PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1ryp
>gi|3114275|pdb|1RYP|G Chain G, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 244
>gi|3114289|pdb|1RYP|U Chain U, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 244
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 56/169 (33%), Gaps = 16/169 (9%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
+ TT + ++ + VV A + ++ V + N + ++ +I ++G D L+
Sbjct: 29 NGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNVKI--QVVDRHIGCVYSGLIPDGRHLVN 86
Query: 74 RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
R ++ + A R+ +Y+ + + DK +
Sbjct: 87 RGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKNGAHLYM 146
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSI 168
A G G A + L+ SA E ++A I
Sbjct: 147 LEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPEGLSAREAVKQAAKI 195