]
gi|206589345|emb|CAQ36307.1| putative peptidase t1a (partial sequence n terminus) protein
[Ralstonia solanacearum MolK2]
Length = 39
Score = 35.4 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQT 40
TT + V+K G V IA D V+ G T
Sbjct: 2 TTCVVVKKGGEVAIAADSLVTFGDT 26
>gi|299116096|emb|CBN74512.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 286
Score = 35.4 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 5 GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
D +K TT L + G ++++ D + ++G + +KV + ++ AG
Sbjct: 57 TDHAQDIKFAKGTTTLAFKFQGGIIVSVDSRSTMGPYIASGTVKKVIEINPY-LLGTMAG 115
Query: 64 SSADA 68
+AD
Sbjct: 116 GAADC 120
>gi|11498092|ref|NP_069317.1| proteasome, subunit beta (psmB) [Archaeoglobus fulgidus DSM 4304]
gi|17380266|sp|Q9P996|PSB_ARCFU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2650155|gb|AAB90757.1| proteasome, subunit beta (psmB) [Archaeoglobus fulgidus DSM 4304]
Length = 213
Score = 35.4 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL- 71
TT + + VV+A + + ++G + A+K+ ++ + AGS DA L
Sbjct: 9 YKGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIA-DRMAMTTAGSVGDAQFLA 67
Query: 72 ------LERLEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTITLVI 121
E + E+ P +R+ L + +R YL L + ++ I
Sbjct: 68 RIIKIEANLYEIRRERKPT--VRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSI 125
Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
+G +E E ++A GSG A ++ + + E +A+ +A
Sbjct: 126 DPIGGAIE-EKDIVATGSGSLTAY----GVLEDRFTPEIGVDEAVELA 168
>gi|157423071|gb|AAI53590.1| Psmb5 protein [Danio rerio]
Length = 269
Score = 35.4 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 63 LHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 120
Query: 73 ERL 75
ERL
Sbjct: 121 ERL 123
>gi|21465649|pdb|1IRU|H Chain H, Crystal Structure Of The Mammalian 20s Proteasome At
2.75 A Resolution
gi|21465663|pdb|1IRU|V Chain V, Crystal Structure Of The Mammalian 20s Proteasome At
2.75 A Resolution
Length = 205
Score = 35.4 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TTI+ V+ DG VV+ D + + G + K+ + I +GS+AD + + +
Sbjct: 1 TTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPI-HDRIFCCRSGSAADTQAVADAV 59
Query: 76 EKKLEQYP 83
+L +
Sbjct: 60 TYQLGFHS 67
>gi|288931294|ref|YP_003435354.1| proteasome endopeptidase complex subunit beta [Ferroglobus placidus
DSM 10642]
gi|302595823|sp|D3RX66|PSB_FERPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288893542|gb|ADC65079.1| proteasome endopeptidase complex, beta subunit [Ferroglobus
placidus DSM 10642]
Length = 210
Score = 35.4 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 63/171 (36%), Gaps = 25/171 (14%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
TT + + VV+A + + ++G + A+K+ ++ I AGS DA
Sbjct: 7 FKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYKI-TDRIAMTTAGSVGDA---- 61
Query: 73 ERLEKKLEQYPNQL----------LRSSVELAKDW----RMDKYLRNLEAMILIADKT-- 116
+ +L + L +++ L + R YL L +I DKT
Sbjct: 62 -QFLARLIKVETNLYTIRKEEEPTVKAVATLVSNLLNSVRYFPYLVQL--LIGGVDKTGA 118
Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
I +G +E E ++A GSG A + +E A+
Sbjct: 119 KIYSIDPIGGAIE-EIDIVATGSGSPMAYGVLEDNYRKDINVDEAVELAIR 168
>gi|47217169|emb|CAG11005.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 35.4 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 4 MGDKHY---------AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK 54
M D HY + T+L V D ++A D ++S G ++ ++ K +L
Sbjct: 13 MTDYHYSGRAEHRFSPYTFNGGTVLAVAGDDFAIVASDTRLSEGYSIHSRDSPKCYKLTD 72
Query: 55 GNIIAGFAGSSADAFTLLERLEKKLEQYP 83
+I G +G D TL + ++ +L+ Y
Sbjct: 73 TTVI-GCSGFHGDCLTLTKIIDARLKMYK 100
>gi|195431433|ref|XP_002063746.1| GK15836 [Drosophila willistoni]
gi|194159831|gb|EDW74732.1| GK15836 [Drosophila willistoni]
Length = 283
Score = 35.1 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + G V++A D + + GQ + +KV + ++ AG +AD
Sbjct: 72 HGTTTLGFKYQGGVILAVDSRATGGQYIGSQTMKKVVEI-NQFLLGTLAGGAADCVYWDR 130
Query: 74 RLEKKLEQY 82
L K+ +
Sbjct: 131 VLAKECRMH 139
>gi|47216875|emb|CAG11682.1| unnamed protein product [Tetraodon nigroviridis]
Length = 275
Score = 35.1 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + G+ V K+ + G AG++AD +
Sbjct: 41 GTTIAGVVFKDGVVLGADTRATSGEVVADKMCAKIHHIAPNIYCCG-AGTAADTEKTTDL 99
Query: 75 LEKKLEQYPNQLLR 88
L + + R
Sbjct: 100 LSSNMTIFSLNSGR 113
>gi|164657003|ref|XP_001729628.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
gi|159103521|gb|EDP42414.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
Length = 257
Score = 35.1 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFA 62
G + + +I+ + D VIAGD + S G + KV RL +A GFA
Sbjct: 4 GHQFSPYTSNGGSIMAIHGDDYCVIAGDTRQSEGYNIQTRYKPKVFRLTDKATLATNGFA 63
Query: 63 GSSADAFTLLERLEKKLEQYP 83
ADA L+ R++ +LE Y
Sbjct: 64 ---ADAEALVARVKTRLEMYQ 81
>gi|50878269|ref|NP_571226.1| proteasome subunit beta type-5 [Danio rerio]
gi|48734690|gb|AAH71478.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Danio rerio]
Length = 269
Score = 35.1 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 63 LHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 120
Query: 73 ERL 75
ERL
Sbjct: 121 ERL 123
>gi|73535606|pdb|1YA7|H Chain H, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535607|pdb|1YA7|I Chain I, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535608|pdb|1YA7|J Chain J, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535609|pdb|1YA7|K Chain K, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535610|pdb|1YA7|L Chain L, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535611|pdb|1YA7|M Chain M, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535612|pdb|1YA7|N Chain N, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535645|pdb|1YAR|H Chain H, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535646|pdb|1YAR|I Chain I, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535647|pdb|1YAR|J Chain J, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535648|pdb|1YAR|K Chain K, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535649|pdb|1YAR|L Chain L, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535650|pdb|1YAR|M Chain M, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535651|pdb|1YAR|N Chain N, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535666|pdb|1YAU|H Chain H, Structure Of Archeabacterial 20s Proteasome- Pa26
Complex
gi|73535667|pdb|1YAU|I Chain I, Structure Of Archeabacterial 20s Proteasome- Pa26
Complex
gi|73535668|pdb|1YAU|J Chain J, Structure Of Archeabacterial 20s Proteasome- Pa26
Complex
gi|73535669|pdb|1YAU|K Chain K, Structure Of Archeabacterial 20s Proteasome- Pa26
Complex
gi|73535670|pdb|1YAU|L Chain L, Structure Of Archeabacterial 20s Proteasome- Pa26
Complex
gi|73535671|pdb|1YAU|M Chain M, Structure Of Archeabacterial 20s Proteasome- Pa26
Complex
gi|73535672|pdb|1YAU|N Chain N, Structure Of Archeabacterial 20s Proteasome- Pa26
Complex
gi|282403716|pdb|3IPM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403717|pdb|3IPM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403718|pdb|3IPM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403719|pdb|3IPM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403720|pdb|3IPM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403721|pdb|3IPM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403722|pdb|3IPM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
Length = 217
Score = 35.1 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
TT + + V++A + +V++ +M N +K+ ++ G IAG G DA L+
Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVG---DAQVLV 64
Query: 73 ERLEKKLEQYPNQLLR 88
++ +LE Y L R
Sbjct: 65 RYMKAELELYR--LQR 78
>gi|16081708|ref|NP_394085.1| proteasome, beta chain [Thermoplasma acidophilum DSM 1728]
gi|130867|sp|P28061|PSB_THEAC RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|1633360|pdb|1PMA|B Chain B, Proteasome From Thermoplasma Acidophilum
gi|1633374|pdb|1PMA|P Chain P, Proteasome From Thermoplasma Acidophilum
gi|1633375|pdb|1PMA|Q Chain Q, Proteasome From Thermoplasma Acidophilum
gi|1633376|pdb|1PMA|R Chain R, Proteasome From Thermoplasma Acidophilum
gi|1633377|pdb|1PMA|S Chain S, Proteasome From Thermoplasma Acidophilum
gi|1633378|pdb|1PMA|T Chain T, Proteasome From Thermoplasma Acidophilum
gi|1633379|pdb|1PMA|U Chain U, Proteasome From Thermoplasma Acidophilum
gi|1633380|pdb|1PMA|V Chain V, Proteasome From Thermoplasma Acidophilum
gi|1633381|pdb|1PMA|W Chain W, Proteasome From Thermoplasma Acidophilum
gi|1633382|pdb|1PMA|X Chain X, Proteasome From Thermoplasma Acidophilum
gi|1633383|pdb|1PMA|Y Chain Y, Proteasome From Thermoplasma Acidophilum
gi|1633384|pdb|1PMA|Z Chain Z, Proteasome From Thermoplasma Acidophilum
gi|1633385|pdb|1PMA|1 Chain 1, Proteasome From Thermoplasma Acidophilum
gi|1633386|pdb|1PMA|2 Chain 2, Proteasome From Thermoplasma Acidophilum
gi|154680|gb|AAA72102.1| proteasome beta-subunit [Thermoplasma acidophilum]
gi|10639779|emb|CAC11751.1| proteasome, beta chain [Thermoplasma acidophilum]
Length = 211
Score = 35.1 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
TT + + V++A + +V++ +M N +K+ ++ G IAG G DA L+
Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVG---DAQVLV 64
Query: 73 ERLEKKLEQYPNQLLR 88
++ +LE Y L R
Sbjct: 65 RYMKAELELYR--LQR 78
>gi|290986448|ref|XP_002675936.1| predicted protein [Naegleria gruberi]
gi|284089535|gb|EFC43192.1| predicted protein [Naegleria gruberi]
Length = 223
Score = 35.1 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 45/209 (21%), Positives = 79/209 (37%), Gaps = 50/209 (23%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT L + V++A D ++SLG ++ + K+ +L +IA AG +DA TL +
Sbjct: 20 GTT-LAIPGPDYVIVAADTRMSLGYSIQTRKSTKLCKLTDKCVIAS-AGMQSDAATLHKV 77
Query: 75 LEKKLEQYPNQLLR--SSVELAKDWRMDKYLRNLEAMI------------LIADKTITLV 120
L+ +L +Y +Q + S V + + L M+ L+A
Sbjct: 78 LKMRLVEYEHQHGKPMSVVAVGQM---------LSNMLYNRRFFPYYTFNLVAGLDT--- 125
Query: 121 ITGMG-----DVLEPENGVMAIGSGGS-----------YALSAARALMSTQNSAEE---I 161
G G D + V G A + +T + E+ I
Sbjct: 126 -DGKGIVFSYDAIGSYQSVEVGSQGSGQTLIQPLLDNQVAFKNHLLVPNTDLTLEQSLSI 184
Query: 162 ARKAMSIAADICVYTNHNIVLETLKVGDE 190
+ A + A + +YT + +E L + E
Sbjct: 185 VKDAFTSAGERDIYTGDS--VEILIITKE 211
>gi|195378434|ref|XP_002047989.1| GJ11606 [Drosophila virilis]
gi|194155147|gb|EDW70331.1| GJ11606 [Drosophila virilis]
Length = 270
Score = 35.1 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
I+ + V++ D + + G V N K+ L K G AG++AD + +
Sbjct: 40 IVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEMTTDLISS 98
Query: 78 KLEQYPNQLLR 88
+LE + R
Sbjct: 99 QLELHRLNTER 109
>gi|225706814|gb|ACO09253.1| Proteasome subunit beta type 5 precursor [Osmerus mordax]
Length = 221
Score = 35.1 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 16 LHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 73
Query: 73 ERL 75
ERL
Sbjct: 74 ERL 76
>gi|158186|gb|AAA62768.1| proteasome beta-subunit [Drosophila melanogaster]
Length = 249
Score = 35.1 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 18/81 (22%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANA------RKVRRL--GKGNIIAGFAGSS 65
+T + VR VV+ V K + RKVR++ +++ FAG +
Sbjct: 30 KGSTAVGVRGANCVVLG----------VEKKSVAQLQEDRKVRKICMLDNHVVMAFAGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQL 86
ADA ++ R + + + + +
Sbjct: 80 ADARIMINRAQVECQSHRLNV 100
>gi|325192589|emb|CCA27017.1| proteasome subunit beta type5 putative [Albugo laibachii Nc14]
Length = 294
Score = 35.1 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 6 DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
D +K TT L +++A D + ++G + +K+ + I+A AG
Sbjct: 77 DNSQTLKFEKGTTTLAFIYQNGIIVAVDSRSTMGPFIASQKVKKINEI-NEYILATIAGG 135
Query: 65 SADA 68
+AD
Sbjct: 136 AADC 139
>gi|170042005|ref|XP_001848734.1| proteasome subunit alpha type 7-1 [Culex quinquefasciatus]
gi|167865546|gb|EDS28929.1| proteasome subunit alpha type 7-1 [Culex quinquefasciatus]
Length = 249
Score = 35.1 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 18/81 (22%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK------VRR--LGKGNIIAGFAGSS 65
+T + VR VVV+ V K + K VR+ L +++ FAG +
Sbjct: 30 KGSTAVGVRGKDVVVLG----------VEKKSVAKLQEERTVRKICLLDDHVVMAFAGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQL 86
ADA L+ R + + + + +
Sbjct: 80 ADARILINRAQVECQSHKLNV 100
>gi|50286241|ref|XP_445549.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524854|emb|CAG58460.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 35.1 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V V++ D + + G + K+ R+ NI +GS+AD + +
Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRV-HDNIWCCRSGSAADTQAVADI 77
