PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1ryp
>gi|3114281|pdb|1RYP|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 222
>gi|3114295|pdb|1RYP|1 Chain 1, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 222
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/211 (13%), Positives = 63/211 (29%), Gaps = 30/211 (14%)
Query: 7 KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
+ + TIL + + V+AGD + ++ KV G +++ G +A
Sbjct: 1 QFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSA-NGFAA 59
Query: 67 DAFTLLERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADKTITL- 119
D L++R + ++ Y S+ + K +IA
Sbjct: 60 DGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGK 119
Query: 120 --VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----------------NSAEE 160
V + A G+ S + ++ + S EE
Sbjct: 120 GAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEE 179
Query: 161 ---IARKAMSIAADICVYTNHNIVLETLKVG 188
+ R + + A + + + + +
Sbjct: 180 VIKLVRDSFTSATERHIQVGDGLEILIVTKD 210