PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1g0u
gi|11514004|pdb|1G0U|M Chain M, A Gated Channel Into The Proteasome Core Particle Length = 266
>gi|11514018|pdb|1G0U|1 Chain 1, A Gated Channel Into The Proteasome Core Particle Length = 266
>gi|178847472|pdb|2ZCY|M Chain M, Yeast 20s Proteasome:syringolin A-Complex Length = 266
>gi|178847486|pdb|2ZCY|0 Chain 0, Yeast 20s Proteasome:syringolin A-Complex Length = 266
>gi|178847514|pdb|3BDM|M Chain M, Yeast 20s Proteasome:glidobactin A-Complex Length = 266
>gi|178847528|pdb|3BDM|0 Chain 0, Yeast 20s Proteasome:glidobactin A-Complex Length = 266
>gi|323462948|pdb|3NZJ|M Chain M, Crystal Structure Of Yeast 20s Proteasome In Complex With Ligand 2a Length = 266
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 67/208 (32%), Gaps = 25/208 (12%)
Query: 4 MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
M + + + T++++++ D V+IA D S G + ++ +G ++ G +G
Sbjct: 31 MVNTQQPI-VTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVV-GISG 88
Query: 64 SSADAFTLLERLEKKLEQYPNQLLRS-------SVELAKDWRMDKYLRNLEAMILIADKT 116
+D + L+ + + + + + Y R + L
Sbjct: 89 DISDMQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAII 148
Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN------------SAEEIARK 164
+ V + L N + S + A + + + ++A +
Sbjct: 149 VAGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEE 208
Query: 165 AMSIAA----DICVYTNHNIVLETLKVG 188
A+ A ++ N L +
Sbjct: 209 AIVNAMRVLYYRDARSSRNFSLAIIDKN 236