RPSBLAST alignment of GI: 254780828 and protein with PDBid: 1j2q

>1j2q_H Proteasome beta subunit; ubiquitin, CP, hydrolase; HET: CIB; 2.83A {Archaeoglobus fulgidus} SCOP: d.153.1.4 Length = 202

 Score = 68.6 bits (167), Expect = 8e-13
 Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 14/179 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT + +     VV+A + + ++G  +    A+K+ ++    +    AGS  DA  L   +
Sbjct: 1   TTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIAD-RMAMTTAGSVGDAQFLARII 59

Query: 76  EKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           + +   Y  +  R             L   +R   YL  L    + ++      I  +G 
Sbjct: 60  KIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSIDPIGG 119

Query: 127 VLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVL 182
            +E ++ V A GSG   A        +     + A E+A +A+  A      +   I +
Sbjct: 120 AIEEKDIV-ATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDV 177