HHsearch alignment for GI: 254780829 and conserved domain: PRK06526

>PRK06526 transposase; Provisional.
Probab=98.15  E-value=1.9e-06  Score=61.16  Aligned_cols=40  Identities=25%  Similarity=0.460  Sum_probs=29.0

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHH---CCCEEEEECCCEEE
Q ss_conf             66866996798886899999999970---78779714341012
Q gi|254780829|r   52 MPKNILLVGPTGVGKTAISRRLARLA---GAPFIKVEVTKFTE   91 (437)
Q Consensus        52 ~psNiLLiGPtGtGKTlLAktLA~~l---~VPF~~~daT~ftE   91 (437)
T Consensus        97 ~~~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~~L~~  139 (254)
T PRK06526         97 GKENVVFLGPPGTGKTHLAIGLGIRACQAGHRVLFATAAQWVA  139 (254)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHH
T ss_conf             5887899899998689999999999998699679987799999