RPSBLAST alignment of GI: 254780828 and protein with PDBid: 3h4p
>3h4p_a Proteasome subunit beta; core particle, cytoplasm, hydrolase, protease, threonine protease; 4.10A {Methanocaldococcus jannaschii} Length = 219
Score = 64.8 bits (157), Expect = 1e-11
Identities = 43/179 (24%), Positives = 69/179 (38%), Gaps = 13/179 (7%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TT + + D V++A D + SLG V A+K+ ++ I AGS DA ++ L
Sbjct: 2 TTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDD-YIAMTIAGSVGDAQAIVRLL 60
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL---EPEN 132
+ + Y + R+ LA + L + + I G L +P
Sbjct: 61 IAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLG 120
Query: 133 GVM------AIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
G+ A GSG A A S EE +A A+ A + ++ + I L
Sbjct: 121 GMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISL 179