PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1iru

>gi|21465653|pdb|1IRU|L Chain L, Crystal Structure Of The Mammalian 20s Proteasome At 2.75 A Resolution Length = 204
>gi|21465667|pdb|1IRU|Z Chain Z, Crystal Structure Of The Mammalian 20s Proteasome At 2.75 A Resolution Length = 204
 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 60/177 (33%), Gaps = 11/177 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD       L
Sbjct: 1   TTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWERLL 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVL 128
            ++   Y  +        A    +   +   + M L         DK    +     +  
Sbjct: 60  ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 119

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 120 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNL 176