RPSBLAST alignment of GI: 254780828 and protein with PDBid: 1iru
>1iru_L 20S proteasome; cell cycle, immune response, proteolysis, ubiquitin, hydrolase; 2.75A {Bos taurus} SCOP: d.153.1.4 Length = 204
Score = 76.3 bits (187), Expect = 4e-15
Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 11/181 (6%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TT L + V++A D + + G + +KV + ++ AG +AD L
Sbjct: 1 TTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINP-YLLGTMAGGAADCSFWERLL 59
Query: 76 EK-----KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
+ +L + ++ +L + L +I DK + +
Sbjct: 60 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 119
Query: 129 EPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
++GSG YA S A ++AR+A+ A Y+ + L +
Sbjct: 120 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 179
Query: 186 K 186
+
Sbjct: 180 R 180