HHsearch alignment for GI: 254780829 and conserved domain: PRK06731
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated.
Probab=97.09 E-value=0.0029 Score=40.55 Aligned_cols=27 Identities=44% Similarity=0.589 Sum_probs=19.7
Q ss_pred CCCCCCCEEEECCCCCCHHHHHHHHHH
Q ss_conf 665668669967988868999999999
Q gi|254780829|r 49 DELMPKNILLVGPTGVGKTAISRRLAR 75 (437)
Q Consensus 49 ~e~~psNiLLiGPtGtGKTlLAktLA~ 75 (437)
T Consensus 71 ~~~~~~vI~lvG~~G~GKTTT~AKLA~ 97 (270)
T PRK06731 71 FEKEVQTIALIGPTGVGKTTTLAKMAW 97 (270)
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHH
T ss_conf 679981899988898988999999999