HHsearch alignment for GI: 254780829 and conserved domain: COG2204

>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].

Probab=97.39  E-value=0.00033  Score=46.64  Aligned_cols=41  Identities=27%  Similarity=0.543  Sum_probs=35.8

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHH---CCCEEEEECCCEEEC
Q ss_conf             66866996798886899999999970---787797143410121
Q gi|254780829|r   52 MPKNILLVGPTGVGKTAISRRLARLA---GAPFIKVEVTKFTEI   92 (437)
Q Consensus        52 ~psNiLLiGPtGtGKTlLAktLA~~l---~VPF~~~daT~ftE~   92 (437)
T Consensus       163 s~a~VLI~GESGtGKElvAr~IH~~S~R~~~PFVavNcaAip~~  206 (464)
T COG2204         163 SDASVLITGESGTGKELVARAIHQASPRAKGPFIAVNCAAIPEN  206 (464)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHH
T ss_conf             79978997789875899999998607445899256334648988