Query: 75 LEKKLEQYPNQ 85
++ L+ Y Q
Sbjct: 78 VQYYLDMYEGQ 88
>gi|17933602|ref|NP_525092.1| proteasome 28kD subunit 1 [Drosophila melanogaster]
gi|12643272|sp|P22769|PSA71_DROME RecName: Full=Proteasome subunit alpha type-7-1; AltName:
Full=PROS-Dm28.1; AltName: Full=Proteasome 28 kDa
subunit 1
gi|8386|emb|CAA44174.1| 28 KDa proteasome subunit [Drosophila melanogaster]
gi|7293190|gb|AAF48573.1| proteasome 28kD subunit 1 [Drosophila melanogaster]
gi|17945625|gb|AAL48863.1| RE28175p [Drosophila melanogaster]
gi|46254474|gb|AAS86210.1| alpha4 proteasome subunit [Drosophila melanogaster]
gi|46254476|gb|AAS86211.1| alpha4 proteasome subunit [Drosophila melanogaster]
gi|46254478|gb|AAS86212.1| alpha4 proteasome subunit [Drosophila melanogaster]
gi|46254480|gb|AAS86213.1| alpha4 proteasome subunit [Drosophila melanogaster]
gi|46254482|gb|AAS86214.1| alpha4 proteasome subunit [Drosophila melanogaster]
gi|46254484|gb|AAS86215.1| alpha4 proteasome subunit [Drosophila melanogaster]
gi|46254486|gb|AAS86216.1| alpha4 proteasome subunit [Drosophila melanogaster]
gi|220948288|gb|ACL86687.1| Pros28.1-PA [synthetic construct]
gi|220960436|gb|ACL92754.1| Pros28.1-PA [synthetic construct]
Length = 249
Score = 35.1 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 18/81 (22%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANA------RKVRRL--GKGNIIAGFAGSS 65
+T + VR VV+ V K + RKVR++ +++ FAG +
Sbjct: 30 KGSTAVGVRGANCVVLG----------VEKKSVAQLQEDRKVRKICMLDNHVVMAFAGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQL 86
ADA ++ R + + + + +
Sbjct: 80 ADARIMINRAQVECQSHRLNV 100
>gi|326435830|gb|EGD81400.1| proteasome subunit beta type-6 [Salpingoeca sp. ATCC 50818]
Length = 220
Score = 35.1 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V VVI D + + G V K+ +L I +GS+AD + +
Sbjct: 20 GTTIMAVEFADGVVIGADSRTTTGAYVANRVTDKLTKL-TDYIYCCRSGSAADTQAIADI 78
Query: 75 LEKKLEQYP 83
+ LE +
Sbjct: 79 VRYYLELHS 87
>gi|299743502|ref|XP_001835816.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
gi|298405683|gb|EAU85881.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
Length = 253
Score = 35.1 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
TIL V VIAGD + S G + A KV +L ++A GFA AD +
Sbjct: 21 GGTILAVAGADFTVIAGDTRQSEGYNIQTRYAPKVFKLTDKAVLAVNGFA---ADGNMFV 77
Query: 73 ERLEKKLEQYP 83
++++++LE Y
Sbjct: 78 KKVKQRLEWYR 88
>gi|46254496|gb|AAS86221.1| alpha4 proteasome subunit [Drosophila sechellia]
gi|46254498|gb|AAS86222.1| alpha4 proteasome subunit [Drosophila sechellia]
gi|46254500|gb|AAS86223.1| alpha4 proteasome subunit [Drosophila sechellia]
Length = 249
Score = 35.1 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 18/81 (22%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANA------RKVRRL--GKGNIIAGFAGSS 65
+T + VR VV+ V K + RKVR++ +++ FAG +
Sbjct: 30 KGSTAVGVRGANCVVLG----------VEKKSVAKLQEDRKVRKICMLDNHVVMAFAGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQL 86
ADA ++ R + + + + +
Sbjct: 80 ADARIMINRAQVECQSHRLNV 100
>gi|46254462|gb|AAS86204.1| alpha4 proteasome subunit [Drosophila simulans]
gi|46254464|gb|AAS86205.1| alpha4 proteasome subunit [Drosophila simulans]
gi|46254466|gb|AAS86206.1| alpha4 proteasome subunit [Drosophila simulans]
gi|46254468|gb|AAS86207.1| alpha4 proteasome subunit [Drosophila simulans]
gi|46254470|gb|AAS86208.1| alpha4 proteasome subunit [Drosophila simulans]
gi|46254472|gb|AAS86209.1| alpha4 proteasome subunit [Drosophila simulans]
gi|46254488|gb|AAS86217.1| alpha4 proteasome subunit [Drosophila mauritiana]
gi|46254490|gb|AAS86218.1| alpha4 proteasome subunit [Drosophila mauritiana]
gi|46254492|gb|AAS86219.1| alpha4 proteasome subunit [Drosophila mauritiana]
gi|46254494|gb|AAS86220.1| alpha4 proteasome subunit [Drosophila mauritiana]
Length = 249
Score = 35.1 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 18/81 (22%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANA------RKVRRL--GKGNIIAGFAGSS 65
+T + VR VV+ V K + RKVR++ +++ FAG +
Sbjct: 30 KGSTAVGVRGANCVVLG----------VEKKSVAKLQEDRKVRKICMLDNHVVMAFAGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQL 86
ADA ++ R + + + + +
Sbjct: 80 ADARIMINRAQVECQSHRLNV 100
>gi|332841886|ref|XP_522799.2| PREDICTED: proteasome subunit beta type-11-like [Pan troglodytes]
Length = 300
Score = 35.1 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 62/172 (36%), Gaps = 32/172 (18%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H H TT L R V+ A D + S G V + KV + + +++ +G+SAD
Sbjct: 42 HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQ-HLLGTTSGTSAD 100
Query: 68 AFTLLERLE---KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI--------LIA--- 113
T L+ + E QL S AK L AM+ +A
Sbjct: 101 CATWYRVLQRELRLRELREGQLP-SVASAAKL---------LSAMMSQYRGLDLCVATAL 150
Query: 114 ---DKT--ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
D++ + G L+ + ++GSG YA S +E
Sbjct: 151 CGWDRSGPELFYVYSDGTRLQ--GDIFSVGSGSPYAYGVLDRGYRYDMSTQE 200
>gi|193783753|dbj|BAG53735.1| unnamed protein product [Homo sapiens]
Length = 300
Score = 35.1 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 62/172 (36%), Gaps = 32/172 (18%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H H TT L R V+ A D + S G V + KV + + +++ +G+SAD
Sbjct: 42 HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQ-HLLGTTSGTSAD 100
Query: 68 AFTLLERLE---KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI--------LIA--- 113
T L+ + E QL S AK L AM+ +A
Sbjct: 101 CATWYRVLQRELRLRELREGQLP-SVASAAKL---------LSAMMSQYRGLDLCVATAL 150
Query: 114 ---DKT--ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
D++ + G L+ + ++GSG YA S +E
Sbjct: 151 CGWDRSGPELFYVYSDGTRLQ--GDIFSVGSGSPYAYGVLDRGYRYDMSTQE 200
>gi|153791216|ref|NP_001093250.1| proteasome subunit beta type-11 precursor [Homo sapiens]
gi|158513330|sp|A5LHX3|PSB11_HUMAN RecName: Full=Proteasome subunit beta type-11; AltName:
Full=Proteasome subunit beta-5t; Flags: Precursor
gi|148537365|dbj|BAF63540.1| proteasome subunit beta5t [Homo sapiens]
gi|307686397|dbj|BAJ21129.1| proteasome (prosome, macropain) subunit, beta type, 11 [synthetic
construct]
Length = 300
Score = 35.1 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 62/172 (36%), Gaps = 32/172 (18%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H H TT L R V+ A D + S G V + KV + + +++ +G+SAD
Sbjct: 42 HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQ-HLLGTTSGTSAD 100
Query: 68 AFTLLERLE---KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI--------LIA--- 113
T L+ + E QL S AK L AM+ +A
Sbjct: 101 CATWYRVLQRELRLRELREGQLP-SVASAAKL---------LSAMMSQYRGLDLCVATAL 150
Query: 114 ---DKT--ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
D++ + G L+ + ++GSG YA S +E
Sbjct: 151 CGWDRSGPELFYVYSDGTRLQ--GDIFSVGSGSPYAYGVLDRGYRYDMSTQE 200
>gi|321470386|gb|EFX81362.1| hypothetical protein DAPPUDRAFT_303409 [Daphnia pulex]
Length = 276
Score = 35.1 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V++ D + + G V N K+ + AG AG++AD +
Sbjct: 39 GTTIAGFIFKDGVILGADTRATEGNIVADKNCFKLHYMAPNIYCAG-AGTAADLEMTTLQ 97
Query: 75 LEKKLEQYPNQLLR 88
+ +LE + R
Sbjct: 98 MSSQLELHRLNTGR 111
>gi|56118302|ref|NP_001007906.1| proteasome subunit beta type-1 [Gallus gallus]
gi|38680347|gb|AAR26544.1| proteasome subunit beta-type [Gallus gallus]
Length = 237
Score = 35.1 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T+L + + ++A D ++S G + ++ K RL + +I G +G D
Sbjct: 27 SPYTFNGGTVLAIAGEDFCIVASDTRLSEGYAIHSRDSPKCYRLTEQTVI-GCSGFHGDC 85
Query: 69 FTLLERLEKKLEQYP 83
TL + +E +L+ Y
Sbjct: 86 LTLTKIIEARLKMYK 100
>gi|255725804|ref|XP_002547828.1| proteasome component PRE3 precursor [Candida tropicalis MYA-3404]
gi|240133752|gb|EER33307.1| proteasome component PRE3 precursor [Candida tropicalis MYA-3404]
Length = 212
Score = 35.1 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V+ D V++A D + + G + K+ ++ I +GS+AD + +
Sbjct: 19 GTSIMAVKFDKGVILAADSRTTTGTYIANRVTDKLTQI-HDTIYCCRSGSAADTQAIADI 77
Query: 75 LEKKLEQYPNQLL 87
++ L+ Y +QL
Sbjct: 78 VKYYLQLYSSQLP 90
>gi|221484304|gb|EEE22600.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
Length = 359
Score = 35.1 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T++ V + V GD ++S G ++ K+ +L ++ +G AD TL
Sbjct: 156 GGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKL-TDKVVLATSGMEADKTTLHNL 214
Query: 75 LEKKLEQYPNQ 85
L+ ++EQY +Q
Sbjct: 215 LKIRIEQYTHQ 225
>gi|88602139|ref|YP_502317.1| proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
gi|121724010|sp|Q2FQL8|PSB_METHJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|88187601|gb|ABD40598.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanospirillum hungatei
JF-1]
Length = 209
Score = 35.1 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 20/172 (11%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
M TT + + + VV+A + + ++G + A+K+ ++ I AG DA L
Sbjct: 8 MKGTTTVGIVFETGVVLASEKRATMGYLISNKTAKKIYQIAP-RIGLTTAGGVGDAQQLA 66
Query: 73 ERL--EKKL-EQYPN---QLLRSSVELAKDWRMDKYLRNLEAMIL-IADKTITLV----- 120
+ E L E + +S L+ ++ +++ D+T ++
Sbjct: 67 RLMTVEANLYEIRRGKRISVQAASTLLSNILHGNRMFPFYVQLLIGGVDETGPVLFSVDA 126
Query: 121 ITGMGDVLEPENGVMAIGSGGSYA---LSAARALMSTQNSAEEIARKAMSIA 169
+ G G E+G++A GSG A L L + SA E+A +A+ A
Sbjct: 127 VGGTGK----EDGIVATGSGSPMAYGVLEDRYTLGMDERSAIELAIRALRSA 174
>gi|66810508|ref|XP_638961.1| proteasome subunit beta type 7 [Dictyostelium discoideum AX4]
gi|74897083|sp|Q54QR2|PSB7_DICDI RecName: Full=Proteasome subunit beta type-7; Flags: Precursor
gi|60467585|gb|EAL65606.1| proteasome subunit beta type 7 [Dictyostelium discoideum AX4]
Length = 266
Score = 35.1 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 22/172 (12%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ V G VV+ D + + G V N K+ + G AG++AD +
Sbjct: 34 GTTIVGVVYKGGVVLGADTRATEGPIVADKNCEKIHYIADNIYCCG-AGTAADTESATAL 92
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT--LVITG---MG---D 126
+ KL+ + + K R+ L L+ M+ I+ L++ G G
Sbjct: 93 ISSKLKLHK-------LSTGKQTRVITALTMLKQMLFKYQGHISAALILGGIDINGPSLH 145
Query: 127 VLEPENGV-----MAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI 172
+ P + +GSG A++ A + EE IA A +I++ I
Sbjct: 146 TIYPHGSTDQLPYVTMGSGSLAAMAVFEAKYKNDMTKEEAIALVAEAISSGI 197
>gi|332289144|ref|YP_004419996.1| putative transglycosylase [Gallibacterium anatis UMN179]
gi|330432040|gb|AEC17099.1| putative transglycosylase [Gallibacterium anatis UMN179]
Length = 486
Score = 35.1 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 96 DWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
+W+ D L EA++ +AD I G D+
Sbjct: 174 EWQTDNNLSIEEALLAVADGKADYTIAGSMDI 205
>gi|221505718|gb|EEE31363.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 361
Score = 35.1 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T++ V + V GD ++S G ++ K+ +L ++ +G AD TL
Sbjct: 158 GGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKL-TDKVVLATSGMEADKTTLHNL 216
Query: 75 LEKKLEQYPNQ 85
L+ ++EQY +Q
Sbjct: 217 LKIRIEQYTHQ 227
>gi|786582|gb|AAB33092.1| proteasome subunit MB1 [Homo sapiens]
Length = 215
Score = 35.1 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG + D
Sbjct: 9 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAGDC 63
>gi|327239592|gb|AEA39640.1| proteasome subunit beta type 10 [Epinephelus coioides]
Length = 148
Score = 35.1 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 3 VMGDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
+ G+ M TTI V + VV+ D + + + V K+ + G
Sbjct: 28 LFGEGQTPKAMKTGTTIAGVVFNDGVVLGADTRATSSEVVADKMCAKIHYIAPNIYCCG- 86
Query: 62 AGSSADAFTLLERLEKKLEQYPNQLLR 88
AG++AD E L L + R
Sbjct: 87 AGTAADTEKTTELLSSNLTIFSLNSGR 113
>gi|284165547|ref|YP_003403826.1| proteasome endopeptidase complex, subunit alpha [Haloterrigena
turkmenica DSM 5511]
gi|284015202|gb|ADB61153.1| proteasome endopeptidase complex, alpha subunit [Haloterrigena
turkmenica DSM 5511]
Length = 249
Score = 35.1 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKA-NARKVRRLGKGNIIAGFAGSSADAFTLL 72
T + +R VV+A D QVS ++M+ + K+ + ++ AG ADA L+
Sbjct: 35 RGTASVGIRTPDGVVLAADRQVS--SSLMEPSSVEKIHK-ADNHVGIASAGHVADARQLV 91
Query: 73 ER 74
+
Sbjct: 92 DL 93
>gi|237838257|ref|XP_002368426.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
gi|211966090|gb|EEB01286.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
Length = 359
Score = 35.1 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T++ V + V GD ++S G ++ K+ +L ++ +G AD TL
Sbjct: 156 GGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKL-TDKVVLATSGMEADKTTLHNL 214
Query: 75 LEKKLEQYPNQ 85
L+ ++EQY +Q
Sbjct: 215 LKIRIEQYTHQ 225
>gi|284097534|ref|ZP_06385607.1| 20S proteasome, A and B subunits [Candidatus Poribacteria sp.
WGA-A3]
gi|283830956|gb|EFC34993.1| 20S proteasome, A and B subunits [Candidatus Poribacteria sp.
WGA-A3]
Length = 238
Score = 35.1 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKV 49
H TT+L V+ + VVI GD + G V KV
Sbjct: 16 HGTTVLAVKYENGVVIVGDRRAIEGYQVASRRMEKV 51
>gi|221106330|ref|XP_002156049.1| PREDICTED: similar to proteasome (prosome, macropain) subunit,
beta type, 5, partial [Hydra magnipapillata]
Length = 83
Score = 35.1 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 5 GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
+ ++ H TT L + V++A D + S G + +KV + ++ AG
Sbjct: 9 TNGDTKIQFHHGTTTLAFKFKHGVIVAVDSRASAGSYIASQTVKKVIEINPY-LLGTMAG 67
Query: 64 SSADA 68
+AD
Sbjct: 68 GAADC 72
>gi|219115083|ref|XP_002178337.1| proteasome beta subunit [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410072|gb|EEC50002.1| proteasome beta subunit [Phaeodactylum tricornutum CCAP 1055/1]
Length = 225
Score = 35.1 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + VV+ D +VS G V + K+ ++ +I A +GS+AD L +
Sbjct: 24 GTTIMAIPTAEGVVLGADSRVSTGTYVANRVSDKIAQMS-DHIFACRSGSAADTQALTDY 82
Query: 75 LEKKLEQ 81
++ L+Q
Sbjct: 83 VKFYLQQ 89
>gi|2654060|gb|AAB87680.1| proteasome subunit X [Danio rerio]
Length = 218
Score = 35.1 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 49 LHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC 103
>gi|196000078|ref|XP_002109907.1| hypothetical protein TRIADDRAFT_21588 [Trichoplax adhaerens]
gi|190588031|gb|EDV28073.1| hypothetical protein TRIADDRAFT_21588 [Trichoplax adhaerens]
Length = 229
Score = 35.1 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 67/176 (38%), Gaps = 30/176 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + +++ D + S G + N K+ + G AG++AD +
Sbjct: 16 GTTIAGIVFKDGIILGADTRASEGTFIADKNCSKIHYISPNMYCCG-AGTAADTEYVTRL 74
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLE----AMILIADKT----ITLVI 121
+ K+E + R +++ + K L + A +++ +
Sbjct: 75 ISSKIELHSLTTERKPRVVAALTMLKQ-----MLFRYQGYVGAYLVLGGVDSTGPHLYTV 129
Query: 122 --TGMGDVLEPENGVMAIGSGGSYALSA--ARALMSTQNS-AEEIARKAMSIAADI 172
G D L + +GSG A++ R ++ + A+++ R A IAA I
Sbjct: 130 HARGSSDKL----PYVTMGSGSLAAMAVFEDRYHVNMELDEAKQLVRDA--IAAGI 179
>gi|225719232|gb|ACO15462.1| Proteasome subunit beta type-5 precursor [Caligus clemensi]
gi|225719406|gb|ACO15549.1| Proteasome subunit beta type-5 precursor [Caligus clemensi]
Length = 270
Score = 35.1 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
H TT L + +G ++A D + + G + + RK+ + ++A AG +AD
Sbjct: 60 HGTTTLGFKYEGGTILAVDSRATSGGYIGSGSVRKIIEVS-DYLLATMAGGAADCM 114
>gi|225705308|gb|ACO08500.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 236
Score = 35.1 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T+L V + ++A D ++S G ++ ++ K +L +I G +G D
Sbjct: 26 SPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTNTTVI-GCSGFHGDC 84
Query: 69 FTLLERLEKKLEQYP 83
TL + ++ +L+ Y
Sbjct: 85 LTLTKIIDARLKMYK 99
>gi|209732446|gb|ACI67092.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 35.1 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T+L V + ++A D ++S G ++ ++ K +L +I G +G D
Sbjct: 27 SPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTNTTVI-GCSGFHGDC 85
Query: 69 FTLLERLEKKLEQYP 83
TL + ++ +L+ Y
Sbjct: 86 LTLTKIIDARLKMYK 100
>gi|168014771|ref|XP_001759925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689055|gb|EDQ75429.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 269
Score = 35.1 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
TT L V++A D + S+G + + +K+ + ++ AG +AD
Sbjct: 52 KGTTTLAFVFKHGVIVAADSRASMGNYISSQSVKKILEINPY-LLGTMAGGAADC 105
>gi|322801471|gb|EFZ22132.1| hypothetical protein SINV_09089 [Solenopsis invicta]
Length = 249
Score = 35.1 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 18/78 (23%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK------VRR--LGKGNIIAGFAGSS 65
+T + VR VVV+ V K + K VR+ L ++I FAG +
Sbjct: 30 KGSTAVGVRGADVVVLG----------VEKKSVAKLQEERTVRKICLLDDHVIMAFAGLT 79
Query: 66 ADAFTLLERLEKKLEQYP 83
ADA L+ R + + + +
Sbjct: 80 ADARVLINRAQVECQSHK 97
>gi|320586980|gb|EFW99643.1| proteasome component [Grosmannia clavigera kw1407]
Length = 276
Score = 35.1 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+++ ++ +G VV+A D S G + ++R ++I GF+G +D L
Sbjct: 40 GTSVVALKFNGGVVMAADNLASYGSLARFNSTLRLRSFANTSVI-GFSGDVSDMQYLDRH 98
Query: 75 L-EKKLEQYPNQLLRSSVE 92
L E +++ + S+ E
Sbjct: 99 LTELAIDETYDNPAPSAEE 117
>gi|212721760|ref|NP_001132821.1| hypothetical protein LOC100194311 [Zea mays]
gi|194695490|gb|ACF81829.1| unknown [Zea mays]
gi|194704048|gb|ACF86108.1| unknown [Zea mays]
gi|195623962|gb|ACG33811.1| proteasome subunit beta type 5 precursor [Zea mays]
Length = 280
Score = 35.1 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TT L D V++A D + S+G + RK+ + ++ AG +AD
Sbjct: 60 KGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADCQFWHR 118
Query: 74 RLEKKLEQY 82
L K +
Sbjct: 119 NLGTKCRLH 127
>gi|164656220|ref|XP_001729238.1| hypothetical protein MGL_3705 [Malassezia globosa CBS 7966]
gi|159103128|gb|EDP42024.1| hypothetical protein MGL_3705 [Malassezia globosa CBS 7966]
Length = 285
Score = 35.1 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
TTI+ + VV+ D + + G V N K+ + G AG++AD
Sbjct: 40 GTTIVGLIYKDGVVLGADTRATEGPIVADKNCEKIHYITDSIRCCG-AGTAAD 91
>gi|302414586|ref|XP_003005125.1| proteasome component PRE4 [Verticillium albo-atrum VaMs.102]
gi|261356194|gb|EEY18622.1| proteasome component PRE4 [Verticillium albo-atrum VaMs.102]
Length = 276
Score = 34.7 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
T+++ ++ VVIA D S G N +++R + +I GF G +D
Sbjct: 40 GTSVIAIKYSEGVVIAADNLASYGSLARFTNVKRLRTFAESTVI-GFGGDVSD 91
>gi|332019371|gb|EGI59872.1| Proteasome subunit alpha type-7-1 [Acromyrmex echinatior]
Length = 249
Score = 34.7 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 18/78 (23%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK------VRR--LGKGNIIAGFAGSS 65
+T + VR VVV+ V K + K VR+ L ++I FAG +
Sbjct: 30 KGSTAVGVRGADVVVLG----------VEKKSVAKLQEERTVRKICLLDDHVIMAFAGLT 79
Query: 66 ADAFTLLERLEKKLEQYP 83
ADA L+ R + + + +
Sbjct: 80 ADARVLINRAQVECQSHK 97
>gi|149627581|ref|XP_001509497.1| PREDICTED: similar to proteasome [Ornithorhynchus anatinus]
Length = 263
Score = 34.7 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 57 LHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC 111
>gi|46254528|gb|AAS86237.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
mauritiana]
Length = 252
Score = 34.7 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 18/83 (21%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANA------RKVRRL--GKGNIIAGFAGSS 65
+T++ +R + +V+ V K + R VR++ +++ F+G +
Sbjct: 30 RGSTVVGLRTNNAIVLG----------VEKRSVGDLQEERMVRKICMLDDHVVMTFSGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQLLR 88
ADA LL R + + + + +
Sbjct: 80 ADARILLSRAQMEAQSHRLNFEK 102
>gi|322704637|gb|EFY96230.1| hypothetical protein MAA_08341 [Metarhizium anisopliae ARSEF 23]
Length = 399
Score = 34.7 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 42 MKANARKVRRLGK---GNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWR 98
+K +A +VR+L + F +A+ L++ E + +S++E AK W
Sbjct: 306 LKEDADEVRQLNATIFDEVNLAFNNLTAETVRNLQKYVLLSEAKAGKSAKSAIEAAKKW- 364
Query: 99 MDKYLRNLEAM 109
+++L L AM
Sbjct: 365 SEQFLAELSAM 375
>gi|17380206|sp|Q9IB83|PSB1B_CARAU RecName: Full=Proteasome subunit beta type-1-B; AltName: Full=20S
proteasome beta-6 subunit B; Short=B6-B
gi|7768841|dbj|BAA95592.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 237
Score = 34.7 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T+L V + ++A D ++S G ++ ++ K +L +I G +G D
Sbjct: 27 SPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFHGDC 85
Query: 69 FTLLERLEKKLEQYP 83
TL + +E +L+ Y
Sbjct: 86 LTLTKIIEARLKMYK 100
>gi|326524101|dbj|BAJ97061.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 34.7 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TT L+ D V++A D + S+G + RK+ + ++ AG +AD
Sbjct: 59 KGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADCQFWHR 117
Query: 74 RLEKKLEQY 82
L K +
Sbjct: 118 NLGVKCRLH 126
>gi|331226376|ref|XP_003325858.1| proteasome subunit [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309304848|gb|EFP81439.1| proteasome subunit [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 293
Score = 34.7 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
TTI+ + +G + + D + + G V N K+ + G AG++AD
Sbjct: 42 GTTIVGLVWEGGICLGADTRATEGPIVADKNCEKIHFISDNIRCCG-AGTAAD 93
>gi|156848022|ref|XP_001646894.1| hypothetical protein Kpol_2002p109 [Vanderwaltozyma polyspora DSM
70294]
gi|156117575|gb|EDO19036.1| hypothetical protein Kpol_2002p109 [Vanderwaltozyma polyspora DSM
70294]
Length = 215
Score = 34.7 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V V++ D + + G + K+ R+ I +GS+AD + +
Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRV-HDKIWCCRSGSAADTQAVADI 77
Query: 75 LEKKLEQYPNQLLRSSVELA 94
++ LE Y Q S E+A
Sbjct: 78 VQYHLEMYTAQYGEPSTEVA 97
>gi|307181443|gb|EFN69038.1| Proteasome subunit alpha type-7-1 [Camponotus floridanus]
Length = 249
Score = 34.7 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 18/78 (23%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK------VRR--LGKGNIIAGFAGSS 65
+T + VR VVV+ V K + K VR+ L ++I FAG +
Sbjct: 30 KGSTAVGVRGADVVVLG----------VEKKSVAKLQEERTVRKICLLDDHVIMAFAGLT 79
Query: 66 ADAFTLLERLEKKLEQYP 83
ADA L+ R + + + +
Sbjct: 80 ADARVLINRAQVECQSHK 97
>gi|226471340|emb|CAX70751.1| proteasome (prosome, macropain) subunit, beta type, 1
[Schistosoma japonicum]
Length = 212
Score = 34.7 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
T++ + + +IA D ++ G ++ N ++ +LG+GN++ G+AG D TL +
Sbjct: 9 GGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFKLGRGNVL-GYAGFHGDVLTLTK 67
Query: 74 RLEKKLEQYP 83
LE K++ Y
Sbjct: 68 LLENKVKTYR 77
>gi|126278093|ref|XP_001379940.1| PREDICTED: similar to proteasome [Monodelphis domestica]
Length = 263
Score = 34.7 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 57 LHGTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC 111
>gi|301779700|ref|XP_002925260.1| PREDICTED: proteasome subunit beta type-1-like [Ailuropoda
melanoleuca]
gi|281351745|gb|EFB27329.1| hypothetical protein PANDA_014727 [Ailuropoda melanoleuca]
Length = 241
Score = 34.7 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T+L + + ++A D ++S G +V ++ K +L + G +G D
Sbjct: 31 SPYAFNGGTVLAIAGEDFSIVASDTRLSEGYSVHTRDSPKCYKL-TDKTVIGCSGFHGDC 89
Query: 69 FTLLERLEKKLEQYP 83
TL + +E +L+ Y
Sbjct: 90 LTLTKIIEARLKMYK 104
>gi|48477758|ref|YP_023464.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
gi|74567841|sp|Q6L181|PSB_PICTO RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|48430406|gb|AAT43271.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
Length = 210
Score = 34.7 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + + V++ D + ++ + NA+K+ ++ + AG DA L+
Sbjct: 7 GTTTVGITAGDYVIMGTDSRATMENFISNKNAQKLYQIDNYAAMT-IAGLVGDAQVLVRY 65
Query: 75 LEKKLEQYP 83
++ ++E Y
Sbjct: 66 MKAEMELYR 74
>gi|301624547|ref|XP_002941560.1| PREDICTED: proteasome subunit beta type-5 [Xenopus (Silurana)
tropicalis]
Length = 257
Score = 34.7 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+H TT L + V++A D + + G + +KV + ++ AG +AD
Sbjct: 51 LHGTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADC 105
>gi|254578806|ref|XP_002495389.1| ZYRO0B10142p [Zygosaccharomyces rouxii]
gi|238938279|emb|CAR26456.1| ZYRO0B10142p [Zygosaccharomyces rouxii]
Length = 215
Score = 34.7 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V V++ D + ++G V K+ R+ + +GS+AD + +
