PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1g0u
>gi|11513997|pdb|1G0U|F Chain F, A Gated Channel Into The Proteasome Core Particle Length = 248
>gi|11514011|pdb|1G0U|T Chain T, A Gated Channel Into The Proteasome Core Particle Length = 248
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 56/169 (33%), Gaps = 16/169 (9%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
+ TT + ++ + VV A + ++ V + N + ++ +I ++G D L+
Sbjct: 33 NGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNVKI--QVVDRHIGCVYSGLIPDGRHLVN 90
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
R ++ + A R+ +Y+ + + DK +
Sbjct: 91 RGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKNGAHLYM 150
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSI 168
A G G A + L+ SA E ++A I
Sbjct: 151 LEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPEGLSAREAVKQAAKI 199