PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1iru
gi|21465644|pdb|1IRU|C Chain C, Crystal Structure Of The Mammalian 20s Proteasome At 2.75 A Resolution Length = 261
>gi|21465658|pdb|1IRU|Q Chain Q, Crystal Structure Of The Mammalian 20s Proteasome At 2.75 A Resolution Length = 261
Score = 48.8 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
HA T L + + V++A + + + K+ +L + AG +
Sbjct: 30 HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89
Query: 72 LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
L + ++ QL+ + ++ + + R +L +
Sbjct: 90 LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
IG+ + A+S + SA +A K ++ D+ +
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAE 209
Query: 179 NIVLETLKVGD 189
+ + TL +
Sbjct: 210 KVEIATLTREN 220