Sbjct: 19 GTSIMAVSFKDGVILGADSRTTMGPYVANRVTDKLTRV-HDKVWCCRSGSAADTQAVADI 77
Query: 75 LEKKLEQYPNQ 85
++ L+ Y Q
Sbjct: 78 VQYYLDLYTAQ 88
>gi|150864238|ref|XP_001382979.2| hypothetical protein PICST_41720 [Scheffersomyces stipitis CBS
6054]
gi|149385494|gb|ABN64950.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 217
Score = 34.7 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V+ V++ D + + G + K+ ++ I +GS+AD + +
Sbjct: 19 GTSIMAVKFKDGVILGADSRTTTGSYIANRVTDKLTQI-HDTIYCCRSGSAADTQAVADI 77
Query: 75 LEKKLEQYPNQLL 87
++ L+ Y +QL
Sbjct: 78 VKYYLQIYASQLP 90
>gi|59275969|dbj|BAD89555.1| proteasome subunit [Oncorhynchus mykiss]
Length = 277
Score = 34.7 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + VV+ D + + G+ V K+ + G AG++AD +
Sbjct: 43 GTTIAGIVCKDGVVLGADTRATSGEVVADKMCAKIHYISPNMYCCG-AGTAADTEKTTDL 101
Query: 75 LEKKLEQYPNQLLR 88
L L + R
Sbjct: 102 LSSNLTIFSMNSGR 115
>gi|170097699|ref|XP_001880069.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164645472|gb|EDR09720.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 273
Score = 34.7 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 71/191 (37%), Gaps = 34/191 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ +V+ D + + G V N K+ + + G AG++AD
Sbjct: 37 GTTIVGCLFKDGIVLGADTRATEGPIVADKNCEKIHYITESIRCCG-AGTAADTEFTTAL 95
Query: 75 LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILI----ADKTITLVI--TG 123
+ +E + Q R +++ + K + +Y + A +++ A I G
Sbjct: 96 ISSNMEMHALQTGRKPRVVTAMTMLKQ-MLFRYQGQVGAALVLGGVDATGAHLFTIHPHG 154
Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI-------- 172
D L + +GSG A++ + A + + ++IAA I
Sbjct: 155 STDKL----PYVTMGSGSLAAMAVFESGWKPNMEREDALNLVK--LAIAAGIFNDLGSGS 208
Query: 173 ----CVYTNHN 179
C+ T +N
Sbjct: 209 NIDACIITANN 219
>gi|156844743|ref|XP_001645433.1| hypothetical protein Kpol_534p57 [Vanderwaltozyma polyspora DSM
70294]
gi|156116095|gb|EDO17575.1| hypothetical protein Kpol_534p57 [Vanderwaltozyma polyspora DSM
70294]
Length = 215
Score = 34.7 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V V++ D + + G + K+ R+ I +GS+AD + +
Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRV-HDKIWCCRSGSAADTQAVADI 77
Query: 75 LEKKLEQYPNQLLRSSVELA 94
++ LE Y Q S E+A
Sbjct: 78 VQYHLEMYTAQYGEPSTEVA 97
>gi|330505170|ref|YP_004382039.1| hypothetical protein MDS_4256 [Pseudomonas mendocina NK-01]
gi|328919456|gb|AEB60287.1| hypothetical protein MDS_4256 [Pseudomonas mendocina NK-01]
Length = 257
Score = 34.7 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 39/100 (39%), Gaps = 18/100 (18%)
Query: 65 SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
+AD L E E +L Q + L R+ V LA DKY R LEA + +D
Sbjct: 121 AADLPFLPEEREDRLAQLQDLLPRADVSLA-----DKYRRILEAYQIESD---------Y 166
Query: 125 GDVLEPENGVMAIGSGGS----YALSAARALMSTQNSAEE 160
G LE G + G GGS + L A E
Sbjct: 167 GRTLEAWRGELNQGDGGSRSVEFLRLGRSMLYYQTLDAHE 206
>gi|66800081|ref|XP_628966.1| proteasome subunit beta type 5 [Dictyostelium discoideum AX4]
gi|74896741|sp|Q54BC8|PSB5_DICDI RecName: Full=Proteasome subunit beta type-5; Flags: Precursor
gi|60462347|gb|EAL60569.1| proteasome subunit beta type 5 [Dictyostelium discoideum AX4]
Length = 272
Score = 34.7 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L G ++++ D + + G V + +KV + ++ AG +AD
Sbjct: 61 HGTTTLAFVYGGGIIVSVDSKSTQGPYVASRSVKKVIEITP-TLLGTMAGGAADC 114
>gi|17380207|sp|Q9IB84|PSB1A_CARAU RecName: Full=Proteasome subunit beta type-1-A; AltName: Full=20S
proteasome beta-6 subunit A; Short=B6-A
gi|7768839|dbj|BAA95591.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 238
Score = 34.7 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 9 YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
+ T+L V + ++A D ++S G ++ ++ K +L +I G +G D
Sbjct: 28 SPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFHGDC 86
Query: 69 FTLLERLEKKLEQYP 83
TL + +E +L+ Y
Sbjct: 87 LTLTKIIEARLKMYK 101
>gi|11514002|pdb|1G0U|K Chain K, A Gated Channel Into The Proteasome Core Particle
gi|11514016|pdb|1G0U|Y Chain Y, A Gated Channel Into The Proteasome Core Particle
gi|20150387|pdb|1JD2|K Chain K, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non-Covalent Proteasome Inhibitor
gi|20150394|pdb|1JD2|R Chain R, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non-Covalent Proteasome Inhibitor
gi|93279378|pdb|2F16|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279392|pdb|2F16|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279666|pdb|2FNY|K Chain K, Homobelactosin C Bound To The Yeast 20s Proteasome
gi|93279680|pdb|2FNY|Y Chain Y, Homobelactosin C Bound To The Yeast 20s Proteasome
gi|99032212|pdb|2FAK|K Chain K, Crystal Structure Of Salinosporamide A In Complex With
The Yeast 20s Proteasome
gi|99032226|pdb|2FAK|Y Chain Y, Crystal Structure Of Salinosporamide A In Complex With
The Yeast 20s Proteasome
gi|112490853|pdb|2GPL|K Chain K, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490867|pdb|2GPL|Y Chain Y, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|178847470|pdb|2ZCY|K Chain K, Yeast 20s Proteasome:syringolin A-Complex
gi|178847484|pdb|2ZCY|Y Chain Y, Yeast 20s Proteasome:syringolin A-Complex
gi|178847512|pdb|3BDM|K Chain K, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847526|pdb|3BDM|Y Chain Y, Yeast 20s Proteasome:glidobactin A-Complex
gi|190016377|pdb|3D29|K Chain K, Proteasome Inhibition By Fellutamide B
gi|190016391|pdb|3D29|Y Chain Y, Proteasome Inhibition By Fellutamide B
gi|197725331|pdb|3E47|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725345|pdb|3E47|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939222|pdb|3DY3|K Chain K, Crystal Structure Of Yeast 20s Proteasome In Complex
With The Epimer Form Of Spirolactacystin
gi|211939236|pdb|3DY3|Y Chain Y, Crystal Structure Of Yeast 20s Proteasome In Complex
With The Epimer Form Of Spirolactacystin
gi|211939250|pdb|3DY4|K Chain K, Crystal Structure Of Yeast 20s Proteasome In Complex
With Spirolactacystin
gi|211939264|pdb|3DY4|Y Chain Y, Crystal Structure Of Yeast 20s Proteasome In Complex
With Spirolactacystin
gi|238828247|pdb|3GPJ|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828261|pdb|3GPJ|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588331|pdb|3GPT|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588345|pdb|3GPT|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588359|pdb|3GPW|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible
Inhibitor Ligand
gi|258588373|pdb|3GPW|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible
Inhibitor Ligand
gi|258588553|pdb|3HYE|K Chain K, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588567|pdb|3HYE|Y Chain Y, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|330689391|pdb|3MG4|K Chain K, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689405|pdb|3MG4|Y Chain Y, Structure Of Yeast 20s Proteasome With Compound 1
Length = 212
Score = 34.7 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
TT L R G +++A D + + G V +KV + ++ AG +AD
Sbjct: 1 TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINP-FLLGTMAGGAADC 52
>gi|255078980|ref|XP_002503070.1| predicted protein [Micromonas sp. RCC299]
gi|226518336|gb|ACO64328.1| predicted protein [Micromonas sp. RCC299]
Length = 237
Score = 34.7 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG VV+ D + S G V + K+ ++ N+ +GS+AD +
Sbjct: 22 GTTIMACVYDGGVVLGADSRTSTGNYVANRASDKITQVM-DNVWMCRSGSAADTQNVCAF 80
Query: 75 LEKKLEQYP 83
++ +E++
Sbjct: 81 VKNAVEEHG 89
>gi|194758026|ref|XP_001961263.1| GF13778 [Drosophila ananassae]
gi|190622561|gb|EDV38085.1| GF13778 [Drosophila ananassae]
Length = 284
Score = 34.7 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
H TT L + G V++A D + + GQ + +K+ + ++ AG +AD
Sbjct: 72 HGTTTLGFKYKGGVILAVDSRATGGQYIGSQTMKKIVEI-NQFLLGTLAGGAADCV 126
>gi|52548240|gb|AAU82107.1| 20S proteasome beta 5 subunit [Triticum aestivum]
Length = 279
Score = 34.7 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TT L+ D V++A D + S+G + RK+ + ++ AG +AD
Sbjct: 59 KGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADCQFWHR 117
Query: 74 RLEKKLEQY 82
L K +
Sbjct: 118 NLGVKCRLH 126
>gi|1220188|gb|AAC47281.1| testes-specific proteasome subunit [Drosophila melanogaster]
Length = 249
Score = 34.7 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 18/83 (21%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANA------RKVRRL--GKGNIIAGFAGSS 65
+T++ +R + +VI V K + R VR++ +++ F+G +
Sbjct: 30 RGSTVMGLRTNNAIVIG----------VEKRSVGDLQEERMVRKICMLDDHVVMTFSGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQLLR 88
ADA L+ R + + + + +
Sbjct: 80 ADARILVSRAQMEAQSHRLNFEK 102
>gi|145520811|ref|XP_001446261.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413738|emb|CAK78864.1| unnamed protein product [Paramecium tetraurelia]
Length = 239
Score = 34.7 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 5 GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
D+ ++ T+L + G V++AGD ++S G ++ +A K+ +L ++A AG
Sbjct: 26 SDQWSPYHDNSGTVLAIGIPGAVLVAGDTRLSNGYNILTRDATKLSQLTDKCVLAT-AGQ 84
Query: 65 SADAFTLLERLEKKLEQY 82
AD L + L+++L+ Y
Sbjct: 85 YADFIALRKFLQQRLQLY 102
>gi|321260412|ref|XP_003194926.1| 20S proteasome beta-type subunit; Pre7p [Cryptococcus gattii
WM276]
gi|317461398|gb|ADV23139.1| 20S proteasome beta-type subunit, putative; Pre7p [Cryptococcus
gattii WM276]
Length = 272
Score = 34.7 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLLERL 75
IL + +IAGD + S G ++ ARKV +L ++A GFA AD ++R+
Sbjct: 34 ILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLATNGFA---ADGNNFVKRV 90
Query: 76 EKKLEQY 82
+++LE Y
Sbjct: 91 KQRLEWY 97
>gi|84662644|ref|YP_453609.1| HslV family protein [Xanthomonas phage OP1]
gi|84570693|dbj|BAE72756.1| HslV family protein [Xanthomonas oryzae phage OP1]
Length = 142
Score = 34.7 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 62/165 (37%), Gaps = 40/165 (24%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAGFAGSSADAFTLLE 73
TTI DG +A D QV+ G +K K RRL G + +AG +A
Sbjct: 2 TTIA---YDGQ-SLACDSQVTAGN--VKGKMNKFRRLPGGGVMIVAGEIDLLDNAVQDFL 55
Query: 74 RLE--KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
E L Q E A+ R+D+ G + + P
Sbjct: 56 DGEPPAVLRDQDGQ------ERAQFVRLDR-------------SGCFYSSDGEWNKMYPG 96
Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
+ A+GSG YAL+ + SA ++A+ A ++ +Y+
Sbjct: 97 D---ALGSGAPYALTC----LHIGMSA----KQAVKTACELDLYS 130
>gi|58268196|ref|XP_571254.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113318|ref|XP_774684.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257328|gb|EAL20037.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227489|gb|AAW43947.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 272
Score = 34.7 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLLERL 75
IL + +IAGD + S G ++ ARKV +L ++A GFA AD ++R+
Sbjct: 34 ILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLATNGFA---ADGNNFVKRV 90
Query: 76 EKKLEQY 82
+++LE Y
Sbjct: 91 KQRLEWY 97
>gi|327289325|ref|XP_003229375.1| PREDICTED: proteasome subunit beta type-5-like [Anolis
carolinensis]
Length = 316
Score = 34.7 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+H TT L + V++A D + + G + +KV + ++ AG +AD +
Sbjct: 106 LHGTTTLAFKFQHGVIVAVDSRATAGVYIASQTVKKVIEINPY-LLGTMAGGAADC-SFW 163
Query: 73 ERL 75
ERL
Sbjct: 164 ERL 166
>gi|268680245|ref|YP_003304676.1| ATP-dependent Clp protease ATP-binding subunit clpA
[Sulfurospirillum deleyianum DSM 6946]
gi|268618276|gb|ACZ12641.1| ATP-dependent Clp protease, ATP-binding subunit clpA
[Sulfurospirillum deleyianum DSM 6946]
Length = 732
Score = 34.7 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 64 SSADAFTLLERLEKKLEQYPN-----QLLRSSVELAKDWRMDKYL 103
S DAF +++ L+ E + ++++SVELAK + DK+L
Sbjct: 339 SLEDAFAIVKGLKSHYEAHHGVKYSNDVIKASVELAKKYISDKFL 383
>gi|68482775|ref|XP_714697.1| hypothetical protein CaO19.6991 [Candida albicans SC5314]
gi|46436285|gb|EAK95650.1| hypothetical protein CaO19.6991 [Candida albicans SC5314]
gi|238880954|gb|EEQ44592.1| proteasome component PRE3 precursor [Candida albicans WO-1]
Length = 214
Score = 34.7 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V V++ D + + G + K+ ++ I +GS+AD + +
Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGSYIANRVTDKLTQI-HDTIYCCRSGSAADTQAVADM 77
Query: 75 LEKKLEQYPNQLL 87
++ L+ Y +QL
Sbjct: 78 VKYYLQIYSSQLP 90
>gi|289740977|gb|ADD19236.1| 20S proteasome regulatory subunit beta type PSMB5/PSMB8/PRE2
[Glossina morsitans morsitans]
Length = 279
Score = 34.7 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
H TT L + G V++A D + + GQ + +K+ + ++ AG +AD
Sbjct: 71 HGTTTLGFKYQGGVILAVDSRATGGQFIGSQTMKKIVEI-NQYMLGTLAGGAADCV 125
>gi|241953471|ref|XP_002419457.1| proteasome subunit, putative [Candida dubliniensis CD36]
gi|223642797|emb|CAX43051.1| proteasome subunit, putative [Candida dubliniensis CD36]
Length = 214
Score = 34.7 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V V++ D + + G + K+ ++ I +GS+AD + +
Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGSYIANRVTDKLTQI-HDTIYCCRSGSAADTQAVADM 77
Query: 75 LEKKLEQYPNQLL 87
++ L+ Y +QL
Sbjct: 78 VKYYLQIYSSQLP 90
>gi|213409301|ref|XP_002175421.1| 20S proteasome component alpha 4 [Schizosaccharomyces japonicus
yFS275]
gi|212003468|gb|EEB09128.1| 20S proteasome component alpha 4 [Schizosaccharomyces japonicus
yFS275]
Length = 258
Score = 34.7 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 18/81 (22%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRR--------LGKGNIIAGFAGSS 65
TT + VR V + G V K A K++ L ++ FAG +
Sbjct: 29 RGTTAVGVR-GERVAVIG---------VEKKTAAKLQNSRSSQKIGLVDDHVCLAFAGLN 78
Query: 66 ADAFTLLERLEKKLEQYPNQL 86
ADA L+++ + + Y L
Sbjct: 79 ADARVLIDKARVEAQSYRLNL 99
>gi|13541494|ref|NP_111182.1| proteasome protease subunit beta [Thermoplasma volcanium GSS1]
gi|74575802|sp|Q97AZ7|PSB_THEVO RecName: Full=Proteasome subunit beta; AltName: Full=20S
proteasome beta subunit; AltName: Full=Proteasome core
protein PsmB; Flags: Precursor
gi|14324878|dbj|BAB59804.1| proteasome beta subunit [Thermoplasma volcanium GSS1]
gi|239061209|emb|CAZ48528.1| 20S proteasome beta subunit [Thermoplasma volcanium GSS1]
Length = 211
Score = 34.7 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
TT + + V++A + +V++ +M N +K+ ++ G IAG G DA L+
Sbjct: 8 GTTTVGITLTDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVG---DAQVLV 64
Query: 73 ERLEKKLEQYPNQLLR 88
++ +LE Y L R
Sbjct: 65 RYMKAELELYR--LQR 78
>gi|15292875|gb|AAK92808.1| putative proteasome epsilon chain precursor [Arabidopsis thaliana]
Length = 274
Score = 34.7 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 29/172 (16%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TT L G V++A D + S+G + + +K+ + ++ AG +AD
Sbjct: 56 KGTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHR 114
Query: 74 RLEKKLEQYP-NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL----VITGMGDV- 127
L K + R SV A L A +L + + + L +I G +
Sbjct: 115 NLGIKCRLHELANKRRISVSGA---------SKLLANMLYSYRGMGLSVGTMIAGWDETG 165
Query: 128 -----LEPENGVM-----AIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
++ E G + ++GSG YA + S A E+AR+++
Sbjct: 166 PGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSI 217
>gi|239788939|dbj|BAH71121.1| ACYPI009408 [Acyrthosiphon pisum]
Length = 243
Score = 34.7 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 14/140 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG V+I D + + G + K+ ++ NI +GS+AD + +
Sbjct: 25 GTTIIAAIYDGGVIIGADSRTTTGAYIANRVTDKLTKVC-DNIYCCRSGSAADTQAITDI 83
Query: 75 LEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIADKT-----ITLVITGM 124
+ ++ Q L+R++ + K+ + L A +++A I
Sbjct: 84 VAYYMDLTSIQMDEPPLVRAAANVFKNLIYENR-HQLTAGVIVAGWDSRFGGQVYSINVS 142
Query: 125 GDVLEPENGVMAIGSGGSYA 144
G +++ + GSG SY
Sbjct: 143 GTIVQ--QNISIGGSGSSYL 160
>gi|215701183|dbj|BAG92607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 34.7 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
TT L D V++A D + S+G + RK+ + ++ AG +AD
Sbjct: 6 KGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADC 59
>gi|15222152|ref|NP_172765.1| PBE1; endopeptidase/ peptidase/ threonine-type endopeptidase
[Arabidopsis thaliana]
gi|3914425|sp|O23717|PSB5A_ARATH RecName: Full=Proteasome subunit beta type-5-A; AltName: Full=20S
proteasome beta subunit E-1; AltName: Full=Proteasome
component E; AltName: Full=Proteasome epsilon-1 chain;
Flags: Precursor
gi|4850389|gb|AAD31059.1|AC007357_8 Identical to gb|Y13695 multicatalytic endopeptidase complex,
proteasome precursor, beta subunit (prce) from
Arabidopsis thaliana. ESTs gb|Y09360, gb|F13852,
gb|T20555, gb|T44620, gb|AI099779 and gb|AA586183 come
from this gene
gi|13194776|gb|AAK15550.1|AF348579_1 putative proteasome epsilon chain precursor [Arabidopsis thaliana]
gi|2511596|emb|CAA74029.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
gi|3421117|gb|AAC32072.1| 20S proteasome beta subunit PBE1 [Arabidopsis thaliana]
gi|23297641|gb|AAN12998.1| proteasome epsilon chain precursor [Arabidopsis thaliana]
gi|332190844|gb|AEE28965.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
Length = 274
Score = 34.7 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 29/172 (16%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TT L G V++A D + S+G + + +K+ + ++ AG +AD
Sbjct: 56 KGTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHR 114
Query: 74 RLEKKLEQYP-NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL----VITGMGDV- 127
L K + R SV A L A +L + + + L +I G +
Sbjct: 115 NLGIKCRLHELANKRRISVSGA---------SKLLANMLYSYRGMGLSVGTMIAGWDETG 165
Query: 128 -----LEPENGVM-----AIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
++ E G + ++GSG YA + S A E+AR+++
Sbjct: 166 PGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSI 217
>gi|221070154|ref|ZP_03546259.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
gi|220715177|gb|EED70545.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
Length = 494
Score = 34.7 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE 159
G GDV+EPE+G+ + + G+ A + A
Sbjct: 138 GNGDVVEPEDGLYILYTSGTTGKPKAALVSHRALVAR 174
>gi|156553324|ref|XP_001601425.1| PREDICTED: similar to proteasome beta-subunit [Nasonia
vitripennis]
Length = 248
Score = 34.7 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 18/78 (23%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK------VRR--LGKGNIIAGFAGSS 65
+T + VR VVV+ V K + K VR+ L +++ FAG +
Sbjct: 29 KGSTAVGVRGSDVVVLG----------VEKKSVAKLQEERTVRKICLLDDHVVMAFAGLT 78
Query: 66 ADAFTLLERLEKKLEQYP 83
ADA L+ R + + + +
Sbjct: 79 ADARVLINRAQIECQSHK 96
>gi|57090423|ref|XP_547726.1| PREDICTED: similar to proteasome beta 5 subunit [Canis familiaris]
Length = 282
Score = 34.7 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H H TT L R V+ A D + S G V +RK+ + + +++ +G+SAD
Sbjct: 42 HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGNYVACPASRKIIPVHQ-HLLGTTSGTSAD 100
Query: 68 A 68
Sbjct: 101 C 101
>gi|193716235|ref|XP_001951926.1| PREDICTED: proteasome subunit beta type-6-like [Acyrthosiphon
pisum]
Length = 243
Score = 34.7 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 14/140 (10%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ DG V+I D + + G + K+ ++ NI +GS+AD + +
Sbjct: 25 GTTIIAAIYDGGVIIGADSRTTTGAYIANRVTDKLTKVC-DNIYCCRSGSAADTQAITDI 83
Query: 75 LEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIADKT-----ITLVITGM 124
+ ++ Q L+R++ + K+ + L A +++A I
Sbjct: 84 VAYYMDLTSIQMDEPPLVRAAANVFKNLIYENR-HQLTAGVIVAGWDSRFGGQVYSINVS 142
Query: 125 GDVLEPENGVMAIGSGGSYA 144
G +++ + GSG SY
Sbjct: 143 GTIVQ--QNISIGGSGSSYL 160
>gi|194899688|ref|XP_001979390.1| GG15180 [Drosophila erecta]
gi|190651093|gb|EDV48348.1| GG15180 [Drosophila erecta]
Length = 251
Score = 34.7 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
+T + VR VV+ + + SL + RK+ + ++ FAG +ADA L+
Sbjct: 30 KGSTAVGVRGANCVVLGVE-KSSLSKMQEDRTVRKI-TMLDNHVALAFAGLTADARILIN 87
Query: 74 RLEKKLEQYPNQLLRSS 90
R + + + + ++
Sbjct: 88 RGQVECQSHRLNFEKAV 104
>gi|108757067|ref|YP_630477.1| putative thioredoxin [Myxococcus xanthus DK 1622]
gi|108460947|gb|ABF86132.1| putative thioredoxin [Myxococcus xanthus DK 1622]
Length = 765
Score = 34.7 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 22/90 (24%)
Query: 85 QLLRSSVE---LAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
L RS+ E A+ R D+ R EA++ +A + +++ +G
Sbjct: 383 NLPRSAAEWRAFAEQARADRRYR--EALLAMARAS-----------------AVSLDAGP 423
Query: 142 SYALSAARALMSTQNSAEEIARKAMSIAAD 171
A + L T+ SA E A M+ A D
Sbjct: 424 LKAWLESLTLPRTEASARENAEGVMNSAGD 453
>gi|2055301|dbj|BAA19761.1| proteasome subunit Y [Lethenteron japonicum]
Length = 231
Score = 34.3 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 69/177 (38%), Gaps = 17/177 (9%)
Query: 6 DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
D A + TTI+ V VV D + + G V K+ + I +GS+
Sbjct: 22 DWTSAEVLTGTTIMAVEFADGVVFGADSRTTSGSYVANRVTDKLTPV-HDRIFCCRSGSA 80
Query: 66 ADAFTLLERLEKKL-----EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKT-- 116
AD + + + +L E L+ ++ L KD+ +Y L A I++A DK
Sbjct: 81 ADTQAIADVVNYQLGFHSIEMEEMPLVHTAANLFKDY-CYRYREELMAGIIVAGWDKRKG 139
Query: 117 -ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIA 169
+ G ++ GSG +Y + T + EE KA+S+A
Sbjct: 140 GQVYTVPLGGMLVR--QPFSVGGSGSTYIYGFVDSNYKTGMTKEECMEFTAKALSLA 194
>gi|195489672|ref|XP_002092835.1| GE11446 [Drosophila yakuba]
gi|194178936|gb|EDW92547.1| GE11446 [Drosophila yakuba]
Length = 252
Score = 34.3 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 18/83 (21%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANA------RKVRRL--GKGNIIAGFAGSS 65
+T++ +R + +VI V K + R VR++ +++ F+G +
Sbjct: 30 RGSTVVGLRTNNAIVIG----------VEKRSVGDLQEERIVRKICMLDDHVVMTFSGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQLLR 88
ADA L+ R + + + + +
Sbjct: 80 ADARILVSRAQMEAQSHRLNFEK 102
>gi|218552|dbj|BAA02403.1| proteasome subunit pts1+ [Schizosaccharomyces pombe]
gi|742350|prf||2009376A proteasome:SUBUNIT=pts1
Length = 215
Score = 34.3 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R +V+ D + S G + +KV + ++ AG +AD
Sbjct: 3 HGTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPY-LLGTLAGGAADC 56
>gi|328954291|ref|YP_004371625.1| 20S proteasome A and B subunits [Desulfobacca acetoxidans DSM
11109]
gi|328454615|gb|AEB10444.1| 20S proteasome A and B subunits [Desulfobacca acetoxidans DSM
11109]
Length = 235
Score = 34.3 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 76/182 (41%), Gaps = 30/182 (16%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
T IL + +V+A DGQV+ G+ +++ +K+ L +I+ AG + + ERL
Sbjct: 2 TLILGLAAVDGIVLASDGQVTTGE--VRSPGKKIFPLSN-SILWAAAGELSLIQRVQERL 58
Query: 76 E--------KKLEQYPNQLLRSSV-ELAK-DWRM-------DKYLRNLEAMILIAD---K 115
L +L+++ V EL + D+R D+ ++ A + A+ K
Sbjct: 59 TALPLDASLANLRDQIGELIKNCVSELLQMDFRSQFLTLDQDRLIQLHNAEFIFAEYSRK 118
Query: 116 TITLVIT--GMGDVLEPENGVMAIGSGGSYALSAA-----RALMSTQNSAEEIARKAMSI 168
L ++ G + + V G +YAL + L A ++ +A+ +
Sbjct: 119 PELLHLSVFGSPEWITQRPFVAGNGDLFAYALLSKYQPQHLKLEQATLLAYKVVEEAIEV 178
Query: 169 AA 170
A
Sbjct: 179 GA 180
>gi|297844202|ref|XP_002889982.1| hypothetical protein ARALYDRAFT_471459 [Arabidopsis lyrata subsp.
