PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1iru
>gi|21465655|pdb|1IRU|N Chain N, Crystal Structure Of The Mammalian 20s Proteasome At 2.75 A Resolution Length = 219
>gi|21465669|pdb|1IRU|2 Chain 2, Crystal Structure Of The Mammalian 20s Proteasome At 2.75 A Resolution Length = 219
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 17/176 (9%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
+ + T++L V+ +G VVIA D S G N ++ R+ ++ G +G AD
Sbjct: 2 QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 59
Query: 68 AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
L + L E+ L + R+ A R K M++
Sbjct: 60 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 119
Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
+ + + E +A G G A R ++ +Q A ++ + M +
Sbjct: 120 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRV 175