PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1iru

>gi|21465655|pdb|1IRU|N Chain N, Crystal Structure Of The Mammalian 20s Proteasome At 2.75 A Resolution Length = 219
>gi|21465669|pdb|1IRU|2 Chain 2, Crystal Structure Of The Mammalian 20s Proteasome At 2.75 A Resolution Length = 219
 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 2   QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 59

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 60  FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 119

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A ++  + M +
Sbjct: 120 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRV 175