lyrata]
gi|297335824|gb|EFH66241.1| hypothetical protein ARALYDRAFT_471459 [Arabidopsis lyrata subsp.
lyrata]
Length = 274
Score = 34.3 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 29/172 (16%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
TT L G V++A D + S+G + + +K+ + ++ AG +AD
Sbjct: 56 KGTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHR 114
Query: 74 RLEKKLEQYP-NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL----VITGMGDV- 127
L K + R SV A L A +L + + + L +I G +
Sbjct: 115 NLGIKCRLHELANKRRISVSGA---------SKLLANMLYSYRGMGLSVGTMIAGWDETG 165
Query: 128 -----LEPENGVM-----AIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
++ E G + ++GSG YA + S A E+AR+++
Sbjct: 166 PGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSI 217
>gi|971309|dbj|BAA07954.1| low molecular mass protein-7 (LMP-7) homolog [Xenopus laevis]
Length = 271
Score = 34.3 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 59/158 (37%), Gaps = 12/158 (7%)
Query: 12 KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
H TT L + V++A D + S G + A KV + ++ +GS+AD
Sbjct: 63 PWHGTTTLAFKFKHGVIVAVDSRASAGSYIASLKANKVIEINPY-LLGTMSGSAADCQHW 121
Query: 72 LERLEKKLEQYP-NQLLRSSVELAKDWRMDKYLR------NLEAMILIADKT--ITLVIT 122
L K+ Y R SV A + L+ ++ +MI DK +
Sbjct: 122 ERLLAKECRLYQLRNNSRISVSSASKLLCNMMLQYRGSGLSVGSMICGWDKKGPGLYYVD 181
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
G L + + GSG SYA + + EE
Sbjct: 182 DNGTRL--CGDIFSTGSGNSYAYGVMDSGYRFDLTPEE 217
>gi|195403133|ref|XP_002060149.1| Pros28.1 [Drosophila virilis]
gi|194140993|gb|EDW57419.1| Pros28.1 [Drosophila virilis]
Length = 249
Score = 34.3 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 18/81 (22%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK------VRRL--GKGNIIAGFAGSS 65
+T + VR VV+ V K + K VR++ +++ FAG +
Sbjct: 30 KGSTAVGVRGGNCVVLG----------VEKKSVAKLQEDRTVRKICVLDHHVVMAFAGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQL 86
ADA L+ R + + + + +
Sbjct: 80 ADARILINRAQVECQSHRLNV 100
>gi|19528159|gb|AAL90194.1| AT26889p [Drosophila melanogaster]
Length = 252
Score = 34.3 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 18/83 (21%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANA------RKVRRL--GKGNIIAGFAGSS 65
+T++ +R + +VI V K + R VR++ +++ F+G +
Sbjct: 30 RGSTVMGLRTNNAIVIG----------VEKRSVGDLQEERMVRKICMLDDHVVMTFSGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQLLR 88
ADA L+ R + + + + +
Sbjct: 80 ADARILVSRAQMEAQSHRLNFEK 102
>gi|301781286|ref|XP_002926066.1| PREDICTED: proteasome subunit beta type-11-like [Ailuropoda
melanoleuca]
Length = 291
Score = 34.3 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
H H TT L R V+ A D + S G V +RK+ + + +++ +G+SA
Sbjct: 41 SHGPGLAHGTTTLAFRFRHGVIAAADTRSSCGNYVQCPASRKIIPVHQ-HLLGTTSGTSA 99
Query: 67 DAFT 70
D T
Sbjct: 100 DCAT 103
>gi|281343379|gb|EFB18963.1| hypothetical protein PANDA_015662 [Ailuropoda melanoleuca]
Length = 256
Score = 34.3 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
H H TT L R V+ A D + S G V +RK+ + + +++ +G+SA
Sbjct: 41 SHGPGLAHGTTTLAFRFRHGVIAAADTRSSCGNYVQCPASRKIIPVHQ-HLLGTTSGTSA 99
Query: 67 DAFT 70
D T
Sbjct: 100 DCAT 103
>gi|195027377|ref|XP_001986559.1| GH20460 [Drosophila grimshawi]
gi|193902559|gb|EDW01426.1| GH20460 [Drosophila grimshawi]
Length = 280
Score = 34.3 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
H TT L + G V++A D + + GQ + +K+ + ++ AG +AD
Sbjct: 72 HGTTTLGFKYQGGVILAVDSRATGGQYIGSQTMKKIVEI-NQFLLGTLAGGAADCV 126
>gi|10803370|emb|CAC13117.1| low molecular mass polypeptide subunit PSMB8 [Takifugu rubripes]
Length = 272
Score = 34.3 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + V++A D + S G+ + +A+KV + ++ +GS+AD E
Sbjct: 70 HGTTTLAFKFKHGVIVAVDSRASAGKYISSQDAKKVIEI-NSYLLGTMSGSAADCM-YWE 127
Query: 74 RLEKK 78
RL K
Sbjct: 128 RLLAK 132
>gi|8671510|dbj|BAA96838.1| beta 5 subunit of 20S proteasome [Oryza sativa Japonica Group]
Length = 277
Score = 34.3 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
TT L D V++A D + S+G + RK+ + ++ AG +AD
Sbjct: 59 KGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADC 112
>gi|222634976|gb|EEE65108.1| hypothetical protein OsJ_20167 [Oryza sativa Japonica Group]
Length = 277
Score = 34.3 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
TT L D V++A D + S+G + RK+ + ++ AG +AD
Sbjct: 59 KGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADC 112
>gi|195498293|ref|XP_002096460.1| GE25043 [Drosophila yakuba]
gi|194182561|gb|EDW96172.1| GE25043 [Drosophila yakuba]
Length = 251
Score = 34.3 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 18/85 (21%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK------VRRLG--KGNIIAGFAGSS 65
+T + VR VV+ V K++ K VR++ ++ FAG +
Sbjct: 30 KGSTAVGVRGANCVVLG----------VEKSSVSKMQEYRTVRKITMLDNHVALAFAGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQLLRSS 90
ADA L+ R + + + + +
Sbjct: 80 ADARILINRGQVECQSHRLNFENAV 104
>gi|115466486|ref|NP_001056842.1| Os06g0153800 [Oryza sativa Japonica Group]
gi|55297435|dbj|BAD69286.1| beta 5 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113594882|dbj|BAF18756.1| Os06g0153800 [Oryza sativa Japonica Group]
gi|215737492|dbj|BAG96622.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737619|dbj|BAG96749.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 277
Score = 34.3 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
TT L D V++A D + S+G + RK+ + ++ AG +AD
Sbjct: 59 KGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADC 112
>gi|147898759|ref|NP_001079861.1| proteasome (prosome, macropain) subunit, beta type, 7, gene 2
[Xenopus laevis]
gi|33417116|gb|AAH56039.1| MGC68991 protein [Xenopus laevis]
Length = 279
Score = 34.3 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 65/175 (37%), Gaps = 25/175 (14%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + V++ D + + V N K+ + G AG +ADA + +
Sbjct: 44 GTTIAGIIYKDGVILGADRRATDDMVVADKNCAKIHYITDNIYCCG-AGVAADAENVTQL 102
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI-TLVITGMGDVLEPE-- 131
L L + ++ + R+ R L+ M+ I +I G D+ P
Sbjct: 103 LSSNLHIH-------AMSTGRQPRVCTANRILKQMLYRYQGHIGASIIVGGVDIKGPHLY 155
Query: 132 --------NGV--MAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
+ V A+GSG + A++ EE + +A++ A +C
Sbjct: 156 SIYPHGSTDAVPFTALGSGSAAAIAVLEDRFKPNMELEEGKRLVTEAIT-AGIMC 209
>gi|19922898|ref|NP_611920.1| proteasome 28kD subunit 1B [Drosophila melanogaster]
gi|12643242|sp|Q27575|PSA73_DROME RecName: Full=Proteasome subunit alpha type-7-1B; AltName:
Full=Testis-specific alpha4-t2 proteasome subunit;
AltName: Full=Testis-specific proteasome 28 kDa subunit
1B
gi|7291795|gb|AAF47215.1| proteasome 28kD subunit 1B [Drosophila melanogaster]
gi|46254512|gb|AAS86229.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
melanogaster]
gi|46254514|gb|AAS86230.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
melanogaster]
gi|46254516|gb|AAS86231.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
melanogaster]
gi|46254518|gb|AAS86232.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
melanogaster]
gi|46254520|gb|AAS86233.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
melanogaster]
gi|46254522|gb|AAS86234.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
melanogaster]
gi|46254524|gb|AAS86235.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
melanogaster]
Length = 252
Score = 34.3 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 18/83 (21%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANA------RKVRRL--GKGNIIAGFAGSS 65
+T++ +R + +VI V K + R VR++ +++ F+G +
Sbjct: 30 RGSTVMGLRTNNAIVIG----------VEKRSVGDLQEERMVRKICMLDDHVVMTFSGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQLLR 88
ADA L+ R + + + + +
Sbjct: 80 ADARILVSRAQMEAQSHRLNFEK 102
>gi|224014134|ref|XP_002296730.1| 26S proteasome beta type 7 subunit [Thalassiosira pseudonana
CCMP1335]
gi|220968585|gb|EED86931.1| 26S proteasome beta type 7 subunit [Thalassiosira pseudonana
CCMP1335]
Length = 296
Score = 34.3 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI+ + G +V+ D + + TV N K+ + G AG++AD E
Sbjct: 52 GTTIVGLVYPGGIVLGADTRSTNDTTVADKNCEKIHYIAPNIYCCG-AGTAADTEKSTEL 110
Query: 75 LEKKLE 80
+ ++E
Sbjct: 111 ISSQME 116
>gi|195340520|ref|XP_002036861.1| GM12440 [Drosophila sechellia]
gi|194130977|gb|EDW53020.1| GM12440 [Drosophila sechellia]
Length = 307
Score = 34.3 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + V++ D + + G V N K+ L G AG++AD +
Sbjct: 48 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCG-AGTAADTEMITLT 106
Query: 75 LEKKLEQYPNQLLR 88
+L+ + R
Sbjct: 107 TSAELDLHRLNTER 120
>gi|218197607|gb|EEC80034.1| hypothetical protein OsI_21721 [Oryza sativa Indica Group]
Length = 277
Score = 34.3 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
TT L D V++A D + S+G + RK+ + ++ AG +AD
Sbjct: 59 KGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADC 112
>gi|57231694|gb|AAW47560.1| proteasome 28kD subunit 1 [Drosophila ezoana]
gi|156536449|gb|ABU80379.1| proteasome 28kD subunit 1 [Drosophila montana]
Length = 224
Score = 34.3 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 18/81 (22%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK------VRRL--GKGNIIAGFAGSS 65
+T + VR VV+ V K + K VR++ +++ FAG +
Sbjct: 17 KGSTAVGVRGGNCVVLG----------VEKKSVAKLQEDRTVRKICVLDHHVVMAFAGLT 66
Query: 66 ADAFTLLERLEKKLEQYPNQL 86
ADA L+ R + + + + +
Sbjct: 67 ADARILINRAQVECQSHRLNV 87
>gi|332643799|gb|AEE77320.1| proteasome subunit beta type-7-A [Arabidopsis thaliana]
Length = 267
Score = 34.3 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 7/74 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTI------DGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 91
Query: 75 LEKKLEQYPNQLLR 88
+ +L + Q R
Sbjct: 92 VSSQLRLHRYQTGR 105
>gi|312377363|gb|EFR24207.1| hypothetical protein AND_11358 [Anopheles darlingi]
Length = 193
Score = 34.3 bits (78), Expect = 8.7, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 18/81 (22%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK------VRR--LGKGNIIAGFAGSS 65
+T + VR VVV+ V K + K VR+ L +++ FAG +
Sbjct: 30 KGSTAIGVRGKDVVVLG----------VEKKSVAKLQEERTVRKICLLDHHVVMAFAGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQL 86
ADA L+ R + + + + +
Sbjct: 80 ADARVLINRAQVECQSHKLNV 100
>gi|29726328|pdb|1J2Q|H Chain H, 20s Proteasome In Complex With Calpain-Inhibitor I From
Archaeoglobus Fulgidus
gi|29726329|pdb|1J2Q|I Chain I, 20s Proteasome In Complex With Calpain-Inhibitor I From
Archaeoglobus Fulgidus
gi|29726330|pdb|1J2Q|J Chain J, 20s Proteasome In Complex With Calpain-Inhibitor I From
Archaeoglobus Fulgidus
gi|29726331|pdb|1J2Q|K Chain K, 20s Proteasome In Complex With Calpain-Inhibitor I From
Archaeoglobus Fulgidus
gi|29726332|pdb|1J2Q|L Chain L, 20s Proteasome In Complex With Calpain-Inhibitor I From
Archaeoglobus Fulgidus
gi|29726333|pdb|1J2Q|M Chain M, 20s Proteasome In Complex With Calpain-Inhibitor I From
Archaeoglobus Fulgidus
gi|29726334|pdb|1J2Q|N Chain N, 20s Proteasome In Complex With Calpain-Inhibitor I From
Archaeoglobus Fulgidus
Length = 202
Score = 34.3 bits (78), Expect = 8.7, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 20/165 (12%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL---- 71
TT+ V KDG VV+A + + ++G + A+K+ ++ + AGS DA L
Sbjct: 2 TTVGLVCKDG-VVMATEKRATMGNFIASKAAKKIYQIA-DRMAMTTAGSVGDAQFLARII 59
Query: 72 ---LERLEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTITLVITGM 124
E + E+ P +R+ L + +R YL L + ++ I +
