PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1vsy
>gi|298508225|pdb|1VSY|D Chain D, Proteasome Activator Complex Length = 227
>gi|298508239|pdb|1VSY|R Chain R, Proteasome Activator Complex Length = 227
>gi|298508441|pdb|3L5Q|I Chain I, Proteasome Activator Complex Length = 227
>gi|298508455|pdb|3L5Q|U Chain U, Proteasome Activator Complex Length = 227
Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 19/194 (9%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
T + V+ VV+ + + +L + KV ++ +++ F+G +AD+ L+E
Sbjct: 13 RGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLS-FSGLNADSRILIE 71
Query: 74 RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIAD----KTITLV 120
+ + + + L + + + +R LIA +
Sbjct: 72 KARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKL 131
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTN 177
+ IG + EE + + ++ V T
Sbjct: 132 YQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEV-VQTG 190
Query: 178 H-NIVLETLKVGDE 190
NI + +K +
Sbjct: 191 AKNIEITVVKPDSD 204