RPSBLAST alignment of GI: 254780828 and protein with PDBid: 1q5q
>1q5q_A Proteasome alpha-type subunit 1; proteasome assembly, Pro-peptide, inter-subunit contacts, hydrolase; 2.60A {Rhodococcus erythropolis} SCOP: d.153.1.4 PDB: 2h6j_A 1q5r_A Length = 259
Score = 38.8 bits (90), Expect = 7e-04
Identities = 21/184 (11%), Positives = 42/184 (22%), Gaps = 30/184 (16%)
Query: 9 YAVK--MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
A K +++ + V+ + + V + + G
Sbjct: 19 LARKGIARGRSVVVLTFRDGVLFVAENPSTALHKVSELY---------DRLGFAAVGKYN 69
Query: 67 DAFTLLERLEKKLEQY------PNQLLRSSVELAKDWRMDKY---LRNLEAMILIA---- 113
+ L + + RS + + E I +A
Sbjct: 70 EFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFTEQPKPYEVEICVAEVGR 129
Query: 114 ---DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMS 167
K L + E + +G +A R +A IA A+
Sbjct: 130 VGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRADLDLEAAVGIAVNALR 189
Query: 168 IAAD 171
Sbjct: 190 QGGA 193