Sbjct: 60 KIEANLYEIRRERKPT--VRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSIDPI 117
Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
G +E E ++A GSG A ++ + + E +A+ +A
Sbjct: 118 GGAIE-EKDIVATGSGSLTAY----GVLEDRFTPEIGVDEAVELA 157
>gi|119872266|ref|YP_930273.1| proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
gi|302595707|sp|A1RSJ8|PSB1_PYRIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119673674|gb|ABL87930.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
Length = 203
Score = 34.3 bits (78), Expect = 8.7, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 15/167 (8%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T + ++ VV+A + +VS G + + +KV + + AG AD TL
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKV-FIINDKLAIASAGIIADMQTLARI 66
Query: 75 LEKKLEQYPNQLLR--SSVELAKDWRMDKYLRNL-----EAMILIADKT--ITLVITGMG 125
L+ + Y ++ + + +AK + + R L E ++ D+ +V+ +G
Sbjct: 67 LKLNVMSYELEVRKKPTVRAMAKLLSIIMFSRRLLPFYAEVLVGGVDEEGPHLIVMDPLG 126
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
++E + A+G+G A+S A S A+++A +A+ A
Sbjct: 127 SLIE--DNYAALGTGAKLAVSLLDATYRPDISLQEAKKLAVQAIKAA 171
>gi|260803067|ref|XP_002596413.1| hypothetical protein BRAFLDRAFT_114302 [Branchiostoma floridae]
gi|229281668|gb|EEN52425.1| hypothetical protein BRAFLDRAFT_114302 [Branchiostoma floridae]
Length = 276
Score = 34.3 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI + V++ D + + V N K+ + G AG++AD +
Sbjct: 41 GTTIAGIIFKDGVILGADTRATEDTIVADKNCSKIHFIAPNIYCCG-AGTAADTEMTTQM 99
Query: 75 LEKKLEQYP 83
+ LE +
Sbjct: 100 ISSNLELHR 108
>gi|119872605|ref|YP_930612.1| proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
gi|302595721|sp|A1RTI7|PSB2_PYRIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119674013|gb|ABL88269.1| archaean proteasome, beta component. Threonine peptidase. MEROPS
family T01A [Pyrobaculum islandicum DSM 4184]
Length = 200
Score = 34.3 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 64/162 (39%), Gaps = 13/162 (8%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TT + + VV+A D +V+ G + K+ ++ ++ A +G AD +LL L
Sbjct: 2 TTTVGIAVKEGVVLATDKRVTAGYYIAHKQGEKIWKI-DDHVAATMSGGVADLQSLLSFL 60
Query: 76 -----EKKLEQYPNQLLRSSVELAK--DWRMDKYLRNLEAMILIADKTI---TLVITGMG 125
E K+E +R+ V + Y+ + ++I D+ ++ +G
Sbjct: 61 TLRAREYKIEYKRPIPIRALVNYVSLILFYSRPYIYLVHSIIGGVDREEGAVLYMVDWLG 120
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
V +A GSG YA A S E+ A+
Sbjct: 121 TVTR--ERYIATGSGSPYAKGALEVGYREDMSLEDAVDLAIR 160
>gi|57231588|gb|AAW47507.1| proteasome 28kD subunit 1 [Drosophila virilis]
gi|57231590|gb|AAW47508.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231592|gb|AAW47509.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231594|gb|AAW47510.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231596|gb|AAW47511.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231598|gb|AAW47512.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231600|gb|AAW47513.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231602|gb|AAW47514.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231604|gb|AAW47515.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231606|gb|AAW47516.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231608|gb|AAW47517.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231610|gb|AAW47518.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231612|gb|AAW47519.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231614|gb|AAW47520.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231616|gb|AAW47521.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231618|gb|AAW47522.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231620|gb|AAW47523.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231622|gb|AAW47524.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231624|gb|AAW47525.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231626|gb|AAW47526.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231628|gb|AAW47527.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231630|gb|AAW47528.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231632|gb|AAW47529.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231634|gb|AAW47530.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231636|gb|AAW47531.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231638|gb|AAW47532.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231640|gb|AAW47533.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231642|gb|AAW47534.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231644|gb|AAW47535.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231646|gb|AAW47536.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231648|gb|AAW47537.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231650|gb|AAW47538.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231652|gb|AAW47539.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231654|gb|AAW47540.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231656|gb|AAW47541.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231658|gb|AAW47542.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231660|gb|AAW47543.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231662|gb|AAW47544.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231664|gb|AAW47545.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231666|gb|AAW47546.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231668|gb|AAW47547.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231670|gb|AAW47548.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231672|gb|AAW47549.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231674|gb|AAW47550.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231676|gb|AAW47551.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231678|gb|AAW47552.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231680|gb|AAW47553.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231682|gb|AAW47554.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231684|gb|AAW47555.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231686|gb|AAW47556.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231688|gb|AAW47557.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231690|gb|AAW47558.1| proteasome 28kD subunit 1 [Drosophila americana]
gi|57231692|gb|AAW47559.1| proteasome 28kD subunit 1 [Drosophila americana]
Length = 224
Score = 34.3 bits (78), Expect = 8.8, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 18/81 (22%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK------VRRL--GKGNIIAGFAGSS 65
+T + VR VV+ V K + K VR++ +++ FAG +
Sbjct: 17 KGSTAVGVRGGNCVVLG----------VEKKSVAKLQEDRTVRKICVLDHHVVMAFAGLT 66
Query: 66 ADAFTLLERLEKKLEQYPNQL 86
ADA L+ R + + + + +
Sbjct: 67 ADARILINRAQVECQSHRLNV 87
>gi|315518862|dbj|BAJ51760.1| proteasome subunit, beta type 10 [Oryzias celebensis]
Length = 261
Score = 34.3 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 32/187 (17%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V VV+ D + + + V K+ + G AG++AD +
Sbjct: 27 GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 85
Query: 75 LEKKLEQYPNQLLRS-----SVELAKDWRMDKYLRNLEAMILI----ADKTITLVITGMG 125
L L + R+ +V + +D + +Y + A +++ + G
Sbjct: 86 LSSNLTVFSLNSGRNPRIVMAVNILQD-MLYRYHGQIGANLILGGVDCTGNHLYTVGPYG 144
Query: 126 DVLEPENGV--MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA---------- 170
V N V +A+GSG AL A+E+ R A+ A
Sbjct: 145 SV----NKVPYLAMGSGDLAALGILEDGFKHGLELEKAKELVRDAIH-AGIMSDLGSGNN 199
Query: 171 -DICVYT 176
DICV T
Sbjct: 200 IDICVIT 206
>gi|170089877|ref|XP_001876161.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164649421|gb|EDR13663.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 249
Score = 34.3 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
TIL + VIAGD + S G ++ A KV RL ++A GFA AD +
Sbjct: 17 GGTILAIAGADFSVIAGDTRQSEGYSIQTRYAPKVFRLTDKAVLAVNGFA---ADGNMFV 73
Query: 73 ERLEKKLEQYP 83
+++ ++LE Y
Sbjct: 74 KKVRQRLEWYR 84
>gi|121704393|ref|XP_001270460.1| glycosyl hydrolase family 88, putative [Aspergillus clavatus NRRL
1]
gi|119398605|gb|EAW09034.1| glycosyl hydrolase family 88, putative [Aspergillus clavatus NRRL
1]
Length = 451
Score = 34.3 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
+ G G+ + P +G++ + G + + A+ + AEEIAR
Sbjct: 36 VIGRGEGINPADGLLGVIQKGLFQQALRAAIAQSS-DAEEIAR 77
>gi|195382663|ref|XP_002050049.1| GJ21921 [Drosophila virilis]
gi|194144846|gb|EDW61242.1| GJ21921 [Drosophila virilis]
Length = 279
Score = 34.3 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
H TT L + G V++A D + + GQ + + +K+ + ++ AG +AD
Sbjct: 72 HGTTTLGFKYQGGVILAVDSRATGGQYIGSQSMKKIVEI-NQFLLGTLAGGAADCV 126
>gi|46254510|gb|AAS86228.1| testes-specific alpha4-t2 proteasome subunit [Drosophila simulans]
gi|46254526|gb|AAS86236.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
mauritiana]
gi|46254530|gb|AAS86238.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
mauritiana]
gi|46254532|gb|AAS86239.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
mauritiana]
Length = 252
Score = 34.3 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 36/83 (43%), Gaps = 18/83 (21%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANA------RKVRRL--GKGNIIAGFAGSS 65
+T++ +R + +V+ V K + R VR++ +++ F+G +
Sbjct: 30 RGSTVVGLRTNNAIVLG----------VEKRSVGDLQEERMVRKICMLDDHVVMTFSGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQLLR 88
ADA L+ R + + + + +
Sbjct: 80 ADARILVSRAQMEAQSHRLNFEK 102
>gi|238578402|ref|XP_002388706.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
gi|215450229|gb|EEB89636.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
Length = 165
Score = 34.3 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
TIL + VIAGD + S G ++ A KV RL ++A GFA AD +
Sbjct: 22 GGTILAIGGANFSVIAGDTRQSEGYSIQTRYAPKVFRLTDKAVLAVNGFA---ADGNMFV 78
Query: 73 ERLEKKLEQYP 83
+++ ++LE Y
Sbjct: 79 KKVRQRLEWYR 89
>gi|156536447|gb|ABU80378.1| proteasome 28kD subunit 1 [Drosophila littoralis]
Length = 224
Score = 34.3 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 18/81 (22%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK------VRRL--GKGNIIAGFAGSS 65
+T + VR VV+ V K + K VR++ +++ FAG +
Sbjct: 17 KGSTAVGVRGGNCVVLG----------VEKKSVAKLQEDRTVRKICVLDHHVVMAFAGLT 66
Query: 66 ADAFTLLERLEKKLEQYPNQL 86
ADA L+ R + + + + +
Sbjct: 67 ADARILINRAQVECQSHRLNV 87
>gi|71005512|ref|XP_757422.1| hypothetical protein UM01275.1 [Ustilago maydis 521]
gi|46096905|gb|EAK82138.1| hypothetical protein UM01275.1 [Ustilago maydis 521]
Length = 222
Score = 34.3 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 28/146 (19%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V D V++ D + ++G + K+ L I +GS+AD + +
Sbjct: 20 GTSIMAVAYDKGVILGADSRTTMGSYIANRVTDKLTHLS-DRIYCCRSGSAADTQAIADI 78
Query: 75 LEKKLEQY------------PNQLLRSSVELAKDWRMDKYLRNLEAMILIA-----DKTI 117
+ L+ Y L + V KD L A I++A D
Sbjct: 79 VTYYLDMYAVESDSPPQTKVAANLFQEIVYQNKD--------RLSAGIIVAGWDKKDGGR 130
Query: 118 TLVITGMGDVLEPENGVMAIGSGGSY 143
+ G V E GSG +Y
Sbjct: 131 VFNVPLGGGVFE--QPWAIGGSGSTY 154
>gi|332007186|gb|AED94569.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
Length = 268
Score = 34.3 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 7/74 (9%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TTI V++ D + + G V N K+ + G AG++AD + +
Sbjct: 39 GTTI------DGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 91
Query: 75 LEKKLEQYPNQLLR 88
+ +L + Q R
Sbjct: 92 VSSQLRLHRYQTGR 105
