HHsearch alignment for GI: 254780829 and conserved domain: COG2812

>COG2812 DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair].
Probab=97.41  E-value=0.00011  Score=49.68  Aligned_cols=48  Identities=35%  Similarity=0.595  Sum_probs=40.0

Q ss_pred             EECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf             0486899999999998778864086444466566866996798886899999999970787
Q gi|254780829|r   20 IIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLAGAP   80 (437)
Q Consensus        20 VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~VP   80 (437)
T Consensus        18 vvGQe~v~~~L~nal~~~-------------ri~hAYlfsG~RGvGKTt~Ari~AkalNC~   65 (515)
T COG2812          18 VVGQEHVVKTLSNALENG-------------RIAHAYLFSGPRGVGKTTIARILAKALNCE   65 (515)
T ss_pred             HCCCHHHHHHHHHHHHHC-------------CCHHHHHHCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             636489999999999808-------------423336513777767104999999995688