>gi|239782090|pdb|3H4P|AA Chain a, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782091|pdb|3H4P|BB Chain b, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782092|pdb|3H4P|CC Chain c, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782093|pdb|3H4P|DD Chain d, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782094|pdb|3H4P|EE Chain e, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782095|pdb|3H4P|FF Chain f, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782096|pdb|3H4P|GG Chain g, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782104|pdb|3H4P|HH Chain h, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782105|pdb|3H4P|II Chain i, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782106|pdb|3H4P|JJ Chain j, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782107|pdb|3H4P|KK Chain k, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782108|pdb|3H4P|LL Chain l, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782109|pdb|3H4P|MM Chain m, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782110|pdb|3H4P|NN Chain n, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 219
Score = 34.3 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 66/176 (37%), Gaps = 40/176 (22%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TT + + D V++A D + SLG V A+K+ ++ I AGS DA ++ L
Sbjct: 2 TTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKI-DDYIAMTIAGSVGDAQAIVRLL 60
Query: 76 --EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT--------LVITGMG 125
E KL + R + + L L+++ + +I G
Sbjct: 61 IAEAKLYKM---------------RTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGY 105
Query: 126 DVLE--------PENGV------MAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
D+LE P G+ A GSG A A S EE + A++
Sbjct: 106 DLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALN 161
>gi|195447436|ref|XP_002071213.1| GK25669 [Drosophila willistoni]
gi|194167298|gb|EDW82199.1| GK25669 [Drosophila willistoni]
Length = 249
Score = 34.3 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTL 71
+T + VR VV+ V V R VR++ +++ FAG +ADA L
Sbjct: 30 KGSTAVGVRGGNCVVLG----VEKKSMVKLQEDRTVRKICMLDSHVVMAFAGLTADARIL 85
Query: 72 LERLEKKLEQYPNQL 86
+ R + + + + +
Sbjct: 86 INRAQVECQSHRLNV 100
>gi|18124203|gb|AAL59862.1|AF363583_1 proteasome beta-subunit LMP7 [Heterodontus francisci]
Length = 276
Score = 34.3 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
H TT L + + V++A D + S G + +A KV + ++ +GS+AD
Sbjct: 67 HGTTTLAFKFEHGVIVAVDSRASAGNFLASGDANKVIEINPY-LLGTMSGSAADCQYWER 125
Query: 74 RLEKKLEQYP 83
L K+ Y
Sbjct: 126 LLAKQCRLYK 135
>gi|24664391|ref|NP_524076.2| proteasome beta2 subunit [Drosophila melanogaster]
gi|7294336|gb|AAF49685.1| proteasome beta2 subunit [Drosophila melanogaster]
gi|15292263|gb|AAK93400.1| LD44234p [Drosophila melanogaster]
gi|220947342|gb|ACL86214.1| Prosbeta2-PA [synthetic construct]
gi|220956886|gb|ACL90986.1| Prosbeta2-PA [synthetic construct]
Length = 272
Score = 34.3 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 34/183 (18%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
I+ + V++ D + + G V N K+ L K G AG++AD + +
Sbjct: 42 IVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEMTTDLISS 100
Query: 78 KLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILI--ADKT--ITLVI--TGMGD 126
+LE + Q R ++ + K + +Y ++ A +++ DKT I G D
Sbjct: 101 QLELHRLQTDREVRVVAANTMLKQ-MLFRYQGHISAALVLGGVDKTGPHIYSIHPHGSSD 159
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAA------------D 171
L +GSG A++ + S EE + R A IA+ D
Sbjct: 160 KL----PYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDA--IASGVFNDLGSGSNID 213
Query: 172 ICV 174
+CV
Sbjct: 214 LCV 216
>gi|149245900|ref|XP_001527420.1| proteasome component PRE3 precursor [Lodderomyces elongisporus
NRRL YB-4239]
gi|146449814|gb|EDK44070.1| proteasome component PRE3 precursor [Lodderomyces elongisporus
NRRL YB-4239]
Length = 223
Score = 34.3 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ V V++ D + + G + K+ ++ I +GS+AD + +
Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGSYIANRVTDKLTQI-HDTIYCCRSGSAADTQAVADM 77
Query: 75 LEKKLEQYPNQLL 87
++ L+ Y QL
Sbjct: 78 VKYYLQIYSAQLP 90
>gi|195353149|ref|XP_002043068.1| Pros28.1B [Drosophila sechellia]
gi|46254534|gb|AAS86240.1| testes-specific alpha4-t2 proteasome subunit [Drosophila sechellia]
gi|194127156|gb|EDW49199.1| Pros28.1B [Drosophila sechellia]
Length = 252
Score = 34.3 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 36/83 (43%), Gaps = 18/83 (21%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANA------RKVRRL--GKGNIIAGFAGSS 65
+T++ +R + +V+ V K + R VR++ +++ F+G +
Sbjct: 30 RGSTVVGLRTNNAIVLG----------VEKRSVGDLQEERMVRKICMLDDHVVMTFSGLT 79
Query: 66 ADAFTLLERLEKKLEQYPNQLLR 88
ADA L+ R + + + + +
Sbjct: 80 ADARILVSRAQMEAQSHRLNFEK 102
>gi|194871052|ref|XP_001972776.1| GG15711 [Drosophila erecta]
gi|190654559|gb|EDV51802.1| GG15711 [Drosophila erecta]
Length = 272
Score = 34.3 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
I+ + V++ D + + G V N K+ L K G AG++AD + +
Sbjct: 42 IVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEMTTDLISS 100
Query: 78 KLEQYPNQLLR 88
+LE + Q R
Sbjct: 101 QLELHRLQTER 111
>gi|634095|emb|CAA58746.1| D13094 [Schizosaccharomyces pombe]
Length = 147
Score = 34.3 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
H TT L R +V+ D + S G + +KV + ++ AG +AD
Sbjct: 3 HGTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPY-LLGTLAGGAADC 56
>gi|325968211|ref|YP_004244403.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia
768-28]
gi|323707414|gb|ADY00901.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia
768-28]
Length = 219
Score = 34.3 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 1 MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIA 59
M+ +++ M TT + + + VV+A D +V+ G + + K+ ++ +I A
Sbjct: 4 MISNNNENLTRLMTGTTTVGIVINDGVVLATDRRVTAGYYIAHRKKGVKIWKI-DNHIAA 62
Query: 60 GFAGSSADAFTLLERLEKKLEQYP 83
+G AD +L+ L QY
Sbjct: 63 TMSGGVADLQKVLDSLTATAIQYK 86
>gi|195590348|ref|XP_002084908.1| GD14518 [Drosophila simulans]
gi|194196917|gb|EDX10493.1| GD14518 [Drosophila simulans]
Length = 272
Score = 33.9 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 34/183 (18%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
I+ + V++ D + + G V N K+ L K G AG++AD + +
Sbjct: 42 IVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEMTTDLISS 100
Query: 78 KLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILI--ADKT--ITLVI--TGMGD 126
+LE + Q R ++ + K + +Y ++ A +++ DKT I G D
Sbjct: 101 QLELHRLQTDREVRVVAANTMLKQ-MLFRYQGHISAALVLGGVDKTGPHIYSIHPHGSSD 159
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAA------------D 171
L +GSG A++ + S EE + R A IA+ D
Sbjct: 160 KL----PYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDA--IASGVFNDLGSGSNID 213
Query: 172 ICV 174
+CV
Sbjct: 214 LCV 216
>gi|118786445|ref|XP_315431.3| AGAP005423-PA [Anopheles gambiae str. PEST]
gi|116126325|gb|EAA11369.3| AGAP005423-PA [Anopheles gambiae str. PEST]
Length = 249
Score = 33.9 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 18/78 (23%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK------VRR--LGKGNIIAGFAGSS 65
+T + VR VVV+ V K + K VR+ L +++ FAG +
Sbjct: 30 KGSTAIGVRGKDVVVLG----------VEKKSVAKLQEERTVRKICLLDHHVVMAFAGLT 79
Query: 66 ADAFTLLERLEKKLEQYP 83
ADA L+ R + + + +
Sbjct: 80 ADARVLINRAQVQCQSHK 97
>gi|194353132|emb|CAQ53358.1| CG18341-PA [Drosophila melanogaster]
Length = 307
Score = 33.9 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + V++ D + + G V N K+ L G AG++AD +
Sbjct: 48 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCG-AGTAADTEMITLT 106
Query: 75 LEKKLEQYPNQLLR 88
+L+ + R
Sbjct: 107 TSAELDLHRLNTER 120
>gi|170061479|ref|XP_001866250.1| proteasome subunit beta type 5,8 [Culex quinquefasciatus]
gi|167879714|gb|EDS43097.1| proteasome subunit beta type 5,8 [Culex quinquefasciatus]
Length = 264
Score = 33.9 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
H TT L+ R G V++A D + + GQ + +K+ + ++ A +AD
Sbjct: 33 HGTTTLSFRFQGEVIVAVDSRATGGQFIGSQTIKKIVEI-NEYLLGTLADGAAD 85
>gi|28317309|gb|AAO39651.1| AT12292p [Drosophila melanogaster]
Length = 308
Score = 33.9 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + V++ D + + G V N K+ L G AG++AD +
Sbjct: 49 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCG-AGTAADTEMITLT 107
Query: 75 LEKKLEQYPNQLLR 88
+L+ + R
Sbjct: 108 TSAELDLHRLNTER 121
>gi|24639979|ref|NP_572267.1| proteasome beta2R1 subunit [Drosophila melanogaster]
gi|7290639|gb|AAF46088.1| proteasome beta2R1 subunit [Drosophila melanogaster]
gi|194353118|emb|CAQ53351.1| CG18341-PA [Drosophila melanogaster]
gi|194353120|emb|CAQ53352.1| CG18341-PA [Drosophila melanogaster]
gi|194353122|emb|CAQ53353.1| CG18341-PA [Drosophila melanogaster]
gi|194353124|emb|CAQ53354.1| CG18341-PA [Drosophila melanogaster]
gi|194353126|emb|CAQ53355.1| CG18341-PA [Drosophila melanogaster]
gi|194353128|emb|CAQ53356.1| CG18341-PA [Drosophila melanogaster]
gi|194353130|emb|CAQ53357.1| CG18341-PA [Drosophila melanogaster]
gi|194353134|emb|CAQ53359.1| CG18341-PA [Drosophila melanogaster]
gi|194353136|emb|CAQ53360.1| CG18341-PA [Drosophila melanogaster]
gi|220949894|gb|ACL87490.1| CG18341-PA [synthetic construct]
gi|223968609|emb|CAR94035.1| CG18341-PA [Drosophila melanogaster]
gi|223968611|emb|CAR94036.1| CG18341-PA [Drosophila melanogaster]
gi|223968617|emb|CAR94039.1| CG18341-PA [Drosophila melanogaster]
gi|223968619|emb|CAR94040.1| CG18341-PA [Drosophila melanogaster]
gi|223968621|emb|CAR94041.1| CG18341-PA [Drosophila melanogaster]
gi|223968623|emb|CAR94042.1| CG18341-PA [Drosophila melanogaster]
gi|223968625|emb|CAR94043.1| CG18341-PA [Drosophila melanogaster]
gi|223968627|emb|CAR94044.1| CG18341-PA [Drosophila melanogaster]
Length = 307
Score = 33.9 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
T+I+ + V++ D + + G V N K+ L G AG++AD +
Sbjct: 48 GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCG-AGTAADTEMITLT 106
Query: 75 LEKKLEQYPNQLLR 88
+L+ + R
Sbjct: 107 TSAELDLHRLNTER 120
>gi|145596533|ref|YP_001160830.1| DNA polymerase III, delta prime subunit [Salinispora tropica
CNB-440]
gi|145305870|gb|ABP56452.1| DNA polymerase III, delta prime subunit [Salinispora tropica
CNB-440]
Length = 427
Score = 33.9 bits (77), Expect = 10.0, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 22 RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
R+ GQV + K+ A + +R + AG DA T+ L +E
Sbjct: 315 RRAASAFRGAAGQVKELERRQKSRATRAQRDALDRALVDLAGFYRDALTM--ALGAPVEP 372
Query: 82 YPNQLLRSSVELAKDWRMDKYLRNLEAMIL 111
+ A+ W D LR LEA++
Sbjct: 373 VHTDTATVAGAGARKWEADGALRRLEAVLA 402
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.173 0.578
Lambda K H
0.267 0.0531 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,498,502,416
Number of Sequences: 14124377
Number of extensions: 239879328
Number of successful extensions: 661573
Number of sequences better than 10.0: 2527
Number of HSP's better than 10.0 without gapping: 2640
Number of HSP's successfully gapped in prelim test: 1326
Number of HSP's that attempted gapping in prelim test: 655547
Number of HSP's gapped (non-prelim): 4170
length of query: 190
length of database: 4,842,793,630
effective HSP length: 131
effective length of query: 59
effective length of database: 2,992,500,243
effective search space: 176557514337
effective search space used: 176557514337
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 78 (34.3 bits)